Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
2026-03-02 10:41:21 (2708): vboxwrapper version 26210
2026-03-02 10:41:21 (2708): BOINC client version: 8.2.4
2026-03-02 10:41:23 (2708): Detected: VirtualBox VboxManage Interface (Version: 7.1.12)
2026-03-02 10:41:23 (2708): Successfully copied 'init_data.xml' to the shared directory.
2026-03-02 10:41:23 (2708): Create VM. (boinc_c4a2a0e8c2545a73, slot#4)
2026-03-02 10:41:24 (2708): Setting Memory Size for VM. (4300MB)
2026-03-02 10:41:24 (2708): Setting CPU Count for VM. (3)
2026-03-02 10:41:24 (2708): Setting Chipset Options for VM.
2026-03-02 10:41:25 (2708): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-03-02 10:41:25 (2708): Setting Boot Options for VM.
2026-03-02 10:41:25 (2708): Setting Network Configuration for NAT. (Driver: virtio)
2026-03-02 10:41:26 (2708): Enabling VM Network Access.
2026-03-02 10:41:26 (2708): Disabling USB Support for VM.
2026-03-02 10:41:26 (2708): Disabling COM Port Support for VM.
2026-03-02 10:41:27 (2708): Disabling LPT Port Support for VM.
2026-03-02 10:41:27 (2708): Disabling Audio Support for VM.
2026-03-02 10:41:27 (2708): Disabling Clipboard Support for VM.
2026-03-02 10:41:27 (2708): Disabling Drag and Drop Support for VM.
2026-03-02 10:41:28 (2708): Adding storage controller(s) to VM.
2026-03-02 10:41:28 (2708): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-03-02 10:41:30 (2708): Adding VirtualBox Guest Additions to VM.
2026-03-02 10:41:31 (2708): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-03-02 10:41:31 (2708): forwarding host port 55110 to guest port 80
2026-03-02 10:41:31 (2708): Enabling remote desktop for VM.
2026-03-02 10:41:31 (2708): Required extension pack not installed, remote desktop not enabled.
2026-03-02 10:41:31 (2708): Enabling shared directory for VM.
2026-03-02 10:41:32 (2708): Starting VM using VBoxManage interface. (boinc_c4a2a0e8c2545a73, slot#4)
2026-03-02 10:41:36 (2708): Successfully started VM. (PID = '15048')
2026-03-02 10:41:36 (2708): Reporting VM Process ID to BOINC.
2026-03-02 10:41:36 (2708): Guest Log: BIOS: VirtualBox 7.1.12
2026-03-02 10:41:36 (2708): Guest Log: CPUID EDX: 0x178bfbff
2026-03-02 10:41:36 (2708): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-03-02 10:41:37 (2708): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-03-02 10:41:37 (2708): VM state change detected. (old = 'poweredoff', new = 'running')
2026-03-02 10:41:37 (2708): Detected: Web Application Enabled (http://localhost:55110)
2026-03-02 10:41:37 (2708): Preference change detected
2026-03-02 10:41:37 (2708): Setting CPU throttle for VM. (100%)
2026-03-02 10:41:37 (2708): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 180 seconds) or (Vbox_job.xml: 900 seconds))
2026-03-02 10:41:39 (2708): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-03-02 10:41:39 (2708): Guest Log: BIOS: Booting from Hard Disk...
