Name 96lLDmrN4G9n9Rq4apOajLDm4fhM0noT9bVooX4SDmVu9KDmS1Hjem_1
Workunit 239480605
Created 2 Mar 2026, 2:22:32 UTC
Sent 2 Mar 2026, 2:26:08 UTC
Report deadline 10 Mar 2026, 2:26:08 UTC
Received 2 Mar 2026, 23:40:12 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 11036092
Run time 2 hours 33 min 36 sec
CPU time 10 hours 4 min 14 sec
Priority 28
Validate state Valid
Credit 632.38
Device peak FLOPS 4.00 GFLOPS
Application version ATLAS Simulation v3.01 (native_mt)
x86_64-pc-linux-gnu
Peak working set size 2.42 GB
Peak swap size 2.82 GB
Peak disk usage 617.21 MB

Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:32:36 (42458): wrapper (7.7.26015): starting
21:32:36 (42458): wrapper: running run_atlas (--nthreads 4)
[2026-03-02 21:32:36] Arguments: --nthreads 4
[2026-03-02 21:32:36] Threads: 4
[2026-03-02 21:32:36] Checking for CVMFS
[2026-03-02 21:32:36] No cvmfs_config command found, will try listing directly
[2026-03-02 21:32:36] CVMFS is ok
[2026-03-02 21:32:36] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-02 21:32:36] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-02 21:32:36] Further information can be found at the LHC@home message board.
[2026-03-02 21:32:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-02 21:32:36] Checking for apptainer binary...
[2026-03-02 21:32:36] which: no apptainer in ((null))
[2026-03-02 21:32:36] apptainer is not installed, using version from CVMFS
[2026-03-02 21:32:36] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-02 21:32:36] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot100/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut20.grid.cesnet.cz
[2026-03-02 21:32:36] apptainer works
[2026-03-02 21:32:36] Set ATHENA_PROC_NUMBER=4
[2026-03-02 21:32:36] Set ATHENA_CORE_NUMBER=4
[2026-03-02 21:32:36] Starting ATLAS job with PandaID=7035613205
[2026-03-02 21:32:36] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot100/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-03 00:06:09]  *** The last 200 lines of the pilot log: ***
[2026-03-03 00:06:09] 2026-03-02 23:05:36,201 | INFO     | extracted standard memory fields from prmon json
[2026-03-03 00:06:09] 2026-03-02 23:05:36,201 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-03 00:06:09] 2026-03-02 23:05:36,201 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-03 00:06:09] 2026-03-02 23:05:36,201 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-03 00:06:09] 2026-03-02 23:05:36,203 | INFO     | fitting pss+swap vs Time
[2026-03-03 00:06:09] 2026-03-02 23:05:36,203 | INFO     | sum of square deviations: 1046484737.5
[2026-03-03 00:06:09] 2026-03-02 23:05:36,204 | INFO     | sum of deviations: 15365630715.500002
[2026-03-03 00:06:09] 2026-03-02 23:05:36,204 | INFO     | mean x: 1772488132.5
[2026-03-03 00:06:09] 2026-03-02 23:05:36,204 | INFO     | mean y: 2307380.2333333334
[2026-03-03 00:06:09] 2026-03-02 23:05:36,204 | INFO     | intersect: -26023297309.105232
[2026-03-03 00:06:09] 2026-03-02 23:05:36,204 | INFO     | chi2: 1.1010497407248627
[2026-03-03 00:06:09] 2026-03-02 23:05:36,204 | INFO     | sum of square deviations: 945282840.0
[2026-03-03 00:06:09] 2026-03-02 23:05:36,204 | INFO     | sum of deviations: 14836380594.000002
[2026-03-03 00:06:09] 2026-03-02 23:05:36,204 | INFO     | mean x: 1772487980.0
[2026-03-03 00:06:09] 2026-03-02 23:05:36,204 | INFO     | mean y: 2306582.420689655
