Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
17:58:06 (2931116): wrapper (7.7.26015): starting
17:58:06 (2931116): wrapper: running run_atlas (--nthreads 4)
[2026-03-02 17:58:06] Arguments: --nthreads 4
[2026-03-02 17:58:06] Threads: 4
[2026-03-02 17:58:06] Checking for CVMFS
[2026-03-02 17:58:06] No cvmfs_config command found, will try listing directly
[2026-03-02 17:58:06] CVMFS is ok
[2026-03-02 17:58:06] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-02 17:58:06] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-02 17:58:06] Further information can be found at the LHC@home message board.
[2026-03-02 17:58:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-02 17:58:06] Checking for apptainer binary...
[2026-03-02 17:58:06] which: no apptainer in ((null))
[2026-03-02 17:58:06] apptainer is not installed, using version from CVMFS
[2026-03-02 17:58:06] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-02 17:58:06] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot184/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut19.grid.cesnet.cz
[2026-03-02 17:58:06] apptainer works
[2026-03-02 17:58:06] Set ATHENA_PROC_NUMBER=4
[2026-03-02 17:58:06] Set ATHENA_CORE_NUMBER=4
[2026-03-02 17:58:06] Starting ATLAS job with PandaID=7035567797
[2026-03-02 17:58:06] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot184/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-02 19:59:38]  *** The last 200 lines of the pilot log: ***
[2026-03-02 19:59:38] 2026-03-02 18:58:38,423 | INFO     | job 7035567797 has state=finished
[2026-03-02 19:59:38] 2026-03-02 18:58:38,423 | INFO     | preparing for final server update for job 7035567797 in state='finished'
[2026-03-02 19:59:38] 2026-03-02 18:58:38,423 | INFO     | reading metadata from: /var/lib/boinc/var/slot184/slots/0/PanDA_Pilot-7035567797/jobReport.json
[2026-03-02 19:59:38] 2026-03-02 18:58:38,425 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot184/slots/0/workernode_map.json
[2026-03-02 19:59:38] 2026-03-02 18:58:38,425 | INFO     | this job has now completed (state=finished)
[2026-03-02 19:59:38] 2026-03-02 18:58:38,425 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-02 19:59:38] 2026-03-02 18:58:38,425 | INFO     | log transfer has been attempted: DONE
[2026-03-02 19:59:38] 2026-03-02 18:58:38,425 | INFO     | job 7035567797 has finished - writing final server update
[2026-03-02 19:59:38] 2026-03-02 18:58:38,425 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_202908/.job.ad'
[2026-03-02 19:59:38] 2026-03-02 18:58:38,425 | INFO     | total number of processed events: 400 (read)
[2026-03-02 19:59:38] 2026-03-02 18:58:38,443 | INFO     | using path: /var/lib/boinc/var/slot184/slots/0/PanDA_Pilot-7035567797/memory_monitor_summary.json (trf name=prmon)
[2026-03-02 19:59:38] 2026-03-02 18:58:38,443 | INFO     | extracted standard info from prmon json
[2026-03-02 19:59:38] 2026-03-02 18:58:38,444 | INFO     | extracted standard memory fields from prmon json
[2026-03-02 19:59:38] 2026-03-02 18:58:38,444 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-02 19:59:38] 2026-03-02 18:58:38,444 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-02 19:59:38] 2026-03-02 18:58:38,444 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-02 19:59:38] 2026-03-02 18:58:38,445 | INFO     | fitting pss+swap vs Time
[2026-03-02 19:59:38] 2026-03-02 18:58:38,446 | INFO     | sum of square deviations: 509440249.5
[2026-03-02 19:59:38] 2026-03-02 18:58:38,446 | INFO     | sum of deviations: 12339783635.0
[2026-03-02 19:59:38] 2026-03-02 18:58:38,446 | INFO     | mean x: 1772474288.5
[2026-03-02 19:59:38] 2026-03-02 18:58:38,446 | INFO     | mean y: 2300215.8305084747
[2026-03-02 19:59:38] 2026-03-02 18:58:38,446 | INFO     | intersect: -42930996162.21818