2026-03-02 10:41:42 (2708): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-03-02 10:41:42 (2708): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-03-02 10:41:42 (2708): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-03-02 10:41:42 (2708): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-03-02 10:41:42 (2708): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-03-02 10:41:42 (2708): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-03-02 10:41:42 (2708): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-03-02 10:41:42 (2708): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-03-02 10:41:42 (2708): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-03-02 10:41:42 (2708): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-03-02 10:41:42 (2708): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-03-02 10:41:42 (2708): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-03-02 10:41:42 (2708): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-03-02 10:41:42 (2708): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-03-02 10:41:42 (2708): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-03-02 10:41:42 (2708): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-03-02 10:41:42 (2708): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-03-02 10:41:42 (2708): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-03-02 10:41:42 (2708): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-03-02 10:41:42 (2708): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-03-02 10:41:42 (2708): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-03-02 10:41:42 (2708): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-03-02 10:41:42 (2708): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-03-02 10:41:42 (2708): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-03-02 10:41:42 (2708): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-03-02 10:41:42 (2708): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-03-02 10:41:42 (2708): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-03-02 10:41:42 (2708): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-03-02 10:41:42 (2708): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-03-02 10:41:42 (2708): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-03-02 10:41:42 (2708): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-03-02 10:41:42 (2708): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-03-02 10:41:51 (2708): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-03-02 10:41:51 (2708): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-03-02 10:42:00 (2708): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-03-02 10:42:00 (2708): Guest Log: 00:00:00.000349 main     Log opened 2026-03-02T10:41:57.672483000Z
2026-03-02 10:42:00 (2708): Guest Log: 00:00:00.000441 main     OS Product: Linux
2026-03-02 10:42:00 (2708): Guest Log: 00:00:00.000470 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-03-02 10:42:00 (2708): Guest Log: 00:00:00.000493 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-03-02 10:42:00 (2708): Guest Log: 00:00:00.000515 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-03-02 10:42:00 (2708): Guest Log: 00:00:00.000516 main     Process ID: 1298
2026-03-02 10:42:00 (2708): Guest Log: 00:00:00.000516 main     Package type: LINUX_64BITS_GENERIC
2026-03-02 10:42:00 (2708): Guest Log: 00:00:00.001094 main     5.2.32 r132073 started. Verbose level = 0
2026-03-02 10:42:00 (2708): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-03-02 10:42:00 (2708): Guest Log: [INFO] Mounting shared directory
