Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
19:59:48 (3879244): wrapper (7.7.26015): starting
19:59:48 (3879244): wrapper: running run_atlas (--nthreads 4)
[2026-03-02 19:59:48] Arguments: --nthreads 4
[2026-03-02 19:59:48] Threads: 4
[2026-03-02 19:59:48] Checking for CVMFS
[2026-03-02 19:59:48] No cvmfs_config command found, will try listing directly
[2026-03-02 19:59:48] CVMFS is ok
[2026-03-02 19:59:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-02 19:59:48] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-02 19:59:48] Further information can be found at the LHC@home message board.
[2026-03-02 19:59:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-02 19:59:48] Checking for apptainer binary...
[2026-03-02 19:59:48] which: no apptainer in ((null))
[2026-03-02 19:59:48] apptainer is not installed, using version from CVMFS
[2026-03-02 19:59:48] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-02 19:59:48] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot184/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut19.grid.cesnet.cz
[2026-03-02 19:59:48] apptainer works
[2026-03-02 19:59:48] Set ATHENA_PROC_NUMBER=4
[2026-03-02 19:59:48] Set ATHENA_CORE_NUMBER=4
[2026-03-02 19:59:48] Starting ATLAS job with PandaID=7035659538
[2026-03-02 19:59:48] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot184/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-02 21:40:16]  *** The last 200 lines of the pilot log: ***
[2026-03-02 21:40:16]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-03-02 21:40:16]  is_altstaged=None
[2026-03-02 21:40:16]  is_tar=False
[2026-03-02 21:40:16]  lfn=log.48838432._005514.job.log.tgz.1
[2026-03-02 21:40:16]  mtime=0
[2026-03-02 21:40:16]  protocol_id=None
[2026-03-02 21:40:16]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-02 21:40:16]  replicas=None
[2026-03-02 21:40:16]  scope=mc23_13p6TeV
[2026-03-02 21:40:16]  status=None
[2026-03-02 21:40:16]  status_code=0
[2026-03-02 21:40:16]  storage_token=
[2026-03-02 21:40:16]  surl=/var/lib/boinc/var/slot184/slots/0/PanDA_Pilot-7035659538/log.48838432._005514.job.log.tgz.1
[2026-03-02 21:40:16]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/6f/5f/log.48838432._005514.job.log.tgz.1
[2026-03-02 21:40:16]  workdir=None
[2026-03-02 21:40:16] ]
[2026-03-02 21:40:16] 2026-03-02 20:39:25,233 | INFO     | transferring file log.48838432._005514.job.log.tgz.1 from /var/lib/boinc/var/slot184/slots/0/PanDA_Pilot-7035659538/log.48838432._005514.job.log.tgz.1 to /var/lib/
[2026-03-02 21:40:16] 2026-03-02 20:39:25,234 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot184/slots/0/PanDA_Pilot-7035659538/log.48838432._005514.job.log.tgz.1 /var/lib/boinc/var/slot184/slots/0/
[2026-03-02 21:40:16] 2026-03-02 20:39:25,251 | INFO     | adding to output.list: log.48838432._005514.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/6f/5f/log.48838432._005514.job.log.tg
[2026-03-02 21:40:16] 2026-03-02 20:39:25,252 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-02 21:40:16] 2026-03-02 20:39:25,252 | INFO     | summary of transferred files:
[2026-03-02 21:40:16] 2026-03-02 20:39:25,252 | INFO     |  -- lfn=log.48838432._005514.job.log.tgz.1, status_code=0, status=transferred
[2026-03-02 21:40:16] 2026-03-02 20:39:25,252 | INFO     | stage-out finished correctly