[2026-03-02 19:59:38] 2026-03-02 18:58:38,446 | INFO     | chi2: 1.1026489889415663
[2026-03-02 19:59:38] 2026-03-02 18:58:38,446 | INFO     | sum of square deviations: 447383272.0
[2026-03-02 19:59:38] 2026-03-02 18:58:38,447 | INFO     | sum of deviations: 11696678630.0
[2026-03-02 19:59:38] 2026-03-02 18:58:38,447 | INFO     | mean x: 1772474136.0
[2026-03-02 19:59:38] 2026-03-02 18:58:38,447 | INFO     | mean y: 2298634.5132743362
[2026-03-02 19:59:38] 2026-03-02 18:58:38,447 | INFO     | intersect: -46338415572.563545
[2026-03-02 19:59:38] 2026-03-02 18:58:38,447 | INFO     | chi2: 1.1041282655692968
[2026-03-02 19:59:38] 2026-03-02 18:58:38,447 | INFO     | current chi2=1.1041282655692968 (change=-0.1341566212426737 %)
[2026-03-02 19:59:38] 2026-03-02 18:58:38,447 | INFO     | right removable region: 112
[2026-03-02 19:59:38] 2026-03-02 18:58:38,447 | INFO     | sum of square deviations: 447383272.0
[2026-03-02 19:59:38] 2026-03-02 18:58:38,447 | INFO     | sum of deviations: 1135363475.9999998
[2026-03-02 19:59:38] 2026-03-02 18:58:38,447 | INFO     | mean x: 1772474441.0
[2026-03-02 19:59:38] 2026-03-02 18:58:38,447 | INFO     | mean y: 2326994.5398230087
[2026-03-02 19:59:38] 2026-03-02 18:58:38,447 | INFO     | intersect: -4495835695.939397
[2026-03-02 19:59:38] 2026-03-02 18:58:38,448 | INFO     | chi2: 0.00023385926287463536
[2026-03-02 19:59:38] 2026-03-02 18:58:38,448 | INFO     | current chi2=0.00023385926287463536 (change=99.9787911415854 %)
[2026-03-02 19:59:38] 2026-03-02 18:58:38,448 | INFO     | sum of square deviations: 390582207.0
[2026-03-02 19:59:38] 2026-03-02 18:58:38,448 | INFO     | sum of deviations: 907978625.4999999
[2026-03-02 19:59:38] 2026-03-02 18:58:38,448 | INFO     | mean x: 1772474593.5
[2026-03-02 19:59:38] 2026-03-02 18:58:38,448 | INFO     | mean y: 2327600.3055555555
[2026-03-02 19:59:38] 2026-03-02 18:58:38,448 | INFO     | intersect: -4118108549.362166
[2026-03-02 19:59:38] 2026-03-02 18:58:38,448 | INFO     | chi2: 0.0001905138143019909
[2026-03-02 19:59:38] 2026-03-02 18:58:38,448 | INFO     | current chi2=0.0001905138143019909 (change=18.534843580637048 %)
[2026-03-02 19:59:38] 2026-03-02 18:58:38,448 | INFO     | left removable region: 20
[2026-03-02 19:59:38] 2026-03-02 18:58:38,448 | INFO     | sum of square deviations: 241429643.0
[2026-03-02 19:59:38] 2026-03-02 18:58:38,449 | INFO     | sum of deviations: 605218881.0
[2026-03-02 19:59:38] 2026-03-02 18:58:38,449 | INFO     | mean x: 1772474715.5
[2026-03-02 19:59:38] 2026-03-02 18:58:38,449 | INFO     | mean y: 2327617.7608695654
[2026-03-02 19:59:38] 2026-03-02 18:58:38,449 | INFO     | intersect: -4440934405.021077
[2026-03-02 19:59:38] 2026-03-02 18:58:38,449 | INFO     | chi2: 6.705925335017139e-05
[2026-03-02 19:59:38] 2026-03-02 18:58:38,449 | INFO     | current memory leak: 2.51 B/s (using 92 data points, chi2=0.00)
[2026-03-02 19:59:38] 2026-03-02 18:58:38,449 | INFO     | could have reported an average CPU frequency of 3571 MHz (7 samples)
[2026-03-02 19:59:38] 2026-03-02 18:58:38,449 | INFO     | ..............................
[2026-03-02 19:59:38] 2026-03-02 18:58:38,449 | INFO     | . Timing measurements:
[2026-03-02 19:59:38] 2026-03-02 18:58:38,449 | INFO     | . get job = 0 s
[2026-03-02 19:59:38] 2026-03-02 18:58:38,449 | INFO     | . initial setup = 4 s
[2026-03-02 19:59:38] 2026-03-02 18:58:38,449 | INFO     | . payload setup = 5 s
[2026-03-02 19:59:38] 2026-03-02 18:58:38,449 | INFO     | . stage-in = 0 s
[2026-03-02 19:59:38] 2026-03-02 18:58:38,449 | INFO     | . payload execution = 7197 s
[2026-03-02 19:59:38] 2026-03-02 18:58:38,449 | INFO     | . stage-out = 0 s
[2026-03-02 19:59:38] 2026-03-02 18:58:38,449 | INFO     | . log creation = 0 s
[2026-03-02 19:59:38] 2026-03-02 18:58:38,449 | INFO     | ..............................