[2026-03-03 00:06:09] 2026-03-02 23:05:36,204 | INFO     | intersect: -27817204316.106003
[2026-03-03 00:06:09] 2026-03-02 23:05:36,205 | INFO     | chi2: 1.1018968803371758
[2026-03-03 00:06:09] 2026-03-02 23:05:36,205 | INFO     | current chi2=1.1018968803371758 (change=-0.07693926813473312 %)
[2026-03-03 00:06:09] 2026-03-02 23:05:36,205 | INFO     | right removable region: 144
[2026-03-03 00:06:09] 2026-03-02 23:05:36,205 | INFO     | sum of square deviations: 945282840.0
[2026-03-03 00:06:09] 2026-03-02 23:05:36,205 | INFO     | sum of deviations: 456819240.000001
[2026-03-03 00:06:09] 2026-03-02 23:05:36,205 | INFO     | mean x: 1772488285.0
[2026-03-03 00:06:09] 2026-03-02 23:05:36,205 | INFO     | mean y: 2329393.972413793
[2026-03-03 00:06:09] 2026-03-02 23:05:36,205 | INFO     | intersect: -854246772.4399642
[2026-03-03 00:06:09] 2026-03-02 23:05:36,205 | INFO     | chi2: 0.0004557041269721834
[2026-03-03 00:06:09] 2026-03-02 23:05:36,205 | INFO     | current chi2=0.0004557041269721834 (change=99.95861184920926 %)
[2026-03-03 00:06:09] 2026-03-02 23:05:36,205 | INFO     | sum of square deviations: 850825255.0
[2026-03-03 00:06:09] 2026-03-02 23:05:36,206 | INFO     | sum of deviations: 87443652.5
[2026-03-03 00:06:09] 2026-03-02 23:05:36,206 | INFO     | mean x: 1772488437.5
[2026-03-03 00:06:09] 2026-03-02 23:05:36,206 | INFO     | mean y: 2329985.8928571427
[2026-03-03 00:06:09] 2026-03-02 23:05:36,206 | INFO     | intersect: -179837694.34251383
[2026-03-03 00:06:09] 2026-03-02 23:05:36,206 | INFO     | chi2: 0.0001845532166759355
[2026-03-03 00:06:09] 2026-03-02 23:05:36,206 | INFO     | current chi2=0.0001845532166759355 (change=59.50152615422753 %)
[2026-03-03 00:06:09] 2026-03-02 23:05:36,206 | INFO     | sum of square deviations: 762879420.0
[2026-03-03 00:06:09] 2026-03-02 23:05:36,206 | INFO     | sum of deviations: 56423109.00000001
[2026-03-03 00:06:09] 2026-03-02 23:05:36,206 | INFO     | mean x: 1772488590.0
[2026-03-03 00:06:09] 2026-03-02 23:05:36,206 | INFO     | mean y: 2330039.407407407
[2026-03-03 00:06:09] 2026-03-02 23:05:36,207 | INFO     | intersect: -128764487.84412906
[2026-03-03 00:06:09] 2026-03-02 23:05:36,207 | INFO     | chi2: 0.00017414412860246116
[2026-03-03 00:06:09] 2026-03-02 23:05:36,207 | INFO     | current chi2=0.00017414412860246116 (change=5.6401553226525865 %)
[2026-03-03 00:06:09] 2026-03-02 23:05:36,207 | INFO     | left removable region: 30
[2026-03-03 00:06:09] 2026-03-02 23:05:36,207 | INFO     | sum of square deviations: 459366752.5
[2026-03-03 00:06:09] 2026-03-02 23:05:36,207 | INFO     | sum of deviations: 112170826.00000001
[2026-03-03 00:06:09] 2026-03-02 23:05:36,207 | INFO     | mean x: 1772488864.5
[2026-03-03 00:06:09] 2026-03-02 23:05:36,207 | INFO     | mean y: 2329856.649122807
[2026-03-03 00:06:09] 2026-03-02 23:05:36,207 | INFO     | intersect: -430486708.6001593
[2026-03-03 00:06:09] 2026-03-02 23:05:36,207 | INFO     | chi2: 0.0001502293773849304
[2026-03-03 00:06:09] 2026-03-02 23:05:36,207 | INFO     | current memory leak: 0.24 B/s (using 114 data points, chi2=0.00)
[2026-03-03 00:06:09] 2026-03-02 23:05:36,207 | INFO     | could have reported an average CPU frequency of 3608 MHz (9 samples)
[2026-03-03 00:06:09] 2026-03-02 23:05:36,208 | INFO     | ..............................
