Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
20:37:22 (3421038): wrapper (7.7.26015): starting
20:37:22 (3421038): wrapper: running run_atlas (--nthreads 4)
[2026-03-02 20:37:22] Arguments: --nthreads 4
[2026-03-02 20:37:22] Threads: 4
[2026-03-02 20:37:22] Checking for CVMFS
[2026-03-02 20:37:22] No cvmfs_config command found, will try listing directly
[2026-03-02 20:37:22] CVMFS is ok
[2026-03-02 20:37:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-02 20:37:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-02 20:37:22] Further information can be found at the LHC@home message board.
[2026-03-02 20:37:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-02 20:37:22] Checking for apptainer binary...
[2026-03-02 20:37:22] which: no apptainer in ((null))
[2026-03-02 20:37:22] apptainer is not installed, using version from CVMFS
[2026-03-02 20:37:22] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-02 20:37:22] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot212/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut24.grid.cesnet.cz
[2026-03-02 20:37:22] apptainer works
[2026-03-02 20:37:22] Set ATHENA_PROC_NUMBER=4
[2026-03-02 20:37:22] Set ATHENA_CORE_NUMBER=4
[2026-03-02 20:37:22] Starting ATLAS job with PandaID=7035659811
[2026-03-02 20:37:22] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot212/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-02 22:16:49]  *** The last 200 lines of the pilot log: ***
[2026-03-02 22:16:49]  guid=1d6ed44e-8dbf-4616-866f-1be5d5f6a850
[2026-03-02 22:16:49]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-03-02 22:16:49]  is_altstaged=None
[2026-03-02 22:16:49]  is_tar=False
[2026-03-02 22:16:49]  lfn=log.48838432._005735.job.log.tgz.1
[2026-03-02 22:16:49]  mtime=0
[2026-03-02 22:16:49]  protocol_id=None
[2026-03-02 22:16:49]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-02 22:16:49]  replicas=None
[2026-03-02 22:16:49]  scope=mc23_13p6TeV
[2026-03-02 22:16:49]  status=None
[2026-03-02 22:16:49]  status_code=0
[2026-03-02 22:16:49]  storage_token=
[2026-03-02 22:16:49]  surl=/var/lib/boinc/var/slot212/slots/0/PanDA_Pilot-7035659811/log.48838432._005735.job.log.tgz.1
[2026-03-02 22:16:49]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/86/54/log.48838432._005735.job.log.tgz.1
[2026-03-02 22:16:49]  workdir=None
[2026-03-02 22:16:49] ]
[2026-03-02 22:16:49] 2026-03-02 21:16:03,540 | INFO     | transferring file log.48838432._005735.job.log.tgz.1 from /var/lib/boinc/var/slot212/slots/0/PanDA_Pilot-7035659811/log.48838432._005735.job.log.tgz.1 to /var/lib/
[2026-03-02 22:16:49] 2026-03-02 21:16:03,541 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot212/slots/0/PanDA_Pilot-7035659811/log.48838432._005735.job.log.tgz.1 /var/lib/boinc/var/slot212/slots/0/
[2026-03-02 22:16:49] 2026-03-02 21:16:03,555 | INFO     | adding to output.list: log.48838432._005735.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/86/54/log.48838432._005735.job.log.tg
[2026-03-02 22:16:49] 2026-03-02 21:16:03,556 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-02 22:16:49] 2026-03-02 21:16:03,557 | INFO     | summary of transferred files:
[2026-03-02 22:16:49] 2026-03-02 21:16:03,557 | INFO     |  -- lfn=log.48838432._005735.job.log.tgz.1, status_code=0, status=transferred
[2026-03-02 22:16:49] 2026-03-02 21:16:03,557 | INFO     | stage-out finished correctly
