Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
04:21:31 (1200733): wrapper (7.7.26015): starting
04:21:31 (1200733): wrapper: running run_atlas (--nthreads 4)
[2026-03-03 04:21:31] Arguments: --nthreads 4
[2026-03-03 04:21:31] Threads: 4
[2026-03-03 04:21:31] Checking for CVMFS
[2026-03-03 04:21:31] No cvmfs_config command found, will try listing directly
[2026-03-03 04:21:31] CVMFS is ok
[2026-03-03 04:21:31] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-03 04:21:31] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-03 04:21:31] Further information can be found at the LHC@home message board.
[2026-03-03 04:21:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-03 04:21:31] Checking for apptainer binary...
[2026-03-03 04:21:31] which: no apptainer in ((null))
[2026-03-03 04:21:31] apptainer is not installed, using version from CVMFS
[2026-03-03 04:21:31] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-03 04:21:31] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot44/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut03.grid.cesnet.cz
[2026-03-03 04:21:31] apptainer works
[2026-03-03 04:21:31] Set ATHENA_PROC_NUMBER=4
[2026-03-03 04:21:31] Set ATHENA_CORE_NUMBER=4
[2026-03-03 04:21:31] Starting ATLAS job with PandaID=7035613246
[2026-03-03 04:21:31] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot44/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-03 08:02:42]  *** The last 200 lines of the pilot log: ***
[2026-03-03 08:02:42] 2026-03-03 06:50:11,901 | INFO     | job 7035613246 has state=finished
[2026-03-03 08:02:42] 2026-03-03 06:50:11,901 | INFO     | preparing for final server update for job 7035613246 in state='finished'
[2026-03-03 08:02:42] 2026-03-03 06:50:11,901 | INFO     | reading metadata from: /scratch/boinc/var/slot44/slots/0/PanDA_Pilot-7035613246/jobReport.json
[2026-03-03 08:02:42] 2026-03-03 06:50:11,904 | INFO     | added worker_node to metadata from /scratch/boinc/var/slot44/slots/0/workernode_map.json
[2026-03-03 08:02:42] 2026-03-03 06:50:11,904 | INFO     | this job has now completed (state=finished)
[2026-03-03 08:02:42] 2026-03-03 06:50:11,904 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-03 08:02:42] 2026-03-03 06:50:11,904 | INFO     | log transfer has been attempted: DONE
[2026-03-03 08:02:42] 2026-03-03 06:50:11,905 | INFO     | job 7035613246 has finished - writing final server update
[2026-03-03 08:02:42] 2026-03-03 06:50:11,905 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_2402856/.job.ad'
[2026-03-03 08:02:42] 2026-03-03 06:50:11,905 | INFO     | total number of processed events: 400 (read)
[2026-03-03 08:02:42] 2026-03-03 06:50:11,917 | INFO     | using path: /scratch/boinc/var/slot44/slots/0/PanDA_Pilot-7035613246/memory_monitor_summary.json (trf name=prmon)
[2026-03-03 08:02:42] 2026-03-03 06:50:11,918 | INFO     | extracted standard info from prmon json
[2026-03-03 08:02:42] 2026-03-03 06:50:11,918 | INFO     | extracted standard memory fields from prmon json
[2026-03-03 08:02:42] 2026-03-03 06:50:11,918 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-03 08:02:42] 2026-03-03 06:50:11,918 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-03 08:02:42] 2026-03-03 06:50:11,918 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-03 08:02:42] 2026-03-03 06:50:11,922 | INFO     | fitting pss+swap vs Time
[2026-03-03 08:02:42] 2026-03-03 06:50:11,923 | INFO     | sum of square deviations: 2671343110.0