[2026-03-03 00:06:09] 2026-03-02 23:05:36,208 | INFO     | . Timing measurements:
[2026-03-03 00:06:09] 2026-03-02 23:05:36,208 | INFO     | . get job = 0 s
[2026-03-03 00:06:09] 2026-03-02 23:05:36,208 | INFO     | . initial setup = 4 s
[2026-03-03 00:06:09] 2026-03-02 23:05:36,208 | INFO     | . payload setup = 5 s
[2026-03-03 00:06:09] 2026-03-02 23:05:36,208 | INFO     | . stage-in = 0 s
[2026-03-03 00:06:09] 2026-03-02 23:05:36,208 | INFO     | . payload execution = 9146 s
[2026-03-03 00:06:09] 2026-03-02 23:05:36,208 | INFO     | . stage-out = 0 s
[2026-03-03 00:06:09] 2026-03-02 23:05:36,208 | INFO     | . log creation = 0 s
[2026-03-03 00:06:09] 2026-03-02 23:05:36,208 | INFO     | ..............................
[2026-03-03 00:06:09] 2026-03-02 23:05:36,471 | INFO     | 
[2026-03-03 00:06:09] 2026-03-02 23:05:36,471 | INFO     | job summary report
[2026-03-03 00:06:09] 2026-03-02 23:05:36,471 | INFO     | --------------------------------------------------
[2026-03-03 00:06:09] 2026-03-02 23:05:36,471 | INFO     | PanDA job id: 7035613205
[2026-03-03 00:06:09] 2026-03-02 23:05:36,471 | INFO     | task id: 48844016
[2026-03-03 00:06:09] 2026-03-02 23:05:36,471 | INFO     | errors: (none)
[2026-03-03 00:06:09] 2026-03-02 23:05:36,471 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-03 00:06:09] 2026-03-02 23:05:36,471 | INFO     | pilot state: finished 
[2026-03-03 00:06:09] 2026-03-02 23:05:36,471 | INFO     | transexitcode: 0
[2026-03-03 00:06:09] 2026-03-02 23:05:36,471 | INFO     | exeerrorcode: 0
[2026-03-03 00:06:09] 2026-03-02 23:05:36,471 | INFO     | exeerrordiag: 
[2026-03-03 00:06:09] 2026-03-02 23:05:36,471 | INFO     | exitcode: 0
[2026-03-03 00:06:09] 2026-03-02 23:05:36,471 | INFO     | exitmsg: OK
[2026-03-03 00:06:09] 2026-03-02 23:05:36,472 | INFO     | cpuconsumptiontime: 35471 s
[2026-03-03 00:06:09] 2026-03-02 23:05:36,472 | INFO     | nevents: 400
[2026-03-03 00:06:09] 2026-03-02 23:05:36,472 | INFO     | neventsw: 0
[2026-03-03 00:06:09] 2026-03-02 23:05:36,472 | INFO     | pid: 57707
[2026-03-03 00:06:09] 2026-03-02 23:05:36,472 | INFO     | pgrp: 57707
[2026-03-03 00:06:09] 2026-03-02 23:05:36,472 | INFO     | corecount: 4
[2026-03-03 00:06:09] 2026-03-02 23:05:36,472 | INFO     | event service: False
[2026-03-03 00:06:09] 2026-03-02 23:05:36,472 | INFO     | sizes: {0: 2282065, 1: 2282327, 11: 2282355, 9155: 2310671, 9157: 2319951}
[2026-03-03 00:06:09] 2026-03-02 23:05:36,472 | INFO     | --------------------------------------------------
[2026-03-03 00:06:09] 2026-03-02 23:05:36,472 | INFO     | 
[2026-03-03 00:06:09] 2026-03-02 23:05:36,472 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot100/slots/0
[2026-03-03 00:06:09] 2026-03-02 23:05:36,491 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-03 00:06:09] 2026-03-02 23:05:36,491 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-03 00:06:09] 2026-03-02 23:05:36,491 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-03 00:06:09] 2026-03-02 23:05:36,491 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-03 00:06:09] 2026-03-02 23:05:36,491 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-03 00:06:09] 2026-03-02 23:05:36,491 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-03 00:06:09] 2026-03-02 23:05:36,491 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-03 00:06:09] 2026-03-02 23:05:36,491 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-03 00:06:09] 2026-03-02 23:05:36,491 