[2026-03-02 21:40:16] 2026-03-02 20:39:25,316 | INFO     | number of running child processes to parent process 3894955: 1
[2026-03-02 21:40:16] 2026-03-02 20:39:25,317 | INFO     | maximum number of monitored processes: 6
[2026-03-02 21:40:16] 2026-03-02 20:39:26,279 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-02 21:40:16] 2026-03-02 20:39:26,575 | INFO     | time since job start (5966s) is within the limit (349056.0s)
[2026-03-02 21:40:16] 2026-03-02 20:39:27,822 | INFO     | monitor loop #432: job 0:7035659538 is in state 'finished'
[2026-03-02 21:40:16] 2026-03-02 20:39:27,822 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-02 21:40:16] 2026-03-02 20:39:28,325 | INFO     | job 7035659538 has state=finished
[2026-03-02 21:40:16] 2026-03-02 20:39:28,325 | INFO     | preparing for final server update for job 7035659538 in state='finished'
[2026-03-02 21:40:16] 2026-03-02 20:39:28,326 | INFO     | reading metadata from: /var/lib/boinc/var/slot184/slots/0/PanDA_Pilot-7035659538/jobReport.json
[2026-03-02 21:40:16] 2026-03-02 20:39:28,327 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot184/slots/0/workernode_map.json
[2026-03-02 21:40:16] 2026-03-02 20:39:28,327 | INFO     | this job has now completed (state=finished)
[2026-03-02 21:40:16] 2026-03-02 20:39:28,328 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-02 21:40:16] 2026-03-02 20:39:28,328 | INFO     | log transfer has been attempted: DONE
[2026-03-02 21:40:16] 2026-03-02 20:39:28,328 | INFO     | job 7035659538 has finished - writing final server update
[2026-03-02 21:40:16] 2026-03-02 20:39:28,328 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_202908/.job.ad'
[2026-03-02 21:40:16] 2026-03-02 20:39:28,328 | INFO     | total number of processed events: 400 (read)
[2026-03-02 21:40:16] 2026-03-02 20:39:28,346 | INFO     | using path: /var/lib/boinc/var/slot184/slots/0/PanDA_Pilot-7035659538/memory_monitor_summary.json (trf name=prmon)
[2026-03-02 21:40:16] 2026-03-02 20:39:28,346 | INFO     | extracted standard info from prmon json
[2026-03-02 21:40:16] 2026-03-02 20:39:28,346 | INFO     | extracted standard memory fields from prmon json
[2026-03-02 21:40:16] 2026-03-02 20:39:28,346 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-02 21:40:16] 2026-03-02 20:39:28,346 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-02 21:40:16] 2026-03-02 20:39:28,346 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-02 21:40:16] 2026-03-02 20:39:28,348 | INFO     | fitting pss+swap vs Time
[2026-03-02 21:40:16] 2026-03-02 20:39:28,348 | INFO     | sum of square deviations: 233641590.0
[2026-03-02 21:40:16] 2026-03-02 20:39:28,348 | INFO     | sum of deviations: 1043343573.0000002
[2026-03-02 21:40:16] 2026-03-02 20:39:28,348 | INFO     | mean x: 1772481071.0
[2026-03-02 21:40:16] 2026-03-02 20:39:28,348 | INFO     | mean y: 2350792.7802197803
[2026-03-02 21:40:16] 2026-03-02 20:39:28,348 | INFO     | intersect: -7912792798.273098
[2026-03-02 21:40:16] 2026-03-02 20:39:28,348 | INFO     | chi2: 0.0003310253771800692
[2026-03-02 21:40:16] 2026-03-02 20:39:28,348 | INFO     | current memory leak: 4.47 B/s (using 91 data points, chi2=0.00)
[2026-03-02 21:40:16] 2026-03-02 20:39:28,349 | INFO     | could have reported an average CPU frequency of 3556 MHz (7 samples)
[2026-03-02 21:40:16] 2026-03-02 20:39:28,349 | INFO     | ..............................
