Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
19:59:21 (163153): wrapper (7.7.26015): starting
19:59:21 (163153): wrapper: running run_atlas (--nthreads 12)
[2026-03-01 19:59:21] Arguments: --nthreads 12
[2026-03-01 19:59:21] Threads: 12
[2026-03-01 19:59:21] Checking for CVMFS
[2026-03-01 19:59:21] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-01 19:59:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-01 19:59:22] Running cvmfs_config stat atlas.cern.ch
[2026-03-01 19:59:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-01 19:59:23] 2.11.5.0 3233586 66458 244312 156793 2 295 29280359 45568001 21874 130560 0 689234684 99.838 362466023 21724 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.164:3129 1
[2026-03-01 19:59:23] CVMFS is ok
[2026-03-01 19:59:23] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-01 19:59:23] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-01 19:59:23] Further information can be found at the LHC@home message board.
[2026-03-01 19:59:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-01 19:59:23] Checking for apptainer binary...
[2026-03-01 19:59:23] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-01 19:59:23] Running /usr/bin/apptainer --version
[2026-03-01 19:59:23] apptainer version 1.4.1-1.el9
[2026-03-01 19:59:23] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-01 19:59:24] wns0038.triumf.lcg
[2026-03-01 19:59:24] apptainer works
[2026-03-01 19:59:24] Set ATHENA_PROC_NUMBER=12
[2026-03-01 19:59:24] Set ATHENA_CORE_NUMBER=12
[2026-03-01 19:59:24] Starting ATLAS job with PandaID=7035726645
[2026-03-01 19:59:24] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-01 20:04:13]  *** The last 200 lines of the pilot log: ***
[2026-03-01 20:04:13] 2026-03-02 04:03:32,055 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-01 20:04:13] 2026-03-02 04:03:32,055 | WARNING  | wrong length of table data, x=[1772424059.0], y=[857.0] (must be same and length>=4)
[2026-03-01 20:04:13] 2026-03-02 04:03:32,055 | INFO     | could have reported an average CPU frequency of 2684 MHz (4 samples)
[2026-03-01 20:04:13] 2026-03-02 04:03:32,055 | INFO     | ..............................
[2026-03-01 20:04:13] 2026-03-02 04:03:32,055 | INFO     | . Timing measurements:
[2026-03-01 20:04:13] 2026-03-02 04:03:32,055 | INFO     | . get job = 0 s
[2026-03-01 20:04:13] 2026-03-02 04:03:32,055 | INFO     | . initial setup = 18 s
[2026-03-01 20:04:13] 2026-03-02 04:03:32,055 | INFO     | . payload setup = 22 s
[2026-03-01 20:04:13] 2026-03-02 04:03:32,055 | INFO     | . stage-in = 0 s
[2026-03-01 20:04:13] 2026-03-02 04:03:32,055 | INFO     | . payload execution = 47 s
[2026-03-01 20:04:13] 2026-03-02 04:03:32,055 | INFO     | . stage-out = 1 s
[2026-03-01 20:04:13] 2026-03-02 04:03:32,056 | INFO     | . log creation = 0 s
[2026-03-01 20:04:13] 2026-03-02 04:03:32,056 | INFO     | ..............................
[2026-03-01 20:04:13] 2026-03-02 04:03:32,056 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-03-01 20:04:13] 2026-03-02 04:03:32,056 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7035726645/pilotlog.txt
[2026-03-01 20:04:13] 2026-03-02 04:03:32,179 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-03-01 20:04:13] - Log from pilotlog.txt -
[2026-03-01 20:04:13] 2026-03-02 04:03:32,054 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-7035726645/memory_monitor_summary.json (trf name=prmon)
[2026-03-01 20:04:13] 2026-03-02 04:03:32,054 | INFO     | extracted standard info from prmon json
[2026-03-01 20:04:13] 2026-03-02 04:03:32,054 | INFO     | extracted standard memory fields from prmon json
[2026-03-01 20:04:13] 2026-03-02 04:03:32,054 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-01 20:04:13] 2026-03-02 04:03:32,054 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-01 20:04:13] 2026-03-02 04:03:32,055 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-01 20:04:13] 2026-03-02 04:03:32,055 | WARNING  | wrong length of table data, x=[1772424059.0], y=[857.0] (must be same and length>=4)
[2026-03-01 20:04:13] 2026-03-02 04:03:32,055 | INFO     | could have reported an average CPU frequency of 2684 MHz (4 samples)
[2026-03-01 20:04:13] 2026-03-02 04:03:32,055 | INFO     | ..............................