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-03 00:06:09] 2026-03-02 23:05:36,491 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-03 00:06:09] 2026-03-02 23:05:36,491 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-03 00:06:09] 2026-03-02 23:05:36,491 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-03 00:06:09] 2026-03-02 23:05:36,491 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-03 00:06:09] 2026-03-02 23:05:36,491 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-03 00:06:09] 2026-03-02 23:05:36,491 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-03 00:06:09] 2026-03-02 23:05:36,491 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-03 00:06:09] 2026-03-02 23:05:36,491 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-03 00:06:09] 2026-03-02 23:05:36,491 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-03 00:06:09] 2026-03-02 23:05:36,491 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-03 00:06:09] 2026-03-02 23:05:36,492 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-03 00:06:09] 2026-03-02 23:05:36,492 | INFO     | job 7035613205 has completed (purged errors)
[2026-03-03 00:06:09] 2026-03-02 23:05:36,492 | INFO     | overall cleanup function is called
[2026-03-03 00:06:09] 2026-03-02 23:05:36,731 | WARNING  | process 57707 can no longer be monitored (due to stat problems) - aborting
[2026-03-03 00:06:09] 2026-03-02 23:05:37,037 | INFO     | using path: /var/lib/boinc/var/slot100/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-03 00:06:09] 2026-03-02 23:05:37,461 | INFO     | number of running child processes to parent process 57707: 1
[2026-03-03 00:06:09] 2026-03-02 23:05:37,461 | INFO     | maximum number of monitored processes: 6
[2026-03-03 00:06:09] 2026-03-02 23:05:37,462 | INFO     | aborting job monitoring since job object (job id=7035613205) has expired
[2026-03-03 00:06:09] 2026-03-02 23:05:37,499 | INFO     | --- collectZombieJob: --- 10, [57707]
[2026-03-03 00:06:09] 2026-03-02 23:05:37,499 | INFO     | zombie collector waiting for pid 57707
[2026-03-03 00:06:09] 2026-03-02 23:05:37,499 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-03 00:06:09] 2026-03-02 23:05:37,499 | INFO     | collected zombie processes
[2026-03-03 00:06:09] 2026-03-02 23:05:37,499 | INFO     | will attempt to kill all subprocesses of pid=57707
[2026-03-03 00:06:09] 2026-03-02 23:05:37,901 | INFO     | process IDs to be killed: [57707] (in reverse order)
[2026-03-03 00:06:09] 2026-03-02 23:05:38,099 | WARNING  | found no corresponding commands to process id(s)
[2026-03-03 00:06:09] 2026-03-02 23:05:38,099 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-03 00:06:09] 2026-03-02 23:05:38,127 | INFO     | did not find any defunct processes belonging to 57707
[2026-03-03 00:06:09] 2026-03-02 23:05:38,154 | INFO     | did not find any defunct processes belonging to 57707
[2026-03-03 00:06:09] 2026-03-02 23:05:38,154 | INFO     | ready for new job
[2026-03-03 00:06:09] 2026-03-02 23:05:38,154 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-03 00:06:09] 2026-03-02 23:05:38,156 | INFO     | **************************************
[2026-03-03 00:06:09] 2026-03-02 23:05:38,156 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-03 00:06:09] 2026-03-02 23:05:38,156 | INFO     | **************************************
[2026-03-03 00:06:09] 2026-03-02 23:05:38,156 | INFO     | 
[2026-03-03 00:06:09] 2026-03-02 23:05:38,161 | INFO     | architecture information:
[2026-03-03 00:06:09] 2026-03-02 23:05:38,162 | INFO     | executing command: cat /etc/os-release
[2026-03-03 00:06:09] 2026-03-02 23:05:38,174 | INFO     | cat /etc/os-release:
[2026-03-03 00:06:09] NAME="CentOS Linux"
[2026-03-03 00:06:09] VERSION="7 (Core)"
[2026-03-03 00:06:09] ID="centos"
[2026-03-03 00:06:09] ID_LIKE="rhel fedora"
[2026-03-03 00:06:09] VERSION_ID="7"
[2026-03-03 00:06:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-03 00:06:09] ANSI_COLOR="0;31"
[2026-03-03 00:06:09] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-03 00:06:09] HOME_URL="https://www.centos.org/"
[2026-03-03 00:06:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-03 00:06:09] 
[2026-03-03 00:06:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-03 00:06:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-03 00:06:09] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-03 00:06:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-03 00:06:09] 
[2026-03-03 00:06:09] 2026-03-02 23:05:38,174 | INFO     | **************************************
[2026-03-03 00:06:09] 2026-03-02 23:05:38,677 | INFO     | executing command: df -mP /var/lib/boinc/var/slot100/slots/0
[2026-03-03 00:06:09] 2026-03-02 23:05:38,693 | INFO     | sufficient remaining disk space (21014511616 B)
[2026-03-03 00:06:09] 2026-03-02 23:05:38,693 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-03 00:06:09] 2026-03-02 23:05:38,694 | INFO     | current server update state: UPDATING_FINAL
[2026-03-03 00:06:09] 2026-03-02 23:05:38,694 | INFO     | update_server=False
[2026-03-03 00:06:09] 2026-03-02 23:05:38,694 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-03 00:06:09] 2026-03-02 23:05:38,694 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-03 00:06:09] 2026-03-02 23:05:38,694 | INFO     | aborting loop
[2026-03-03 00:06:09] 2026-03-02 23:05:38,781 | INFO     | all data control threads have been joined
[2026-03-03 00:06:09] 2026-03-02 23:05:39,025 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-03 00:06:09] 2026-03-02 23:05:39,164 | INFO     | all job control threads have been joined
[2026-03-03 00:06:09] 2026-03-02 23:05:39,699 | INFO     | [job] retrieve thread has finished
[2026-03-03 00:06:09] 2026-03-02 23:05:39,699 | INFO     | [job] job monitor thread has finished
[2026-03-03 00:06:09] 2026-03-02 23:05:39,786 | INFO     | [data] control thread has finished
[2026-03-03 00:06:09] 2026-03-02 23:05:39,841 | INFO     | [payload] validate_post thread has finished
[2026-03-03 00:06:09] 2026-03-02 23:05:40,068 | INFO     | all payload control threads have been joined
[2026-03-03 00:06:09] 2026-03-02 23:05:40,153 | INFO     | [payload] failed_post thread has finished
[2026-03-03 00:06:09] 2026-03-02 23:05:40,169 | INFO     | [job] control thread has finished
[2026-03-03 00:06:09] 2026-03-02 23:05:40,365 | INFO     | [job] validate thread has finished
[2026-03-03 00:06:09] 2026-03-02 23:05:40,534 | INFO     | [job] create_data_payload thread has finished
[2026-03-03 00:06:09] 2026-03-02 23:05:40,628 | INFO     | [payload] validate_pre thread has finished
[2026-03-03 00:06:09] 2026-03-02 23:05:40,899 | INFO     | [data] copytool_in thread has finished
[2026-03-03 00:06:09] 2026-03-02 23:05:40,993 | INFO     | [payload] execute_payloads thread has finished
[2026-03-03 00:06:09] 2026-03-02 23:05:41,030 | INFO     | [data] copytool_out thread has finished
[2026-03-03 00:06:09] 2026-03-02 23:05:41,073 | INFO     | [payload] control thread has finished
