Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
01:17:07 (889951): wrapper (7.7.26015): starting
01:17:07 (889951): wrapper: running run_atlas (--nthreads 4)
[2026-03-03 01:17:07] Arguments: --nthreads 4
[2026-03-03 01:17:07] Threads: 4
[2026-03-03 01:17:07] Checking for CVMFS
[2026-03-03 01:17:07] No cvmfs_config command found, will try listing directly
[2026-03-03 01:17:07] CVMFS is ok
[2026-03-03 01:17:07] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-03 01:17:07] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-03 01:17:07] Further information can be found at the LHC@home message board.
[2026-03-03 01:17:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-03 01:17:07] Checking for apptainer binary...
[2026-03-03 01:17:07] which: no apptainer in ((null))
[2026-03-03 01:17:07] apptainer is not installed, using version from CVMFS
[2026-03-03 01:17:07] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-03 01:17:08] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot44/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut04.grid.cesnet.cz
[2026-03-03 01:17:08] apptainer works
[2026-03-03 01:17:08] Set ATHENA_PROC_NUMBER=4
[2026-03-03 01:17:08] Set ATHENA_CORE_NUMBER=4
[2026-03-03 01:17:08] Starting ATLAS job with PandaID=7035730586
[2026-03-03 01:17:08] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot44/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-03 05:36:55]  *** The last 200 lines of the pilot log: ***
[2026-03-03 05:36:55] 2026-03-03 04:35:58,706 | INFO     | job 7035730586 has state=finished
[2026-03-03 05:36:55] 2026-03-03 04:35:58,707 | INFO     | preparing for final server update for job 7035730586 in state='finished'
[2026-03-03 05:36:55] 2026-03-03 04:35:58,707 | INFO     | reading metadata from: /scratch/boinc/var/slot44/slots/0/PanDA_Pilot-7035730586/jobReport.json
[2026-03-03 05:36:55] 2026-03-03 04:35:58,710 | INFO     | added worker_node to metadata from /scratch/boinc/var/slot44/slots/0/workernode_map.json
[2026-03-03 05:36:55] 2026-03-03 04:35:58,711 | INFO     | this job has now completed (state=finished)
[2026-03-03 05:36:55] 2026-03-03 04:35:58,711 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-03 05:36:55] 2026-03-03 04:35:58,711 | INFO     | log transfer has been attempted: DONE
[2026-03-03 05:36:55] 2026-03-03 04:35:58,711 | INFO     | job 7035730586 has finished - writing final server update
[2026-03-03 05:36:55] 2026-03-03 04:35:58,711 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_2650884/.job.ad'
[2026-03-03 05:36:55] 2026-03-03 04:35:58,712 | INFO     | total number of processed events: 400 (read)
[2026-03-03 05:36:55] 2026-03-03 04:35:58,724 | INFO     | using path: /scratch/boinc/var/slot44/slots/0/PanDA_Pilot-7035730586/memory_monitor_summary.json (trf name=prmon)
[2026-03-03 05:36:55] 2026-03-03 04:35:58,725 | INFO     | extracted standard info from prmon json
[2026-03-03 05:36:55] 2026-03-03 04:35:58,725 | INFO     | extracted standard memory fields from prmon json
[2026-03-03 05:36:55] 2026-03-03 04:35:58,725 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-03 05:36:55] 2026-03-03 04:35:58,726 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-03 05:36:55] 2026-03-03 04:35:58,726 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-03 05:36:55] 2026-03-03 04:35:58,731 | INFO     | fitting pss+swap vs Time
[2026-03-03 05:36:55] 2026-03-03 04:35:58,732 | INFO     | sum of square deviations: 5081276667.5