[2026-03-02 22:16:49] 2026-03-02 21:16:03,911 | WARNING  | process 3431378 can no longer be monitored (due to stat problems) - aborting
[2026-03-02 22:16:49] 2026-03-02 21:16:03,911 | INFO     | using path: /var/lib/boinc/var/slot212/slots/0/PanDA_Pilot-7035659811/memory_monitor_summary.json (trf name=prmon)
[2026-03-02 22:16:49] 2026-03-02 21:16:04,351 | INFO     | number of running child processes to parent process 3431378: 1
[2026-03-02 22:16:49] 2026-03-02 21:16:04,351 | INFO     | maximum number of monitored processes: 6
[2026-03-02 22:16:49] 2026-03-02 21:16:04,799 | INFO     | time since job start (5910s) is within the limit (349056.0s)
[2026-03-02 22:16:49] 2026-03-02 21:16:05,678 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-02 22:16:49] 2026-03-02 21:16:05,726 | INFO     | job 7035659811 has state=finished
[2026-03-02 22:16:49] 2026-03-02 21:16:05,726 | INFO     | preparing for final server update for job 7035659811 in state='finished'
[2026-03-02 22:16:49] 2026-03-02 21:16:05,727 | INFO     | reading metadata from: /var/lib/boinc/var/slot212/slots/0/PanDA_Pilot-7035659811/jobReport.json
[2026-03-02 22:16:49] 2026-03-02 21:16:05,728 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot212/slots/0/workernode_map.json
[2026-03-02 22:16:49] 2026-03-02 21:16:05,728 | INFO     | this job has now completed (state=finished)
[2026-03-02 22:16:49] 2026-03-02 21:16:05,728 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-02 22:16:49] 2026-03-02 21:16:05,728 | INFO     | log transfer has been attempted: DONE
[2026-03-02 22:16:49] 2026-03-02 21:16:05,728 | INFO     | job 7035659811 has finished - writing final server update
[2026-03-02 22:16:49] 2026-03-02 21:16:05,729 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_16375/.job.ad'
[2026-03-02 22:16:49] 2026-03-02 21:16:05,729 | INFO     | total number of processed events: 400 (read)
[2026-03-02 22:16:49] 2026-03-02 21:16:05,747 | INFO     | using path: /var/lib/boinc/var/slot212/slots/0/PanDA_Pilot-7035659811/memory_monitor_summary.json (trf name=prmon)
[2026-03-02 22:16:49] 2026-03-02 21:16:05,747 | INFO     | extracted standard info from prmon json
[2026-03-02 22:16:49] 2026-03-02 21:16:05,747 | INFO     | extracted standard memory fields from prmon json
[2026-03-02 22:16:49] 2026-03-02 21:16:05,747 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-02 22:16:49] 2026-03-02 21:16:05,748 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-02 22:16:49] 2026-03-02 21:16:05,748 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-02 22:16:49] 2026-03-02 21:16:05,749 | INFO     | fitting pss+swap vs Time
[2026-03-02 22:16:49] 2026-03-02 21:16:05,749 | INFO     | sum of square deviations: 226022842.5
[2026-03-02 22:16:49] 2026-03-02 21:16:05,750 | INFO     | sum of deviations: 162880553.0
[2026-03-02 22:16:49] 2026-03-02 21:16:05,750 | INFO     | mean x: 1772483293.5
[2026-03-02 22:16:49] 2026-03-02 21:16:05,750 | INFO     | mean y: 2356779.9555555554
[2026-03-02 22:16:49] 2026-03-02 21:16:05,750 | INFO     | intersect: -1274961281.5078177
[2026-03-02 22:16:49] 2026-03-02 21:16:05,750 | INFO     | chi2: 0.0005102408176495308
[2026-03-02 22:16:49] 2026-03-02 21:16:05,750 | INFO     | current memory leak: 0.72 B/s (using 90 data points, chi2=0.00)
[2026-03-02 22:16:49] 2026-03-02 21:16:05,750 | INFO     | could have reported an average CPU frequency of 3600 MHz (7 samples)
[2026-03-02 22:16:49] 2026-03-02 21:16:05,750 | INFO     | ..............................