[2026-03-03 00:06:09] 2026-03-02 23:05:41,263 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-03 00:06:09] 2026-03-02 23:05:42,073 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-03 00:06:09] 2026-03-02 23:05:42,268 | INFO     | [job] queue monitor thread has finished
[2026-03-03 00:06:09] 2026-03-02 23:05:46,081 | INFO     | [data] queue_monitor thread has finished
[2026-03-03 00:06:09] 2026-03-02 23:05:49,566 | INFO     | job.realtimelogging is not enabled
[2026-03-03 00:06:09] 2026-03-02 23:05:50,571 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-03 00:06:09] 2026-03-02 23:06:02,491 | INFO     | [monitor] cgroup control has ended
[2026-03-03 00:06:09] 2026-03-02 23:06:03,093 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22476295341888)>', '<ExcThread(monitor, started 22476055914240)>']
[2026-03-03 00:06:09] 2026-03-02 23:06:08,118 | INFO     | all workflow threads have been joined
[2026-03-03 00:06:09] 2026-03-02 23:06:08,118 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-03 00:06:09] 2026-03-02 23:06:08,118 | INFO     | traces error code: 0
[2026-03-03 00:06:09] 2026-03-02 23:06:08,118 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-03 00:06:09] 2026-03-02 23:06:08,938 | INFO     | PID=46993 has CPU usage=7.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-03 00:06:09] 2026-03-02 23:06:08,939 | INFO     | .. there are 46 such processes running
[2026-03-03 00:06:09] 2026-03-02 23:06:08,939 | INFO     | found 0 job(s) in 20 queues
[2026-03-03 00:06:09] 2026-03-02 23:06:08,939 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-03 00:06:09] 2026-03-02 23:06:08,939 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-03 00:06:09] 2026-03-02 23:06:08,939 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-03 00:06:09] 2026-03-02 23:06:08,940 | INFO     | [monitor] control thread has ended
[2026-03-03 00:06:09] 2026-03-02 23:06:09,058 [wrapper] ==== pilot stdout END ====
[2026-03-03 00:06:09] 2026-03-02 23:06:09,059 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-03 00:06:09] 2026-03-02 23:06:09,060 [wrapper] pilotpid: 46993
[2026-03-03 00:06:09] 2026-03-02 23:06:09,062 [wrapper] Pilot exit status: 0
[2026-03-03 00:06:09] 2026-03-02 23:06:09,067 [wrapper] pandaids: 7035613205
[2026-03-03 00:06:09] 2026-03-02 23:06:09,176 [wrapper] cleanup supervisor_pilot 1209445 46994
[2026-03-03 00:06:09] 2026-03-02 23:06:09,179 [wrapper] Test setup, not cleaning
[2026-03-03 00:06:09] 2026-03-02 23:06:09,181 [wrapper] apfmon messages muted
[2026-03-03 00:06:09] 2026-03-02 23:06:09,182 [wrapper] ==== wrapper stdout END ====
[2026-03-03 00:06:09] 2026-03-02 23:06:09,184 [wrapper] ==== wrapper stderr END ====
[2026-03-03 00:06:09]  *** Error codes and diagnostics ***
[2026-03-03 00:06:09]     "exeErrorCode": 0,
[2026-03-03 00:06:09]     "exeErrorDiag": "",
[2026-03-03 00:06:09]     "pilotErrorCode": 0,
[2026-03-03 00:06:09]     "pilotErrorDiag": "",
[2026-03-03 00:06:09]  *** Listing of results directory ***
[2026-03-03 00:06:09] total 416140
[2026-03-03 00:06:09] -rw-r--r--. 1 boinc boinc    584627 Mar  1 23:23 pilot3.tar.gz
[2026-03-03 00:06:09] -rwx------. 1 boinc boinc     36322 Mar  1 23:24 runpilot2-wrapper.sh
[2026-03-03 00:06:09] -rw-r--r--. 1 boinc boinc      5111 Mar  1 23:25 queuedata.json
[2026-03-03 00:06:09] -rw-r--r--. 1 boinc boinc       100 Mar  2 21:32 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-03 00:06:09] -rwxr-xr-x. 1 boinc boinc      7986 Mar  2 21:32 run_atlas
