Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
15:35:43 (407804): wrapper (7.7.26015): starting
15:35:43 (407804): wrapper: running run_atlas (--nthreads 4)
[2026-03-02 15:35:43] Arguments: --nthreads 4
[2026-03-02 15:35:43] Threads: 4
[2026-03-02 15:35:43] Checking for CVMFS
[2026-03-02 15:35:43] No cvmfs_config command found, will try listing directly
[2026-03-02 15:35:43] CVMFS is ok
[2026-03-02 15:35:43] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-02 15:35:43] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-02 15:35:43] Further information can be found at the LHC@home message board.
[2026-03-02 15:35:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-02 15:35:43] Checking for apptainer binary...
[2026-03-02 15:35:43] which: no apptainer in ((null))
[2026-03-02 15:35:43] apptainer is not installed, using version from CVMFS
[2026-03-02 15:35:43] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-02 15:35:43] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot28/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut03.grid.cesnet.cz
[2026-03-02 15:35:43] apptainer works
[2026-03-02 15:35:43] Set ATHENA_PROC_NUMBER=4
[2026-03-02 15:35:43] Set ATHENA_CORE_NUMBER=4
[2026-03-02 15:35:43] Starting ATLAS job with PandaID=7035725734
[2026-03-02 15:35:43] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot28/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-02 22:43:48]  *** The last 200 lines of the pilot log: ***
[2026-03-02 22:43:48] 2026-03-02 21:43:08,954 | INFO     | time since job start (25628s) is within the limit (349056.0s)
[2026-03-02 22:43:48] 2026-03-02 21:43:09,021 | INFO     | job 7035725734 has state=finished
[2026-03-02 22:43:48] 2026-03-02 21:43:09,022 | INFO     | preparing for final server update for job 7035725734 in state='finished'
[2026-03-02 22:43:48] 2026-03-02 21:43:09,022 | INFO     | reading metadata from: /scratch/boinc/var/slot28/slots/0/PanDA_Pilot-7035725734/jobReport.json
[2026-03-02 22:43:48] 2026-03-02 21:43:09,024 | INFO     | added worker_node to metadata from /scratch/boinc/var/slot28/slots/0/workernode_map.json
[2026-03-02 22:43:48] 2026-03-02 21:43:09,025 | INFO     | this job has now completed (state=finished)
[2026-03-02 22:43:48] 2026-03-02 21:43:09,025 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-02 22:43:48] 2026-03-02 21:43:09,025 | INFO     | log transfer has been attempted: DONE
[2026-03-02 22:43:48] 2026-03-02 21:43:09,025 | INFO     | job 7035725734 has finished - writing final server update
[2026-03-02 22:43:48] 2026-03-02 21:43:09,026 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_2518619/.job.ad'
[2026-03-02 22:43:48] 2026-03-02 21:43:09,026 | INFO     | total number of processed events: 400 (read)
[2026-03-02 22:43:48] 2026-03-02 21:43:09,039 | INFO     | using path: /scratch/boinc/var/slot28/slots/0/PanDA_Pilot-7035725734/memory_monitor_summary.json (trf name=prmon)
[2026-03-02 22:43:48] 2026-03-02 21:43:09,039 | INFO     | extracted standard info from prmon json
[2026-03-02 22:43:48] 2026-03-02 21:43:09,040 | INFO     | extracted standard memory fields from prmon json
[2026-03-02 22:43:48] 2026-03-02 21:43:09,040 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-02 22:43:48] 2026-03-02 21:43:09,040 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-02 22:43:48] 2026-03-02 21:43:09,040 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-02 22:43:48] 2026-03-02 21:43:09,047 | INFO     | fitting pss+swap vs Time