[2026-03-02 22:16:49] 2026-03-02 21:16:05,750 | INFO     | . Timing measurements:
[2026-03-02 22:16:49] 2026-03-02 21:16:05,750 | INFO     | . get job = 0 s
[2026-03-02 22:16:49] 2026-03-02 21:16:05,750 | INFO     | . initial setup = 4 s
[2026-03-02 22:16:49] 2026-03-02 21:16:05,750 | INFO     | . payload setup = 4 s
[2026-03-02 22:16:49] 2026-03-02 21:16:05,750 | INFO     | . stage-in = 0 s
[2026-03-02 22:16:49] 2026-03-02 21:16:05,750 | INFO     | . payload execution = 5888 s
[2026-03-02 22:16:49] 2026-03-02 21:16:05,750 | INFO     | . stage-out = 0 s
[2026-03-02 22:16:49] 2026-03-02 21:16:05,750 | INFO     | . log creation = 0 s
[2026-03-02 22:16:49] 2026-03-02 21:16:05,750 | INFO     | ..............................
[2026-03-02 22:16:49] 2026-03-02 21:16:05,799 | INFO     | 
[2026-03-02 22:16:49] 2026-03-02 21:16:05,799 | INFO     | job summary report
[2026-03-02 22:16:49] 2026-03-02 21:16:05,799 | INFO     | --------------------------------------------------
[2026-03-02 22:16:49] 2026-03-02 21:16:05,799 | INFO     | PanDA job id: 7035659811
[2026-03-02 22:16:49] 2026-03-02 21:16:05,799 | INFO     | task id: 48838432
[2026-03-02 22:16:49] 2026-03-02 21:16:05,799 | INFO     | errors: (none)
[2026-03-02 22:16:49] 2026-03-02 21:16:05,799 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-02 22:16:49] 2026-03-02 21:16:05,799 | INFO     | pilot state: finished 
[2026-03-02 22:16:49] 2026-03-02 21:16:05,799 | INFO     | transexitcode: 0
[2026-03-02 22:16:49] 2026-03-02 21:16:05,799 | INFO     | exeerrorcode: 0
[2026-03-02 22:16:49] 2026-03-02 21:16:05,799 | INFO     | exeerrordiag: 
[2026-03-02 22:16:49] 2026-03-02 21:16:05,799 | INFO     | exitcode: 0
[2026-03-02 22:16:49] 2026-03-02 21:16:05,799 | INFO     | exitmsg: OK
[2026-03-02 22:16:49] 2026-03-02 21:16:05,799 | INFO     | cpuconsumptiontime: 22656 s
[2026-03-02 22:16:49] 2026-03-02 21:16:05,799 | INFO     | nevents: 400
[2026-03-02 22:16:49] 2026-03-02 21:16:05,799 | INFO     | neventsw: 0
[2026-03-02 22:16:49] 2026-03-02 21:16:05,799 | INFO     | pid: 3431378
[2026-03-02 22:16:49] 2026-03-02 21:16:05,800 | INFO     | pgrp: 3431378
[2026-03-02 22:16:49] 2026-03-02 21:16:05,800 | INFO     | corecount: 4
[2026-03-02 22:16:49] 2026-03-02 21:16:05,800 | INFO     | event service: False
[2026-03-02 22:16:49] 2026-03-02 21:16:05,800 | INFO     | sizes: {0: 2282304, 11: 2282304, 5896: 2309058, 5898: 2318080, 5900: 2318136, 5901: 2318330}
[2026-03-02 22:16:49] 2026-03-02 21:16:05,800 | INFO     | --------------------------------------------------
[2026-03-02 22:16:49] 2026-03-02 21:16:05,800 | INFO     | 
[2026-03-02 22:16:49] 2026-03-02 21:16:05,800 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot212/slots/0
[2026-03-02 22:16:49] 2026-03-02 21:16:05,816 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-02 22:16:49] 2026-03-02 21:16:05,817 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-02 22:16:49] 2026-03-02 21:16:05,817 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-02 22:16:49] 2026-03-02 21:16:05,817 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-02 22:16:49] 2026-03-02 21:16:05,817 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-02 22:16:49] 2026-03-02 21:16:05,817 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-02 22:16:49] 2026-03-02 21:16:05,817 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-02 