[2026-03-01 20:04:13] 2026-03-02 04:03:32,055 | INFO     | . Timing measurements:
[2026-03-01 20:04:13] 2026-03-02 04:03:32,055 | INFO     | . get job = 0 s
[2026-03-01 20:04:13] 2026-03-02 04:03:32,055 | INFO     | . initial setup = 18 s
[2026-03-01 20:04:13] 2026-03-02 04:03:32,055 | INFO     | . payload setup = 22 s
[2026-03-01 20:04:13] 2026-03-02 04:03:32,055 | INFO     | . stage-in = 0 s
[2026-03-01 20:04:13] 2026-03-02 04:03:32,055 | INFO     | . payload execution = 47 s
[2026-03-01 20:04:13] 2026-03-02 04:03:32,055 | INFO     | . stage-out = 1 s
[2026-03-01 20:04:13] 2026-03-02 04:03:32,056 | INFO     | . log creation = 0 s
[2026-03-01 20:04:13] 2026-03-02 04:03:32,056 | INFO     | ..............................
[2026-03-01 20:04:13] 2026-03-02 04:03:32,056 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-03-01 20:04:13] 2026-03-02 04:03:32,056 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7035726645/pilotlog.txt
[2026-03-01 20:04:13] 2026-03-02 04:03:32,180 | WARNING  | 
[2026-03-01 20:04:13] [begin log extracts]
[2026-03-01 20:04:13] - Log from pilotlog.txt -
[2026-03-01 20:04:13] 2026-03-02 04:03:32,054 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-7035726645/memory_monitor_summary.json (trf name=prmon)
[2026-03-01 20:04:13] 2026-03-02 04:03:32,054 | INFO     | extracted standard info from prmon json
[2026-03-01 20:04:13] 2026-03-02 04:03:32,054 | INFO     | extracted standard memory fields from prmon json
[2026-03-01 20:04:13] 2026-03-02 04:03:32,054 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-01 20:04:13] 2026-03-02 04:03:32,054 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-01 20:04:13] 2026-03-02 04:03:32,055 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-01 20:04:13] 2026-03-02 04:03:32,055 | WARNING  | wrong length of table data, x=[1772424059.0], y=[857.0] (must be same and length>=4)
[2026-03-01 20:04:13] 2026-03-02 04:03:32,055 | INFO     | could have reported an average CPU frequency of 2684 MHz (4 samples)
[2026-03-01 20:04:13] 2026-03-02 04:03:32,055 | INFO     | ..............................
[2026-03-01 20:04:13] 2026-03-02 04:03:32,055 | INFO     | . Timing measurements:
[2026-03-01 20:04:13] 2026-03-02 04:03:32,055 | INFO     | . get job = 0 s
[2026-03-01 20:04:13] 2026-03-02 04:03:32,055 | INFO     | . initial setup = 18 s
[2026-03-01 20:04:13] 2026-03-02 04:03:32,055 | INFO     | . payload setup = 22 s
[2026-03-01 20:04:13] 2026-03-02 04:03:32,055 | INFO     | . stage-in = 0 s
[2026-03-01 20:04:13] 2026-03-02 04:03:32,055 | INFO     | . payload execution = 47 s
[2026-03-01 20:04:13] 2026-03-02 04:03:32,055 | INFO     | . stage-out = 1 s
[2026-03-01 20:04:13] 2026-03-02 04:03:32,056 | INFO     | . log creation = 0 s
[2026-03-01 20:04:13] 2026-03-02 04:03:32,056 | INFO     | ..............................
