Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:47:13 (91700): wrapper (7.7.26015): starting
14:47:13 (91700): wrapper: running run_atlas (--nthreads 4)
[2026-03-03 14:47:13] Arguments: --nthreads 4
[2026-03-03 14:47:13] Threads: 4
[2026-03-03 14:47:13] Checking for CVMFS
[2026-03-03 14:47:13] No cvmfs_config command found, will try listing directly
[2026-03-03 14:47:13] CVMFS is ok
[2026-03-03 14:47:13] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-03 14:47:13] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-03 14:47:13] Further information can be found at the LHC@home message board.
[2026-03-03 14:47:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-03 14:47:13] Checking for apptainer binary...
[2026-03-03 14:47:13] which: no apptainer in ((null))
[2026-03-03 14:47:13] apptainer is not installed, using version from CVMFS
[2026-03-03 14:47:13] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-03 14:47:13] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot248/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut21.grid.cesnet.cz
[2026-03-03 14:47:13] apptainer works
[2026-03-03 14:47:13] Set ATHENA_PROC_NUMBER=4
[2026-03-03 14:47:13] Set ATHENA_CORE_NUMBER=4
[2026-03-03 14:47:13] Starting ATLAS job with PandaID=7035613566
[2026-03-03 14:47:13] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot248/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
15:44:40 (515331): wrapper (7.7.26015): starting
15:44:40 (515331): wrapper: running run_atlas (--nthreads 4)
[2026-03-03 15:44:40] Arguments: --nthreads 4
[2026-03-03 15:44:40] Threads: 4
[2026-03-03 15:44:40] This job has been restarted, cleaning up previous attempt
[2026-03-03 15:44:40] Checking for CVMFS
[2026-03-03 15:44:40] No cvmfs_config command found, will try listing directly
[2026-03-03 15:44:40] CVMFS is ok
[2026-03-03 15:44:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-03 15:44:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-03 15:44:40] Further information can be found at the LHC@home message board.
[2026-03-03 15:44:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-03 15:44:40] Checking for apptainer binary...
[2026-03-03 15:44:40] which: no apptainer in ((null))
[2026-03-03 15:44:40] apptainer is not installed, using version from CVMFS
[2026-03-03 15:44:40] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-03 15:44:40] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot248/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut21.grid.cesnet.cz
[2026-03-03 15:44:40] apptainer works
[2026-03-03 15:44:40] Set ATHENA_PROC_NUMBER=4
[2026-03-03 15:44:40] Set ATHENA_CORE_NUMBER=4
[2026-03-03 15:44:40] Starting ATLAS job with PandaID=7035613566
[2026-03-03 15:44:40] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot248/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-03 17:49:13]  *** The last 200 lines of the pilot log: ***
[2026-03-03 17:49:14] 2026-03-03 16:48:40,119 | INFO     | job 7035613566 has finished - writing final server update
[2026-03-03 17:49:14] 2026-03-03 16:48:40,119 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_499916/.job.ad'
[2026-03-03 17:49:14] 2026-03-03 16:48:40,120 | INFO     | total number of processed events: 400 (read)
[2026-03-03 17:49:14] 2026-03-03 16:48:40,137 | INFO     | using path: /var/lib/boinc/var/slot248/slots/0/PanDA_Pilot-7035613566/memory_monitor_summary.json (trf name=prmon)
[2026-03-03 17:49:14] 2026-03-03 16:48:40,138 | INFO     | extracted standard info from prmon json
[2026-03-03 17:49:14] 2026-03-03 16:48:40,138 | INFO     | extracted standard memory fields from prmon json
[2026-03-03 17:49:14] 2026-03-03 16:48:40,138 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-03 17:49:14] 2026-03-03 16:48:40,138 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-03 17:49:14] 2026-03-03 16:48:40,138 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-03 17:49:14] 2026-03-03 16:48:40,139 | INFO     | fitting pss+swap vs Time
[2026-03-03 17:49:14] 2026-03-03 16:48:40,140 | INFO     | sum of square deviations: 549294020.0