22:16:49] 2026-03-02 21:16:05,817 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-02 22:16:49] 2026-03-02 21:16:05,817 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-02 22:16:49] 2026-03-02 21:16:05,817 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-02 22:16:49] 2026-03-02 21:16:05,817 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-02 22:16:49] 2026-03-02 21:16:05,817 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-02 22:16:49] 2026-03-02 21:16:05,817 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-02 22:16:49] 2026-03-02 21:16:05,817 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-02 22:16:49] 2026-03-02 21:16:05,817 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-02 22:16:49] 2026-03-02 21:16:05,817 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-02 22:16:49] 2026-03-02 21:16:05,817 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-02 22:16:49] 2026-03-02 21:16:05,817 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-02 22:16:49] 2026-03-02 21:16:05,817 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-02 22:16:49] 2026-03-02 21:16:05,817 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-02 22:16:49] 2026-03-02 21:16:05,817 | INFO     | job 7035659811 has completed (purged errors)
[2026-03-02 22:16:49] 2026-03-02 21:16:05,818 | INFO     | overall cleanup function is called
[2026-03-02 22:16:49] 2026-03-02 21:16:06,824 | INFO     | --- collectZombieJob: --- 10, [3431378]
[2026-03-02 22:16:49] 2026-03-02 21:16:06,824 | INFO     | zombie collector waiting for pid 3431378
[2026-03-02 22:16:49] 2026-03-02 21:16:06,824 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-02 22:16:49] 2026-03-02 21:16:06,824 | INFO     | collected zombie processes
[2026-03-02 22:16:49] 2026-03-02 21:16:06,824 | INFO     | will attempt to kill all subprocesses of pid=3431378
[2026-03-02 22:16:49] 2026-03-02 21:16:07,252 | INFO     | process IDs to be killed: [3431378] (in reverse order)
[2026-03-02 22:16:49] 2026-03-02 21:16:07,460 | WARNING  | found no corresponding commands to process id(s)
[2026-03-02 22:16:49] 2026-03-02 21:16:07,461 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-02 22:16:49] 2026-03-02 21:16:07,489 | INFO     | did not find any defunct processes belonging to 3431378
[2026-03-02 22:16:49] 2026-03-02 21:16:07,515 | INFO     | did not find any defunct processes belonging to 3431378
[2026-03-02 22:16:49] 2026-03-02 21:16:07,515 | INFO     | ready for new job
[2026-03-02 22:16:49] 2026-03-02 21:16:07,515 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-02 22:16:49] 2026-03-02 21:16:07,517 | INFO     | **************************************
[2026-03-02 22:16:49] 2026-03-02 21:16:07,517 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-02 22:16:49] 2026-03-02 21:16:07,517 | INFO     | **************************************
[2026-03-02 22:16:49] 2026-03-02 21:16:07,517 | INFO     | 
[2026-03-02 22:16:49] 2026-03-02 21:16:07,522 | INFO     | architecture information:
[2026-03-02 22:16:49] 2026-03-02 21:16:07,522 | INFO     | executing command: cat /etc/os-release
[2026-03-02 22:16:49] 2026-03-02 21:16:07,542 | INFO     | cat /etc/os-release:
[2026-03-02 22:16:49] NAME="CentOS Linux"
[2026-03-02 22:16:49] VERSION="7 (Core)"
[2026-03-02 22:16:49] ID="centos"
