Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
01:19:04 (2262486): wrapper (7.7.26015): starting
01:19:04 (2262486): wrapper: running run_atlas (--nthreads 4)
[2026-03-03 01:19:04] Arguments: --nthreads 4
[2026-03-03 01:19:04] Threads: 4
[2026-03-03 01:19:04] Checking for CVMFS
[2026-03-03 01:19:04] No cvmfs_config command found, will try listing directly
[2026-03-03 01:19:04] CVMFS is ok
[2026-03-03 01:19:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-03 01:19:04] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-03 01:19:04] Further information can be found at the LHC@home message board.
[2026-03-03 01:19:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-03 01:19:04] Checking for apptainer binary...
[2026-03-03 01:19:04] which: no apptainer in ((null))
[2026-03-03 01:19:04] apptainer is not installed, using version from CVMFS
[2026-03-03 01:19:04] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-03 01:19:04] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot184/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut19.grid.cesnet.cz
[2026-03-03 01:19:04] apptainer works
[2026-03-03 01:19:04] Set ATHENA_PROC_NUMBER=4
[2026-03-03 01:19:04] Set ATHENA_CORE_NUMBER=4
[2026-03-03 01:19:04] Starting ATLAS job with PandaID=7035717405
[2026-03-03 01:19:04] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot184/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-03 02:54:31]  *** The last 200 lines of the pilot log: ***
[2026-03-03 02:54:31]  guid=ebf07c53-a33c-4e2c-8a57-01b9fc59aa56
[2026-03-03 02:54:31]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-03-03 02:54:31]  is_altstaged=None
[2026-03-03 02:54:31]  is_tar=False
[2026-03-03 02:54:31]  lfn=log.48838416._010219.job.log.tgz.1
[2026-03-03 02:54:31]  mtime=0
[2026-03-03 02:54:31]  protocol_id=None
[2026-03-03 02:54:31]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-03 02:54:31]  replicas=None
[2026-03-03 02:54:31]  scope=mc23_13p6TeV
[2026-03-03 02:54:31]  status=None
[2026-03-03 02:54:31]  status_code=0
[2026-03-03 02:54:31]  storage_token=
[2026-03-03 02:54:31]  surl=/var/lib/boinc/var/slot184/slots/0/PanDA_Pilot-7035717405/log.48838416._010219.job.log.tgz.1
[2026-03-03 02:54:31]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c9/2f/log.48838416._010219.job.log.tgz.1
[2026-03-03 02:54:31]  workdir=None
[2026-03-03 02:54:31] ]
[2026-03-03 02:54:31] 2026-03-03 01:53:47,661 | INFO     | transferring file log.48838416._010219.job.log.tgz.1 from /var/lib/boinc/var/slot184/slots/0/PanDA_Pilot-7035717405/log.48838416._010219.job.log.tgz.1 to /var/lib/
[2026-03-03 02:54:31] 2026-03-03 01:53:47,661 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot184/slots/0/PanDA_Pilot-7035717405/log.48838416._010219.job.log.tgz.1 /var/lib/boinc/var/slot184/slots/0/
[2026-03-03 02:54:31] 2026-03-03 01:53:47,678 | INFO     | adding to output.list: log.48838416._010219.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c9/2f/log.48838416._010219.job.log.tg
[2026-03-03 02:54:31] 2026-03-03 01:53:47,679 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-03 02:54:31] 2026-03-03 01:53:47,679 | INFO     | summary of transferred files:
[2026-03-03 02:54:31] 2026-03-03 01:53:47,679 | INFO     |  -- lfn=log.48838416._010219.job.log.tgz.1, status_code=0, status=transferred