[2026-03-03 08:02:42] 2026-03-03 06:50:11,924 | INFO     | sum of deviations: 820462992.9999963
[2026-03-03 08:02:42] 2026-03-03 06:50:11,924 | INFO     | mean x: 1772514350.0
[2026-03-03 08:02:42] 2026-03-03 06:50:11,924 | INFO     | mean y: 2328516.2682926827
[2026-03-03 08:02:42] 2026-03-03 06:50:11,924 | INFO     | intersect: -542072696.4746271
[2026-03-03 08:02:42] 2026-03-03 06:50:11,925 | INFO     | chi2: 1.3562872755332678
[2026-03-03 08:02:42] 2026-03-03 06:50:11,925 | INFO     | sum of square deviations: 2480604650.0
[2026-03-03 08:02:42] 2026-03-03 06:50:11,926 | INFO     | sum of deviations: 914082773.5000083
[2026-03-03 08:02:42] 2026-03-03 06:50:11,926 | INFO     | mean x: 1772514197.5
[2026-03-03 08:02:42] 2026-03-03 06:50:11,926 | INFO     | mean y: 2328591.095
[2026-03-03 08:02:42] 2026-03-03 06:50:11,927 | INFO     | intersect: -650828571.0988793
[2026-03-03 08:02:42] 2026-03-03 06:50:11,927 | INFO     | chi2: 1.3565461845452829
[2026-03-03 08:02:42] 2026-03-03 06:50:11,927 | INFO     | current chi2=1.3565461845452829 (change=-0.01908954074005351 %)
[2026-03-03 08:02:42] 2026-03-03 06:50:11,927 | INFO     | right removable region: 199
[2026-03-03 08:02:42] 2026-03-03 06:50:11,927 | INFO     | sum of square deviations: 2480604650.0
[2026-03-03 08:02:42] 2026-03-03 06:50:11,929 | INFO     | sum of deviations: -23522906711.500004
[2026-03-03 08:02:42] 2026-03-03 06:50:11,929 | INFO     | mean x: 1772514502.5
[2026-03-03 08:02:42] 2026-03-03 06:50:11,929 | INFO     | mean y: 2347697.945
[2026-03-03 08:02:42] 2026-03-03 06:50:11,929 | INFO     | intersect: 16810625988.920687
[2026-03-03 08:02:42] 2026-03-03 06:50:11,929 | INFO     | chi2: 0.04417907254984064
[2026-03-03 08:02:42] 2026-03-03 06:50:11,929 | INFO     | current chi2=0.04417907254984064 (change=96.74264638865169 %)
[2026-03-03 08:02:42] 2026-03-03 06:50:11,930 | INFO     | sum of square deviations: 2299168690.0
[2026-03-03 08:02:42] 2026-03-03 06:50:11,931 | INFO     | sum of deviations: -19707102006.0
[2026-03-03 08:02:42] 2026-03-03 06:50:11,931 | INFO     | mean x: 1772514655.0
[2026-03-03 08:02:42] 2026-03-03 06:50:11,931 | INFO     | mean y: 2344488.9487179485
[2026-03-03 08:02:42] 2026-03-03 06:50:11,931 | INFO     | intersect: 15195282382.172594
[2026-03-03 08:02:42] 2026-03-03 06:50:11,932 | INFO     | chi2: 0.03961704567974701
[2026-03-03 08:02:42] 2026-03-03 06:50:11,932 | INFO     | current chi2=0.03961704567974701 (change=10.326216932116385 %)
[2026-03-03 08:02:42] 2026-03-03 06:50:11,932 | INFO     | left removable region: 20
[2026-03-03 08:02:42] 2026-03-03 06:50:11,932 | INFO     | sum of square deviations: 1778377530.0
[2026-03-03 08:02:42] 2026-03-03 06:50:11,934 | INFO     | sum of deviations: -12545410852.999998
[2026-03-03 08:02:42] 2026-03-03 06:50:11,934 | INFO     | mean x: 1772514777.0
[2026-03-03 08:02:42] 2026-03-03 06:50:11,934 | INFO     | mean y: 2338836.586592179
[2026-03-03 08:02:42] 2026-03-03 06:50:11,934 | INFO     | intersect: 12506391404.366547
[2026-03-03 08:02:42] 2026-03-03 06:50:11,934 | INFO     | chi2: 0.02933256283322154
[2026-03-03 08:02:42] 2026-03-03 06:50:11,935 | INFO     | current memory leak: -7.05 B/s (using 179 data points, chi2=0.03)
[2026-03-03 08:02:42] 2026-03-03 06:50:11,935 | INFO     | could have reported an average CPU frequency of 2564 MHz (10 samples)
[2026-03-03 08:02:42] 2026-03-03 06:50:11,935 | INFO     | ..............................