[2026-03-02 22:43:48] 2026-03-02 21:43:09,048 | INFO     | sum of square deviations: 22973323765.0
[2026-03-02 22:43:48] 2026-03-02 21:43:09,052 | INFO     | sum of deviations: 66025693864.0
[2026-03-02 22:43:48] 2026-03-02 21:43:09,053 | INFO     | mean x: 1772474962.5
[2026-03-02 22:43:48] 2026-03-02 21:43:09,053 | INFO     | mean y: 2338976.7523809522
[2026-03-02 22:43:48] 2026-03-02 21:43:09,053 | INFO     | intersect: -5091781945.964257
[2026-03-02 22:43:48] 2026-03-02 21:43:09,053 | INFO     | chi2: 1.3161651384424733
[2026-03-02 22:43:48] 2026-03-02 21:43:09,054 | INFO     | sum of square deviations: 22162573680.0
[2026-03-02 22:43:48] 2026-03-02 21:43:09,058 | INFO     | sum of deviations: 64386376387.0
[2026-03-02 22:43:48] 2026-03-02 21:43:09,058 | INFO     | mean x: 1772474810.0
[2026-03-02 22:43:48] 2026-03-02 21:43:09,059 | INFO     | mean y: 2338669.2674698797
[2026-03-02 22:43:48] 2026-03-02 21:43:09,059 | INFO     | intersect: -5147028543.265417
[2026-03-02 22:43:48] 2026-03-02 21:43:09,059 | INFO     | chi2: 1.3161335609563622
[2026-03-02 22:43:48] 2026-03-02 21:43:09,059 | INFO     | current chi2=1.3161335609563622 (change=0.0023992039591941633 %)
[2026-03-02 22:43:48] 2026-03-02 21:43:09,060 | INFO     | right removable region: 414
[2026-03-02 22:43:48] 2026-03-02 21:43:09,060 | INFO     | sum of square deviations: 22162573680.0
[2026-03-02 22:43:48] 2026-03-02 21:43:09,064 | INFO     | sum of deviations: 10736571387.0
[2026-03-02 22:43:48] 2026-03-02 21:43:09,064 | INFO     | mean x: 1772475115.0
[2026-03-02 22:43:48] 2026-03-02 21:43:09,065 | INFO     | mean y: 2349314.9036144577
[2026-03-02 22:43:48] 2026-03-02 21:43:09,065 | INFO     | intersect: -856319262.0700024
[2026-03-02 22:43:48] 2026-03-02 21:43:09,065 | INFO     | chi2: 0.019354523907320086
[2026-03-02 22:43:48] 2026-03-02 21:43:09,065 | INFO     | current chi2=0.019354523907320086 (change=98.52947602530911 %)
[2026-03-02 22:43:48] 2026-03-02 21:43:09,066 | INFO     | sum of square deviations: 21371126282.5
[2026-03-02 22:43:48] 2026-03-02 21:43:09,070 | INFO     | sum of deviations: 9436631405.500002
[2026-03-02 22:43:48] 2026-03-02 21:43:09,070 | INFO     | mean x: 1772475267.5
[2026-03-02 22:43:48] 2026-03-02 21:43:09,070 | INFO     | mean y: 2349560.8804878048
[2026-03-02 22:43:48] 2026-03-02 21:43:09,070 | INFO     | intersect: -780304359.8190011
[2026-03-02 22:43:48] 2026-03-02 21:43:09,071 | INFO     | chi2: 0.015765518913719273
[2026-03-02 22:43:48] 2026-03-02 21:43:09,071 | INFO     | current chi2=0.015765518913719273 (change=18.54349407294598 %)
[2026-03-02 22:43:48] 2026-03-02 21:43:09,071 | INFO     | left removable region: 20
[2026-03-02 22:43:48] 2026-03-02 21:43:09,072 | INFO     | sum of square deviations: 18965499782.5
[2026-03-02 22:43:48] 2026-03-02 21:43:09,076 | INFO     | sum of deviations: 15619680526.500006
[2026-03-02 22:43:48] 2026-03-02 21:43:09,076 | INFO     | mean x: 1772475389.5
[2026-03-02 22:43:48] 2026-03-02 21:43:09,076 | INFO     | mean y: 2347872.931472081
[2026-03-02 22:43:48] 2026-03-02 21:43:09,076 | INFO     | intersect: -1457434344.388203
[2026-03-02 22:43:48] 2026-03-02 21:43:09,076 | INFO     | chi2: 0.007285399602202712
[2026-03-02 22:43:48] 2026-03-02 21:43:09,077 | INFO     | current memory leak: 0.82 B/s (using 394 data points, chi2=0.01)
[2026-03-02 22:43:48] 2026-03-02 21:43:09,077 | INFO     | could have reported an average CPU frequency of 2613 MHz (18 samples)
[2026-03-02 22:43:48] 2026-03-02 21:43:09,077 | INFO     | ..............................