2026-03-02 10:42:01 (2708): Guest Log: [INFO] Checking for init_data.xml
2026-03-02 10:42:05 (2708): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-03-02 10:42:05 (2708): Guest Log: [INFO] Detected branch: prod
2026-03-02 10:42:05 (2708): Guest Log: This is the prod version of the ATLAS job wrapper
2026-03-02 10:42:05 (2708): Guest Log: Copying input files
2026-03-02 10:42:06 (2708): Guest Log: Copied input files into RunAtlas.
2026-03-02 10:42:06 (2708): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-03-02 10:42:06 (2708): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-03-02 10:42:06 (2708): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-03-02 10:42:06 (2708): Guest Log: Further information can be found at the LHC@home message board.
2026-03-02 10:42:16 (2708): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-03-02 10:42:17 (2708): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-03-02 10:42:17 (2708): Guest Log: 2.6.3.0 1582 0 30192 156803 3 1 3117743 4096001 0 65024 0 0 n/a 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2026-03-02 10:42:19 (2708): Guest Log: copied the webapp to /var/www
2026-03-02 10:42:19 (2708): Guest Log: ATHENA_PROC_NUMBER=3
2026-03-02 10:42:19 (2708): Guest Log: ATHENA_CORE_NUMBER=3
2026-03-02 10:42:20 (2708): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-03-02 10:42:20 (2708): Guest Log:  *** Starting ATLAS job. (PandaID=7035613158 taskID=48843720) ***
2026-03-02 11:41:37 (2708): VM state change detected. (old = 'running', new = 'paused')
2026-03-02 11:44:28 (2708): VM state change detected. (old = 'paused', new = 'running')
2026-03-02 12:24:31 (2708): Status Report: Elapsed Time: '6000.000000'
2026-03-02 12:24:31 (2708): Status Report: CPU Time: '16742.375000'
2026-03-02 12:44:56 (2708): VM state change detected. (old = 'running', new = 'paused')
2026-03-02 13:45:10 (2708): VM state change detected. (old = 'paused', new = 'running')
2026-03-02 13:45:12 (2708): Guest Log: 02:00:07.441690 timesync vgsvcTimeSyncWorker: Radical host time change: 3 617 602 000 000ns (HostNow=1 772 459 074 069 000 000 ns HostLast=1 772 455 456 467 000 000 ns)
2026-03-02 13:45:22 (2708): Guest Log: 02:00:17.451844 timesync vgsvcTimeSyncWorker: Radical guest time change: 3 759 010 419 000ns (GuestNow=1 772 459 084 101 588 000 ns GuestLast=1 772 455 325 091 169 000 ns fSetTimeLastLoop=true )
2026-03-02 14:45:23 (2708): VM state change detected. (old = 'running', new = 'paused')
2026-03-02 14:48:23 (2708): VM state change detected. (old = 'paused', new = 'running')
2026-03-02 15:07:51 (2708): Status Report: Elapsed Time: '12000.000000'
2026-03-02 15:07:51 (2708): Status Report: CPU Time: '34674.671875'
2026-03-02 15:49:09 (2708): VM state change detected. (old = 'running', new = 'paused')
2026-03-02 16:50:08 (2708): VM state change detected. (old = 'paused', new = 'running')
2026-03-02 16:50:12 (2708): Guest Log: 04:01:09.811789 timesync vgsvcTimeSyncWorker: Radical host time change: 3 662 002 000 000ns (HostNow=1 772 470 173 197 000 000 ns HostLast=1 772 466 511 195 000 000 ns)
2026-03-02 16:50:22 (2708): Guest Log: 04:01:19.815467 timesync vgsvcTimeSyncWorker: Radical guest time change: 3 846 739 216 000ns (GuestNow=1 772 470 183 200 714 000 ns GuestLast=1 772 466 336 461 498 000 ns fSetTimeLastLoop=true )
2026-03-02 17:27:54 (2708): Guest Log:  *** Job finished ***