[2026-03-03 05:36:55] 2026-03-03 04:35:58,734 | INFO     | sum of deviations: 6030066367.0
[2026-03-03 05:36:55] 2026-03-03 04:35:58,734 | INFO     | mean x: 1772504782.5
[2026-03-03 05:36:55] 2026-03-03 04:35:58,734 | INFO     | mean y: 2339369.716535433
[2026-03-03 05:36:55] 2026-03-03 04:35:58,734 | INFO     | intersect: -2101132291.778051
[2026-03-03 05:36:55] 2026-03-03 04:35:58,734 | INFO     | chi2: 1.4203914895469376
[2026-03-03 05:36:55] 2026-03-03 04:35:58,735 | INFO     | sum of square deviations: 4787066500.0
[2026-03-03 05:36:55] 2026-03-03 04:35:58,737 | INFO     | sum of deviations: 5970079516.000001
[2026-03-03 05:36:55] 2026-03-03 04:35:58,737 | INFO     | mean x: 1772504630.0
[2026-03-03 05:36:55] 2026-03-03 04:35:58,737 | INFO     | mean y: 2339338.6184738954
[2026-03-03 05:36:55] 2026-03-03 04:35:58,737 | INFO     | intersect: -2208198907.2108164
[2026-03-03 05:36:55] 2026-03-03 04:35:58,737 | INFO     | chi2: 1.4206952784663565
[2026-03-03 05:36:55] 2026-03-03 04:35:58,737 | INFO     | current chi2=1.4206952784663565 (change=-0.021387689355682176 %)
[2026-03-03 05:36:55] 2026-03-03 04:35:58,738 | INFO     | right removable region: 248
[2026-03-03 05:36:55] 2026-03-03 04:35:58,738 | INFO     | sum of square deviations: 4787066500.0
[2026-03-03 05:36:55] 2026-03-03 04:35:58,740 | INFO     | sum of deviations: -28200051669.000004
[2026-03-03 05:36:55] 2026-03-03 04:35:58,740 | INFO     | mean x: 1772504935.0
[2026-03-03 05:36:55] 2026-03-03 04:35:58,740 | INFO     | mean y: 2356943.437751004
[2026-03-03 05:36:55] 2026-03-03 04:35:58,740 | INFO     | intersect: 10443977244.838932
[2026-03-03 05:36:55] 2026-03-03 04:35:58,740 | INFO     | chi2: 0.051768626856707425
[2026-03-03 05:36:55] 2026-03-03 04:35:58,740 | INFO     | current chi2=0.051768626856707425 (change=96.35532687729493 %)
[2026-03-03 05:36:55] 2026-03-03 04:35:58,741 | INFO     | sum of square deviations: 4504437945.0
[2026-03-03 05:36:55] 2026-03-03 04:35:58,742 | INFO     | sum of deviations: -27641141791.999943
[2026-03-03 05:36:55] 2026-03-03 04:35:58,743 | INFO     | mean x: 1772505087.5
[2026-03-03 05:36:55] 2026-03-03 04:35:58,743 | INFO     | mean y: 2356630.7459016396
[2026-03-03 05:36:55] 2026-03-03 04:35:58,743 | INFO     | intersect: 10879199657.302185
[2026-03-03 05:36:55] 2026-03-03 04:35:58,743 | INFO     | chi2: 0.04806607854411067
[2026-03-03 05:36:55] 2026-03-03 04:35:58,743 | INFO     | current chi2=0.04806607854411067 (change=7.152108405048476 %)
[2026-03-03 05:36:55] 2026-03-03 04:35:58,743 | INFO     | left removable region: 20
[2026-03-03 05:36:55] 2026-03-03 04:35:58,744 | INFO     | sum of square deviations: 3675146117.0
[2026-03-03 05:36:55] 2026-03-03 04:35:58,745 | INFO     | sum of deviations: -22081657728.999996
[2026-03-03 05:36:55] 2026-03-03 04:35:58,745 | INFO     | mean x: 1772505209.5
[2026-03-03 05:36:55] 2026-03-03 04:35:58,746 | INFO     | mean y: 2354085.1052631577
[2026-03-03 05:36:55] 2026-03-03 04:35:58,746 | INFO     | intersect: 10652230882.656393
[2026-03-03 05:36:55] 2026-03-03 04:35:58,746 | INFO     | chi2: 0.045979468432628616
[2026-03-03 05:36:55] 2026-03-03 04:35:58,746 | INFO     | current memory leak: -6.01 B/s (using 228 data points, chi2=0.05)
[2026-03-03 05:36:55] 2026-03-03 04:35:58,747 | INFO     | could have reported an average CPU frequency of 2604 MHz (12 samples)
[2026-03-03 05:36:55] 2026-03-03 04:35:58,747 | INFO     | ..............................