[2026-03-03 17:49:14] 2026-03-03 16:48:40,140 | INFO     | sum of deviations: 12612462053.0
[2026-03-03 17:49:14] 2026-03-03 16:48:40,140 | INFO     | mean x: 1772552808.0
[2026-03-03 17:49:14] 2026-03-03 16:48:40,140 | INFO     | mean y: 2287136.5702479337
[2026-03-03 17:49:14] 2026-03-03 16:48:40,140 | INFO     | intersect: -40697691770.60699
[2026-03-03 17:49:14] 2026-03-03 16:48:40,140 | INFO     | chi2: 1.0657528831323053
[2026-03-03 17:49:14] 2026-03-03 16:48:40,140 | INFO     | sum of square deviations: 483971865.0
[2026-03-03 17:49:14] 2026-03-03 16:48:40,140 | INFO     | sum of deviations: 12011958838.0
[2026-03-03 17:49:14] 2026-03-03 16:48:40,141 | INFO     | mean x: 1772552655.5
[2026-03-03 17:49:14] 2026-03-03 16:48:40,141 | INFO     | mean y: 2285733.7413793104
[2026-03-03 17:49:14] 2026-03-03 16:48:40,141 | INFO     | intersect: -43991654980.25776
[2026-03-03 17:49:14] 2026-03-03 16:48:40,141 | INFO     | chi2: 1.0669866125412215
[2026-03-03 17:49:14] 2026-03-03 16:48:40,141 | INFO     | current chi2=1.0669866125412215 (change=-0.1157613015589691 %)
[2026-03-03 17:49:14] 2026-03-03 16:48:40,141 | INFO     | right removable region: 115
[2026-03-03 17:49:14] 2026-03-03 16:48:40,141 | INFO     | sum of square deviations: 483971865.0
[2026-03-03 17:49:14] 2026-03-03 16:48:40,141 | INFO     | sum of deviations: 1691785498.5000002
[2026-03-03 17:49:14] 2026-03-03 16:48:40,141 | INFO     | mean x: 1772552960.5
[2026-03-03 17:49:14] 2026-03-03 16:48:40,141 | INFO     | mean y: 2311952.2672413792
[2026-03-03 17:49:14] 2026-03-03 16:48:40,141 | INFO     | intersect: -6193873427.015383
[2026-03-03 17:49:14] 2026-03-03 16:48:40,141 | INFO     | chi2: 0.00029991630389012905
[2026-03-03 17:49:14] 2026-03-03 16:48:40,141 | INFO     | current chi2=0.00029991630389012905 (change=99.9718587386779 %)
[2026-03-03 17:49:14] 2026-03-03 16:48:40,141 | INFO     | sum of square deviations: 424045160.0
[2026-03-03 17:49:14] 2026-03-03 16:48:40,142 | INFO     | sum of deviations: 1256114501.0
[2026-03-03 17:49:14] 2026-03-03 16:48:40,142 | INFO     | mean x: 1772553113.0
[2026-03-03 17:49:14] 2026-03-03 16:48:40,142 | INFO     | mean y: 2313055.585585586
[2026-03-03 17:49:14] 2026-03-03 16:48:40,142 | INFO     | intersect: -5248376915.812724
[2026-03-03 17:49:14] 2026-03-03 16:48:40,142 | INFO     | chi2: 9.049870545957712e-05
[2026-03-03 17:49:14] 2026-03-03 16:48:40,142 | INFO     | current chi2=9.049870545957712e-05 (change=69.8253465097615 %)
[2026-03-03 17:49:14] 2026-03-03 16:48:40,142 | INFO     | sum of square deviations: 369281342.5
[2026-03-03 17:49:14] 2026-03-03 16:48:40,142 | INFO     | sum of deviations: 1080413883.0000002
[2026-03-03 17:49:14] 2026-03-03 16:48:40,142 | INFO     | mean x: 1772553265.5
[2026-03-03 17:49:14] 2026-03-03 16:48:40,142 | INFO     | mean y: 2313541.320754717
[2026-03-03 17:49:14] 2026-03-03 16:48:40,142 | INFO     | intersect: -5183681351.998788
[2026-03-03 17:49:14] 2026-03-03 16:48:40,143 | INFO     | chi2: 7.930982635062543e-05
[2026-03-03 17:49:14] 2026-03-03 16:48:40,143 | INFO     | current chi2=7.930982635062543e-05 (change=12.36357918285296 %)
[2026-03-03 17:49:14] 2026-03-03 16:48:40,143 | INFO     | left removable region: 30
[2026-03-03 17:49:14] 2026-03-03 16:48:40,143 | INFO     | sum of square deviations: 190403570.0
[2026-03-03 17:49:14] 2026-03-03 16:48:40,143 | INFO     | sum of deviations: 551520093.0000001
[2026-03-03 17:49:14] 2026-03-03 16:48:40,143 | INFO     | mean x: 1772553540.0
[2026-03-03 17:49:14] 2026-03-03 16:48:40,143 | INFO     | mean y: 2314760.0823529414
[2026-03-03 17:49:14] 2026-03-03 16:48:40,143 | INFO     | intersect: -5132036939.459202
[2026-03-03 17:49:14] 2026-03-03 16:48:40,143 | INFO     | chi2: 5.2310479641853814e-05
[2026-03-03 17:49:14] 2026-03-03 16:48:40,143 | INFO     | current memory leak: 2.90 B/s (using 85 data points, chi2=0.00)
[2026-03-03 17:49:14] 2026-03-03 16:48:40,143 | INFO     | could have reported an average CPU frequency of 3621 MHz (8 samples)
[2026-03-03 17:49:14] 2026-03-03 16:48:40,143 | INFO     | ..............................