2026-03-02 17:27:54 (2708): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-03-02 17:27:54 (2708): Guest Log: 2026-03-02 17:26:43,693 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-03-02 17:27:54 (2708): Guest Log: 2026-03-02 17:26:43,693 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-03-02 17:27:54 (2708): Guest Log: 2026-03-02 17:27:08,515 | INFO     | [monitor] cgroup control has ended
2026-03-02 17:27:54 (2708): Guest Log: 2026-03-02 17:27:09,826 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140088156313408)>', '<ExcThread(monitor, started 140087555757824)>']
2026-03-02 17:27:54 (2708): Guest Log: 2026-03-02 17:27:09,836 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-03-02 17:27:54 (2708): Guest Log: 2026-03-02 17:27:09,836 | INFO     | [monitor] control thread has ended
2026-03-02 17:27:54 (2708): Guest Log: 2026-03-02 17:27:14,867 | INFO     | all workflow threads have been joined
2026-03-02 17:27:54 (2708): Guest Log: 2026-03-02 17:27:14,867 | INFO     | end of generic workflow (traces error code: 0)
2026-03-02 17:27:54 (2708): Guest Log: 2026-03-02 17:27:14,867 | INFO     | traces error code: 0
2026-03-02 17:27:54 (2708): Guest Log: 2026-03-02 17:27:14,867 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-03-02 17:27:54 (2708): Guest Log: 2026-03-02 17:27:15,283 [wrapper] ==== pilot stdout END ====
2026-03-02 17:27:54 (2708): Guest Log: 2026-03-02 17:27:15,285 [wrapper] ==== wrapper stdout RESUME ====
2026-03-02 17:27:54 (2708): Guest Log: 2026-03-02 17:27:15,288 [wrapper] pilotpid: 5963
2026-03-02 17:27:54 (2708): Guest Log: 2026-03-02 17:27:15,290 [wrapper] Pilot exit status: 0
2026-03-02 17:27:54 (2708): Guest Log: 2026-03-02 17:27:15,364 [wrapper] pandaids: 7035613158
2026-03-02 17:27:54 (2708): Guest Log: 2026-03-02 17:27:15,382 [wrapper] cleanup supervisor_pilot 28912 5964
2026-03-02 17:27:54 (2708): Guest Log: 2026-03-02 17:27:15,384 [wrapper] Test setup, not cleaning
2026-03-02 17:27:54 (2708): Guest Log: 2026-03-02 17:27:15,387 [wrapper] apfmon messages muted
2026-03-02 17:27:54 (2708): Guest Log: 2026-03-02 17:27:15,389 [wrapper] ==== wrapper stdout END ====
2026-03-02 17:27:54 (2708): Guest Log: 2026-03-02 17:27:15,392 [wrapper] ==== wrapper stderr END ====
2026-03-02 17:27:54 (2708): Guest Log:  *** Error codes and diagnostics ***
2026-03-02 17:27:54 (2708): Guest Log:     "exeErrorCode": 0,
2026-03-02 17:27:54 (2708): Guest Log:     "exeErrorDiag": "",
2026-03-02 17:27:54 (2708): Guest Log:     "pilotErrorCode": 0,
2026-03-02 17:27:54 (2708): Guest Log:     "pilotErrorDiag": "",
2026-03-02 17:27:54 (2708): Guest Log:  *** Listing of results directory ***
2026-03-02 17:27:54 (2708): Guest Log: total 223408
2026-03-02 17:27:54 (2708): Guest Log: -rw-r--r--. 1 atlas atlas    584627 Mar  1 22:23 pilot3.tar.gz
2026-03-02 17:27:54 (2708): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Mar  1 22:23 queuedata.json
2026-03-02 17:27:54 (2708): Guest Log: -rwx------. 1 atlas atlas     36322 Mar  1 22:24 runpilot2-wrapper.sh
2026-03-02 17:27:54 (2708): Guest Log: -rwxr-xr-x. 1 atlas atlas      8736 Mar  2 10:42 init_data.xml
2026-03-02 17:27:54 (2708): Guest Log: -rwxr-xr-x. 1 atlas atlas    597981 Mar  2 10:42 input.tar.gz
2026-03-02 17:27:54 (2708): Guest Log: -rwxr-xr-x. 1 atlas atlas     15845 Mar  2 10:42 start_atlas.sh
2026-03-02 17:27:54 (2708): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Mar  2 10:42 EVNT.48451626._000001.pool.root.1 -> /data/./ATLAS.root_0
2026-03-02 17:27:54 (2708): Guest Log: -rw-r--r--. 1 atlas atlas      2622 Mar  2 10:42 pandaJob.out