[2026-03-03 05:36:55] 2026-03-03 04:35:58,747 | INFO     | . Timing measurements:
[2026-03-03 05:36:55] 2026-03-03 04:35:58,747 | INFO     | . get job = 0 s
[2026-03-03 05:36:55] 2026-03-03 04:35:58,747 | INFO     | . initial setup = 6 s
[2026-03-03 05:36:55] 2026-03-03 04:35:58,747 | INFO     | . payload setup = 6 s
[2026-03-03 05:36:55] 2026-03-03 04:35:58,748 | INFO     | . stage-in = 0 s
[2026-03-03 05:36:55] 2026-03-03 04:35:58,748 | INFO     | . payload execution = 15489 s
[2026-03-03 05:36:55] 2026-03-03 04:35:58,748 | INFO     | . stage-out = 1 s
[2026-03-03 05:36:55] 2026-03-03 04:35:58,748 | INFO     | . log creation = 0 s
[2026-03-03 05:36:55] 2026-03-03 04:35:58,748 | INFO     | ..............................
[2026-03-03 05:36:55] 2026-03-03 04:35:58,847 | INFO     | 
[2026-03-03 05:36:55] 2026-03-03 04:35:58,847 | INFO     | job summary report
[2026-03-03 05:36:55] 2026-03-03 04:35:58,847 | INFO     | --------------------------------------------------
[2026-03-03 05:36:55] 2026-03-03 04:35:58,847 | INFO     | PanDA job id: 7035730586
[2026-03-03 05:36:55] 2026-03-03 04:35:58,847 | INFO     | task id: 48844684
[2026-03-03 05:36:55] 2026-03-03 04:35:58,847 | INFO     | errors: (none)
[2026-03-03 05:36:55] 2026-03-03 04:35:58,848 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-03 05:36:55] 2026-03-03 04:35:58,848 | INFO     | pilot state: finished 
[2026-03-03 05:36:55] 2026-03-03 04:35:58,848 | INFO     | transexitcode: 0
[2026-03-03 05:36:55] 2026-03-03 04:35:58,848 | INFO     | exeerrorcode: 0
[2026-03-03 05:36:55] 2026-03-03 04:35:58,848 | INFO     | exeerrordiag: 
[2026-03-03 05:36:55] 2026-03-03 04:35:58,848 | INFO     | exitcode: 0
[2026-03-03 05:36:55] 2026-03-03 04:35:58,848 | INFO     | exitmsg: OK
[2026-03-03 05:36:55] 2026-03-03 04:35:58,848 | INFO     | cpuconsumptiontime: 58762 s
[2026-03-03 05:36:55] 2026-03-03 04:35:58,848 | INFO     | nevents: 400
[2026-03-03 05:36:55] 2026-03-03 04:35:58,848 | INFO     | neventsw: 0
[2026-03-03 05:36:55] 2026-03-03 04:35:58,848 | INFO     | pid: 898542
[2026-03-03 05:36:55] 2026-03-03 04:35:58,848 | INFO     | pgrp: 898542
[2026-03-03 05:36:55] 2026-03-03 04:35:58,848 | INFO     | corecount: 4
[2026-03-03 05:36:55] 2026-03-03 04:35:58,848 | INFO     | event service: False
[2026-03-03 05:36:55] 2026-03-03 04:35:58,849 | INFO     | sizes: {0: 2281921, 1: 2282382, 12: 2282382, 15498: 2313866, 15499: 2313865, 15500: 2322941, 15501: 2323125, 15504: 2323319}
[2026-03-03 05:36:55] 2026-03-03 04:35:58,849 | INFO     | --------------------------------------------------
[2026-03-03 05:36:55] 2026-03-03 04:35:58,849 | INFO     | 
[2026-03-03 05:36:55] 2026-03-03 04:35:58,849 | INFO     | executing command: ls -lF /scratch/boinc/var/slot44/slots/0
[2026-03-03 05:36:55] 2026-03-03 04:35:58,872 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-03 05:36:55] 2026-03-03 04:35:58,872 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-03 05:36:55] 2026-03-03 04:35:58,872 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-03 05:36:55] 2026-03-03 04:35:58,872 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-03 05:36:55] 2026-03-03 04:35:58,873 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-03 05:36:55] 2026-03-03 04:35:58,873 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-03 05:36:55] 2026-03-03 04:35:58,873 