[2026-03-03 17:49:14] 2026-03-03 16:48:40,144 | INFO     | . Timing measurements:
[2026-03-03 17:49:14] 2026-03-03 16:48:40,144 | INFO     | . get job = 0 s
[2026-03-03 17:49:14] 2026-03-03 16:48:40,144 | INFO     | . initial setup = 0 s
[2026-03-03 17:49:14] 2026-03-03 16:48:40,144 | INFO     | . payload setup = 18 s
[2026-03-03 17:49:14] 2026-03-03 16:48:40,144 | INFO     | . stage-in = 0 s
[2026-03-03 17:49:14] 2026-03-03 16:48:40,144 | INFO     | . payload execution = 7386 s
[2026-03-03 17:49:14] 2026-03-03 16:48:40,144 | INFO     | . stage-out = 0 s
[2026-03-03 17:49:14] 2026-03-03 16:48:40,144 | INFO     | . log creation = 0 s
[2026-03-03 17:49:14] 2026-03-03 16:48:40,144 | INFO     | ..............................
[2026-03-03 17:49:14] 2026-03-03 16:48:40,191 | INFO     | 
[2026-03-03 17:49:14] 2026-03-03 16:48:40,191 | INFO     | job summary report
[2026-03-03 17:49:14] 2026-03-03 16:48:40,191 | INFO     | --------------------------------------------------
[2026-03-03 17:49:14] 2026-03-03 16:48:40,191 | INFO     | PanDA job id: 7035613566
[2026-03-03 17:49:14] 2026-03-03 16:48:40,191 | INFO     | task id: 48844822
[2026-03-03 17:49:14] 2026-03-03 16:48:40,191 | INFO     | errors: (none)
[2026-03-03 17:49:14] 2026-03-03 16:48:40,191 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-03 17:49:14] 2026-03-03 16:48:40,191 | INFO     | pilot state: finished 
[2026-03-03 17:49:14] 2026-03-03 16:48:40,191 | INFO     | transexitcode: 0
[2026-03-03 17:49:14] 2026-03-03 16:48:40,191 | INFO     | exeerrorcode: 0
[2026-03-03 17:49:14] 2026-03-03 16:48:40,192 | INFO     | exeerrordiag: 
[2026-03-03 17:49:14] 2026-03-03 16:48:40,192 | INFO     | exitcode: 0
[2026-03-03 17:49:14] 2026-03-03 16:48:40,192 | INFO     | exitmsg: OK
[2026-03-03 17:49:14] 2026-03-03 16:48:40,192 | INFO     | cpuconsumptiontime: 26929 s
[2026-03-03 17:49:14] 2026-03-03 16:48:40,192 | INFO     | nevents: 400
[2026-03-03 17:49:14] 2026-03-03 16:48:40,192 | INFO     | neventsw: 0
[2026-03-03 17:49:14] 2026-03-03 16:48:40,192 | INFO     | pid: 1113154
[2026-03-03 17:49:14] 2026-03-03 16:48:40,192 | INFO     | pgrp: 1113154
[2026-03-03 17:49:14] 2026-03-03 16:48:40,192 | INFO     | corecount: 4
[2026-03-03 17:49:14] 2026-03-03 16:48:40,192 | INFO     | event service: False
[2026-03-03 17:49:14] 2026-03-03 16:48:40,192 | INFO     | sizes: {0: 2287213, 11: 2287213, 7409: 2315011, 7410: 2324033, 7411: 2324089, 7414: 2324283}
[2026-03-03 17:49:14] 2026-03-03 16:48:40,192 | INFO     | --------------------------------------------------
[2026-03-03 17:49:14] 2026-03-03 16:48:40,192 | INFO     | 
[2026-03-03 17:49:14] 2026-03-03 16:48:40,192 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot248/slots/0
[2026-03-03 17:49:14] 2026-03-03 16:48:40,206 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-03 17:49:14] 2026-03-03 16:48:40,207 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-03 17:49:14] 2026-03-03 16:48:40,207 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-03 17:49:14] 2026-03-03 16:48:40,207 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-03 17:49:14] 2026-03-03 16:48:40,207 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-03 17:49:14] 2026-03-03 16:48:40,207 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-03 17:49:14] 2026-03-03 16:48:40,207 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-03 17:49:14] 