[2026-03-01 20:04:13] 2026-03-02 04:03:32,056 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-03-01 20:04:13] 2026-03-02 04:03:32,056 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7035726645/pilotlog.txt
[2026-03-01 20:04:13] [end log extracts]
[2026-03-01 20:04:13] 2026-03-02 04:03:32,180 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2026-03-01 20:04:13] 2026-03-02 04:03:32,180 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2026-03-01 20:04:13] 2026-03-02 04:03:32,539 | INFO     | PID=168238 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-01 20:04:13] 2026-03-02 04:03:32,539 | INFO     | .. there are 34 such processes running
[2026-03-01 20:04:13] 2026-03-02 04:03:32,985 | INFO     | 
[2026-03-01 20:04:13] 2026-03-02 04:03:32,985 | INFO     | job summary report
[2026-03-01 20:04:13] 2026-03-02 04:03:32,985 | INFO     | --------------------------------------------------
[2026-03-01 20:04:13] 2026-03-02 04:03:32,985 | INFO     | PanDA job id: 7035726645
[2026-03-01 20:04:13] 2026-03-02 04:03:32,985 | INFO     | task id: 48700858
[2026-03-01 20:04:13] 2026-03-02 04:03:32,985 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-03-01 20:01:24,418 CRITICAL Transform executor raised TransformValidationExceptio
[2026-03-01 20:04:13] 2026-03-02 04:03:32,985 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-01 20:04:13] 2026-03-02 04:03:32,985 | INFO     | pilot state: failed 
[2026-03-01 20:04:13] 2026-03-02 04:03:32,985 | INFO     | transexitcode: 65
[2026-03-01 20:04:13] 2026-03-02 04:03:32,985 | INFO     | exeerrorcode: 65
[2026-03-01 20:04:13] 2026-03-02 04:03:32,986 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2026-03-01 20:04:13] 2026-03-02 04:03:32,986 | INFO     | exitcode: 65
[2026-03-01 20:04:13] 2026-03-02 04:03:32,986 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2026-03-01 20:04:13] 2026-03-02 04:03:32,986 | INFO     | cpuconsumptiontime: 14 s
[2026-03-01 20:04:13] 2026-03-02 04:03:32,986 | INFO     | nevents: 0
[2026-03-01 20:04:13] 2026-03-02 04:03:32,986 | INFO     | neventsw: 0
[2026-03-01 20:04:13] 2026-03-02 04:03:32,986 | INFO     | pid: 179040
[2026-03-01 20:04:13] 2026-03-02 04:03:32,986 | INFO     | pgrp: 179040
[2026-03-01 20:04:13] 2026-03-02 04:03:32,986 | INFO     | corecount: 12
[2026-03-01 20:04:13] 2026-03-02 04:03:32,986 | INFO     | event service: False
[2026-03-01 20:04:13] 2026-03-02 04:03:32,986 | INFO     | sizes: {0: 2281729, 1: 2281729, 2: 2282190, 13: 2282190, 73: 2305415, 75: 2309863, 191: 2310001}
[2026-03-01 20:04:13] 2026-03-02 04:03:32,986 | INFO     | --------------------------------------------------
[2026-03-01 20:04:13] 2026-03-02 04:03:32,986 | INFO     | 
[2026-03-01 20:04:13] 2026-03-02 04:03:32,986 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2026-03-01 20:04:13] 2026-03-02 04:03:32,999 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-01 20:04:13] 2026-03-02 04:03:33,000 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-01 20:04:13] 2026-03-02 04:03:33,000 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-01 20:04:13] 2026-03-02 04:03:33,000 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-01 20:04:13] 2026-03-02 04:03:33,000 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-01 20:04:13] 2026-03-02 04:03:33,000 