[2026-03-02 21:40:16] 2026-03-02 20:39:28,349 | INFO     | . Timing measurements:
[2026-03-02 21:40:16] 2026-03-02 20:39:28,349 | INFO     | . get job = 0 s
[2026-03-02 21:40:16] 2026-03-02 20:39:28,349 | INFO     | . initial setup = 4 s
[2026-03-02 21:40:16] 2026-03-02 20:39:28,349 | INFO     | . payload setup = 5 s
[2026-03-02 21:40:16] 2026-03-02 20:39:28,349 | INFO     | . stage-in = 0 s
[2026-03-02 21:40:16] 2026-03-02 20:39:28,349 | INFO     | . payload execution = 5943 s
[2026-03-02 21:40:16] 2026-03-02 20:39:28,349 | INFO     | . stage-out = 0 s
[2026-03-02 21:40:16] 2026-03-02 20:39:28,349 | INFO     | . log creation = 0 s
[2026-03-02 21:40:16] 2026-03-02 20:39:28,349 | INFO     | ..............................
[2026-03-02 21:40:16] 2026-03-02 20:39:28,580 | INFO     | time since job start (5968s) is within the limit (349056.0s)
[2026-03-02 21:40:16] 2026-03-02 20:39:28,660 | INFO     | 
[2026-03-02 21:40:16] 2026-03-02 20:39:28,660 | INFO     | job summary report
[2026-03-02 21:40:16] 2026-03-02 20:39:28,660 | INFO     | --------------------------------------------------
[2026-03-02 21:40:16] 2026-03-02 20:39:28,660 | INFO     | PanDA job id: 7035659538
[2026-03-02 21:40:16] 2026-03-02 20:39:28,660 | INFO     | task id: 48838432
[2026-03-02 21:40:16] 2026-03-02 20:39:28,660 | INFO     | errors: (none)
[2026-03-02 21:40:16] 2026-03-02 20:39:28,660 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-02 21:40:16] 2026-03-02 20:39:28,660 | INFO     | pilot state: finished 
[2026-03-02 21:40:16] 2026-03-02 20:39:28,660 | INFO     | transexitcode: 0
[2026-03-02 21:40:16] 2026-03-02 20:39:28,660 | INFO     | exeerrorcode: 0
[2026-03-02 21:40:16] 2026-03-02 20:39:28,660 | INFO     | exeerrordiag: 
[2026-03-02 21:40:16] 2026-03-02 20:39:28,660 | INFO     | exitcode: 0
[2026-03-02 21:40:16] 2026-03-02 20:39:28,660 | INFO     | exitmsg: OK
[2026-03-02 21:40:16] 2026-03-02 20:39:28,660 | INFO     | cpuconsumptiontime: 22955 s
[2026-03-02 21:40:16] 2026-03-02 20:39:28,660 | INFO     | nevents: 400
[2026-03-02 21:40:16] 2026-03-02 20:39:28,660 | INFO     | neventsw: 0
[2026-03-02 21:40:16] 2026-03-02 20:39:28,660 | INFO     | pid: 3894955
[2026-03-02 21:40:16] 2026-03-02 20:39:28,660 | INFO     | pgrp: 3894955
[2026-03-02 21:40:16] 2026-03-02 20:39:28,660 | INFO     | corecount: 4
[2026-03-02 21:40:16] 2026-03-02 20:39:28,660 | INFO     | event service: False
[2026-03-02 21:40:16] 2026-03-02 20:39:28,661 | INFO     | sizes: {0: 2281815, 1: 2282332, 11: 2282332, 5952: 2309114, 5954: 2318136, 5955: 2318192, 5957: 2318514}
[2026-03-02 21:40:16] 2026-03-02 20:39:28,661 | INFO     | --------------------------------------------------
[2026-03-02 21:40:16] 2026-03-02 20:39:28,661 | INFO     | 
[2026-03-02 21:40:16] 2026-03-02 20:39:28,661 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot184/slots/0
[2026-03-02 21:40:16] 2026-03-02 20:39:28,680 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-02 21:40:16] 2026-03-02 20:39:28,680 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-02 21:40:16] 2026-03-02 20:39:28,680 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-02 21:40:16] 2026-03-02 20:39:28,680 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-02 21:40:16] 2026-03-02 20:39:28,680 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-02 21:40:16] 2026-03-02 20:39:28,680 