[2026-03-02 22:43:48] 2026-03-02 21:43:09,078 | INFO     | . Timing measurements:
[2026-03-02 22:43:48] 2026-03-02 21:43:09,078 | INFO     | . get job = 0 s
[2026-03-02 22:43:48] 2026-03-02 21:43:09,078 | INFO     | . initial setup = 5 s
[2026-03-02 22:43:48] 2026-03-02 21:43:09,078 | INFO     | . payload setup = 6 s
[2026-03-02 22:43:48] 2026-03-02 21:43:09,078 | INFO     | . stage-in = 0 s
[2026-03-02 22:43:48] 2026-03-02 21:43:09,078 | INFO     | . payload execution = 25601 s
[2026-03-02 22:43:48] 2026-03-02 21:43:09,078 | INFO     | . stage-out = 1 s
[2026-03-02 22:43:48] 2026-03-02 21:43:09,078 | INFO     | . log creation = 0 s
[2026-03-02 22:43:48] 2026-03-02 21:43:09,078 | INFO     | ..............................
[2026-03-02 22:43:48] 2026-03-02 21:43:09,170 | INFO     | 
[2026-03-02 22:43:48] 2026-03-02 21:43:09,170 | INFO     | job summary report
[2026-03-02 22:43:48] 2026-03-02 21:43:09,170 | INFO     | --------------------------------------------------
[2026-03-02 22:43:48] 2026-03-02 21:43:09,170 | INFO     | PanDA job id: 7035725734
[2026-03-02 22:43:48] 2026-03-02 21:43:09,170 | INFO     | task id: 48844171
[2026-03-02 22:43:48] 2026-03-02 21:43:09,170 | INFO     | errors: (none)
[2026-03-02 22:43:48] 2026-03-02 21:43:09,170 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-02 22:43:48] 2026-03-02 21:43:09,171 | INFO     | pilot state: finished 
[2026-03-02 22:43:48] 2026-03-02 21:43:09,171 | INFO     | transexitcode: 0
[2026-03-02 22:43:48] 2026-03-02 21:43:09,171 | INFO     | exeerrorcode: 0
[2026-03-02 22:43:48] 2026-03-02 21:43:09,171 | INFO     | exeerrordiag: 
[2026-03-02 22:43:48] 2026-03-02 21:43:09,171 | INFO     | exitcode: 0
[2026-03-02 22:43:48] 2026-03-02 21:43:09,171 | INFO     | exitmsg: OK
[2026-03-02 22:43:48] 2026-03-02 21:43:09,171 | INFO     | cpuconsumptiontime: 99291 s
[2026-03-02 22:43:48] 2026-03-02 21:43:09,171 | INFO     | nevents: 400
[2026-03-02 22:43:48] 2026-03-02 21:43:09,171 | INFO     | neventsw: 0
[2026-03-02 22:43:48] 2026-03-02 21:43:09,171 | INFO     | pid: 417102
[2026-03-02 22:43:48] 2026-03-02 21:43:09,171 | INFO     | pgrp: 417102
[2026-03-02 22:43:48] 2026-03-02 21:43:09,171 | INFO     | corecount: 4
[2026-03-02 22:43:48] 2026-03-02 21:43:09,172 | INFO     | event service: False
[2026-03-02 22:43:48] 2026-03-02 21:43:09,172 | INFO     | sizes: {0: 2282374, 11: 2282374, 25611: 2318447, 25612: 2327467, 25616: 2327523, 25617: 2327717}
[2026-03-02 22:43:48] 2026-03-02 21:43:09,172 | INFO     | --------------------------------------------------
[2026-03-02 22:43:48] 2026-03-02 21:43:09,172 | INFO     | 
[2026-03-02 22:43:48] 2026-03-02 21:43:09,172 | INFO     | executing command: ls -lF /scratch/boinc/var/slot28/slots/0
[2026-03-02 22:43:48] 2026-03-02 21:43:09,192 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-02 22:43:48] 2026-03-02 21:43:09,192 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-02 22:43:48] 2026-03-02 21:43:09,192 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-02 22:43:48] 2026-03-02 21:43:09,192 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-02 22:43:48] 2026-03-02 21:43:09,192 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-02 22:43:48] 2026-03-02 21:43:09,193 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-02 22:43:48] 2026-03-02 21:43:09,193 