Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
10:28:18 (1685360): wrapper (7.7.26015): starting
10:28:18 (1685360): wrapper: running run_atlas (--nthreads 4)
[2026-03-03 10:28:18] Arguments: --nthreads 4
[2026-03-03 10:28:18] Threads: 4
[2026-03-03 10:28:18] Checking for CVMFS
[2026-03-03 10:28:18] No cvmfs_config command found, will try listing directly
[2026-03-03 10:28:18] CVMFS is ok
[2026-03-03 10:28:18] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-03 10:28:18] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-03 10:28:18] Further information can be found at the LHC@home message board.
[2026-03-03 10:28:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-03 10:28:18] Checking for apptainer binary...
[2026-03-03 10:28:18] which: no apptainer in ((null))
[2026-03-03 10:28:18] apptainer is not installed, using version from CVMFS
[2026-03-03 10:28:18] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-03 10:28:18] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot248/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut22.grid.cesnet.cz
[2026-03-03 10:28:18] apptainer works
[2026-03-03 10:28:18] Set ATHENA_PROC_NUMBER=4
[2026-03-03 10:28:18] Set ATHENA_CORE_NUMBER=4
[2026-03-03 10:28:18] Starting ATLAS job with PandaID=7035824531
[2026-03-03 10:28:18] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot248/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-03 12:23:49]  *** The last 200 lines of the pilot log: ***
[2026-03-03 12:23:49] 2026-03-03 11:23:16,688 | INFO     | sum of deviations: 10932499696.5
[2026-03-03 12:23:49] 2026-03-03 11:23:16,688 | INFO     | mean x: 1772533391.5
[2026-03-03 12:23:49] 2026-03-03 11:23:16,688 | INFO     | mean y: 2331191.4907407407
[2026-03-03 12:23:49] 2026-03-03 11:23:16,688 | INFO     | intersect: -49611349148.56087
[2026-03-03 12:23:49] 2026-03-03 11:23:16,688 | INFO     | chi2: 1.114245427209725
[2026-03-03 12:23:49] 2026-03-03 11:23:16,688 | INFO     | current chi2=1.114245427209725 (change=-0.13113854732237298 %)
[2026-03-03 12:23:49] 2026-03-03 11:23:16,688 | INFO     | right removable region: 107
[2026-03-03 12:23:49] 2026-03-03 11:23:16,688 | INFO     | sum of square deviations: 390582207.0
[2026-03-03 12:23:49] 2026-03-03 11:23:16,689 | INFO     | sum of deviations: -91439335.49999999
[2026-03-03 12:23:49] 2026-03-03 11:23:16,689 | INFO     | mean x: 1772533696.5
[2026-03-03 12:23:49] 2026-03-03 11:23:16,689 | INFO     | mean y: 2362695.3796296297
[2026-03-03 12:23:49] 2026-03-03 11:23:16,689 | INFO     | intersect: 417331171.8092757
[2026-03-03 12:23:49] 2026-03-03 11:23:16,689 | INFO     | chi2: 0.0007526438158637332
[2026-03-03 12:23:49] 2026-03-03 11:23:16,689 | INFO     | current chi2=0.0007526438158637332 (change=99.93236401930608 %)
[2026-03-03 12:23:49] 2026-03-03 11:23:16,689 | INFO     | sum of square deviations: 338804492.0