[2026-03-03 08:02:42] 2026-03-03 06:50:11,935 | INFO     | . Timing measurements:
[2026-03-03 08:02:42] 2026-03-03 06:50:11,935 | INFO     | . get job = 0 s
[2026-03-03 08:02:42] 2026-03-03 06:50:11,935 | INFO     | . initial setup = 5 s
[2026-03-03 08:02:42] 2026-03-03 06:50:11,936 | INFO     | . payload setup = 5 s
[2026-03-03 08:02:42] 2026-03-03 06:50:11,936 | INFO     | . stage-in = 0 s
[2026-03-03 08:02:42] 2026-03-03 06:50:11,936 | INFO     | . payload execution = 12480 s
[2026-03-03 08:02:42] 2026-03-03 06:50:11,936 | INFO     | . stage-out = 0 s
[2026-03-03 08:02:42] 2026-03-03 06:50:11,936 | INFO     | . log creation = 0 s
[2026-03-03 08:02:42] 2026-03-03 06:50:11,936 | INFO     | ..............................
[2026-03-03 08:02:42] 2026-03-03 06:50:12,028 | INFO     | 
[2026-03-03 08:02:42] 2026-03-03 06:50:12,029 | INFO     | job summary report
[2026-03-03 08:02:42] 2026-03-03 06:50:12,029 | INFO     | --------------------------------------------------
[2026-03-03 08:02:42] 2026-03-03 06:50:12,029 | INFO     | PanDA job id: 7035613246
[2026-03-03 08:02:42] 2026-03-03 06:50:12,029 | INFO     | task id: 48843834
[2026-03-03 08:02:42] 2026-03-03 06:50:12,029 | INFO     | errors: (none)
[2026-03-03 08:02:42] 2026-03-03 06:50:12,029 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-03 08:02:42] 2026-03-03 06:50:12,029 | INFO     | pilot state: finished 
[2026-03-03 08:02:42] 2026-03-03 06:50:12,029 | INFO     | transexitcode: 0
[2026-03-03 08:02:42] 2026-03-03 06:50:12,029 | INFO     | exeerrorcode: 0
[2026-03-03 08:02:42] 2026-03-03 06:50:12,029 | INFO     | exeerrordiag: 
[2026-03-03 08:02:42] 2026-03-03 06:50:12,030 | INFO     | exitcode: 0
[2026-03-03 08:02:42] 2026-03-03 06:50:12,030 | INFO     | exitmsg: OK
[2026-03-03 08:02:42] 2026-03-03 06:50:12,030 | INFO     | cpuconsumptiontime: 48437 s
[2026-03-03 08:02:42] 2026-03-03 06:50:12,030 | INFO     | nevents: 400
[2026-03-03 08:02:42] 2026-03-03 06:50:12,030 | INFO     | neventsw: 0
[2026-03-03 08:02:42] 2026-03-03 06:50:12,030 | INFO     | pid: 1209290
[2026-03-03 08:02:42] 2026-03-03 06:50:12,030 | INFO     | pgrp: 1209290
[2026-03-03 08:02:42] 2026-03-03 06:50:12,030 | INFO     | corecount: 4
[2026-03-03 08:02:42] 2026-03-03 06:50:12,030 | INFO     | event service: False
[2026-03-03 08:02:42] 2026-03-03 06:50:12,030 | INFO     | sizes: {0: 2281808, 1: 2282325, 12: 2282325, 12489: 2312273, 12490: 2321293, 12493: 2321349, 12494: 2321671}
[2026-03-03 08:02:42] 2026-03-03 06:50:12,030 | INFO     | --------------------------------------------------
[2026-03-03 08:02:42] 2026-03-03 06:50:12,030 | INFO     | 
[2026-03-03 08:02:42] 2026-03-03 06:50:12,031 | INFO     | executing command: ls -lF /scratch/boinc/var/slot44/slots/0
[2026-03-03 08:02:42] 2026-03-03 06:50:12,052 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-03 08:02:42] 2026-03-03 06:50:12,053 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-03 08:02:42] 2026-03-03 06:50:12,053 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-03 08:02:42] 2026-03-03 06:50:12,053 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-03 08:02:42] 2026-03-03 06:50:12,053 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-03 08:02:42] 2026-03-03 06:50:12,053 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-03 08:02:42] 2026-03-03 06:50:12,053 