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-02 22:43:48] 2026-03-02 21:43:09,193 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-02 22:43:48] 2026-03-02 21:43:09,193 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-02 22:43:48] 2026-03-02 21:43:09,193 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-02 22:43:48] 2026-03-02 21:43:09,193 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-02 22:43:48] 2026-03-02 21:43:09,193 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-02 22:43:48] 2026-03-02 21:43:09,193 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-02 22:43:48] 2026-03-02 21:43:09,194 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-02 22:43:48] 2026-03-02 21:43:09,194 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-02 22:43:48] 2026-03-02 21:43:09,194 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-02 22:43:48] 2026-03-02 21:43:09,194 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-02 22:43:48] 2026-03-02 21:43:09,194 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-02 22:43:48] 2026-03-02 21:43:09,195 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-02 22:43:48] 2026-03-02 21:43:09,195 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-02 22:43:48] 2026-03-02 21:43:09,195 | INFO     | job 7035725734 has completed (purged errors)
[2026-03-02 22:43:48] 2026-03-02 21:43:09,195 | INFO     | overall cleanup function is called
[2026-03-02 22:43:48] 2026-03-02 21:43:10,203 | INFO     | --- collectZombieJob: --- 10, [417102]
[2026-03-02 22:43:48] 2026-03-02 21:43:10,203 | INFO     | zombie collector waiting for pid 417102
[2026-03-02 22:43:48] 2026-03-02 21:43:10,204 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-02 22:43:48] 2026-03-02 21:43:10,204 | INFO     | collected zombie processes
[2026-03-02 22:43:48] 2026-03-02 21:43:10,204 | INFO     | will attempt to kill all subprocesses of pid=417102
[2026-03-02 22:43:48] 2026-03-02 21:43:10,554 | INFO     | process IDs to be killed: [417102] (in reverse order)
[2026-03-02 22:43:48] 2026-03-02 21:43:10,663 | WARNING  | found no corresponding commands to process id(s)
[2026-03-02 22:43:48] 2026-03-02 21:43:10,663 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-02 22:43:48] 2026-03-02 21:43:10,675 | INFO     | did not find any defunct processes belonging to 417102
[2026-03-02 22:43:48] 2026-03-02 21:43:10,687 | INFO     | did not find any defunct processes belonging to 417102
[2026-03-02 22:43:48] 2026-03-02 21:43:10,687 | INFO     | ready for new job
[2026-03-02 22:43:48] 2026-03-02 21:43:10,687 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-02 22:43:48] 2026-03-02 21:43:10,690 | INFO     | **************************************
[2026-03-02 22:43:48] 2026-03-02 21:43:10,690 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-02 22:43:48] 2026-03-02 21:43:10,690 | INFO     | **************************************
[2026-03-02 22:43:48] 2026-03-02 21:43:10,690 | INFO     | 
[2026-03-02 22:43:48] 2026-03-02 21:43:10,694 | INFO     | architecture information:
[2026-03-02 22:43:48] 2026-03-02 21:43:10,694 | INFO     | executing command: cat /etc/os-release
[2026-03-02 22:43:48] 2026-03-02 21:43:10,728 | INFO     | cat /etc/os-release:
[2026-03-02 22:43:48] NAME="CentOS Linux"
[2026-03-02 22:43:48] VERSION="7 (Core)"
[2026-03-02 22:43:48] ID="centos"