[2026-03-03 02:54:31] 2026-03-03 01:53:47,679 | INFO     | stage-out finished correctly
[2026-03-03 02:54:31] 2026-03-03 01:53:48,317 | INFO     | time since job start (5672s) is within the limit (349056.0s)
[2026-03-03 02:54:31] 2026-03-03 01:53:49,102 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-03 02:54:31] 2026-03-03 01:53:50,105 | INFO     | monitor loop #412: job 0:7035717405 is in state 'finished'
[2026-03-03 02:54:31] 2026-03-03 01:53:50,105 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-03 02:54:31] 2026-03-03 01:53:50,320 | INFO     | time since job start (5674s) is within the limit (349056.0s)
[2026-03-03 02:54:31] 2026-03-03 01:53:51,446 | INFO     | job 7035717405 has state=finished
[2026-03-03 02:54:31] 2026-03-03 01:53:51,447 | INFO     | preparing for final server update for job 7035717405 in state='finished'
[2026-03-03 02:54:31] 2026-03-03 01:53:51,447 | INFO     | reading metadata from: /var/lib/boinc/var/slot184/slots/0/PanDA_Pilot-7035717405/jobReport.json
[2026-03-03 02:54:31] 2026-03-03 01:53:51,448 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot184/slots/0/workernode_map.json
[2026-03-03 02:54:31] 2026-03-03 01:53:51,448 | INFO     | this job has now completed (state=finished)
[2026-03-03 02:54:31] 2026-03-03 01:53:51,448 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-03 02:54:31] 2026-03-03 01:53:51,448 | INFO     | log transfer has been attempted: DONE
[2026-03-03 02:54:31] 2026-03-03 01:53:51,449 | INFO     | job 7035717405 has finished - writing final server update
[2026-03-03 02:54:31] 2026-03-03 01:53:51,449 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_202908/.job.ad'
[2026-03-03 02:54:31] 2026-03-03 01:53:51,449 | INFO     | total number of processed events: 400 (read)
[2026-03-03 02:54:31] 2026-03-03 01:53:51,466 | INFO     | using path: /var/lib/boinc/var/slot184/slots/0/PanDA_Pilot-7035717405/memory_monitor_summary.json (trf name=prmon)
[2026-03-03 02:54:31] 2026-03-03 01:53:51,467 | INFO     | extracted standard info from prmon json
[2026-03-03 02:54:31] 2026-03-03 01:53:51,467 | INFO     | extracted standard memory fields from prmon json
[2026-03-03 02:54:31] 2026-03-03 01:53:51,467 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-03 02:54:31] 2026-03-03 01:53:51,467 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-03 02:54:31] 2026-03-03 01:53:51,467 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-03 02:54:31] 2026-03-03 01:53:51,468 | INFO     | fitting pss+swap vs Time
[2026-03-03 02:54:31] 2026-03-03 01:53:51,468 | INFO     | sum of square deviations: 197203697.5
[2026-03-03 02:54:31] 2026-03-03 01:53:51,468 | INFO     | sum of deviations: -1478257072.5
[2026-03-03 02:54:31] 2026-03-03 01:53:51,469 | INFO     | mean x: 1772500073.5
[2026-03-03 02:54:31] 2026-03-03 01:53:51,469 | INFO     | mean y: 2371070.7558139535
[2026-03-03 02:54:31] 2026-03-03 01:53:51,469 | INFO     | intersect: 13289194811.25969
[2026-03-03 02:54:31] 2026-03-03 01:53:51,469 | INFO     | chi2: 0.0004310346572479484
[2026-03-03 02:54:31] 2026-03-03 01:53:51,469 | INFO     | current memory leak: -7.50 B/s (using 86 data points, chi2=0.00)
[2026-03-03 02:54:31] 2026-03-03 01:53:51,469 | INFO     | could have reported an average CPU frequency of 3573 MHz (7 samples)
[2026-03-03 02:54:31] 2026-03-03 01:53:51,469 | INFO     | ..............................