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-03 08:02:42] 2026-03-03 06:50:12,053 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-03 08:02:42] 2026-03-03 06:50:12,053 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-03 08:02:42] 2026-03-03 06:50:12,053 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-03 08:02:42] 2026-03-03 06:50:12,053 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-03 08:02:42] 2026-03-03 06:50:12,054 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-03 08:02:42] 2026-03-03 06:50:12,054 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-03 08:02:42] 2026-03-03 06:50:12,054 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-03 08:02:42] 2026-03-03 06:50:12,054 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-03 08:02:42] 2026-03-03 06:50:12,054 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-03 08:02:42] 2026-03-03 06:50:12,054 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-03 08:02:42] 2026-03-03 06:50:12,054 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-03 08:02:42] 2026-03-03 06:50:12,054 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-03 08:02:42] 2026-03-03 06:50:12,054 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-03 08:02:42] 2026-03-03 06:50:12,054 | INFO     | job 7035613246 has completed (purged errors)
[2026-03-03 08:02:42] 2026-03-03 06:50:12,055 | INFO     | overall cleanup function is called
[2026-03-03 08:02:42] 2026-03-03 06:50:13,062 | INFO     | --- collectZombieJob: --- 10, [1209290]
[2026-03-03 08:02:42] 2026-03-03 06:50:13,063 | INFO     | zombie collector waiting for pid 1209290
[2026-03-03 08:02:42] 2026-03-03 06:50:13,063 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-03 08:02:42] 2026-03-03 06:50:13,063 | INFO     | collected zombie processes
[2026-03-03 08:02:42] 2026-03-03 06:50:13,063 | INFO     | will attempt to kill all subprocesses of pid=1209290
[2026-03-03 08:02:42] 2026-03-03 06:50:13,401 | INFO     | process IDs to be killed: [1209290] (in reverse order)
[2026-03-03 08:02:42] 2026-03-03 06:50:13,513 | WARNING  | found no corresponding commands to process id(s)
[2026-03-03 08:02:42] 2026-03-03 06:50:13,514 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-03 08:02:42] 2026-03-03 06:50:13,524 | INFO     | did not find any defunct processes belonging to 1209290
[2026-03-03 08:02:42] 2026-03-03 06:50:13,534 | INFO     | did not find any defunct processes belonging to 1209290
[2026-03-03 08:02:42] 2026-03-03 06:50:13,534 | INFO     | ready for new job
[2026-03-03 08:02:42] 2026-03-03 06:50:13,534 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-03 08:02:42] 2026-03-03 06:50:13,537 | INFO     | **************************************
[2026-03-03 08:02:42] 2026-03-03 06:50:13,537 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-03 08:02:42] 2026-03-03 06:50:13,537 | INFO     | **************************************
[2026-03-03 08:02:42] 2026-03-03 06:50:13,537 | INFO     | 
[2026-03-03 08:02:42] 2026-03-03 06:50:13,541 | INFO     | architecture information:
[2026-03-03 08:02:42] 2026-03-03 06:50:13,541 | INFO     | executing command: cat /etc/os-release
[2026-03-03 08:02:42] 2026-03-03 06:50:13,557 | INFO     | cat /etc/os-release:
[2026-03-03 08:02:42] NAME="CentOS Linux"
[2026-03-03 08:02:42] VERSION="7 (Core)"
[2026-03-03 08:02:42] ID="centos"