2026-03-03 16:48:40,207 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-03 17:49:14] 2026-03-03 16:48:40,207 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-03 17:49:14] 2026-03-03 16:48:40,207 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-03 17:49:14] 2026-03-03 16:48:40,207 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-03 17:49:14] 2026-03-03 16:48:40,207 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-03 17:49:14] 2026-03-03 16:48:40,207 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-03 17:49:14] 2026-03-03 16:48:40,207 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-03 17:49:14] 2026-03-03 16:48:40,207 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-03 17:49:14] 2026-03-03 16:48:40,207 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-03 17:49:14] 2026-03-03 16:48:40,207 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-03 17:49:14] 2026-03-03 16:48:40,207 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-03 17:49:14] 2026-03-03 16:48:40,207 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-03 17:49:14] 2026-03-03 16:48:40,207 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-03 17:49:14] 2026-03-03 16:48:40,207 | INFO     | job 7035613566 has completed (purged errors)
[2026-03-03 17:49:14] 2026-03-03 16:48:40,207 | INFO     | overall cleanup function is called
[2026-03-03 17:49:14] 2026-03-03 16:48:41,214 | INFO     | --- collectZombieJob: --- 10, [1113154]
[2026-03-03 17:49:14] 2026-03-03 16:48:41,214 | INFO     | zombie collector waiting for pid 1113154
[2026-03-03 17:49:14] 2026-03-03 16:48:41,214 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-03 17:49:14] 2026-03-03 16:48:41,214 | INFO     | collected zombie processes
[2026-03-03 17:49:14] 2026-03-03 16:48:41,214 | INFO     | will attempt to kill all subprocesses of pid=1113154
[2026-03-03 17:49:14] 2026-03-03 16:48:41,778 | INFO     | process IDs to be killed: [1113154] (in reverse order)
[2026-03-03 17:49:14] 2026-03-03 16:48:42,026 | WARNING  | found no corresponding commands to process id(s)
[2026-03-03 17:49:14] 2026-03-03 16:48:42,027 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-03 17:49:14] 2026-03-03 16:48:42,053 | INFO     | did not find any defunct processes belonging to 1113154
[2026-03-03 17:49:14] 2026-03-03 16:48:42,079 | INFO     | did not find any defunct processes belonging to 1113154
[2026-03-03 17:49:14] 2026-03-03 16:48:42,079 | INFO     | ready for new job
[2026-03-03 17:49:14] 2026-03-03 16:48:42,079 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-03 17:49:14] 2026-03-03 16:48:42,080 | INFO     | **************************************
[2026-03-03 17:49:14] 2026-03-03 16:48:42,080 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-03 17:49:14] 2026-03-03 16:48:42,081 | INFO     | **************************************
[2026-03-03 17:49:14] 2026-03-03 16:48:42,081 | INFO     | 
[2026-03-03 17:49:14] 2026-03-03 16:48:42,098 | INFO     | architecture information:
[2026-03-03 17:49:14] 2026-03-03 16:48:42,098 | INFO     | executing command: cat /etc/os-release
[2026-03-03 17:49:14] 2026-03-03 16:48:42,125 | INFO     | cat /etc/os-release:
[2026-03-03 17:49:14] NAME="CentOS Linux"
[2026-03-03 17:49:14] VERSION="7 (Core)"
[2026-03-03 17:49:14] ID="centos"
[2026-03-03 17:49:14] ID_LIKE="rhel fedora"
[2026-03-03 17:49:14] VERSION_ID="7"