[2026-03-02 22:16:49] ID_LIKE="rhel fedora"
[2026-03-02 22:16:49] VERSION_ID="7"
[2026-03-02 22:16:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-02 22:16:49] ANSI_COLOR="0;31"
[2026-03-02 22:16:49] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-02 22:16:49] HOME_URL="https://www.centos.org/"
[2026-03-02 22:16:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-02 22:16:49] 
[2026-03-02 22:16:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-02 22:16:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-02 22:16:49] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-02 22:16:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-02 22:16:49] 
[2026-03-02 22:16:49] 2026-03-02 21:16:07,542 | INFO     | **************************************
[2026-03-02 22:16:49] 2026-03-02 21:16:08,045 | INFO     | executing command: df -mP /var/lib/boinc/var/slot212/slots/0
[2026-03-02 22:16:49] 2026-03-02 21:16:08,061 | INFO     | sufficient remaining disk space (20707278848 B)
[2026-03-02 22:16:49] 2026-03-02 21:16:08,061 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-02 22:16:49] 2026-03-02 21:16:08,061 | INFO     | current server update state: UPDATING_FINAL
[2026-03-02 22:16:49] 2026-03-02 21:16:08,061 | INFO     | update_server=False
[2026-03-02 22:16:49] 2026-03-02 21:16:08,061 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-02 22:16:49] 2026-03-02 21:16:08,061 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-02 22:16:49] 2026-03-02 21:16:08,062 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-02 22:16:49] 2026-03-02 21:16:08,062 | INFO     | aborting loop
[2026-03-02 22:16:49] 2026-03-02 21:16:08,150 | INFO     | all job control threads have been joined
[2026-03-02 22:16:49] 2026-03-02 21:16:08,728 | INFO     | all data control threads have been joined
[2026-03-02 22:16:49] 2026-03-02 21:16:09,023 | INFO     | all payload control threads have been joined
[2026-03-02 22:16:49] 2026-03-02 21:16:09,065 | INFO     | [job] retrieve thread has finished
[2026-03-02 22:16:49] 2026-03-02 21:16:09,068 | INFO     | [job] job monitor thread has finished
[2026-03-02 22:16:49] 2026-03-02 21:16:09,104 | INFO     | [payload] validate_post thread has finished
[2026-03-02 22:16:49] 2026-03-02 21:16:09,116 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-02 22:16:49] 2026-03-02 21:16:09,155 | INFO     | [job] control thread has finished
[2026-03-02 22:16:49] 2026-03-02 21:16:09,171 | INFO     | [job] validate thread has finished
[2026-03-02 22:16:49] 2026-03-02 21:16:09,238 | INFO     | [data] copytool_in thread has finished
[2026-03-02 22:16:49] 2026-03-02 21:16:09,466 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-02 22:16:49] 2026-03-02 21:16:09,733 | INFO     | [data] control thread has finished
[2026-03-02 22:16:49] 2026-03-02 21:16:09,969 | INFO     | [payload] execute_payloads thread has finished
[2026-03-02 22:16:49] 2026-03-02 21:16:10,028 | INFO     | [payload] control thread has finished
[2026-03-02 22:16:49] 2026-03-02 21:16:10,250 | INFO     | [payload] failed_post thread has finished
[2026-03-02 22:16:49] 2026-03-02 21:16:10,498 | INFO     | [job] create_data_payload thread has finished
[2026-03-02 22:16:49] 2026-03-02 21:16:10,500 | INFO     | [payload] validate_pre thread has finished