[2026-03-02 22:43:48] ID_LIKE="rhel fedora"
[2026-03-02 22:43:48] VERSION_ID="7"
[2026-03-02 22:43:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-02 22:43:48] ANSI_COLOR="0;31"
[2026-03-02 22:43:48] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-02 22:43:48] HOME_URL="https://www.centos.org/"
[2026-03-02 22:43:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-02 22:43:48] 
[2026-03-02 22:43:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-02 22:43:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-02 22:43:48] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-02 22:43:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-02 22:43:48] 
[2026-03-02 22:43:48] 2026-03-02 21:43:10,728 | INFO     | **************************************
[2026-03-02 22:43:48] 2026-03-02 21:43:11,232 | INFO     | executing command: df -mP /scratch/boinc/var/slot28/slots/0
[2026-03-02 22:43:48] 2026-03-02 21:43:11,251 | INFO     | sufficient remaining disk space (674351808512 B)
[2026-03-02 22:43:48] 2026-03-02 21:43:11,252 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-02 22:43:48] 2026-03-02 21:43:11,252 | INFO     | current server update state: UPDATING_FINAL
[2026-03-02 22:43:48] 2026-03-02 21:43:11,252 | INFO     | update_server=False
[2026-03-02 22:43:48] 2026-03-02 21:43:11,252 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-02 22:43:48] 2026-03-02 21:43:11,396 | INFO     | all payload control threads have been joined
[2026-03-02 22:43:48] 2026-03-02 21:43:11,479 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-02 22:43:48] 2026-03-02 21:43:11,480 | INFO     | aborting loop
[2026-03-02 22:43:48] 2026-03-02 21:43:11,674 | INFO     | all data control threads have been joined
[2026-03-02 22:43:48] 2026-03-02 21:43:12,257 | INFO     | [job] retrieve thread has finished
[2026-03-02 22:43:48] 2026-03-02 21:43:12,355 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-02 22:43:48] 2026-03-02 21:43:12,401 | INFO     | [payload] control thread has finished
[2026-03-02 22:43:48] 2026-03-02 21:43:12,468 | INFO     | [payload] validate_post thread has finished
[2026-03-02 22:43:48] 2026-03-02 21:43:12,485 | INFO     | [job] job monitor thread has finished
[2026-03-02 22:43:48] 2026-03-02 21:43:12,587 | INFO     | all job control threads have been joined
[2026-03-02 22:43:48] 2026-03-02 21:43:12,679 | INFO     | [data] control thread has finished
[2026-03-02 22:43:48] 2026-03-02 21:43:12,685 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-02 22:43:48] 2026-03-02 21:43:12,935 | INFO     | [payload] validate_pre thread has finished
[2026-03-02 22:43:48] 2026-03-02 21:43:13,062 | INFO     | [payload] failed_post thread has finished
[2026-03-02 22:43:48] 2026-03-02 21:43:13,167 | INFO     | [job] validate thread has finished
[2026-03-02 22:43:48] 2026-03-02 21:43:13,352 | INFO     | [payload] execute_payloads thread has finished
[2026-03-02 22:43:48] 2026-03-02 21:43:13,386 | INFO     | [job] create_data_payload thread has finished
[2026-03-02 22:43:48] 2026-03-02 21:43:13,592 | INFO     | [job] control thread has finished
[2026-03-02 22:43:48] 2026-03-02 21:43:13,746 | INFO     | [data] copytool_in thread has finished