[2026-03-03 17:49:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-03 17:49:14] ANSI_COLOR="0;31"
[2026-03-03 17:49:14] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-03 17:49:14] HOME_URL="https://www.centos.org/"
[2026-03-03 17:49:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-03 17:49:14] 
[2026-03-03 17:49:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-03 17:49:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-03 17:49:14] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-03 17:49:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-03 17:49:14] 
[2026-03-03 17:49:14] 2026-03-03 16:48:42,125 | INFO     | **************************************
[2026-03-03 17:49:14] 2026-03-03 16:48:42,631 | INFO     | executing command: df -mP /var/lib/boinc/var/slot248/slots/0
[2026-03-03 17:49:14] 2026-03-03 16:48:42,670 | INFO     | sufficient remaining disk space (23275241472 B)
[2026-03-03 17:49:14] 2026-03-03 16:48:42,670 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-03 17:49:14] 2026-03-03 16:48:42,671 | INFO     | current server update state: UPDATING_FINAL
[2026-03-03 17:49:14] 2026-03-03 16:48:42,671 | INFO     | update_server=False
[2026-03-03 17:49:14] 2026-03-03 16:48:42,671 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-03 17:49:14] 2026-03-03 16:48:42,672 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-03 17:49:14] 2026-03-03 16:48:42,819 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-03 17:49:14] 2026-03-03 16:48:42,819 | INFO     | aborting loop
[2026-03-03 17:49:14] 2026-03-03 16:48:42,905 | INFO     | all job control threads have been joined
[2026-03-03 17:49:14] 2026-03-03 16:48:43,048 | INFO     | all payload control threads have been joined
[2026-03-03 17:49:14] 2026-03-03 16:48:43,200 | INFO     | all data control threads have been joined
[2026-03-03 17:49:14] 2026-03-03 16:48:43,390 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-03 17:49:14] 2026-03-03 16:48:43,676 | INFO     | [job] retrieve thread has finished
[2026-03-03 17:49:14] 2026-03-03 16:48:43,824 | INFO     | [job] job monitor thread has finished
[2026-03-03 17:49:14] 2026-03-03 16:48:43,874 | INFO     | [payload] execute_payloads thread has finished
[2026-03-03 17:49:14] 2026-03-03 16:48:43,911 | INFO     | [job] control thread has finished
[2026-03-03 17:49:14] 2026-03-03 16:48:43,975 | INFO     | [job] create_data_payload thread has finished
[2026-03-03 17:49:14] 2026-03-03 16:48:44,054 | INFO     | [payload] control thread has finished
[2026-03-03 17:49:14] 2026-03-03 16:48:44,206 | INFO     | [data] control thread has finished
[2026-03-03 17:49:14] 2026-03-03 16:48:44,557 | INFO     | [payload] validate_post thread has finished
[2026-03-03 17:49:14] 2026-03-03 16:48:44,677 | INFO     | [data] copytool_out thread has finished
[2026-03-03 17:49:14] 2026-03-03 16:48:44,816 | INFO     | [data] copytool_in thread has finished
[2026-03-03 17:49:14] 2026-03-03 16:48:44,888 | INFO     | [payload] validate_pre thread has finished
[2026-03-03 17:49:14] 2026-03-03 16:48:44,889 | INFO     | [job] validate thread has finished
[2026-03-03 17:49:14] 2026-03-03 16:48:45,017 | INFO     | [payload] failed_post thread has finished
[2026-03-03 17:49:14] 2026-03-03 16:48:45,200 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-03 17:49:14] 2026-03-03 16:48:46,206 | INFO     | [job] queue monitor thread has finished