[2026-03-03 02:54:31] 2026-03-03 01:53:51,469 | INFO     | . Timing measurements:
[2026-03-03 02:54:31] 2026-03-03 01:53:51,469 | INFO     | . get job = 0 s
[2026-03-03 02:54:31] 2026-03-03 01:53:51,469 | INFO     | . initial setup = 5 s
[2026-03-03 02:54:31] 2026-03-03 01:53:51,469 | INFO     | . payload setup = 4 s
[2026-03-03 02:54:31] 2026-03-03 01:53:51,469 | INFO     | . stage-in = 0 s
[2026-03-03 02:54:31] 2026-03-03 01:53:51,469 | INFO     | . payload execution = 5651 s
[2026-03-03 02:54:31] 2026-03-03 01:53:51,469 | INFO     | . stage-out = 0 s
[2026-03-03 02:54:31] 2026-03-03 01:53:51,469 | INFO     | . log creation = 0 s
[2026-03-03 02:54:31] 2026-03-03 01:53:51,469 | INFO     | ..............................
[2026-03-03 02:54:31] 2026-03-03 01:53:51,516 | INFO     | 
[2026-03-03 02:54:31] 2026-03-03 01:53:51,517 | INFO     | job summary report
[2026-03-03 02:54:31] 2026-03-03 01:53:51,517 | INFO     | --------------------------------------------------
[2026-03-03 02:54:31] 2026-03-03 01:53:51,517 | INFO     | PanDA job id: 7035717405
[2026-03-03 02:54:31] 2026-03-03 01:53:51,517 | INFO     | task id: 48838416
[2026-03-03 02:54:31] 2026-03-03 01:53:51,517 | INFO     | errors: (none)
[2026-03-03 02:54:31] 2026-03-03 01:53:51,517 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-03 02:54:31] 2026-03-03 01:53:51,517 | INFO     | pilot state: finished 
[2026-03-03 02:54:31] 2026-03-03 01:53:51,517 | INFO     | transexitcode: 0
[2026-03-03 02:54:31] 2026-03-03 01:53:51,517 | INFO     | exeerrorcode: 0
[2026-03-03 02:54:31] 2026-03-03 01:53:51,517 | INFO     | exeerrordiag: 
[2026-03-03 02:54:31] 2026-03-03 01:53:51,517 | INFO     | exitcode: 0
[2026-03-03 02:54:31] 2026-03-03 01:53:51,517 | INFO     | exitmsg: OK
[2026-03-03 02:54:31] 2026-03-03 01:53:51,517 | INFO     | cpuconsumptiontime: 21790 s
[2026-03-03 02:54:31] 2026-03-03 01:53:51,517 | INFO     | nevents: 400
[2026-03-03 02:54:31] 2026-03-03 01:53:51,517 | INFO     | neventsw: 0
[2026-03-03 02:54:31] 2026-03-03 01:53:51,517 | INFO     | pid: 2274488
[2026-03-03 02:54:31] 2026-03-03 01:53:51,517 | INFO     | pgrp: 2274488
[2026-03-03 02:54:31] 2026-03-03 01:53:51,517 | INFO     | corecount: 4
[2026-03-03 02:54:31] 2026-03-03 01:53:51,517 | INFO     | event service: False
[2026-03-03 02:54:31] 2026-03-03 01:53:51,517 | INFO     | sizes: {0: 2281802, 1: 2282319, 11: 2282319, 5659: 2308989, 5660: 2318011, 5662: 2318067, 5664: 2318389}
[2026-03-03 02:54:31] 2026-03-03 01:53:51,517 | INFO     | --------------------------------------------------
[2026-03-03 02:54:31] 2026-03-03 01:53:51,517 | INFO     | 
[2026-03-03 02:54:31] 2026-03-03 01:53:51,517 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot184/slots/0
[2026-03-03 02:54:31] 2026-03-03 01:53:51,533 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-03 02:54:31] 2026-03-03 01:53:51,533 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-03 02:54:31] 2026-03-03 01:53:51,533 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-03 02:54:31] 2026-03-03 01:53:51,533 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-03 02:54:31] 2026-03-03 01:53:51,533 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-03 02:54:31] 2026-03-03 01:53:51,533 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-03 02:54:31] 2026-03-03 01:53:51,533 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-03 