[2026-03-03 08:02:42] ID_LIKE="rhel fedora"
[2026-03-03 08:02:42] VERSION_ID="7"
[2026-03-03 08:02:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-03 08:02:42] ANSI_COLOR="0;31"
[2026-03-03 08:02:42] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-03 08:02:42] HOME_URL="https://www.centos.org/"
[2026-03-03 08:02:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-03 08:02:42] 
[2026-03-03 08:02:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-03 08:02:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-03 08:02:42] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-03 08:02:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-03 08:02:42] 
[2026-03-03 08:02:42] 2026-03-03 06:50:13,557 | INFO     | **************************************
[2026-03-03 08:02:42] 2026-03-03 06:50:14,058 | INFO     | executing command: df -mP /scratch/boinc/var/slot44/slots/0
[2026-03-03 08:02:42] 2026-03-03 06:50:14,075 | INFO     | sufficient remaining disk space (675106783232 B)
[2026-03-03 08:02:42] 2026-03-03 06:50:14,076 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-03 08:02:42] 2026-03-03 06:50:14,076 | INFO     | current server update state: UPDATING_FINAL
[2026-03-03 08:02:42] 2026-03-03 06:50:14,076 | INFO     | update_server=False
[2026-03-03 08:02:42] 2026-03-03 06:50:14,076 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-03 08:02:42] 2026-03-03 06:50:14,077 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-03 08:02:42] 2026-03-03 06:50:14,709 | INFO     | all data control threads have been joined
[2026-03-03 08:02:42] 2026-03-03 06:50:14,811 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-03 08:02:42] 2026-03-03 06:50:14,812 | INFO     | aborting loop
[2026-03-03 08:02:42] 2026-03-03 06:50:15,082 | INFO     | [job] retrieve thread has finished
[2026-03-03 08:02:42] 2026-03-03 06:50:15,269 | INFO     | [payload] validate_pre thread has finished
[2026-03-03 08:02:42] 2026-03-03 06:50:15,458 | INFO     | all payload control threads have been joined
[2026-03-03 08:02:42] 2026-03-03 06:50:15,465 | INFO     | [payload] failed_post thread has finished
[2026-03-03 08:02:42] 2026-03-03 06:50:15,473 | INFO     | [payload] execute_payloads thread has finished
[2026-03-03 08:02:42] 2026-03-03 06:50:15,521 | INFO     | [job] create_data_payload thread has finished
[2026-03-03 08:02:42] 2026-03-03 06:50:15,649 | INFO     | all job control threads have been joined
[2026-03-03 08:02:42] 2026-03-03 06:50:15,715 | INFO     | [data] control thread has finished
[2026-03-03 08:02:42] 2026-03-03 06:50:15,817 | INFO     | [job] job monitor thread has finished
[2026-03-03 08:02:42] 2026-03-03 06:50:15,915 | INFO     | [data] copytool_in thread has finished
[2026-03-03 08:02:42] 2026-03-03 06:50:16,054 | INFO     | [payload] validate_post thread has finished
[2026-03-03 08:02:42] 2026-03-03 06:50:16,082 | INFO     | [data] copytool_out thread has finished
[2026-03-03 08:02:42] 2026-03-03 06:50:16,463 | INFO     | [payload] control thread has finished
[2026-03-03 08:02:42] 2026-03-03 06:50:16,496 | INFO     | [job] validate thread has finished
[2026-03-03 08:02:42] 2026-03-03 06:50:16,653 | INFO     | [job] control thread has finished
[2026-03-03 08:02:42] 2026-03-03 06:50:17,038 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-03 08:02:42] 2026-03-03 06:50:17,371 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-03 08:02:42] 2026-03-03 06:50:18,044 | INFO     | [job] queue monitor thread has finished