[2026-03-03 00:06:09] -rw-r--r--. 1 boinc boinc       105 Mar  2 21:32 job.xml
[2026-03-03 00:06:09] -rw-r--r--. 1 boinc boinc      6706 Mar  2 21:32 init_data.xml
[2026-03-03 00:06:09] -rw-r--r--. 2 boinc boinc 220544528 Mar  2 21:32 EVNT.48452317._000002.pool.root.1
[2026-03-03 00:06:09] -rw-r--r--. 2 boinc boinc     15845 Mar  2 21:32 start_atlas.sh
[2026-03-03 00:06:09] drwxrwx--x. 2 boinc boinc      4096 Mar  2 21:32 shared
[2026-03-03 00:06:09] -rw-r--r--. 2 boinc boinc    597951 Mar  2 21:32 input.tar.gz
[2026-03-03 00:06:09] -rw-r--r--. 1 boinc boinc         0 Mar  2 21:32 boinc_lockfile
[2026-03-03 00:06:09] -rw-r--r--. 1 boinc boinc      2589 Mar  2 21:32 pandaJob.out
[2026-03-03 00:06:09] -rw-------. 1 boinc boinc    998454 Mar  2 21:32 agis_schedconf.cvmfs.json
[2026-03-03 00:06:09] -rw-------. 1 boinc boinc   1512931 Mar  2 21:32 agis_ddmendpoints.agis.ALL.json
[2026-03-03 00:06:09] -rw-------. 1 boinc boinc       445 Mar  2 21:32 workernode_map.json
[2026-03-03 00:06:09] drwx------. 5 boinc boinc      4096 Mar  2 21:32 pilot3
[2026-03-03 00:06:09] -rw-------. 1 boinc boinc 198391192 Mar  3 00:05 HITS.48844016._000035.pool.root.1
[2026-03-03 00:06:09] -rw-r--r--. 1 boinc boinc       529 Mar  3 00:05 boinc_task_state.xml
[2026-03-03 00:06:09] -rw-------. 1 boinc boinc      1029 Mar  3 00:05 memory_monitor_summary.json
[2026-03-03 00:06:09] -rw-------. 1 boinc boinc    329546 Mar  3 00:05 log.48844016._000035.job.log.tgz.1
[2026-03-03 00:06:09] -rw-------. 1 boinc boinc      6345 Mar  3 00:05 heartbeat.json
[2026-03-03 00:06:09] -rw-r--r--. 1 boinc boinc        27 Mar  3 00:05 wrapper_checkpoint.txt
[2026-03-03 00:06:09] -rw-r--r--. 1 boinc boinc      8192 Mar  3 00:05 boinc_mmap_file
[2026-03-03 00:06:09] -rw-------. 1 boinc boinc       821 Mar  3 00:06 pilotlog.txt
[2026-03-03 00:06:09] -rw-------. 1 boinc boinc        95 Mar  3 00:06 pilot_heartbeat.json
[2026-03-03 00:06:09] -rw-------. 1 boinc boinc   1305360 Mar  3 00:06 log.48844016._000035.job.log.1
[2026-03-03 00:06:09] -rw-------. 1 boinc boinc       357 Mar  3 00:06 output.list
[2026-03-03 00:06:09] -rw-r--r--. 1 boinc boinc       620 Mar  3 00:06 runtime_log
[2026-03-03 00:06:09] -rw-------. 1 boinc boinc   1648640 Mar  3 00:06 result.tar.gz
[2026-03-03 00:06:09] -rw-r--r--. 1 boinc boinc      9221 Mar  3 00:06 runtime_log.err
[2026-03-03 00:06:09] -rw-------. 1 boinc boinc       662 Mar  3 00:06 96lLDmrN4G9n9Rq4apOajLDm4fhM0noT9bVooX4SDmVu9KDmS1Hjem.diag
[2026-03-03 00:06:09] -rw-r--r--. 1 boinc boinc     20825 Mar  3 00:06 stderr.txt
[2026-03-03 00:06:09] HITS file was successfully produced:
[2026-03-03 00:06:09] -rw-------. 1 boinc boinc 198391192 Mar  3 00:05 shared/HITS.pool.root.1
[2026-03-03 00:06:09]  *** Contents of shared directory: ***
[2026-03-03 00:06:09] total 411340
[2026-03-03 00:06:09] -rw-r--r--. 2 boinc boinc 220544528 Mar  2 21:32 ATLAS.root_0
[2026-03-03 00:06:09] -rw-r--r--. 2 boinc boinc     15845 Mar  2 21:32 start_atlas.sh
[2026-03-03 00:06:09] -rw-r--r--. 2 boinc boinc    597951 Mar  2 21:32 input.tar.gz
[2026-03-03 00:06:09] -rw-------. 1 boinc boinc 198391192 Mar  3 00:05 HITS.pool.root.1
[2026-03-03 00:06:09] -rw-------. 1 boinc boinc   1648640 Mar  3 00:06 result.tar.gz
00:06:11 (42458): run_atlas exited; CPU time 35885.745468
00:06:11 (42458): called boinc_finish(0)

</stderr_txt>
]]>


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