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-01 20:04:13] 2026-03-02 04:03:33,000 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-01 20:04:13] 2026-03-02 04:03:33,000 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-01 20:04:13] 2026-03-02 04:03:33,000 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-01 20:04:13] 2026-03-02 04:03:33,000 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-01 20:04:13] 2026-03-02 04:03:33,000 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-01 20:04:13] 2026-03-02 04:03:33,000 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-01 20:04:13] 2026-03-02 04:03:33,000 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-01 20:04:13] 2026-03-02 04:03:33,000 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-01 20:04:13] 2026-03-02 04:03:33,000 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-01 20:04:13] 2026-03-02 04:03:33,000 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-01 20:04:13] 2026-03-02 04:03:33,000 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-01 20:04:13] 2026-03-02 04:03:33,000 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-01 20:04:13] 2026-03-02 04:03:33,001 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-01 20:04:13] 2026-03-02 04:03:33,001 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-01 20:04:13] 2026-03-02 04:03:33,001 | INFO     | job 7035726645 has completed (purged errors)
[2026-03-01 20:04:13] 2026-03-02 04:03:33,001 | INFO     | overall cleanup function is called
[2026-03-01 20:04:13] 2026-03-02 04:03:34,007 | INFO     | --- collectZombieJob: --- 10, [179040]
[2026-03-01 20:04:13] 2026-03-02 04:03:34,007 | INFO     | zombie collector waiting for pid 179040
[2026-03-01 20:04:13] 2026-03-02 04:03:34,007 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-01 20:04:13] 2026-03-02 04:03:34,007 | INFO     | collected zombie processes
[2026-03-01 20:04:13] 2026-03-02 04:03:34,007 | INFO     | will attempt to kill all subprocesses of pid=179040
[2026-03-01 20:04:13] 2026-03-02 04:03:34,374 | INFO     | process IDs to be killed: [179040] (in reverse order)
[2026-03-01 20:04:13] 2026-03-02 04:03:34,991 | WARNING  | found no corresponding commands to process id(s)
[2026-03-01 20:04:13] 2026-03-02 04:03:34,992 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-01 20:04:13] 2026-03-02 04:03:35,000 | INFO     | did not find any defunct processes belonging to 179040
[2026-03-01 20:04:13] 2026-03-02 04:03:35,007 | INFO     | did not find any defunct processes belonging to 179040
[2026-03-01 20:04:13] 2026-03-02 04:03:35,007 | INFO     | ready for new job
[2026-03-01 20:04:13] 2026-03-02 04:03:35,008 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-01 20:04:13] 2026-03-02 04:03:35,009 | INFO     | **************************************
[2026-03-01 20:04:13] 2026-03-02 04:03:35,009 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-01 20:04:13] 2026-03-02 04:03:35,009 | INFO     | **************************************
[2026-03-01 20:04:13] 2026-03-02 04:03:35,009 | INFO     | 
[2026-03-01 20:04:13] 2026-03-02 04:03:35,011 | INFO     | architecture information:
[2026-03-01 20:04:13] 2026-03-02 04:03:35,011 | INFO     | executing command: cat /etc/os-release
[2026-03-01 20:04:13] 2026-03-02 04:03:35,024 | INFO     | cat /etc/os-release:
[2026-03-01 20:04:13] NAME="CentOS Linux"
[2026-03-01 20:04:13] VERSION="7 (Core)"
[2026-03-01 20:04:13] ID="centos"
[2026-03-01 20:04:13] ID_LIKE="rhel fedora"
[2026-03-01 20:04:13] VERSION_ID="7"
[2026-03-01 20:04:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-01 20:04:13] ANSI_COLOR="0;31"
[2026-03-01 20:04:13] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-01 20:04:13] HOME_URL="https://www.centos.org/"
[2026-03-01 20:04:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-01 20:04:13] 
[2026-03-01 20:04:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-01 20:04:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-01 20:04:13] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-01 20:04:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-01 20:04:13] 
[2026-03-01 20:04:13] 2026-03-02 04:03:35,024 | INFO     | **************************************
[2026-03-01 20:04:13] 2026-03-02 04:03:35,529 | INFO     | executing command: df -mP /home/boinc/slots/0
[2026-03-01 20:04:13] 2026-03-02 04:03:35,555 | INFO     | sufficient remaining disk space (1985707245568 B)
[2026-03-01 20:04:13] 2026-03-02 04:03:35,556 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-01 20:04:13] 2026-03-02 04:03:35,556 | INFO     | current server update state: UPDATING_FINAL
[2026-03-01 20:04:13] 2026-03-02 04:03:35,556 | INFO     | update_server=False
[2026-03-01 20:04:13] 2026-03-02 04:03:35,556 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-01 20:04:13] 2026-03-02 04:03:35,557 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-01 20:04:13] 2026-03-02 04:03:35,557 | INFO     | aborting loop
[2026-03-01 20:04:13] 2026-03-02 04:03:35,561 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-01 20:04:13] 2026-03-02 04:03:35,688 | INFO     | all data control threads have been joined
[2026-03-01 20:04:13] 2026-03-02 04:03:35,734 | INFO     | all payload control threads have been joined
[2026-03-01 20:04:13] 2026-03-02 04:03:36,527 | INFO     | all job control threads have been joined
[2026-03-01 20:04:13] 2026-03-02 04:03:36,558 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-01 20:04:13] 2026-03-02 04:03:36,563 | INFO     | [job] job monitor thread has finished
[2026-03-01 20:04:13] 2026-03-02 04:03:36,570 | INFO     | [job] retrieve thread has finished
[2026-03-01 20:04:13] 2026-03-02 04:03:36,694 | INFO     | [data] control thread has finished
[2026-03-01 20:04:13] 2026-03-02 04:03:36,740 | INFO     | [payload] control thread has finished
[2026-03-01 20:04:13] 2026-03-02 04:03:37,055 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-01 20:04:13] 2026-03-02 04:03:37,321 | INFO     | [job] validate thread has finished
[2026-03-01 20:04:13] 2026-03-02 04:03:37,499 | INFO     | [payload] validate_pre thread has finished
[2026-03-01 20:04:13] 2026-03-02 04:03:37,501 | INFO     | [payload] execute_payloads thread has finished
[2026-03-01 20:04:13] 2026-03-02 04:03:37,517 | INFO     | [payload] failed_post thread has finished
[2026-03-01 20:04:13] 2026-03-02 04:03:37,533 | INFO     | [job] control thread has finished
[2026-03-01 20:04:13] 2026-03-02 04:03:37,541 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-01 20:04:13] 2026-03-02 04:03:37,603 | INFO     | [job] create_data_payload thread has finished