02:54:31] 2026-03-03 01:53:51,533 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-03 02:54:31] 2026-03-03 01:53:51,533 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-03 02:54:31] 2026-03-03 01:53:51,533 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-03 02:54:31] 2026-03-03 01:53:51,533 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-03 02:54:31] 2026-03-03 01:53:51,534 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-03 02:54:31] 2026-03-03 01:53:51,534 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-03 02:54:31] 2026-03-03 01:53:51,534 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-03 02:54:31] 2026-03-03 01:53:51,534 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-03 02:54:31] 2026-03-03 01:53:51,534 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-03 02:54:31] 2026-03-03 01:53:51,534 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-03 02:54:31] 2026-03-03 01:53:51,534 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-03 02:54:31] 2026-03-03 01:53:51,534 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-03 02:54:31] 2026-03-03 01:53:51,534 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-03 02:54:31] 2026-03-03 01:53:51,534 | INFO     | job 7035717405 has completed (purged errors)
[2026-03-03 02:54:31] 2026-03-03 01:53:51,534 | INFO     | overall cleanup function is called
[2026-03-03 02:54:31] 2026-03-03 01:53:52,541 | INFO     | --- collectZombieJob: --- 10, [2274488]
[2026-03-03 02:54:31] 2026-03-03 01:53:52,541 | INFO     | zombie collector waiting for pid 2274488
[2026-03-03 02:54:31] 2026-03-03 01:53:52,541 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-03 02:54:31] 2026-03-03 01:53:52,541 | INFO     | collected zombie processes
[2026-03-03 02:54:31] 2026-03-03 01:53:52,541 | INFO     | will attempt to kill all subprocesses of pid=2274488
[2026-03-03 02:54:31] 2026-03-03 01:53:52,953 | INFO     | process IDs to be killed: [2274488] (in reverse order)
[2026-03-03 02:54:31] 2026-03-03 01:53:53,151 | WARNING  | found no corresponding commands to process id(s)
[2026-03-03 02:54:31] 2026-03-03 01:53:53,151 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-03 02:54:31] 2026-03-03 01:53:53,176 | INFO     | did not find any defunct processes belonging to 2274488
[2026-03-03 02:54:31] 2026-03-03 01:53:53,198 | INFO     | did not find any defunct processes belonging to 2274488
[2026-03-03 02:54:31] 2026-03-03 01:53:53,198 | INFO     | ready for new job
[2026-03-03 02:54:31] 2026-03-03 01:53:53,198 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-03 02:54:31] 2026-03-03 01:53:53,199 | INFO     | **************************************
[2026-03-03 02:54:31] 2026-03-03 01:53:53,199 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-03 02:54:31] 2026-03-03 01:53:53,199 | INFO     | **************************************
[2026-03-03 02:54:31] 2026-03-03 01:53:53,199 | INFO     | 
[2026-03-03 02:54:31] 2026-03-03 01:53:53,204 | INFO     | architecture information:
[2026-03-03 02:54:31] 2026-03-03 01:53:53,204 | INFO     | executing command: cat /etc/os-release
[2026-03-03 02:54:31] 2026-03-03 01:53:53,220 | INFO     | cat /etc/os-release:
[2026-03-03 02:54:31] NAME="CentOS Linux"
[2026-03-03 02:54:31] VERSION="7 (Core)"
[2026-03-03 02:54:31] ID="centos"
[2026-03-03 02:54:31] ID_LIKE="rhel fedora"