[2026-03-03 12:23:49] 2026-03-03 11:23:16,689 | INFO     | sum of deviations: -402504229.99999994
[2026-03-03 12:23:49] 2026-03-03 11:23:16,689 | INFO     | mean x: 1772533849.0
[2026-03-03 12:23:49] 2026-03-03 11:23:16,689 | INFO     | mean y: 2363593.3203883497
[2026-03-03 12:23:49] 2026-03-03 11:23:16,689 | INFO     | intersect: 2108157314.7350416
[2026-03-03 12:23:49] 2026-03-03 11:23:16,689 | INFO     | chi2: 0.00013011087744935939
[2026-03-03 12:23:49] 2026-03-03 11:23:16,689 | INFO     | current chi2=0.00013011087744935939 (change=82.7128218279394 %)
[2026-03-03 12:23:49] 2026-03-03 11:23:16,690 | INFO     | sum of square deviations: 291817564.5
[2026-03-03 12:23:49] 2026-03-03 11:23:16,690 | INFO     | sum of deviations: -346180093.5
[2026-03-03 12:23:49] 2026-03-03 11:23:16,690 | INFO     | mean x: 1772534001.5
[2026-03-03 12:23:49] 2026-03-03 11:23:16,690 | INFO     | mean y: 2363410.9285714286
[2026-03-03 12:23:49] 2026-03-03 11:23:16,690 | INFO     | intersect: 2105101768.7877643
[2026-03-03 12:23:49] 2026-03-03 11:23:16,690 | INFO     | chi2: 0.00012903389559112497
[2026-03-03 12:23:49] 2026-03-03 11:23:16,690 | INFO     | current chi2=0.00012903389559112497 (change=0.8277415995857795 %)
[2026-03-03 12:23:49] 2026-03-03 11:23:16,690 | INFO     | left removable region: 30
[2026-03-03 12:23:49] 2026-03-03 11:23:16,690 | INFO     | sum of square deviations: 141539398.0
[2026-03-03 12:23:49] 2026-03-03 11:23:16,690 | INFO     | sum of deviations: -63027273.99999996
[2026-03-03 12:23:49] 2026-03-03 11:23:16,690 | INFO     | mean x: 1772534276.0
[2026-03-03 12:23:49] 2026-03-03 11:23:16,690 | INFO     | mean y: 2362371.1948051946
[2026-03-03 12:23:49] 2026-03-03 11:23:16,690 | INFO     | intersect: 791669130.0651768
[2026-03-03 12:23:49] 2026-03-03 11:23:16,690 | INFO     | chi2: 7.181524146706911e-05
[2026-03-03 12:23:49] 2026-03-03 11:23:16,691 | INFO     | current memory leak: -0.45 B/s (using 77 data points, chi2=0.00)
[2026-03-03 12:23:49] 2026-03-03 11:23:16,691 | INFO     | could have reported an average CPU frequency of 3635 MHz (7 samples)
[2026-03-03 12:23:49] 2026-03-03 11:23:16,691 | INFO     | ..............................
[2026-03-03 12:23:49] 2026-03-03 11:23:16,691 | INFO     | . Timing measurements:
[2026-03-03 12:23:49] 2026-03-03 11:23:16,691 | INFO     | . get job = 0 s
[2026-03-03 12:23:49] 2026-03-03 11:23:16,691 | INFO     | . initial setup = 4 s
[2026-03-03 12:23:49] 2026-03-03 11:23:16,691 | INFO     | . payload setup = 4 s
[2026-03-03 12:23:49] 2026-03-03 11:23:16,691 | INFO     | . stage-in = 0 s
[2026-03-03 12:23:49] 2026-03-03 11:23:16,691 | INFO     | . payload execution = 6866 s
[2026-03-03 12:23:49] 2026-03-03 11:23:16,691 | INFO     | . stage-out = 0 s
[2026-03-03 12:23:49] 2026-03-03 11:23:16,691 | INFO     | . log creation = 0 s
[2026-03-03 12:23:49] 2026-03-03 11:23:16,691 | INFO     | ..............................