[2026-03-01 20:04:13] 2026-03-02 04:03:37,648 | INFO     | [data] copytool_in thread has finished
[2026-03-01 20:04:13] 2026-03-02 04:03:37,681 | INFO     | [payload] validate_post thread has finished
[2026-03-01 20:04:13] 2026-03-02 04:03:38,547 | INFO     | [job] queue monitor thread has finished
[2026-03-01 20:04:13] 2026-03-02 04:03:38,565 | INFO     | [data] copytool_out thread has finished
[2026-03-01 20:04:13] 2026-03-02 04:03:39,570 | INFO     | [data] queue_monitor thread has finished
[2026-03-01 20:04:13] 2026-03-02 04:04:05,174 | INFO     | PID=168238 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-01 20:04:13] 2026-03-02 04:04:05,175 | INFO     | .. there are 34 such processes running
[2026-03-01 20:04:13] 2026-03-02 04:04:05,175 | INFO     | found 0 job(s) in 20 queues
[2026-03-01 20:04:13] 2026-03-02 04:04:05,175 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-01 20:04:13] 2026-03-02 04:04:05,175 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-01 20:04:13] 2026-03-02 04:04:07,630 | INFO     | [monitor] cgroup control has ended
[2026-03-01 20:04:13] 2026-03-02 04:04:07,733 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140234823169856)>', '<ExcThread(monitor, started 140234272519936)>']
[2026-03-01 20:04:13] 2026-03-02 04:04:08,197 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-01 20:04:13] 2026-03-02 04:04:08,197 | INFO     | [monitor] control thread has ended
[2026-03-01 20:04:13] 2026-03-02 04:04:12,759 | INFO     | all workflow threads have been joined
[2026-03-01 20:04:13] 2026-03-02 04:04:12,759 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-01 20:04:13] 2026-03-02 04:04:12,759 | INFO     | traces error code: 0
[2026-03-01 20:04:13] 2026-03-02 04:04:12,759 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-01 20:04:13] 2026-03-02 04:04:13,206 [wrapper] ==== pilot stdout END ====
[2026-03-01 20:04:13] 2026-03-02 04:04:13,233 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-01 20:04:13] 2026-03-02 04:04:13,236 [wrapper] pilotpid: 168238
[2026-03-01 20:04:13] 2026-03-02 04:04:13,238 [wrapper] Pilot exit status: 0
[2026-03-01 20:04:13] 2026-03-02 04:04:13,256 [wrapper] pandaids: 7035726645
[2026-03-01 20:04:13] 2026-03-02 04:04:13,305 [wrapper] cleanup supervisor_pilot  168252 168239
[2026-03-01 20:04:13] 2026-03-02 04:04:13,308 [wrapper] Test setup, not cleaning
[2026-03-01 20:04:13] 2026-03-02 04:04:13,310 [wrapper] apfmon messages muted
[2026-03-01 20:04:13] 2026-03-02 04:04:13,311 [wrapper] ==== wrapper stdout END ====
[2026-03-01 20:04:13] 2026-03-02 04:04:13,313 [wrapper] ==== wrapper stderr END ====
[2026-03-01 20:04:13]  *** Error codes and diagnostics ***
[2026-03-01 20:04:13]     "exeErrorCode": 65,
[2026-03-01 20:04:13]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2026-03-01 20:04:13]     "pilotErrorCode": 1305,
[2026-03-01 20:04:13]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2026-03-01 20:04:13]  *** Listing of results directory ***
[2026-03-01 20:04:13] total 189336
[2026-03-01 20:04:13] -rw-r--r--. 1 boinc boinc    584627 Mar  1 16:56 pilot3.tar.gz
[2026-03-01 20:04:13] -rwx------. 1 boinc boinc     36322 Mar  1 16:57 runpilot2-wrapper.sh
[2026-03-01 20:04:13] -rw-r--r--. 1 boinc boinc      5111 Mar  1 16:57 queuedata.json