2026-03-02 17:27:54 (2708): Guest Log: -rw-------. 1 atlas atlas    998143 Mar  2 10:43 agis_schedconf.cvmfs.json
2026-03-02 17:27:54 (2708): Guest Log: -rw-------. 1 atlas atlas       401 Mar  2 10:43 workernode_map.json
2026-03-02 17:27:54 (2708): Guest Log: drwx------. 5 atlas atlas      4096 Mar  2 10:43 pilot3
2026-03-02 17:27:54 (2708): Guest Log: -rw-------. 1 atlas atlas 219403508 Mar  2 17:25 HITS.48843720._000076.pool.root.1
2026-03-02 17:27:54 (2708): Guest Log: -rw-------. 1 atlas atlas        97 Mar  2 17:25 pilot_heartbeat.json
2026-03-02 17:27:54 (2708): Guest Log: -rw-------. 1 atlas atlas         0 Mar  2 17:26 memory_monitor_summary.json
2026-03-02 17:27:54 (2708): Guest Log: -rw-------. 1 atlas atlas   1512931 Mar  2 17:26 agis_ddmendpoints.agis.ALL.json
2026-03-02 17:27:54 (2708): Guest Log: -rw-------. 1 atlas atlas    428127 Mar  2 17:26 log.48843720._000076.job.log.tgz.1
2026-03-02 17:27:54 (2708): Guest Log: -rw-------. 1 atlas atlas      6269 Mar  2 17:26 heartbeat.json
2026-03-02 17:27:54 (2708): Guest Log: -rw-------. 1 atlas atlas      4873 Mar  2 17:27 pilotlog.txt
2026-03-02 17:27:54 (2708): Guest Log: -rw-------. 1 atlas atlas   2326445 Mar  2 17:27 log.48843720._000076.job.log.1
2026-03-02 17:27:54 (2708): Guest Log: -rw-------. 1 atlas atlas       357 Mar  2 17:27 output.list
2026-03-02 17:27:54 (2708): Guest Log: -rw-r--r--. 1 atlas atlas       620 Mar  2 17:27 runtime_log
2026-03-02 17:27:54 (2708): Guest Log: -rw-------. 1 atlas atlas   2775040 Mar  2 17:27 result.tar.gz
2026-03-02 17:27:54 (2708): Guest Log: -rw-------. 1 atlas atlas       670 Mar  2 17:27 y7wNDmqN4G9n9Rq4apOajLDm4fhM0noT9bVooX4SDmIt9KDmgWliMn.diag
2026-03-02 17:27:54 (2708): Guest Log: -rw-r--r--. 1 atlas atlas      8781 Mar  2 17:27 runtime_log.err
2026-03-02 17:27:54 (2708): Guest Log: Looking for outputfile HITS.48843720._000076.pool.root.1
2026-03-02 17:27:54 (2708): Guest Log: HITS file was successfully produced
2026-03-02 17:27:54 (2708): Guest Log: -rw-------. 1 atlas atlas 219403508 Mar  2 17:25 /home/atlas/RunAtlas/HITS.48843720._000076.pool.root.1
2026-03-02 17:27:55 (2708): Guest Log: Successfully finished the ATLAS job!
2026-03-02 17:27:55 (2708): Guest Log: Copying the results back to the shared directory!
2026-03-02 17:27:55 (2708): Guest Log:  *** Contents of shared directory: ***
2026-03-02 17:27:55 (2708): Guest Log: total 461120
2026-03-02 17:27:55 (2708): Guest Log: -rwxrwxrwx. 1 root root 249373254 Mar  2 10:41 ATLAS.root_0
2026-03-02 17:27:55 (2708): Guest Log: -rwxrwxrwx. 1 root root 219403508 Mar  2  2026 HITS.pool.root.1
2026-03-02 17:27:55 (2708): Guest Log: -rwxrwxrwx. 1 root root      8736 Mar  2 10:41 init_data.xml
2026-03-02 17:27:55 (2708): Guest Log: -rwxrwxrwx. 1 root root    597981 Mar  2 01:52 input.tar.gz
2026-03-02 17:27:55 (2708): Guest Log: -rwxrwxrwx. 1 root root   2775040 Mar  2  2026 result.tar.gz
2026-03-02 17:27:55 (2708): Guest Log: -rwxrwxrwx. 1 root root     15845 Mar  2 01:52 start_atlas.sh
2026-03-02 17:27:55 (2708): Guest Log:  *** Success! Shutting down the machine. ***
2026-03-02 17:27:55 (2708): VM Completion File Detected.
2026-03-02 17:27:55 (2708): Powering off VM.
2026-03-02 17:27:56 (2708): Successfully stopped VM.
2026-03-02 17:27:56 (2708): Deregistering VM. (boinc_c4a2a0e8c2545a73, slot#4)
2026-03-02 17:27:56 (2708): Removing network bandwidth throttle group from VM.
2026-03-02 17:27:56 (2708): Removing VM from VirtualBox.
2026-03-02 17:28:01 (2708): called boinc_finish(0)

</stderr_txt>
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