[2026-03-03 17:49:14] 2026-03-03 16:48:47,396 | INFO     | [data] queue_monitor thread has finished
[2026-03-03 17:49:14] 2026-03-03 16:48:53,574 | INFO     | job.realtimelogging is not enabled
[2026-03-03 17:49:14] 2026-03-03 16:48:54,579 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-03 17:49:14] 2026-03-03 16:49:07,429 | INFO     | [monitor] cgroup control has ended
[2026-03-03 17:49:14] 2026-03-03 16:49:08,435 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22753233237824)>', '<ExcThread(monitor, started 22753001621248)>']
[2026-03-03 17:49:14] 2026-03-03 16:49:11,741 | INFO     | PID=851787 has CPU usage=5.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-03 17:49:14] 2026-03-03 16:49:11,741 | INFO     | .. there are 57 such processes running
[2026-03-03 17:49:14] 2026-03-03 16:49:11,741 | INFO     | found 0 job(s) in 20 queues
[2026-03-03 17:49:14] 2026-03-03 16:49:11,741 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-03 17:49:14] 2026-03-03 16:49:11,741 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-03 17:49:14] 2026-03-03 16:49:11,741 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-03 17:49:14] 2026-03-03 16:49:11,742 | INFO     | [monitor] control thread has ended
[2026-03-03 17:49:14] 2026-03-03 16:49:13,459 | INFO     | all workflow threads have been joined
[2026-03-03 17:49:14] 2026-03-03 16:49:13,460 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-03 17:49:14] 2026-03-03 16:49:13,460 | INFO     | traces error code: 0
[2026-03-03 17:49:14] 2026-03-03 16:49:13,460 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-03 17:49:14] 2026-03-03 16:49:13,680 [wrapper] ==== pilot stdout END ====
[2026-03-03 17:49:14] 2026-03-03 16:49:13,686 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-03 17:49:14] 2026-03-03 16:49:13,689 [wrapper] pilotpid: 851787
[2026-03-03 17:49:14] 2026-03-03 16:49:13,693 [wrapper] Pilot exit status: 0
[2026-03-03 17:49:14] 2026-03-03 16:49:13,739 [wrapper] pandaids: 7035613566 7035613566
[2026-03-03 17:49:14] 2026-03-03 16:49:13,863 [wrapper] cleanup supervisor_pilot 2241984 851790
[2026-03-03 17:49:14] 2026-03-03 16:49:13,866 [wrapper] Test setup, not cleaning
[2026-03-03 17:49:14] 2026-03-03 16:49:13,868 [wrapper] apfmon messages muted
[2026-03-03 17:49:14] 2026-03-03 16:49:13,869 [wrapper] ==== wrapper stdout END ====
[2026-03-03 17:49:14] 2026-03-03 16:49:13,871 [wrapper] ==== wrapper stderr END ====
[2026-03-03 17:49:14]  *** Error codes and diagnostics ***
[2026-03-03 17:49:14]     "exeErrorCode": 0,
[2026-03-03 17:49:14]     "exeErrorDiag": "",
[2026-03-03 17:49:14]     "pilotErrorCode": 0,
[2026-03-03 17:49:14]     "pilotErrorDiag": "",
[2026-03-03 17:49:14]  *** Listing of results directory ***
[2026-03-03 17:49:14] total 567100
[2026-03-03 17:49:14] drwx------. 5 boinc boinc      4096 Feb  2 16:00 pilot3
[2026-03-03 17:49:14] -rw-r--r--. 1 boinc boinc    584627 Mar  1 23:23 pilot3.tar.gz
[2026-03-03 17:49:14] -rwx------. 1 boinc boinc     36322 Mar  1 23:26 runpilot2-wrapper.sh
[2026-03-03 17:49:14] -rw-r--r--. 1 boinc boinc      5111 Mar  1 23:28 queuedata.json
[2026-03-03 17:49:14] -rw-r--r--. 1 boinc boinc       100 Mar  3 14:47 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-03 17:49:14] -rwxr-xr-x. 1 boinc boinc      7986 Mar  3 14:47 run_atlas
[2026-03-03 17:49:14] -rw-r--r--. 1 boinc boinc       105 Mar  3 14:47 job.xml