[2026-03-03 08:02:42] 2026-03-03 06:50:21,377 | INFO     | [data] queue_monitor thread has finished
[2026-03-03 08:02:42] 2026-03-03 06:50:24,532 | INFO     | job.realtimelogging is not enabled
[2026-03-03 08:02:42] 2026-03-03 06:50:25,537 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-03 08:02:42] 2026-03-03 06:50:43,856 | INFO     | PID=1204477 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-03 08:02:42] 2026-03-03 06:50:43,856 | INFO     | .. there are 11 such processes running
[2026-03-03 08:02:42] 2026-03-03 06:50:43,857 | INFO     | found 0 job(s) in 20 queues
[2026-03-03 08:02:42] 2026-03-03 06:50:43,857 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-03 08:02:42] 2026-03-03 06:50:43,857 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-03 08:02:42] 2026-03-03 06:51:06,269 | INFO     | [monitor] cgroup control has ended
[2026-03-03 08:02:42] 2026-03-03 06:51:07,359 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22690921752384)>', '<ExcThread(monitor, started 22690667935488)>']
[2026-03-03 08:02:42] 2026-03-03 06:51:07,966 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-03 08:02:42] 2026-03-03 06:51:07,966 | INFO     | [monitor] control thread has ended
[2026-03-03 08:02:42] 2026-03-03 06:51:12,379 | INFO     | all workflow threads have been joined
[2026-03-03 08:02:42] 2026-03-03 06:51:12,380 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-03 08:02:42] 2026-03-03 06:51:12,380 | INFO     | traces error code: 0
[2026-03-03 08:02:42] 2026-03-03 06:51:12,380 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-03 08:02:42] 2026-03-03 06:51:12,509 [wrapper] ==== pilot stdout END ====
[2026-03-03 08:02:42] 2026-03-03 06:51:12,512 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-03 08:02:42] 2026-03-03 06:51:12,514 [wrapper] pilotpid: 1204477
[2026-03-03 08:02:42] 2026-03-03 06:51:12,517 [wrapper] Pilot exit status: 0
[2026-03-03 08:02:42] 2026-03-03 06:51:12,527 [wrapper] pandaids: 7035613246
[2026-03-03 08:02:42] 2026-03-03 06:51:12,594 [wrapper] cleanup supervisor_pilot 1466439 1204478
[2026-03-03 08:02:42] 2026-03-03 06:51:12,596 [wrapper] Test setup, not cleaning
[2026-03-03 08:02:42] 2026-03-03 06:51:12,599 [wrapper] apfmon messages muted
[2026-03-03 08:02:42] 2026-03-03 06:51:12,601 [wrapper] ==== wrapper stdout END ====
[2026-03-03 08:02:42] 2026-03-03 06:51:12,603 [wrapper] ==== wrapper stderr END ====
[2026-03-03 08:02:42]  *** Error codes and diagnostics ***
[2026-03-03 08:02:42]     "exeErrorCode": 0,
[2026-03-03 08:02:42]     "exeErrorDiag": "",
[2026-03-03 08:02:42]     "pilotErrorCode": 0,
[2026-03-03 08:02:42]     "pilotErrorDiag": "",
[2026-03-03 08:02:42]  *** Listing of results directory ***
[2026-03-03 08:02:42] total 354640
[2026-03-03 08:02:42] -rw-r--r-- 1 boinc boinc    584627 Mar  1 23:23 pilot3.tar.gz
[2026-03-03 08:02:42] -rw-r--r-- 1 boinc boinc      5111 Mar  1 23:23 queuedata.json
[2026-03-03 08:02:42] -rwx------ 1 boinc boinc     36322 Mar  1 23:24 runpilot2-wrapper.sh
[2026-03-03 08:02:42] -rw-r--r-- 1 boinc boinc       100 Mar  3 04:21 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-03 08:02:42] -rwxr-xr-x 1 boinc boinc      7986 Mar  3 04:21 run_atlas