[2026-03-02 22:43:48] 2026-03-02 21:43:14,108 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-02 22:43:48] 2026-03-02 21:43:14,180 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-02 22:43:48] 2026-03-02 21:43:14,690 | INFO     | [data] copytool_out thread has finished
[2026-03-02 22:43:48] 2026-03-02 21:43:15,185 | INFO     | [job] queue monitor thread has finished
[2026-03-02 22:43:48] 2026-03-02 21:43:18,112 | INFO     | [data] queue_monitor thread has finished
[2026-03-02 22:43:48] 2026-03-02 21:43:42,243 | INFO     | [monitor] cgroup control has ended
[2026-03-02 22:43:48] 2026-03-02 21:43:42,434 | INFO     | PID=411896 has CPU usage=6.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-02 22:43:48] 2026-03-02 21:43:42,434 | INFO     | .. there are 12 such processes running
[2026-03-02 22:43:48] 2026-03-02 21:43:42,435 | INFO     | found 0 job(s) in 20 queues
[2026-03-02 22:43:48] 2026-03-02 21:43:42,435 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-02 22:43:48] 2026-03-02 21:43:42,435 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-02 22:43:48] 2026-03-02 21:43:43,587 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22509915715392)>', '<ExcThread(monitor, started 22509669054208)>']
[2026-03-02 22:43:48] 2026-03-02 21:43:44,446 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-02 22:43:48] 2026-03-02 21:43:44,446 | INFO     | [monitor] control thread has ended
[2026-03-02 22:43:48] 2026-03-02 21:43:48,608 | INFO     | all workflow threads have been joined
[2026-03-02 22:43:48] 2026-03-02 21:43:48,608 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-02 22:43:48] 2026-03-02 21:43:48,608 | INFO     | traces error code: 0
[2026-03-02 22:43:48] 2026-03-02 21:43:48,609 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-02 22:43:48] 2026-03-02 21:43:48,735 [wrapper] ==== pilot stdout END ====
[2026-03-02 22:43:48] 2026-03-02 21:43:48,737 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-02 22:43:48] 2026-03-02 21:43:48,740 [wrapper] pilotpid: 411896
[2026-03-02 22:43:48] 2026-03-02 21:43:48,742 [wrapper] Pilot exit status: 0
[2026-03-02 22:43:48] 2026-03-02 21:43:48,751 [wrapper] pandaids: 7035725734
[2026-03-02 22:43:48] 2026-03-02 21:43:48,815 [wrapper] cleanup supervisor_pilot  843918 411897
[2026-03-02 22:43:48] 2026-03-02 21:43:48,819 [wrapper] Test setup, not cleaning
[2026-03-02 22:43:48] 2026-03-02 21:43:48,821 [wrapper] apfmon messages muted
[2026-03-02 22:43:48] 2026-03-02 21:43:48,824 [wrapper] ==== wrapper stdout END ====
[2026-03-02 22:43:48] 2026-03-02 21:43:48,827 [wrapper] ==== wrapper stderr END ====
[2026-03-02 22:43:48]  *** Error codes and diagnostics ***
[2026-03-02 22:43:48]     "exeErrorCode": 0,
[2026-03-02 22:43:48]     "exeErrorDiag": "",
[2026-03-02 22:43:48]     "pilotErrorCode": 0,
[2026-03-02 22:43:48]     "pilotErrorDiag": "",
[2026-03-02 22:43:48]  *** Listing of results directory ***
[2026-03-02 22:43:48] total 467384
[2026-03-02 22:43:48] -rw-r--r-- 1 boinc boinc    584627 Mar  2 01:56 pilot3.tar.gz
[2026-03-02 22:43:48] -rw-r--r-- 1 boinc boinc      5111 Mar  2 01:57 queuedata.json
[2026-03-02 22:43:48] -rwx------ 1 boinc boinc     36322 Mar  2 01:58 runpilot2-wrapper.sh
[2026-03-02 22:43:48] -rw-r--r-- 1 boinc boinc       100 Mar  2 15:35 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-02 22:43:48] -rwxr-xr-x 1 boinc boinc      7986 Mar  2 15:35 run_atlas
[2026-03-02 22:43:48] -rw-r--r-- 1 boinc boinc       105 Mar  2 15:35 job.xml