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-02 21:40:16] 2026-03-02 20:39:28,681 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-02 21:40:16] 2026-03-02 20:39:28,681 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-02 21:40:16] 2026-03-02 20:39:28,681 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-02 21:40:16] 2026-03-02 20:39:28,681 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-02 21:40:16] 2026-03-02 20:39:28,681 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-02 21:40:16] 2026-03-02 20:39:28,681 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-02 21:40:16] 2026-03-02 20:39:28,681 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-02 21:40:16] 2026-03-02 20:39:28,681 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-02 21:40:16] 2026-03-02 20:39:28,681 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-02 21:40:16] 2026-03-02 20:39:28,681 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-02 21:40:16] 2026-03-02 20:39:28,681 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-02 21:40:16] 2026-03-02 20:39:28,681 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-02 21:40:16] 2026-03-02 20:39:28,681 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-02 21:40:16] 2026-03-02 20:39:28,681 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-02 21:40:16] 2026-03-02 20:39:28,681 | INFO     | job 7035659538 has completed (purged errors)
[2026-03-02 21:40:16] 2026-03-02 20:39:28,681 | INFO     | overall cleanup function is called
[2026-03-02 21:40:16] 2026-03-02 20:39:29,688 | INFO     | --- collectZombieJob: --- 10, [3894955]
[2026-03-02 21:40:16] 2026-03-02 20:39:29,688 | INFO     | zombie collector waiting for pid 3894955
[2026-03-02 21:40:16] 2026-03-02 20:39:29,688 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-02 21:40:16] 2026-03-02 20:39:29,688 | INFO     | collected zombie processes
[2026-03-02 21:40:16] 2026-03-02 20:39:29,688 | INFO     | will attempt to kill all subprocesses of pid=3894955
[2026-03-02 21:40:16] 2026-03-02 20:39:30,144 | INFO     | process IDs to be killed: [3894955] (in reverse order)
[2026-03-02 21:40:16] 2026-03-02 20:39:30,360 | WARNING  | found no corresponding commands to process id(s)
[2026-03-02 21:40:16] 2026-03-02 20:39:30,361 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-02 21:40:16] 2026-03-02 20:39:30,390 | INFO     | did not find any defunct processes belonging to 3894955
[2026-03-02 21:40:16] 2026-03-02 20:39:30,419 | INFO     | did not find any defunct processes belonging to 3894955
[2026-03-02 21:40:16] 2026-03-02 20:39:30,419 | INFO     | ready for new job
[2026-03-02 21:40:16] 2026-03-02 20:39:30,419 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-02 21:40:16] 2026-03-02 20:39:30,420 | INFO     | **************************************
[2026-03-02 21:40:16] 2026-03-02 20:39:30,421 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-02 21:40:16] 2026-03-02 20:39:30,421 | INFO     | **************************************
[2026-03-02 21:40:16] 2026-03-02 20:39:30,421 | INFO     | 
[2026-03-02 21:40:16] 2026-03-02 20:39:30,427 | INFO     | architecture information:
[2026-03-02 21:40:16] 2026-03-02 20:39:30,427 | INFO     | executing command: cat /etc/os-release
[2026-03-02 21:40:16] 2026-03-02 20:39:30,443 | INFO     | cat /etc/os-release:
[2026-03-02 21:40:16] NAME="CentOS Linux"