[2026-03-03 02:54:31] VERSION_ID="7"
[2026-03-03 02:54:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-03 02:54:31] ANSI_COLOR="0;31"
[2026-03-03 02:54:31] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-03 02:54:31] HOME_URL="https://www.centos.org/"
[2026-03-03 02:54:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-03 02:54:31] 
[2026-03-03 02:54:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-03 02:54:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-03 02:54:31] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-03 02:54:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-03 02:54:31] 
[2026-03-03 02:54:31] 2026-03-03 01:53:53,220 | INFO     | **************************************
[2026-03-03 02:54:31] 2026-03-03 01:53:53,722 | INFO     | executing command: df -mP /var/lib/boinc/var/slot184/slots/0
[2026-03-03 02:54:31] 2026-03-03 01:53:53,743 | INFO     | sufficient remaining disk space (22112370688 B)
[2026-03-03 02:54:31] 2026-03-03 01:53:53,747 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-03 02:54:31] 2026-03-03 01:53:53,747 | INFO     | current server update state: UPDATING_FINAL
[2026-03-03 02:54:31] 2026-03-03 01:53:53,747 | INFO     | update_server=False
[2026-03-03 02:54:31] 2026-03-03 01:53:53,747 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-03 02:54:31] 2026-03-03 01:53:53,747 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-03 02:54:31] 2026-03-03 01:53:53,747 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-03 02:54:31] 2026-03-03 01:53:53,747 | INFO     | aborting loop
[2026-03-03 02:54:31] 2026-03-03 01:53:54,024 | INFO     | all payload control threads have been joined
[2026-03-03 02:54:31] 2026-03-03 01:53:54,748 | INFO     | [job] retrieve thread has finished
[2026-03-03 02:54:31] 2026-03-03 01:53:54,752 | INFO     | [job] job monitor thread has finished
[2026-03-03 02:54:31] 2026-03-03 01:53:54,834 | INFO     | all data control threads have been joined
[2026-03-03 02:54:31] 2026-03-03 01:53:54,863 | INFO     | [payload] failed_post thread has finished
[2026-03-03 02:54:31] 2026-03-03 01:53:55,026 | INFO     | [payload] control thread has finished
[2026-03-03 02:54:31] 2026-03-03 01:53:55,155 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-03 02:54:31] 2026-03-03 01:53:55,160 | INFO     | [job] validate thread has finished
[2026-03-03 02:54:31] 2026-03-03 01:53:55,235 | INFO     | [payload] execute_payloads thread has finished
[2026-03-03 02:54:31] 2026-03-03 01:53:55,276 | INFO     | [job] create_data_payload thread has finished
[2026-03-03 02:54:31] 2026-03-03 01:53:55,338 | INFO     | [payload] validate_pre thread has finished
[2026-03-03 02:54:31] 2026-03-03 01:53:55,367 | INFO     | all job control threads have been joined
[2026-03-03 02:54:31] 2026-03-03 01:53:55,602 | INFO     | [data] copytool_in thread has finished
[2026-03-03 02:54:31] 2026-03-03 01:53:55,753 | INFO     | [data] copytool_out thread has finished
[2026-03-03 02:54:31] 2026-03-03 01:53:55,794 | INFO     | [payload] validate_post thread has finished
[2026-03-03 02:54:31] 2026-03-03 01:53:55,836 | INFO     | [data] control thread has finished
[2026-03-03 02:54:31] 2026-03-03 01:53:56,372 | INFO     | [job] control thread has finished
[2026-03-03 02:54:31] 2026-03-03 01:53:56,525 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-03 02:54:31] 2026-03-03 01:53:57,530 | INFO     | [job] queue monitor thread has finished