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-03 05:36:55] 2026-03-03 04:35:58,873 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-03 05:36:55] 2026-03-03 04:35:58,873 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-03 05:36:55] 2026-03-03 04:35:58,873 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-03 05:36:55] 2026-03-03 04:35:58,873 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-03 05:36:55] 2026-03-03 04:35:58,873 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-03 05:36:55] 2026-03-03 04:35:58,873 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-03 05:36:55] 2026-03-03 04:35:58,873 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-03 05:36:55] 2026-03-03 04:35:58,873 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-03 05:36:55] 2026-03-03 04:35:58,874 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-03 05:36:55] 2026-03-03 04:35:58,874 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-03 05:36:55] 2026-03-03 04:35:58,874 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-03 05:36:55] 2026-03-03 04:35:58,874 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-03 05:36:55] 2026-03-03 04:35:58,874 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-03 05:36:55] 2026-03-03 04:35:58,874 | INFO     | job 7035730586 has completed (purged errors)
[2026-03-03 05:36:55] 2026-03-03 04:35:58,874 | INFO     | overall cleanup function is called
[2026-03-03 05:36:55] 2026-03-03 04:35:59,881 | INFO     | --- collectZombieJob: --- 10, [898542]
[2026-03-03 05:36:55] 2026-03-03 04:35:59,881 | INFO     | zombie collector waiting for pid 898542
[2026-03-03 05:36:55] 2026-03-03 04:35:59,881 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-03 05:36:55] 2026-03-03 04:35:59,881 | INFO     | collected zombie processes
[2026-03-03 05:36:55] 2026-03-03 04:35:59,881 | INFO     | will attempt to kill all subprocesses of pid=898542
[2026-03-03 05:36:55] 2026-03-03 04:36:00,243 | INFO     | process IDs to be killed: [898542] (in reverse order)
[2026-03-03 05:36:55] 2026-03-03 04:36:00,375 | WARNING  | found no corresponding commands to process id(s)
[2026-03-03 05:36:55] 2026-03-03 04:36:00,376 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-03 05:36:55] 2026-03-03 04:36:00,387 | INFO     | did not find any defunct processes belonging to 898542
[2026-03-03 05:36:55] 2026-03-03 04:36:00,397 | INFO     | did not find any defunct processes belonging to 898542
[2026-03-03 05:36:55] 2026-03-03 04:36:00,397 | INFO     | ready for new job
[2026-03-03 05:36:55] 2026-03-03 04:36:00,398 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-03 05:36:55] 2026-03-03 04:36:00,400 | INFO     | **************************************
[2026-03-03 05:36:55] 2026-03-03 04:36:00,400 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-03 05:36:55] 2026-03-03 04:36:00,400 | INFO     | **************************************
[2026-03-03 05:36:55] 2026-03-03 04:36:00,400 | INFO     | 
[2026-03-03 05:36:55] 2026-03-03 04:36:00,405 | INFO     | architecture information:
[2026-03-03 05:36:55] 2026-03-03 04:36:00,405 | INFO     | executing command: cat /etc/os-release
[2026-03-03 05:36:55] 2026-03-03 04:36:00,424 | INFO     | cat /etc/os-release:
[2026-03-03 05:36:55] NAME="CentOS Linux"
[2026-03-03 05:36:55] VERSION="7 (Core)"
[2026-03-03 05:36:55] ID="centos"