[2026-03-01 20:04:13] -rw-r--r--. 1 boinc boinc       100 Mar  1 19:59 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-01 20:04:13] -rwxr-xr-x. 1 boinc boinc      7986 Mar  1 19:59 run_atlas
[2026-03-01 20:04:13] -rw-r--r--. 1 boinc boinc       105 Mar  1 19:59 job.xml
[2026-03-01 20:04:13] -rw-r--r--. 2 boinc boinc 189747008 Mar  1 19:59 EVNT.48700856._000063.pool.root.1
[2026-03-01 20:04:13] -rw-r--r--. 1 boinc boinc      6594 Mar  1 19:59 init_data.xml
[2026-03-01 20:04:13] -rw-r--r--. 2 boinc boinc     15845 Mar  1 19:59 start_atlas.sh
[2026-03-01 20:04:13] drwxrwx--x. 2 boinc boinc      4096 Mar  1 19:59 shared
[2026-03-01 20:04:13] -rw-r--r--. 2 boinc boinc    597930 Mar  1 19:59 input.tar.gz
[2026-03-01 20:04:13] -rw-r--r--. 1 boinc boinc         0 Mar  1 19:59 boinc_lockfile
[2026-03-01 20:04:13] -rw-r--r--. 1 boinc boinc      2520 Mar  1 19:59 pandaJob.out
[2026-03-01 20:04:13] -rw-------. 1 boinc boinc    998242 Mar  1 19:59 agis_schedconf.cvmfs.json
[2026-03-01 20:04:13] -rw-------. 1 boinc boinc   1513015 Mar  1 19:59 agis_ddmendpoints.agis.ALL.json
[2026-03-01 20:04:13] -rw-------. 1 boinc boinc       445 Mar  1 20:00 workernode_map.json
[2026-03-01 20:04:13] drwx------. 5 boinc boinc      4096 Mar  1 20:00 pilot3
[2026-03-01 20:04:13] -rw-------. 1 boinc boinc       958 Mar  1 20:01 memory_monitor_summary.json
[2026-03-01 20:04:13] -rw-------. 1 boinc boinc     21589 Mar  1 20:01 log.48700858._001559.job.log.tgz.1
[2026-03-01 20:04:13] -rw-------. 1 boinc boinc      7019 Mar  1 20:03 heartbeat.json
[2026-03-01 20:04:13] -rw-------. 1 boinc boinc        95 Mar  1 20:04 pilot_heartbeat.json
[2026-03-01 20:04:13] -rw-r--r--. 1 boinc boinc        22 Mar  1 20:04 wrapper_checkpoint.txt
[2026-03-01 20:04:13] -rw-r--r--. 1 boinc boinc      8192 Mar  1 20:04 boinc_mmap_file
[2026-03-01 20:04:13] -rw-r--r--. 1 boinc boinc       523 Mar  1 20:04 boinc_task_state.xml
[2026-03-01 20:04:13] -rw-------. 1 boinc boinc      4818 Mar  1 20:04 pilotlog.txt
[2026-03-01 20:04:13] -rw-------. 1 boinc boinc     86209 Mar  1 20:04 log.48700858._001559.job.log.1
[2026-03-01 20:04:13] -rw-------. 1 boinc boinc       188 Mar  1 20:04 output.list
[2026-03-01 20:04:13] -rw-r--r--. 1 boinc boinc       620 Mar  1 20:04 runtime_log
[2026-03-01 20:04:13] -rw-------. 1 boinc boinc    122880 Mar  1 20:04 result.tar.gz
[2026-03-01 20:04:13] -rw-r--r--. 1 boinc boinc      8635 Mar  1 20:04 runtime_log.err
[2026-03-01 20:04:13] -rw-------. 1 boinc boinc       646 Mar  1 20:04 A4hMDmpm6G9n9Rq4apOajLDm4fhM0noT9bVooX4SDmU99KDmtenqfm.diag
[2026-03-01 20:04:13] -rw-r--r--. 1 boinc boinc     21885 Mar  1 20:04 stderr.txt
[2026-03-01 20:04:13] No HITS result produced
[2026-03-01 20:04:13]  *** Contents of shared directory: ***
[2026-03-01 20:04:13] total 186020
[2026-03-01 20:04:13] -rw-r--r--. 2 boinc boinc 189747008 Mar  1 19:59 ATLAS.root_0
[2026-03-01 20:04:13] -rw-r--r--. 2 boinc boinc     15845 Mar  1 19:59 start_atlas.sh
[2026-03-01 20:04:13] -rw-r--r--. 2 boinc boinc    597930 Mar  1 19:59 input.tar.gz
[2026-03-01 20:04:13] -rw-------. 1 boinc boinc    122880 Mar  1 20:04 result.tar.gz
20:04:14 (163153): run_atlas exited; CPU time 20.714164
20:04:14 (163153): called boinc_finish(0)

</stderr_txt>
]]>

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