[2026-03-03 12:23:49] 2026-03-03 11:23:16,877 | WARNING  | process 1704154 can no longer be monitored (due to stat problems) - aborting
[2026-03-03 12:23:49] 2026-03-03 11:23:16,877 | INFO     | using path: /var/lib/boinc/var/slot248/slots/0/PanDA_Pilot-7035824531/memory_monitor_summary.json (trf name=prmon)
[2026-03-03 12:23:49] 2026-03-03 11:23:16,878 | INFO     | using path: /var/lib/boinc/var/slot248/slots/0/PanDA_Pilot-7035824531/memory_monitor_summary.json (trf name=prmon)
[2026-03-03 12:23:49] 2026-03-03 11:23:16,878 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-03-03 12:23:49] 2026-03-03 11:23:16,878 | WARNING  | maxPSS not found in memory monitor output
[2026-03-03 12:23:49] 2026-03-03 11:23:16,878 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 1920611 B
[2026-03-03 12:23:49] 2026-03-03 11:23:16,878 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 16787 B
[2026-03-03 12:23:49] 2026-03-03 11:23:16,878 | INFO     | executing command: df -mP /var/lib/boinc/var/slot248/slots/0
[2026-03-03 12:23:49] 2026-03-03 11:23:16,896 | INFO     | sufficient remaining disk space (22571646976 B)
[2026-03-03 12:23:49] 2026-03-03 11:23:16,896 | INFO     | work directory size check will use 5033164800 B as a max limit (20% grace limit added, divider=1)
[2026-03-03 12:23:49] 2026-03-03 11:23:16,896 | INFO     | size of work directory /var/lib/boinc/var/slot248/slots/0/PanDA_Pilot-7035824531: 2235123 B (within 5033164800 B limit)
[2026-03-03 12:23:49] 2026-03-03 11:23:16,897 | INFO     | pfn file=/var/lib/boinc/var/slot248/slots/0/PanDA_Pilot-7035824531/HITS.48845809._000001.pool.root.1 does not exist (skip from workdir size calculation)
[2026-03-03 12:23:49] 2026-03-03 11:23:16,897 | INFO     | total size of present files: 0 B (workdir size: 2235123 B)
[2026-03-03 12:23:49] 2026-03-03 11:23:16,897 | INFO     | output file size check: skipping output file /var/lib/boinc/var/slot248/slots/0/PanDA_Pilot-7035824531/HITS.48845809._000001.pool.root.1 since it does not exist
[2026-03-03 12:23:49] 2026-03-03 11:23:16,961 | INFO     | 
[2026-03-03 12:23:49] 2026-03-03 11:23:16,962 | INFO     | job summary report
[2026-03-03 12:23:49] 2026-03-03 11:23:16,962 | INFO     | --------------------------------------------------
[2026-03-03 12:23:49] 2026-03-03 11:23:16,962 | INFO     | PanDA job id: 7035824531
[2026-03-03 12:23:49] 2026-03-03 11:23:16,962 | INFO     | task id: 48845809
[2026-03-03 12:23:49] 2026-03-03 11:23:16,962 | INFO     | errors: (none)
[2026-03-03 12:23:49] 2026-03-03 11:23:16,962 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-03 12:23:49] 2026-03-03 11:23:16,962 | INFO     | pilot state: finished 
[2026-03-03 12:23:49] 2026-03-03 11:23:16,962 | INFO     | transexitcode: 0
[2026-03-03 12:23:49] 2026-03-03 11:23:16,962 | INFO     | exeerrorcode: 0
[2026-03-03 12:23:49] 2026-03-03 11:23:16,962 | INFO     | exeerrordiag: 
[2026-03-03 12:23:49] 2026-03-03 11:23:16,962 | INFO     | exitcode: 0
[2026-03-03 12:23:49] 2026-03-03 11:23:16,962 | INFO     | exitmsg: OK
[2026-03-03 12:23:49] 2026-03-03 11:23:16,962 | INFO     | cpuconsumptiontime: 26307 s
[2026-03-03 12:23:49] 2026-03-03 11:23:16,962 | INFO     | nevents: 400
[2026-03-03 12:23:49] 2026-03-03 11:23:16,962 | INFO     | neventsw: 0
[2026-03-03 12:23:49] 2026-03-03 11:23:16,962 | INFO     | pid: 1704154
[2026-03-03 12:23:49] 2026-03-03 11:23:16,962 | INFO     | pgrp: 1704154
[2026-03-03 12:23:49] 2026-03-03 11:23:16,962 | INFO     | corecount: 4
[2026-03-03 12:23:49] 2026-03-03 11:23:16,962 | INFO     | event service: False
[2026-03-03 12:23:49] 2026-03-03 11:23:16,962 | INFO     | sizes: {0: 2282320, 11: 2282320, 6874: 2309532, 6875: 2318554, 6876: 2318804}