[2026-03-03 05:36:55] ID_LIKE="rhel fedora"
[2026-03-03 05:36:55] VERSION_ID="7"
[2026-03-03 05:36:55] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-03 05:36:55] ANSI_COLOR="0;31"
[2026-03-03 05:36:55] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-03 05:36:55] HOME_URL="https://www.centos.org/"
[2026-03-03 05:36:55] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-03 05:36:55] 
[2026-03-03 05:36:55] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-03 05:36:55] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-03 05:36:55] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-03 05:36:55] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-03 05:36:55] 
[2026-03-03 05:36:55] 2026-03-03 04:36:00,425 | INFO     | **************************************
[2026-03-03 05:36:55] 2026-03-03 04:36:00,928 | INFO     | executing command: df -mP /scratch/boinc/var/slot44/slots/0
[2026-03-03 05:36:55] 2026-03-03 04:36:00,944 | INFO     | sufficient remaining disk space (674232270848 B)
[2026-03-03 05:36:55] 2026-03-03 04:36:00,945 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-03 05:36:55] 2026-03-03 04:36:00,945 | INFO     | current server update state: UPDATING_FINAL
[2026-03-03 05:36:55] 2026-03-03 04:36:00,945 | INFO     | update_server=False
[2026-03-03 05:36:55] 2026-03-03 04:36:00,945 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-03 05:36:55] 2026-03-03 04:36:00,945 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-03 05:36:55] 2026-03-03 04:36:00,945 | INFO     | aborting loop
[2026-03-03 05:36:55] 2026-03-03 04:36:01,054 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-03 05:36:55] 2026-03-03 04:36:01,451 | INFO     | all data control threads have been joined
[2026-03-03 05:36:55] 2026-03-03 04:36:01,866 | INFO     | all job control threads have been joined
[2026-03-03 05:36:55] 2026-03-03 04:36:01,949 | INFO     | [job] retrieve thread has finished
[2026-03-03 05:36:55] 2026-03-03 04:36:01,950 | INFO     | [job] job monitor thread has finished
[2026-03-03 05:36:55] 2026-03-03 04:36:02,001 | INFO     | [data] copytool_in thread has finished
[2026-03-03 05:36:55] 2026-03-03 04:36:02,053 | INFO     | [job] validate thread has finished
[2026-03-03 05:36:55] 2026-03-03 04:36:02,197 | INFO     | [payload] execute_payloads thread has finished
[2026-03-03 05:36:55] 2026-03-03 04:36:02,261 | INFO     | all payload control threads have been joined
[2026-03-03 05:36:55] 2026-03-03 04:36:02,438 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-03 05:36:55] 2026-03-03 04:36:02,456 | INFO     | [data] control thread has finished
[2026-03-03 05:36:55] 2026-03-03 04:36:02,872 | INFO     | [job] control thread has finished
[2026-03-03 05:36:55] 2026-03-03 04:36:02,939 | INFO     | [job] create_data_payload thread has finished
[2026-03-03 05:36:55] 2026-03-03 04:36:03,059 | INFO     | [data] copytool_out thread has finished
[2026-03-03 05:36:55] 2026-03-03 04:36:03,113 | INFO     | [payload] validate_pre thread has finished
[2026-03-03 05:36:55] 2026-03-03 04:36:03,266 | INFO     | [payload] control thread has finished
[2026-03-03 05:36:55] 2026-03-03 04:36:03,346 | INFO     | [payload] validate_post thread has finished
[2026-03-03 05:36:55] 2026-03-03 04:36:03,403 | INFO     | [payload] failed_post thread has finished