[2026-03-03 17:49:14] -rw-r--r--. 3 boinc boinc 208499520 Mar  3 14:47 EVNT.48449181._000002.pool.root.1
[2026-03-03 17:49:14] -rw-r--r--. 3 boinc boinc 208499520 Mar  3 14:47 ATLAS.root_0
[2026-03-03 17:49:14] -rw-r--r--. 2 boinc boinc     15845 Mar  3 14:47 start_atlas.sh
[2026-03-03 17:49:14] drwxrwx--x. 2 boinc boinc      4096 Mar  3 14:47 shared
[2026-03-03 17:49:14] -rw-r--r--. 2 boinc boinc    597988 Mar  3 14:47 input.tar.gz
[2026-03-03 17:49:14] -rw-r--r--. 1 boinc boinc         0 Mar  3 14:47 boinc_lockfile
[2026-03-03 17:49:14] -rw-r--r--. 1 boinc boinc      2676 Mar  3 15:44 pandaJob.out
[2026-03-03 17:49:14] -rw-------. 1 boinc boinc    998442 Mar  3 15:44 agis_schedconf.cvmfs.json
[2026-03-03 17:49:14] -rw-------. 1 boinc boinc       445 Mar  3 15:44 workernode_map.json
[2026-03-03 17:49:14] -rw-r--r--. 1 boinc boinc      6715 Mar  3 15:47 init_data.xml
[2026-03-03 17:49:14] -rw-r--r--. 1 boinc boinc       530 Mar  3 17:48 boinc_task_state.xml
[2026-03-03 17:49:14] -rw-------. 1 boinc boinc 157043826 Mar  3 17:48 HITS.48844822._000033.pool.root.1
[2026-03-03 17:49:14] -rw-------. 1 boinc boinc      1027 Mar  3 17:48 memory_monitor_summary.json
[2026-03-03 17:49:14] -rw-------. 1 boinc boinc   1516092 Mar  3 17:48 agis_ddmendpoints.agis.ALL.json
[2026-03-03 17:49:14] -rw-------. 1 boinc boinc    300660 Mar  3 17:48 log.48844822._000033.job.log.tgz.1
[2026-03-03 17:49:14] -rw-------. 1 boinc boinc      6343 Mar  3 17:48 heartbeat.json
[2026-03-03 17:49:14] -rw-------. 1 boinc boinc        96 Mar  3 17:49 pilot_heartbeat.json
[2026-03-03 17:49:14] -rw-r--r--. 1 boinc boinc        28 Mar  3 17:49 wrapper_checkpoint.txt
[2026-03-03 17:49:14] -rw-r--r--. 1 boinc boinc      8192 Mar  3 17:49 boinc_mmap_file
[2026-03-03 17:49:14] -rw-------. 1 boinc boinc      4901 Mar  3 17:49 pilotlog.txt
[2026-03-03 17:49:14] -rw-------. 1 boinc boinc   1059186 Mar  3 17:49 log.48844822._000033.job.log.1
[2026-03-03 17:49:14] -rw-------. 1 boinc boinc       357 Mar  3 17:49 output.list
[2026-03-03 17:49:14] -rw-r--r--. 1 boinc boinc       620 Mar  3 17:49 runtime_log
[2026-03-03 17:49:14] -rw-------. 1 boinc boinc   1382400 Mar  3 17:49 result.tar.gz
[2026-03-03 17:49:14] -rw-r--r--. 1 boinc boinc      9298 Mar  3 17:49 runtime_log.err
[2026-03-03 17:49:14] -rw-------. 1 boinc boinc       787 Mar  3 17:49 pXjNDmeQ4G9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmAtBLDmzO0RMm.diag
[2026-03-03 17:49:14] -rw-r--r--. 1 boinc boinc     22800 Mar  3 17:49 stderr.txt
[2026-03-03 17:49:14] HITS file was successfully produced:
[2026-03-03 17:49:14] -rw-------. 1 boinc boinc 157043826 Mar  3 17:48 shared/HITS.pool.root.1
[2026-03-03 17:49:14]  *** Contents of shared directory: ***
[2026-03-03 17:49:14] total 358940
[2026-03-03 17:49:14] -rw-r--r--. 3 boinc boinc 208499520 Mar  3 14:47 ATLAS.root_0
[2026-03-03 17:49:14] -rw-r--r--. 2 boinc boinc     15845 Mar  3 14:47 start_atlas.sh
[2026-03-03 17:49:14] -rw-r--r--. 2 boinc boinc    597988 Mar  3 14:47 input.tar.gz
[2026-03-03 17:49:14] -rw-------. 1 boinc boinc 157043826 Mar  3 17:48 HITS.pool.root.1
[2026-03-03 17:49:14] -rw-------. 1 boinc boinc   1382400 Mar  3 17:49 result.tar.gz
17:49:15 (515331): run_atlas exited; CPU time 27210.189970
17:49:15 (515331): called boinc_finish(0)

</stderr_txt>
]]>

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