[2026-03-03 02:54:31] 2026-03-03 01:53:59,161 | INFO     | [data] queue_monitor thread has finished
[2026-03-03 02:54:31] 2026-03-03 01:54:04,096 | INFO     | job.realtimelogging is not enabled
[2026-03-03 02:54:31] 2026-03-03 01:54:05,097 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-03 02:54:31] 2026-03-03 01:54:23,889 | INFO     | PID=2268712 has CPU usage=5.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-03 02:54:31] 2026-03-03 01:54:23,889 | INFO     | .. there are 46 such processes running
[2026-03-03 02:54:31] 2026-03-03 01:54:23,890 | INFO     | found 0 job(s) in 20 queues
[2026-03-03 02:54:31] 2026-03-03 01:54:23,890 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-03 02:54:31] 2026-03-03 01:54:23,890 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-03 02:54:31] 2026-03-03 01:54:25,316 | INFO     | [monitor] cgroup control has ended
[2026-03-03 02:54:31] 2026-03-03 01:54:25,734 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22587457140544)>', '<ExcThread(monitor, started 22587219654400)>']
[2026-03-03 02:54:31] 2026-03-03 01:54:25,900 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-03 02:54:31] 2026-03-03 01:54:25,900 | INFO     | [monitor] control thread has ended
[2026-03-03 02:54:31] 2026-03-03 01:54:30,759 | INFO     | all workflow threads have been joined
[2026-03-03 02:54:31] 2026-03-03 01:54:30,759 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-03 02:54:31] 2026-03-03 01:54:30,759 | INFO     | traces error code: 0
[2026-03-03 02:54:31] 2026-03-03 01:54:30,759 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-03 02:54:31] 2026-03-03 01:54:30,908 [wrapper] ==== pilot stdout END ====
[2026-03-03 02:54:31] 2026-03-03 01:54:30,909 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-03 02:54:31] 2026-03-03 01:54:30,911 [wrapper] pilotpid: 2268712
[2026-03-03 02:54:31] 2026-03-03 01:54:30,913 [wrapper] Pilot exit status: 0
[2026-03-03 02:54:31] 2026-03-03 01:54:30,918 [wrapper] pandaids: 7035717405
[2026-03-03 02:54:31] 2026-03-03 01:54:31,028 [wrapper] cleanup supervisor_pilot 3003692 2268713
[2026-03-03 02:54:31] 2026-03-03 01:54:31,030 [wrapper] Test setup, not cleaning
[2026-03-03 02:54:31] 2026-03-03 01:54:31,031 [wrapper] apfmon messages muted
[2026-03-03 02:54:31] 2026-03-03 01:54:31,033 [wrapper] ==== wrapper stdout END ====
[2026-03-03 02:54:31] 2026-03-03 01:54:31,034 [wrapper] ==== wrapper stderr END ====
[2026-03-03 02:54:31]  *** Error codes and diagnostics ***
[2026-03-03 02:54:31]     "exeErrorCode": 0,
[2026-03-03 02:54:31]     "exeErrorDiag": "",
[2026-03-03 02:54:31]     "pilotErrorCode": 0,
[2026-03-03 02:54:31]     "pilotErrorDiag": "",
[2026-03-03 02:54:31]  *** Listing of results directory ***
[2026-03-03 02:54:31] total 514536
[2026-03-03 02:54:31] -rw-r--r--. 1 boinc boinc    584627 Mar  2 01:56 pilot3.tar.gz
[2026-03-03 02:54:31] -rw-r--r--. 1 boinc boinc      5111 Mar  2 01:57 queuedata.json
[2026-03-03 02:54:31] -rwx------. 1 boinc boinc     36322 Mar  2 01:58 runpilot2-wrapper.sh
[2026-03-03 02:54:31] -rw-r--r--. 1 boinc boinc       100 Mar  3 01:18 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-03 02:54:31] -rwxr-xr-x. 1 boinc boinc      7986 Mar  3 01:18 run_atlas
[2026-03-03 02:54:31] -rw-r--r--. 1 boinc boinc       105 Mar  3 01:18 job.xml