[2026-03-02 21:40:16] VERSION="7 (Core)"
[2026-03-02 21:40:16] ID="centos"
[2026-03-02 21:40:16] ID_LIKE="rhel fedora"
[2026-03-02 21:40:16] VERSION_ID="7"
[2026-03-02 21:40:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-02 21:40:16] ANSI_COLOR="0;31"
[2026-03-02 21:40:16] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-02 21:40:16] HOME_URL="https://www.centos.org/"
[2026-03-02 21:40:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-02 21:40:16] 
[2026-03-02 21:40:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-02 21:40:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-02 21:40:16] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-02 21:40:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-02 21:40:16] 
[2026-03-02 21:40:16] 2026-03-02 20:39:30,443 | INFO     | **************************************
[2026-03-02 21:40:16] 2026-03-02 20:39:30,946 | INFO     | executing command: df -mP /var/lib/boinc/var/slot184/slots/0
[2026-03-02 21:40:16] 2026-03-02 20:39:30,959 | INFO     | sufficient remaining disk space (22054699008 B)
[2026-03-02 21:40:16] 2026-03-02 20:39:30,959 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-02 21:40:16] 2026-03-02 20:39:30,960 | INFO     | current server update state: UPDATING_FINAL
[2026-03-02 21:40:16] 2026-03-02 20:39:30,960 | INFO     | update_server=False
[2026-03-02 21:40:16] 2026-03-02 20:39:30,960 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-02 21:40:16] 2026-03-02 20:39:30,960 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-02 21:40:16] 2026-03-02 20:39:31,330 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-02 21:40:16] 2026-03-02 20:39:31,330 | INFO     | aborting loop
[2026-03-02 21:40:16] 2026-03-02 20:39:31,396 | INFO     | all data control threads have been joined
[2026-03-02 21:40:16] 2026-03-02 20:39:31,965 | INFO     | [job] retrieve thread has finished
[2026-03-02 21:40:16] 2026-03-02 20:39:31,995 | INFO     | all job control threads have been joined
[2026-03-02 21:40:16] 2026-03-02 20:39:32,088 | INFO     | all payload control threads have been joined
[2026-03-02 21:40:16] 2026-03-02 20:39:32,098 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-02 21:40:16] 2026-03-02 20:39:32,250 | INFO     | [payload] execute_payloads thread has finished
[2026-03-02 21:40:16] 2026-03-02 20:39:32,335 | INFO     | [job] job monitor thread has finished
[2026-03-02 21:40:16] 2026-03-02 20:39:32,338 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-02 21:40:16] 2026-03-02 20:39:32,400 | INFO     | [data] control thread has finished
[2026-03-02 21:40:16] 2026-03-02 20:39:32,675 | INFO     | [job] validate thread has finished
[2026-03-02 21:40:16] 2026-03-02 20:39:32,770 | INFO     | [payload] validate_pre thread has finished
[2026-03-02 21:40:16] 2026-03-02 20:39:32,805 | INFO     | [payload] validate_post thread has finished
[2026-03-02 21:40:16] 2026-03-02 20:39:32,964 | INFO     | [data] copytool_out thread has finished
[2026-03-02 21:40:16] 2026-03-02 20:39:33,001 | INFO     | [job] control thread has finished
[2026-03-02 21:40:16] 2026-03-02 20:39:33,010 | INFO     | [job] create_data_payload thread has finished
[2026-03-02 21:40:16] 2026-03-02 20:39:33,033 | INFO     | [data] copytool_in thread has finished
[2026-03-02 21:40:16] 2026-03-02 20:39:33,089 | INFO     | [payload] failed_post thread has finished