[2026-03-03 05:36:55] 2026-03-03 04:36:03,857 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-03 05:36:55] 2026-03-03 04:36:04,862 | INFO     | [job] queue monitor thread has finished
[2026-03-03 05:36:55] 2026-03-03 04:36:06,443 | INFO     | [data] queue_monitor thread has finished
[2026-03-03 05:36:55] 2026-03-03 04:36:11,123 | INFO     | job.realtimelogging is not enabled
[2026-03-03 05:36:55] 2026-03-03 04:36:12,128 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-03 05:36:55] 2026-03-03 04:36:31,197 | INFO     | PID=893743 has CPU usage=6.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-03 05:36:55] 2026-03-03 04:36:31,197 | INFO     | .. there are 12 such processes running
[2026-03-03 05:36:55] 2026-03-03 04:36:31,198 | INFO     | found 0 job(s) in 20 queues
[2026-03-03 05:36:55] 2026-03-03 04:36:31,198 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-03 05:36:55] 2026-03-03 04:36:31,198 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-03 05:36:55] 2026-03-03 04:36:48,959 | INFO     | [monitor] cgroup control has ended
[2026-03-03 05:36:55] 2026-03-03 04:36:50,283 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23455766980416)>', '<ExcThread(monitor, started 23455526561536)>']
[2026-03-03 05:36:55] 2026-03-03 04:36:50,290 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-03 05:36:55] 2026-03-03 04:36:50,290 | INFO     | [monitor] control thread has ended
[2026-03-03 05:36:55] 2026-03-03 04:36:55,308 | INFO     | all workflow threads have been joined
[2026-03-03 05:36:55] 2026-03-03 04:36:55,309 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-03 05:36:55] 2026-03-03 04:36:55,309 | INFO     | traces error code: 0
[2026-03-03 05:36:55] 2026-03-03 04:36:55,309 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-03 05:36:55] 2026-03-03 04:36:55,460 [wrapper] ==== pilot stdout END ====
[2026-03-03 05:36:55] 2026-03-03 04:36:55,463 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-03 05:36:55] 2026-03-03 04:36:55,465 [wrapper] pilotpid: 893743
[2026-03-03 05:36:55] 2026-03-03 04:36:55,468 [wrapper] Pilot exit status: 0
[2026-03-03 05:36:55] 2026-03-03 04:36:55,479 [wrapper] pandaids: 7035730586
[2026-03-03 05:36:55] 2026-03-03 04:36:55,558 [wrapper] cleanup supervisor_pilot 1171298 893744
[2026-03-03 05:36:55] 2026-03-03 04:36:55,561 [wrapper] Test setup, not cleaning
[2026-03-03 05:36:55] 2026-03-03 04:36:55,564 [wrapper] apfmon messages muted
[2026-03-03 05:36:55] 2026-03-03 04:36:55,567 [wrapper] ==== wrapper stdout END ====
[2026-03-03 05:36:55] 2026-03-03 04:36:55,569 [wrapper] ==== wrapper stderr END ====
[2026-03-03 05:36:55]  *** Error codes and diagnostics ***
[2026-03-03 05:36:55]     "exeErrorCode": 0,
[2026-03-03 05:36:55]     "exeErrorDiag": "",
[2026-03-03 05:36:55]     "pilotErrorCode": 0,
[2026-03-03 05:36:55]     "pilotErrorDiag": "",
[2026-03-03 05:36:55]  *** Listing of results directory ***
[2026-03-03 05:36:55] total 409008
[2026-03-03 05:36:55] -rw-r--r-- 1 boinc boinc    584627 Mar  2 01:56 pilot3.tar.gz
[2026-03-03 05:36:55] -rwx------ 1 boinc boinc     36322 Mar  2 01:58 runpilot2-wrapper.sh
[2026-03-03 05:36:55] -rw-r--r-- 1 boinc boinc      5111 Mar  2 01:58 queuedata.json
[2026-03-03 05:36:55] -rw-r--r-- 1 boinc boinc       100 Mar  3 01:17 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-03 05:36:55] -rwxr-xr-x 1 boinc boinc      7986 Mar  3 01:17 run_atlas