[2026-03-03 08:02:42] -rw-r--r-- 1 boinc boinc       105 Mar  3 04:21 job.xml
[2026-03-03 08:02:42] -rw-r--r-- 1 boinc boinc      6640 Mar  3 04:21 init_data.xml
[2026-03-03 08:02:42] -rw-r--r-- 2 boinc boinc 207435572 Mar  3 04:21 EVNT.48451897._000001.pool.root.1
[2026-03-03 08:02:42] -rw-r--r-- 2 boinc boinc     15845 Mar  3 04:21 start_atlas.sh
[2026-03-03 08:02:42] drwxrwx--x 2 boinc boinc      4096 Mar  3 04:21 shared
[2026-03-03 08:02:42] -rw-r--r-- 2 boinc boinc    597971 Mar  3 04:21 input.tar.gz
[2026-03-03 08:02:42] -rw-r--r-- 1 boinc boinc         0 Mar  3 04:21 boinc_lockfile
[2026-03-03 08:02:42] -rw-r--r-- 1 boinc boinc      2613 Mar  3 04:21 pandaJob.out
[2026-03-03 08:02:42] -rw------- 1 boinc boinc    997730 Mar  3 04:21 agis_schedconf.cvmfs.json
[2026-03-03 08:02:42] -rw------- 1 boinc boinc       452 Mar  3 04:21 workernode_map.json
[2026-03-03 08:02:42] drwx------ 5 boinc boinc      4096 Mar  3 04:21 pilot3
[2026-03-03 08:02:42] -rw------- 1 boinc boinc 147499367 Mar  3 07:49 HITS.48843834._000076.pool.root.1
[2026-03-03 08:02:42] -rw-r--r-- 1 boinc boinc       529 Mar  3 07:49 boinc_task_state.xml
[2026-03-03 08:02:42] -rw------- 1 boinc boinc      1034 Mar  3 07:50 memory_monitor_summary.json
[2026-03-03 08:02:42] -rw------- 1 boinc boinc   1512931 Mar  3 07:50 agis_ddmendpoints.agis.ALL.json
[2026-03-03 08:02:42] -rw------- 1 boinc boinc    367137 Mar  3 07:50 log.48843834._000076.job.log.tgz.1
[2026-03-03 08:02:42] -rw------- 1 boinc boinc      6395 Mar  3 07:50 heartbeat.json
[2026-03-03 08:02:42] -rw------- 1 boinc boinc        95 Mar  3 07:50 pilot_heartbeat.json
[2026-03-03 08:02:42] -rw------- 1 boinc boinc      4902 Mar  3 07:51 pilotlog.txt
[2026-03-03 08:02:42] -rw------- 1 boinc boinc   1774686 Mar  3 07:51 log.48843834._000076.job.log.1
[2026-03-03 08:02:42] -rw------- 1 boinc boinc       357 Mar  3 07:51 output.list
[2026-03-03 08:02:42] -rw-r--r-- 1 boinc boinc       620 Mar  3 07:51 runtime_log
[2026-03-03 08:02:42] -rw------- 1 boinc boinc   2160640 Mar  3 07:51 result.tar.gz
[2026-03-03 08:02:42] -rw-r--r-- 1 boinc boinc      9205 Mar  3 07:51 runtime_log.err
[2026-03-03 08:02:42] -rw------- 1 boinc boinc       665 Mar  3 07:51 ZpNODmqN4G9n9Rq4apOajLDm4fhM0noT9bVooX4SDmUt9KDmCmGLVo.diag
[2026-03-03 08:02:42] -rw-r--r-- 1 boinc boinc        27 Mar  3 08:02 wrapper_checkpoint.txt
[2026-03-03 08:02:42] -rw-r--r-- 1 boinc boinc      8192 Mar  3 08:02 boinc_mmap_file
[2026-03-03 08:02:42] -rw-r--r-- 1 boinc boinc     21106 Mar  3 08:02 stderr.txt
[2026-03-03 08:02:42] HITS file was successfully produced:
[2026-03-03 08:02:42] -rw------- 1 boinc boinc 147499367 Mar  3 07:49 shared/HITS.pool.root.1
[2026-03-03 08:02:42]  *** Contents of shared directory: ***
[2026-03-03 08:02:42] total 349340
[2026-03-03 08:02:42] -rw-r--r-- 2 boinc boinc 207435572 Mar  3 04:21 ATLAS.root_0
[2026-03-03 08:02:42] -rw-r--r-- 2 boinc boinc     15845 Mar  3 04:21 start_atlas.sh
[2026-03-03 08:02:42] -rw-r--r-- 2 boinc boinc    597971 Mar  3 04:21 input.tar.gz
[2026-03-03 08:02:42] -rw------- 1 boinc boinc 147499367 Mar  3 07:49 HITS.pool.root.1
[2026-03-03 08:02:42] -rw------- 1 boinc boinc   2160640 Mar  3 07:51 result.tar.gz
08:02:44 (1200733): run_atlas exited; CPU time 48932.076291
08:02:44 (1200733): called boinc_finish(0)

</stderr_txt>
]]>

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