[2026-03-02 21:40:16] 2026-03-02 20:39:33,093 | INFO     | [payload] control thread has finished
[2026-03-02 21:40:16] 2026-03-02 20:39:33,408 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-02 21:40:16] 2026-03-02 20:39:34,413 | INFO     | [job] queue monitor thread has finished
[2026-03-02 21:40:16] 2026-03-02 20:39:36,345 | INFO     | [data] queue_monitor thread has finished
[2026-03-02 21:40:16] 2026-03-02 20:40:02,142 | INFO     | PID=3883778 has CPU usage=8.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-02 21:40:16] 2026-03-02 20:40:02,142 | INFO     | .. there are 46 such processes running
[2026-03-02 21:40:16] 2026-03-02 20:40:02,142 | INFO     | found 0 job(s) in 20 queues
[2026-03-02 21:40:16] 2026-03-02 20:40:02,142 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-02 21:40:16] 2026-03-02 20:40:02,142 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-02 21:40:16] 2026-03-02 20:40:09,752 | INFO     | [monitor] cgroup control has ended
[2026-03-02 21:40:16] 2026-03-02 20:40:11,429 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22407094445888)>', '<ExcThread(monitor, started 22406847788800)>']
[2026-03-02 21:40:16] 2026-03-02 20:40:12,191 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-02 21:40:16] 2026-03-02 20:40:12,191 | INFO     | [monitor] control thread has ended
[2026-03-02 21:40:16] 2026-03-02 20:40:16,454 | INFO     | all workflow threads have been joined
[2026-03-02 21:40:16] 2026-03-02 20:40:16,454 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-02 21:40:16] 2026-03-02 20:40:16,455 | INFO     | traces error code: 0
[2026-03-02 21:40:16] 2026-03-02 20:40:16,455 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-02 21:40:16] 2026-03-02 20:40:16,595 [wrapper] ==== pilot stdout END ====
[2026-03-02 21:40:16] 2026-03-02 20:40:16,598 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-02 21:40:16] 2026-03-02 20:40:16,600 [wrapper] pilotpid: 3883778
[2026-03-02 21:40:16] 2026-03-02 20:40:16,602 [wrapper] Pilot exit status: 0
[2026-03-02 21:40:16] 2026-03-02 20:40:16,610 [wrapper] pandaids: 7035659538
[2026-03-02 21:40:16] 2026-03-02 20:40:16,731 [wrapper] cleanup supervisor_pilot  427447 3883779
[2026-03-02 21:40:16] 2026-03-02 20:40:16,734 [wrapper] Test setup, not cleaning
[2026-03-02 21:40:16] 2026-03-02 20:40:16,739 [wrapper] apfmon messages muted
[2026-03-02 21:40:16] 2026-03-02 20:40:16,742 [wrapper] ==== wrapper stdout END ====
[2026-03-02 21:40:16] 2026-03-02 20:40:16,747 [wrapper] ==== wrapper stderr END ====
[2026-03-02 21:40:16]  *** Error codes and diagnostics ***
[2026-03-02 21:40:16]     "exeErrorCode": 0,
[2026-03-02 21:40:16]     "exeErrorDiag": "",
[2026-03-02 21:40:16]     "pilotErrorCode": 0,
[2026-03-02 21:40:16]     "pilotErrorDiag": "",
[2026-03-02 21:40:16]  *** Listing of results directory ***
[2026-03-02 21:40:16] total 504004
[2026-03-02 21:40:16] -rw-r--r--. 1 boinc boinc    584627 Mar  1 23:23 pilot3.tar.gz
[2026-03-02 21:40:16] -rw-r--r--. 1 boinc boinc      5111 Mar  1 23:23 queuedata.json
[2026-03-02 21:40:16] -rwx------. 1 boinc boinc     36322 Mar  1 23:23 runpilot2-wrapper.sh
[2026-03-02 21:40:16] -rw-r--r--. 1 boinc boinc       100 Mar  2 19:59 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-02 21:40:16] -rwxr-xr-x. 1 boinc boinc      7986 Mar  2 19:59 run_atlas
[2026-03-02 21:40:16] -rw-r--r--. 1 boinc boinc       105 Mar  2 19:59 job.xml