[2026-03-03 02:54:31] -rw-r--r--. 2 boinc boinc 293741241 Mar  3 01:19 EVNT.48220085._000398.pool.root.1
[2026-03-03 02:54:31] -rw-r--r--. 2 boinc boinc     15845 Mar  3 01:19 start_atlas.sh
[2026-03-03 02:54:31] drwxrwx--x. 2 boinc boinc      4096 Mar  3 01:19 shared
[2026-03-03 02:54:31] -rw-r--r--. 2 boinc boinc    597955 Mar  3 01:19 input.tar.gz
[2026-03-03 02:54:31] -rw-r--r--. 1 boinc boinc      6706 Mar  3 01:19 init_data.xml
[2026-03-03 02:54:31] -rw-r--r--. 1 boinc boinc         0 Mar  3 01:19 boinc_lockfile
[2026-03-03 02:54:31] -rw-r--r--. 1 boinc boinc      2567 Mar  3 01:19 pandaJob.out
[2026-03-03 02:54:31] -rw-------. 1 boinc boinc    997714 Mar  3 01:19 agis_schedconf.cvmfs.json
[2026-03-03 02:54:31] -rw-------. 1 boinc boinc   1512931 Mar  3 01:19 agis_ddmendpoints.agis.ALL.json
[2026-03-03 02:54:31] -rw-------. 1 boinc boinc       445 Mar  3 01:19 workernode_map.json
[2026-03-03 02:54:31] drwx------. 5 boinc boinc      4096 Mar  3 01:19 pilot3
[2026-03-03 02:54:31] -rw-------. 1 boinc boinc 226973337 Mar  3 02:53 HITS.48838416._010219.pool.root.1
[2026-03-03 02:54:31] -rw-r--r--. 1 boinc boinc       529 Mar  3 02:53 boinc_task_state.xml
[2026-03-03 02:54:31] -rw-------. 1 boinc boinc      1028 Mar  3 02:53 memory_monitor_summary.json
[2026-03-03 02:54:31] -rw-------. 1 boinc boinc    291407 Mar  3 02:53 log.48838416._010219.job.log.tgz.1
[2026-03-03 02:54:31] -rw-------. 1 boinc boinc      6353 Mar  3 02:53 heartbeat.json
[2026-03-03 02:54:31] -rw-r--r--. 1 boinc boinc      8192 Mar  3 02:54 boinc_mmap_file
[2026-03-03 02:54:31] -rw-r--r--. 1 boinc boinc        27 Mar  3 02:54 wrapper_checkpoint.txt
[2026-03-03 02:54:31] -rw-------. 1 boinc boinc        95 Mar  3 02:54 pilot_heartbeat.json
[2026-03-03 02:54:31] -rw-------. 1 boinc boinc      4902 Mar  3 02:54 pilotlog.txt
[2026-03-03 02:54:31] -rw-------. 1 boinc boinc    825651 Mar  3 02:54 log.48838416._010219.job.log.1
[2026-03-03 02:54:31] -rw-------. 1 boinc boinc       357 Mar  3 02:54 output.list
[2026-03-03 02:54:31] -rw-r--r--. 1 boinc boinc       620 Mar  3 02:54 runtime_log
[2026-03-03 02:54:31] -rw-------. 1 boinc boinc   1136640 Mar  3 02:54 result.tar.gz
[2026-03-03 02:54:31] -rw-------. 1 boinc boinc       661 Mar  3 02:54 yhzKDmym6G9n9Rq4apOajLDm4fhM0noT9bVooX4SDm399KDmpQCl8m.diag
[2026-03-03 02:54:31] -rw-r--r--. 1 boinc boinc      9221 Mar  3 02:54 runtime_log.err
[2026-03-03 02:54:31] -rw-r--r--. 1 boinc boinc     21246 Mar  3 02:54 stderr.txt
[2026-03-03 02:54:31] HITS file was successfully produced:
[2026-03-03 02:54:31] -rw-------. 1 boinc boinc 226973337 Mar  3 02:53 shared/HITS.pool.root.1
[2026-03-03 02:54:31]  *** Contents of shared directory: ***
[2026-03-03 02:54:31] total 510236
[2026-03-03 02:54:31] -rw-r--r--. 2 boinc boinc 293741241 Mar  3 01:19 ATLAS.root_0
[2026-03-03 02:54:31] -rw-r--r--. 2 boinc boinc     15845 Mar  3 01:19 start_atlas.sh
[2026-03-03 02:54:31] -rw-r--r--. 2 boinc boinc    597955 Mar  3 01:19 input.tar.gz
[2026-03-03 02:54:31] -rw-------. 1 boinc boinc 226973337 Mar  3 02:53 HITS.pool.root.1
[2026-03-03 02:54:31] -rw-------. 1 boinc boinc   1136640 Mar  3 02:54 result.tar.gz
02:54:32 (2262486): run_atlas exited; CPU time 22045.204387
02:54:32 (2262486): called boinc_finish(0)

</stderr_txt>
]]>

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