[2026-03-03 12:23:49] 2026-03-03 11:23:16,962 | INFO     | --------------------------------------------------
[2026-03-03 12:23:49] 2026-03-03 11:23:16,962 | INFO     | 
[2026-03-03 12:23:49] 2026-03-03 11:23:16,962 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot248/slots/0
[2026-03-03 12:23:49] 2026-03-03 11:23:16,980 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-03 12:23:49] 2026-03-03 11:23:16,981 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-03 12:23:49] 2026-03-03 11:23:16,981 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-03 12:23:49] 2026-03-03 11:23:16,981 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-03 12:23:49] 2026-03-03 11:23:16,981 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-03 12:23:49] 2026-03-03 11:23:16,981 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-03 12:23:49] 2026-03-03 11:23:16,981 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-03 12:23:49] 2026-03-03 11:23:16,981 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-03 12:23:49] 2026-03-03 11:23:16,981 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-03 12:23:49] 2026-03-03 11:23:16,981 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-03 12:23:49] 2026-03-03 11:23:16,981 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-03 12:23:49] 2026-03-03 11:23:16,981 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-03 12:23:49] 2026-03-03 11:23:16,981 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-03 12:23:49] 2026-03-03 11:23:16,981 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-03 12:23:49] 2026-03-03 11:23:16,981 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-03 12:23:49] 2026-03-03 11:23:16,981 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-03 12:23:49] 2026-03-03 11:23:16,981 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-03 12:23:49] 2026-03-03 11:23:16,981 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-03 12:23:49] 2026-03-03 11:23:16,981 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-03 12:23:49] 2026-03-03 11:23:16,981 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-03 12:23:49] 2026-03-03 11:23:16,982 | INFO     | job 7035824531 has completed (purged errors)
[2026-03-03 12:23:49] 2026-03-03 11:23:16,982 | INFO     | overall cleanup function is called
[2026-03-03 12:23:49] 2026-03-03 11:23:17,274 | INFO     | number of running child processes to parent process 1704154: 1
[2026-03-03 12:23:49] 2026-03-03 11:23:17,274 | INFO     | maximum number of monitored processes: 6
[2026-03-03 12:23:49] 2026-03-03 11:23:17,274 | INFO     | aborting job monitoring since job object (job id=7035824531) has expired
[2026-03-03 12:23:49] 2026-03-03 11:23:17,990 | INFO     | --- collectZombieJob: --- 10, [1704154]
[2026-03-03 12:23:49] 2026-03-03 11:23:17,991 | INFO     | zombie collector waiting for pid 1704154
[2026-03-03 12:23:49] 2026-03-03 11:23:17,991 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-03 12:23:49] 2026-03-03 11:23:17,991 | INFO     | collected zombie processes
[2026-03-03 12:23:49] 2026-03-03 11:23:17,991 | INFO     | will attempt to kill all subprocesses of pid=1704154
[2026-03-03 12:23:49] 2026-03-03 11:23:18,357 | INFO     | process IDs to be killed: [1704154] (in reverse order)
[2026-03-03 12:23:49] 2026-03-03 11:23:18,538 | WARNING  | found no corresponding commands to process id(s)
[2026-03-03 12:23:49] 2026-03-03 11:23:18,539 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-03 12:23:49] 2026-03-03 11:23:18,563 | INFO     | did not find any defunct processes belonging to 1704154
[2026-03-03 12:23:49] 2026-03-03 11:23:18,586 | INFO     | did not find any defunct processes belonging to 1704154