[2026-03-03 05:36:55] -rw-r--r-- 1 boinc boinc       105 Mar  3 01:17 job.xml
[2026-03-03 05:36:55] -rw-r--r-- 1 boinc boinc      6641 Mar  3 01:17 init_data.xml
[2026-03-03 05:36:55] -rw-r--r-- 2 boinc boinc 233440801 Mar  3 01:17 EVNT.48453921._000001.pool.root.1
[2026-03-03 05:36:55] -rw-r--r-- 2 boinc boinc     15845 Mar  3 01:17 start_atlas.sh
[2026-03-03 05:36:55] drwxrwx--x 2 boinc boinc      4096 Mar  3 01:17 shared
[2026-03-03 05:36:55] -rw-r--r-- 2 boinc boinc    597960 Mar  3 01:17 input.tar.gz
[2026-03-03 05:36:55] -rw-r--r-- 1 boinc boinc         0 Mar  3 01:17 boinc_lockfile
[2026-03-03 05:36:55] -rw-r--r-- 1 boinc boinc      2614 Mar  3 01:17 pandaJob.out
[2026-03-03 05:36:55] -rw------- 1 boinc boinc    997714 Mar  3 01:17 agis_schedconf.cvmfs.json
[2026-03-03 05:36:55] -rw------- 1 boinc boinc       447 Mar  3 01:17 workernode_map.json
[2026-03-03 05:36:55] drwx------ 5 boinc boinc      4096 Mar  3 01:17 pilot3
[2026-03-03 05:36:55] -rw------- 1 boinc boinc 176260469 Mar  3 05:35 HITS.48844684._000014.pool.root.1
[2026-03-03 05:36:55] -rw-r--r-- 1 boinc boinc       530 Mar  3 05:35 boinc_task_state.xml
[2026-03-03 05:36:55] -rw------- 1 boinc boinc      1034 Mar  3 05:35 memory_monitor_summary.json
[2026-03-03 05:36:55] -rw------- 1 boinc boinc   1512931 Mar  3 05:35 agis_ddmendpoints.agis.ALL.json
[2026-03-03 05:36:55] -rw------- 1 boinc boinc    423262 Mar  3 05:35 log.48844684._000014.job.log.tgz.1
[2026-03-03 05:36:55] -rw------- 1 boinc boinc      6389 Mar  3 05:35 heartbeat.json
[2026-03-03 05:36:55] -rw------- 1 boinc boinc        95 Mar  3 05:36 pilot_heartbeat.json
[2026-03-03 05:36:55] -rw-r--r-- 1 boinc boinc        28 Mar  3 05:36 wrapper_checkpoint.txt
[2026-03-03 05:36:55] -rw-r--r-- 1 boinc boinc      8192 Mar  3 05:36 boinc_mmap_file
[2026-03-03 05:36:55] -rw------- 1 boinc boinc      4901 Mar  3 05:36 pilotlog.txt
[2026-03-03 05:36:55] -rw------- 1 boinc boinc   2173461 Mar  3 05:36 log.48844684._000014.job.log.1
[2026-03-03 05:36:55] -rw------- 1 boinc boinc       357 Mar  3 05:36 output.list
[2026-03-03 05:36:55] -rw-r--r-- 1 boinc boinc       620 Mar  3 05:36 runtime_log
[2026-03-03 05:36:55] -rw------- 1 boinc boinc   2611200 Mar  3 05:36 result.tar.gz
[2026-03-03 05:36:55] -rw-r--r-- 1 boinc boinc      9205 Mar  3 05:36 runtime_log.err
[2026-03-03 05:36:55] -rw------- 1 boinc boinc       665 Mar  3 05:36 LNpKDm8m6G9n9Rq4apOajLDm4fhM0noT9bVooX4SDmrCALDmYqUS3m.diag
[2026-03-03 05:36:55] -rw-r--r-- 1 boinc boinc     21127 Mar  3 05:36 stderr.txt
[2026-03-03 05:36:55] HITS file was successfully produced:
[2026-03-03 05:36:55] -rw------- 1 boinc boinc 176260469 Mar  3 05:35 shared/HITS.pool.root.1
[2026-03-03 05:36:55]  *** Contents of shared directory: ***
[2026-03-03 05:36:55] total 403264
[2026-03-03 05:36:55] -rw-r--r-- 2 boinc boinc 233440801 Mar  3 01:17 ATLAS.root_0
[2026-03-03 05:36:55] -rw-r--r-- 2 boinc boinc     15845 Mar  3 01:17 start_atlas.sh
[2026-03-03 05:36:55] -rw-r--r-- 2 boinc boinc    597960 Mar  3 01:17 input.tar.gz
[2026-03-03 05:36:55] -rw------- 1 boinc boinc 176260469 Mar  3 05:35 HITS.pool.root.1
[2026-03-03 05:36:55] -rw------- 1 boinc boinc   2611200 Mar  3 05:36 result.tar.gz
05:36:57 (889951): run_atlas exited; CPU time 59437.191575
05:36:57 (889951): called boinc_finish(0)

</stderr_txt>
]]>

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