[2026-03-02 22:43:48] -rw-r--r-- 1 boinc boinc      6639 Mar  2 15:35 init_data.xml
[2026-03-02 22:43:48] -rw-r--r-- 2 boinc boinc 234210504 Mar  2 15:35 EVNT.48452672._000003.pool.root.1
[2026-03-02 22:43:48] -rw-r--r-- 2 boinc boinc     15845 Mar  2 15:35 start_atlas.sh
[2026-03-02 22:43:48] drwxrwx--x 2 boinc boinc      4096 Mar  2 15:35 shared
[2026-03-02 22:43:48] -rw-r--r-- 2 boinc boinc    597968 Mar  2 15:35 input.tar.gz
[2026-03-02 22:43:48] -rw-r--r-- 1 boinc boinc         0 Mar  2 15:35 boinc_lockfile
[2026-03-02 22:43:48] -rw-r--r-- 1 boinc boinc      2631 Mar  2 15:35 pandaJob.out
[2026-03-02 22:43:48] -rw------- 1 boinc boinc    998107 Mar  2 15:35 agis_schedconf.cvmfs.json
[2026-03-02 22:43:48] -rw------- 1 boinc boinc       447 Mar  2 15:35 workernode_map.json
[2026-03-02 22:43:48] drwx------ 5 boinc boinc      4096 Mar  2 15:36 pilot3
[2026-03-02 22:43:48] -rw------- 1 boinc boinc 232140092 Mar  2 22:42 HITS.48844171._000070.pool.root.1
[2026-03-02 22:43:48] -rw-r--r-- 1 boinc boinc       531 Mar  2 22:42 boinc_task_state.xml
[2026-03-02 22:43:48] -rw------- 1 boinc boinc      1033 Mar  2 22:43 memory_monitor_summary.json
[2026-03-02 22:43:48] -rw------- 1 boinc boinc   1512931 Mar  2 22:43 agis_ddmendpoints.agis.ALL.json
[2026-03-02 22:43:48] -rw------- 1 boinc boinc    573511 Mar  2 22:43 log.48844171._000070.job.log.tgz.1
[2026-03-02 22:43:48] -rw------- 1 boinc boinc      6386 Mar  2 22:43 heartbeat.json
[2026-03-02 22:43:48] -rw-r--r-- 1 boinc boinc      8192 Mar  2 22:43 boinc_mmap_file
[2026-03-02 22:43:48] -rw-r--r-- 1 boinc boinc        29 Mar  2 22:43 wrapper_checkpoint.txt
[2026-03-02 22:43:48] -rw------- 1 boinc boinc        95 Mar  2 22:43 pilot_heartbeat.json
[2026-03-02 22:43:48] -rw------- 1 boinc boinc      4829 Mar  2 22:43 pilotlog.txt
[2026-03-02 22:43:48] -rw------- 1 boinc boinc   3591215 Mar  2 22:43 log.48844171._000070.job.log.1
[2026-03-02 22:43:48] -rw------- 1 boinc boinc       357 Mar  2 22:43 output.list
[2026-03-02 22:43:48] -rw-r--r-- 1 boinc boinc       620 Mar  2 22:43 runtime_log
[2026-03-02 22:43:48] -rw------- 1 boinc boinc   4177920 Mar  2 22:43 result.tar.gz
[2026-03-02 22:43:48] -rw-r--r-- 1 boinc boinc      9205 Mar  2 22:43 runtime_log.err
[2026-03-02 22:43:48] -rw------- 1 boinc boinc       666 Mar  2 22:43 pWILDmzm6G9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmz6BLDmDQkGMo.diag
[2026-03-02 22:43:48] -rw-r--r-- 1 boinc boinc     21120 Mar  2 22:43 stderr.txt
[2026-03-02 22:43:48] HITS file was successfully produced:
[2026-03-02 22:43:48] -rw------- 1 boinc boinc 232140092 Mar  2 22:42 shared/HITS.pool.root.1
[2026-03-02 22:43:48]  *** Contents of shared directory: ***
[2026-03-02 22:43:48] total 460108
[2026-03-02 22:43:48] -rw-r--r-- 2 boinc boinc 234210504 Mar  2 15:35 ATLAS.root_0
[2026-03-02 22:43:48] -rw-r--r-- 2 boinc boinc     15845 Mar  2 15:35 start_atlas.sh
[2026-03-02 22:43:48] -rw-r--r-- 2 boinc boinc    597968 Mar  2 15:35 input.tar.gz
[2026-03-02 22:43:48] -rw------- 1 boinc boinc 232140092 Mar  2 22:42 HITS.pool.root.1
[2026-03-02 22:43:48] -rw------- 1 boinc boinc   4177920 Mar  2 22:43 result.tar.gz
22:43:50 (407804): run_atlas exited; CPU time 100283.061550
22:43:50 (407804): called boinc_finish(0)

</stderr_txt>
]]>

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