[2026-03-03 12:23:49] 2026-03-03 11:23:18,587 | INFO     | ready for new job
[2026-03-03 12:23:49] 2026-03-03 11:23:18,587 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-03 12:23:49] 2026-03-03 11:23:18,588 | INFO     | **************************************
[2026-03-03 12:23:49] 2026-03-03 11:23:18,588 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-03 12:23:49] 2026-03-03 11:23:18,588 | INFO     | **************************************
[2026-03-03 12:23:49] 2026-03-03 11:23:18,588 | INFO     | 
[2026-03-03 12:23:49] 2026-03-03 11:23:18,594 | INFO     | architecture information:
[2026-03-03 12:23:49] 2026-03-03 11:23:18,594 | INFO     | executing command: cat /etc/os-release
[2026-03-03 12:23:49] 2026-03-03 11:23:18,608 | INFO     | cat /etc/os-release:
[2026-03-03 12:23:49] NAME="CentOS Linux"
[2026-03-03 12:23:49] VERSION="7 (Core)"
[2026-03-03 12:23:49] ID="centos"
[2026-03-03 12:23:49] ID_LIKE="rhel fedora"
[2026-03-03 12:23:49] VERSION_ID="7"
[2026-03-03 12:23:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-03 12:23:49] ANSI_COLOR="0;31"
[2026-03-03 12:23:49] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-03 12:23:49] HOME_URL="https://www.centos.org/"
[2026-03-03 12:23:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-03 12:23:49] 
[2026-03-03 12:23:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-03 12:23:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-03 12:23:49] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-03 12:23:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-03 12:23:49] 
[2026-03-03 12:23:49] 2026-03-03 11:23:18,608 | INFO     | **************************************
[2026-03-03 12:23:49] 2026-03-03 11:23:19,111 | INFO     | executing command: df -mP /var/lib/boinc/var/slot248/slots/0
[2026-03-03 12:23:49] 2026-03-03 11:23:19,125 | INFO     | sufficient remaining disk space (22569549824 B)
[2026-03-03 12:23:49] 2026-03-03 11:23:19,125 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-03 12:23:49] 2026-03-03 11:23:19,126 | INFO     | current server update state: UPDATING_FINAL
[2026-03-03 12:23:49] 2026-03-03 11:23:19,126 | INFO     | update_server=False
[2026-03-03 12:23:49] 2026-03-03 11:23:19,126 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-03 12:23:49] 2026-03-03 11:23:19,126 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-03 12:23:49] 2026-03-03 11:23:19,126 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-03 12:23:49] 2026-03-03 11:23:19,126 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-03 12:23:49] 2026-03-03 11:23:19,126 | INFO     | aborting loop
[2026-03-03 12:23:49] 2026-03-03 11:23:19,229 | INFO     | all data control threads have been joined
[2026-03-03 12:23:49] 2026-03-03 11:23:19,651 | INFO     | all payload control threads have been joined
[2026-03-03 12:23:49] 2026-03-03 11:23:19,853 | INFO     | all job control threads have been joined
[2026-03-03 12:23:49] 2026-03-03 11:23:20,131 | INFO     | [job] retrieve thread has finished
[2026-03-03 12:23:49] 2026-03-03 11:23:20,132 | INFO     | [job] job monitor thread has finished
[2026-03-03 12:23:49] 2026-03-03 11:23:20,234 | INFO     | [data] control thread has finished
[2026-03-03 12:23:49] 2026-03-03 11:23:20,365 | INFO     | [payload] validate_post thread has finished
[2026-03-03 12:23:49] 2026-03-03 11:23:20,446 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-03 12:23:49] 2026-03-03 11:23:20,657 | INFO     | [payload] control thread has finished
[2026-03-03 12:23:49] 2026-03-03 11:23:20,855 | INFO     | [job] control thread has finished
[2026-03-03 12:23:49] 2026-03-03 11:23:21,023 | INFO     | [job] validate thread has finished