[2026-03-02 22:16:49] 2026-03-02 21:16:10,809 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-02 22:16:49] 2026-03-02 21:16:11,121 | INFO     | [data] copytool_out thread has finished
[2026-03-02 22:16:49] 2026-03-02 21:16:11,815 | INFO     | [job] queue monitor thread has finished
[2026-03-02 22:16:49] 2026-03-02 21:16:12,067 | INFO     | [data] queue_monitor thread has finished
[2026-03-02 22:16:49] 2026-03-02 21:16:38,414 | INFO     | PID=3425565 has CPU usage=7.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-02 22:16:49] 2026-03-02 21:16:38,414 | INFO     | .. there are 45 such processes running
[2026-03-02 22:16:49] 2026-03-02 21:16:38,415 | INFO     | found 0 job(s) in 20 queues
[2026-03-02 22:16:49] 2026-03-02 21:16:38,415 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-02 22:16:49] 2026-03-02 21:16:38,415 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-02 22:16:49] 2026-03-02 21:16:43,161 | INFO     | [monitor] cgroup control has ended
[2026-03-02 22:16:49] 2026-03-02 21:16:44,282 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22686186481472)>', '<ExcThread(monitor, started 22685876733696)>']
[2026-03-02 22:16:49] 2026-03-02 21:16:44,445 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-02 22:16:49] 2026-03-02 21:16:44,445 | INFO     | [monitor] control thread has ended
[2026-03-02 22:16:49] 2026-03-02 21:16:49,308 | INFO     | all workflow threads have been joined
[2026-03-02 22:16:49] 2026-03-02 21:16:49,308 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-02 22:16:49] 2026-03-02 21:16:49,308 | INFO     | traces error code: 0
[2026-03-02 22:16:49] 2026-03-02 21:16:49,309 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-02 22:16:49] 2026-03-02 21:16:49,500 [wrapper] ==== pilot stdout END ====
[2026-03-02 22:16:49] 2026-03-02 21:16:49,502 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-02 22:16:49] 2026-03-02 21:16:49,504 [wrapper] pilotpid: 3425565
[2026-03-02 22:16:49] 2026-03-02 21:16:49,506 [wrapper] Pilot exit status: 0
[2026-03-02 22:16:49] 2026-03-02 21:16:49,514 [wrapper] pandaids: 7035659811
[2026-03-02 22:16:49] 2026-03-02 21:16:49,637 [wrapper] cleanup supervisor_pilot 4162650 3425566
[2026-03-02 22:16:49] 2026-03-02 21:16:49,640 [wrapper] Test setup, not cleaning
[2026-03-02 22:16:49] 2026-03-02 21:16:49,642 [wrapper] apfmon messages muted
[2026-03-02 22:16:49] 2026-03-02 21:16:49,644 [wrapper] ==== wrapper stdout END ====
[2026-03-02 22:16:49] 2026-03-02 21:16:49,646 [wrapper] ==== wrapper stderr END ====
[2026-03-02 22:16:49]  *** Error codes and diagnostics ***
[2026-03-02 22:16:49]     "exeErrorCode": 0,
[2026-03-02 22:16:49]     "exeErrorDiag": "",
[2026-03-02 22:16:49]     "pilotErrorCode": 0,
[2026-03-02 22:16:49]     "pilotErrorDiag": "",
[2026-03-02 22:16:49]  *** Listing of results directory ***
[2026-03-02 22:16:49] total 502308
[2026-03-02 22:16:49] -rw-r--r--. 1 boinc boinc    584627 Mar  1 23:23 pilot3.tar.gz
[2026-03-02 22:16:49] -rwx------. 1 boinc boinc     36322 Mar  1 23:26 runpilot2-wrapper.sh
[2026-03-02 22:16:49] -rw-r--r--. 1 boinc boinc      5111 Mar  1 23:28 queuedata.json
[2026-03-02 22:16:49] -rw-r--r--. 1 boinc boinc       100 Mar  2 20:37 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-02 22:16:49] -rwxr-xr-x. 1 boinc boinc      7986 Mar  2 20:37 run_atlas
[2026-03-02 22:16:49] -rw-r--r--. 1 boinc boinc       105 Mar  2 20:37 job.xml