[2026-03-02 21:40:16] drwxrwx--x. 2 boinc boinc      4096 Mar  2 19:59 shared
[2026-03-02 21:40:16] -rw-r--r--. 2 boinc boinc    597968 Mar  2 19:59 input.tar.gz
[2026-03-02 21:40:16] -rw-r--r--. 1 boinc boinc      6706 Mar  2 19:59 init_data.xml
[2026-03-02 21:40:16] -rw-r--r--. 2 boinc boinc 287596600 Mar  2 19:59 EVNT.48220101._000208.pool.root.1
[2026-03-02 21:40:16] -rw-r--r--. 2 boinc boinc     15845 Mar  2 19:59 start_atlas.sh
[2026-03-02 21:40:16] -rw-r--r--. 1 boinc boinc         0 Mar  2 19:59 boinc_lockfile
[2026-03-02 21:40:16] -rw-r--r--. 1 boinc boinc      2580 Mar  2 19:59 pandaJob.out
[2026-03-02 21:40:16] -rw-------. 1 boinc boinc    998478 Mar  2 19:59 agis_schedconf.cvmfs.json
[2026-03-02 21:40:16] -rw-------. 1 boinc boinc   1512931 Mar  2 19:59 agis_ddmendpoints.agis.ALL.json
[2026-03-02 21:40:16] -rw-------. 1 boinc boinc       445 Mar  2 19:59 workernode_map.json
[2026-03-02 21:40:16] drwx------. 5 boinc boinc      4096 Mar  2 20:00 pilot3
[2026-03-02 21:40:16] -rw-------. 1 boinc boinc 222276030 Mar  2 21:38 HITS.48838432._005514.pool.root.1
[2026-03-02 21:40:16] -rw-r--r--. 1 boinc boinc       529 Mar  2 21:38 boinc_task_state.xml
[2026-03-02 21:40:16] -rw-------. 1 boinc boinc        95 Mar  2 21:39 pilot_heartbeat.json
[2026-03-02 21:40:16] -rw-------. 1 boinc boinc      1032 Mar  2 21:39 memory_monitor_summary.json
[2026-03-02 21:40:16] -rw-------. 1 boinc boinc    279903 Mar  2 21:39 log.48838432._005514.job.log.tgz.1
[2026-03-02 21:40:16] -rw-------. 1 boinc boinc      6351 Mar  2 21:39 heartbeat.json
[2026-03-02 21:40:16] -rw-r--r--. 1 boinc boinc      8192 Mar  2 21:39 boinc_mmap_file
[2026-03-02 21:40:16] -rw-r--r--. 1 boinc boinc        27 Mar  2 21:40 wrapper_checkpoint.txt
[2026-03-02 21:40:16] -rw-------. 1 boinc boinc      4830 Mar  2 21:40 pilotlog.txt
[2026-03-02 21:40:16] -rw-------. 1 boinc boinc    864780 Mar  2 21:40 log.48838432._005514.job.log.1
[2026-03-02 21:40:16] -rw-------. 1 boinc boinc       357 Mar  2 21:40 output.list
[2026-03-02 21:40:16] -rw-r--r--. 1 boinc boinc       620 Mar  2 21:40 runtime_log
[2026-03-02 21:40:16] -rw-------. 1 boinc boinc   1167360 Mar  2 21:40 result.tar.gz
[2026-03-02 21:40:16] -rw-r--r--. 1 boinc boinc      9221 Mar  2 21:40 runtime_log.err
[2026-03-02 21:40:16] -rw-------. 1 boinc boinc       662 Mar  2 21:40 In6LDmhN4G9n9Rq4apOajLDm4fhM0noT9bVooX4SDm7r9KDm1WIIEn.diag
[2026-03-02 21:40:16] -rw-r--r--. 1 boinc boinc     21314 Mar  2 21:40 stderr.txt
[2026-03-02 21:40:16] HITS file was successfully produced:
[2026-03-02 21:40:16] -rw-------. 1 boinc boinc 222276030 Mar  2 21:38 shared/HITS.pool.root.1
[2026-03-02 21:40:16]  *** Contents of shared directory: ***
[2026-03-02 21:40:16] total 499676
[2026-03-02 21:40:16] -rw-r--r--. 2 boinc boinc    597968 Mar  2 19:59 input.tar.gz
[2026-03-02 21:40:16] -rw-r--r--. 2 boinc boinc 287596600 Mar  2 19:59 ATLAS.root_0
[2026-03-02 21:40:16] -rw-r--r--. 2 boinc boinc     15845 Mar  2 19:59 start_atlas.sh
[2026-03-02 21:40:16] -rw-------. 1 boinc boinc 222276030 Mar  2 21:38 HITS.pool.root.1
[2026-03-02 21:40:16] -rw-------. 1 boinc boinc   1167360 Mar  2 21:40 result.tar.gz
21:40:18 (3879244): run_atlas exited; CPU time 23231.049049
21:40:18 (3879244): called boinc_finish(0)

</stderr_txt>
]]>

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