[2026-03-03 12:23:49] 2026-03-03 11:23:21,083 | INFO     | [payload] execute_payloads thread has finished
[2026-03-03 12:23:49] 2026-03-03 11:23:21,132 | INFO     | [data] copytool_out thread has finished
[2026-03-03 12:23:49] 2026-03-03 11:23:21,151 | INFO     | [payload] validate_pre thread has finished
[2026-03-03 12:23:49] 2026-03-03 11:23:21,155 | INFO     | [job] create_data_payload thread has finished
[2026-03-03 12:23:49] 2026-03-03 11:23:21,352 | INFO     | [data] copytool_in thread has finished
[2026-03-03 12:23:49] 2026-03-03 11:23:21,441 | INFO     | [payload] failed_post thread has finished
[2026-03-03 12:23:49] 2026-03-03 11:23:21,750 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-03 12:23:49] 2026-03-03 11:23:22,756 | INFO     | [job] queue monitor thread has finished
[2026-03-03 12:23:49] 2026-03-03 11:23:23,132 | INFO     | [data] queue_monitor thread has finished
[2026-03-03 12:23:49] 2026-03-03 11:23:39,492 | INFO     | [monitor] cgroup control has ended
[2026-03-03 12:23:49] 2026-03-03 11:23:39,997 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23358997313344)>', '<ExcThread(monitor, started 23358753474304)>']
[2026-03-03 12:23:49] 2026-03-03 11:23:45,006 | INFO     | all workflow threads have been joined
[2026-03-03 12:23:49] 2026-03-03 11:23:45,007 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-03 12:23:49] 2026-03-03 11:23:45,007 | INFO     | traces error code: 0
[2026-03-03 12:23:49] 2026-03-03 11:23:45,007 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-03 12:23:49] 2026-03-03 11:23:49,418 | INFO     | PID=1689932 has CPU usage=5.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-03 12:23:49] 2026-03-03 11:23:49,418 | INFO     | .. there are 47 such processes running
[2026-03-03 12:23:49] 2026-03-03 11:23:49,418 | INFO     | found 0 job(s) in 20 queues
[2026-03-03 12:23:49] 2026-03-03 11:23:49,418 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-03 12:23:49] 2026-03-03 11:23:49,418 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-03 12:23:49] 2026-03-03 11:23:49,418 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-03 12:23:49] 2026-03-03 11:23:49,418 | CRITICAL | thread 'MainThread' is not alive
[2026-03-03 12:23:49] 2026-03-03 11:23:49,418 | INFO     | [monitor] control thread has ended
[2026-03-03 12:23:49] 2026-03-03 11:23:49,578 [wrapper] ==== pilot stdout END ====
[2026-03-03 12:23:49] 2026-03-03 11:23:49,580 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-03 12:23:49] 2026-03-03 11:23:49,582 [wrapper] pilotpid: 1689932
[2026-03-03 12:23:49] 2026-03-03 11:23:49,585 [wrapper] Pilot exit status: 0
[2026-03-03 12:23:49] 2026-03-03 11:23:49,592 [wrapper] pandaids: 7035824531
[2026-03-03 12:23:49] 2026-03-03 11:23:49,688 [wrapper] cleanup supervisor_pilot 2579226 1689933
[2026-03-03 12:23:49] 2026-03-03 11:23:49,691 [wrapper] Test setup, not cleaning
[2026-03-03 12:23:49] 2026-03-03 11:23:49,693 [wrapper] apfmon messages muted
[2026-03-03 12:23:49] 2026-03-03 11:23:49,695 [wrapper] ==== wrapper stdout END ====
[2026-03-03 12:23:49] 2026-03-03 11:23:49,697 [wrapper] ==== wrapper stderr END ====
[2026-03-03 12:23:49]  *** Error codes and diagnostics ***
[2026-03-03 12:23:49]     "exeErrorCode": 0,
[2026-03-03 12:23:49]     "exeErrorDiag": "",
[2026-03-03 12:23:49]     "pilotErrorCode": 0,
[2026-03-03 12:23:49]     "pilotErrorDiag": "",
[2026-03-03 12:23:49]  *** Listing of results directory ***
[2026-03-03 12:23:49] total 560556
[2026-03-03 12:23:49] -rw-r--r--. 1 boinc boinc    584627 Mar  2 03:17 pilot3.tar.gz
[2026-03-03 12:23:49] -rw-r--r--. 1 boinc boinc      5111 Mar  2 03:27 queuedata.json