[2026-03-02 22:16:49] -rw-r--r--. 2 boinc boinc 283811050 Mar  2 20:37 EVNT.48220101._000217.pool.root.1
[2026-03-02 22:16:49] -rw-r--r--. 1 boinc boinc      6705 Mar  2 20:37 init_data.xml
[2026-03-02 22:16:49] -rw-r--r--. 2 boinc boinc     15845 Mar  2 20:37 start_atlas.sh
[2026-03-02 22:16:49] drwxrwx--x. 2 boinc boinc      4096 Mar  2 20:37 shared
[2026-03-02 22:16:49] -rw-r--r--. 2 boinc boinc    597970 Mar  2 20:37 input.tar.gz
[2026-03-02 22:16:49] -rw-r--r--. 1 boinc boinc         0 Mar  2 20:37 boinc_lockfile
[2026-03-02 22:16:49] -rw-r--r--. 1 boinc boinc      2580 Mar  2 20:37 pandaJob.out
[2026-03-02 22:16:49] -rw-------. 1 boinc boinc    998470 Mar  2 20:37 agis_schedconf.cvmfs.json
[2026-03-02 22:16:49] -rw-------. 1 boinc boinc   1512931 Mar  2 20:37 agis_ddmendpoints.agis.ALL.json
[2026-03-02 22:16:49] -rw-------. 1 boinc boinc       445 Mar  2 20:37 workernode_map.json
[2026-03-02 22:16:49] drwx------. 5 boinc boinc      4096 Mar  2 20:37 pilot3
[2026-03-02 22:16:49] -rw-r--r--. 1 boinc boinc       529 Mar  2 22:15 boinc_task_state.xml
[2026-03-02 22:16:49] -rw-------. 1 boinc boinc 224370681 Mar  2 22:15 HITS.48838432._005735.pool.root.1
[2026-03-02 22:16:49] -rw-------. 1 boinc boinc      1031 Mar  2 22:15 memory_monitor_summary.json
[2026-03-02 22:16:49] -rw-------. 1 boinc boinc    271023 Mar  2 22:16 log.48838432._005735.job.log.tgz.1
[2026-03-02 22:16:49] -rw-------. 1 boinc boinc      6353 Mar  2 22:16 heartbeat.json
[2026-03-02 22:16:49] -rw-r--r--. 1 boinc boinc      8192 Mar  2 22:16 boinc_mmap_file
[2026-03-02 22:16:49] -rw-r--r--. 1 boinc boinc        27 Mar  2 22:16 wrapper_checkpoint.txt
[2026-03-02 22:16:49] -rw-------. 1 boinc boinc        95 Mar  2 22:16 pilot_heartbeat.json
[2026-03-02 22:16:49] -rw-------. 1 boinc boinc      4830 Mar  2 22:16 pilotlog.txt
[2026-03-02 22:16:49] -rw-------. 1 boinc boinc    856844 Mar  2 22:16 log.48838432._005735.job.log.1
[2026-03-02 22:16:49] -rw-------. 1 boinc boinc       357 Mar  2 22:16 output.list
[2026-03-02 22:16:49] -rw-r--r--. 1 boinc boinc       620 Mar  2 22:16 runtime_log
[2026-03-02 22:16:49] -rw-------. 1 boinc boinc   1146880 Mar  2 22:16 result.tar.gz
[2026-03-02 22:16:49] -rw-r--r--. 1 boinc boinc      9221 Mar  2 22:16 runtime_log.err
[2026-03-02 22:16:49] -rw-------. 1 boinc boinc       662 Mar  2 22:16 e4oLDmWQ4G9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDm5rBLDmLwuYGn.diag
[2026-03-02 22:16:49] -rw-r--r--. 1 boinc boinc     16446 Mar  2 22:16 stderr.txt
[2026-03-02 22:16:49] HITS file was successfully produced:
[2026-03-02 22:16:49] -rw-------. 1 boinc boinc 224370681 Mar  2 22:15 shared/HITS.pool.root.1
[2026-03-02 22:16:49]  *** Contents of shared directory: ***
[2026-03-02 22:16:49] total 498000
[2026-03-02 22:16:49] -rw-r--r--. 2 boinc boinc 283811050 Mar  2 20:37 ATLAS.root_0
[2026-03-02 22:16:49] -rw-r--r--. 2 boinc boinc     15845 Mar  2 20:37 start_atlas.sh
[2026-03-02 22:16:49] -rw-r--r--. 2 boinc boinc    597970 Mar  2 20:37 input.tar.gz
[2026-03-02 22:16:49] -rw-------. 1 boinc boinc 224370681 Mar  2 22:15 HITS.pool.root.1
[2026-03-02 22:16:49] -rw-------. 1 boinc boinc   1146880 Mar  2 22:16 result.tar.gz
22:16:50 (3421038): run_atlas exited; CPU time 22917.748403
22:16:50 (3421038): called boinc_finish(0)

</stderr_txt>
]]>

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