[2026-03-03 12:23:49] -rwx------. 1 boinc boinc     36322 Mar  2 03:28 runpilot2-wrapper.sh
[2026-03-03 12:23:49] -rw-r--r--. 1 boinc boinc       100 Mar  3 10:28 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-03 12:23:49] -rwxr-xr-x. 1 boinc boinc      7986 Mar  3 10:28 run_atlas
[2026-03-03 12:23:49] -rw-r--r--. 1 boinc boinc       105 Mar  3 10:28 job.xml
[2026-03-03 12:23:49] -rw-r--r--. 1 boinc boinc      6706 Mar  3 10:28 init_data.xml
[2026-03-03 12:23:49] -rw-r--r--. 2 boinc boinc 308109571 Mar  3 10:28 EVNT.48450722._000001.pool.root.1
[2026-03-03 12:23:49] -rw-r--r--. 2 boinc boinc     15845 Mar  3 10:28 start_atlas.sh
[2026-03-03 12:23:49] drwxrwx--x. 2 boinc boinc      4096 Mar  3 10:28 shared
[2026-03-03 12:23:49] -rw-r--r--. 2 boinc boinc    597941 Mar  3 10:28 input.tar.gz
[2026-03-03 12:23:49] -rw-r--r--. 1 boinc boinc         0 Mar  3 10:28 boinc_lockfile
[2026-03-03 12:23:49] -rw-r--r--. 1 boinc boinc      2593 Mar  3 10:28 pandaJob.out
[2026-03-03 12:23:49] -rw-------. 1 boinc boinc    998412 Mar  3 10:28 agis_schedconf.cvmfs.json
[2026-03-03 12:23:49] -rw-------. 1 boinc boinc   1512931 Mar  3 10:28 agis_ddmendpoints.agis.ALL.json
[2026-03-03 12:23:49] -rw-------. 1 boinc boinc       441 Mar  3 10:28 workernode_map.json
[2026-03-03 12:23:49] drwx------. 5 boinc boinc      4096 Mar  3 10:28 pilot3
[2026-03-03 12:23:49] -rw-------. 1 boinc boinc 259407952 Mar  3 12:22 HITS.48845809._000001.pool.root.1
[2026-03-03 12:23:49] -rw-------. 1 boinc boinc        95 Mar  3 12:22 pilot_heartbeat.json
[2026-03-03 12:23:49] -rw-r--r--. 1 boinc boinc       529 Mar  3 12:23 boinc_task_state.xml
[2026-03-03 12:23:49] -rw-------. 1 boinc boinc      1031 Mar  3 12:23 memory_monitor_summary.json
[2026-03-03 12:23:49] -rw-------. 1 boinc boinc    285585 Mar  3 12:23 log.48845809._000001.job.log.tgz.1
[2026-03-03 12:23:49] -rw-------. 1 boinc boinc      6331 Mar  3 12:23 heartbeat.json
[2026-03-03 12:23:49] -rw-r--r--. 1 boinc boinc      8192 Mar  3 12:23 boinc_mmap_file
[2026-03-03 12:23:49] -rw-r--r--. 1 boinc boinc        27 Mar  3 12:23 wrapper_checkpoint.txt
[2026-03-03 12:23:49] -rw-------. 1 boinc boinc       893 Mar  3 12:23 pilotlog.txt
[2026-03-03 12:23:49] -rw-------. 1 boinc boinc    994993 Mar  3 12:23 log.48845809._000001.job.log.1
[2026-03-03 12:23:49] -rw-------. 1 boinc boinc       357 Mar  3 12:23 output.list
[2026-03-03 12:23:49] -rw-r--r--. 1 boinc boinc       620 Mar  3 12:23 runtime_log
[2026-03-03 12:23:49] -rw-------. 1 boinc boinc   1300480 Mar  3 12:23 result.tar.gz
[2026-03-03 12:23:49] -rw-------. 1 boinc boinc       662 Mar  3 12:23 zJHKDmFC8G9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmERCLDm0AKTdn.diag
[2026-03-03 12:23:49] -rw-r--r--. 1 boinc boinc      9221 Mar  3 12:23 runtime_log.err
[2026-03-03 12:23:49] -rw-r--r--. 1 boinc boinc     21566 Mar  3 12:23 stderr.txt
[2026-03-03 12:23:49] HITS file was successfully produced:
[2026-03-03 12:23:49] -rw-------. 1 boinc boinc 259407952 Mar  3 12:22 shared/HITS.pool.root.1
[2026-03-03 12:23:49]  *** Contents of shared directory: ***
[2026-03-03 12:23:49] total 556104
[2026-03-03 12:23:49] -rw-r--r--. 2 boinc boinc 308109571 Mar  3 10:28 ATLAS.root_0
[2026-03-03 12:23:49] -rw-r--r--. 2 boinc boinc     15845 Mar  3 10:28 start_atlas.sh
[2026-03-03 12:23:49] -rw-r--r--. 2 boinc boinc    597941 Mar  3 10:28 input.tar.gz
[2026-03-03 12:23:49] -rw-------. 1 boinc boinc 259407952 Mar  3 12:22 HITS.pool.root.1
[2026-03-03 12:23:49] -rw-------. 1 boinc boinc   1300480 Mar  3 12:23 result.tar.gz
12:23:51 (1685360): run_atlas exited; CPU time 26583.109340
12:23:51 (1685360): called boinc_finish(0)

</stderr_txt>
]]>

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