[2026-03-02 19:59:38] 2026-03-02 18:58:38,497 | INFO     | 
[2026-03-02 19:59:38] 2026-03-02 18:58:38,497 | INFO     | job summary report
[2026-03-02 19:59:38] 2026-03-02 18:58:38,497 | INFO     | --------------------------------------------------
[2026-03-02 19:59:38] 2026-03-02 18:58:38,497 | INFO     | PanDA job id: 7035567797
[2026-03-02 19:59:38] 2026-03-02 18:58:38,497 | INFO     | task id: 48844697
[2026-03-02 19:59:38] 2026-03-02 18:58:38,497 | INFO     | errors: (none)
[2026-03-02 19:59:38] 2026-03-02 18:58:38,497 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-02 19:59:38] 2026-03-02 18:58:38,497 | INFO     | pilot state: finished 
[2026-03-02 19:59:38] 2026-03-02 18:58:38,497 | INFO     | transexitcode: 0
[2026-03-02 19:59:38] 2026-03-02 18:58:38,497 | INFO     | exeerrorcode: 0
[2026-03-02 19:59:38] 2026-03-02 18:58:38,497 | INFO     | exeerrordiag: 
[2026-03-02 19:59:38] 2026-03-02 18:58:38,497 | INFO     | exitcode: 0
[2026-03-02 19:59:38] 2026-03-02 18:58:38,497 | INFO     | exitmsg: OK
[2026-03-02 19:59:38] 2026-03-02 18:58:38,497 | INFO     | cpuconsumptiontime: 27844 s
[2026-03-02 19:59:38] 2026-03-02 18:58:38,497 | INFO     | nevents: 400
[2026-03-02 19:59:38] 2026-03-02 18:58:38,497 | INFO     | neventsw: 0
[2026-03-02 19:59:38] 2026-03-02 18:58:38,497 | INFO     | pid: 2941582
[2026-03-02 19:59:38] 2026-03-02 18:58:38,497 | INFO     | pgrp: 2941582
[2026-03-02 19:59:38] 2026-03-02 18:58:38,497 | INFO     | corecount: 4
[2026-03-02 19:59:38] 2026-03-02 18:58:38,497 | INFO     | event service: False
[2026-03-02 19:59:38] 2026-03-02 18:58:38,498 | INFO     | sizes: {0: 2281884, 1: 2282345, 11: 2282345, 7206: 2309658, 7207: 2318680, 7208: 2319058}
[2026-03-02 19:59:38] 2026-03-02 18:58:38,498 | INFO     | --------------------------------------------------
[2026-03-02 19:59:38] 2026-03-02 18:58:38,498 | INFO     | 
[2026-03-02 19:59:38] 2026-03-02 18:58:38,498 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot184/slots/0
[2026-03-02 19:59:38] 2026-03-02 18:58:38,513 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-02 19:59:38] 2026-03-02 18:58:38,513 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-02 19:59:38] 2026-03-02 18:58:38,513 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-02 19:59:38] 2026-03-02 18:58:38,513 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-02 19:59:38] 2026-03-02 18:58:38,513 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-02 19:59:38] 2026-03-02 18:58:38,514 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-02 19:59:38] 2026-03-02 18:58:38,514 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-02 19:59:38] 2026-03-02 18:58:38,514 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-02 19:59:38] 2026-03-02 18:58:38,514 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-02 19:59:38] 2026-03-02 18:58:38,514 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-02 19:59:38] 2026-03-02 18:58:38,514 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-02 19:59:38] 2026-03-02 18:58:38,514 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-02 19:59:38] 2026-03-02 18:58:38,514 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-02 19:59:38] 2026-03-02 18:58:38,514 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-02 19:59:38] 2026-03-02 18:58:38,514 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-02 19:59:38] 2026-03-02 18:58:38,514 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-02 19:59:38] 2026-03-02 18:58:38,514 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-02 19:59:38] 2026-03-02 18:58:38,514 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-02 19:59:38] 2026-03-02 18:58:38,514 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-02 19:59:38] 2026-03-02 18:58:38,514 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-02 19:59:38] 2026-03-02 18:58:38,514 | INFO     | job 7035567797 has completed (purged errors)
[2026-03-02 19:59:38] 2026-03-02 18:58:38,514 | INFO     | overall cleanup function is called
[2026-03-02 19:59:38] 2026-03-02 18:58:39,521 | INFO     | --- collectZombieJob: --- 10, [2941582]
[2026-03-02 19:59:38] 2026-03-02 18:58:39,521 | INFO     | zombie collector waiting for pid 2941582
[2026-03-02 19:59:38] 2026-03-02 18:58:39,521 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-02 19:59:38] 2026-03-02 18:58:39,521 | INFO     | collected zombie processes
[2026-03-02 19:59:38] 2026-03-02 18:58:39,521 | INFO     | will attempt to kill all subprocesses of pid=2941582
[2026-03-02 19:59:38] 2026-03-02 18:58:39,972 | INFO     | process IDs to be killed: [2941582] (in reverse order)
[2026-03-02 19:59:38] 2026-03-02 18:58:40,179 | WARNING  | found no corresponding commands to process id(s)
[2026-03-02 19:59:38] 2026-03-02 18:58:40,180 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-02 19:59:38] 2026-03-02 18:58:40,208 | INFO     | did not find any defunct processes belonging to 2941582
[2026-03-02 19:59:38] 2026-03-02 18:58:40,234 | INFO     | did not find any defunct processes belonging to 2941582
[2026-03-02 19:59:38] 2026-03-02 18:58:40,234 | INFO     | ready for new job
[2026-03-02 19:59:38] 2026-03-02 18:58:40,234 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-02 19:59:38] 2026-03-02 18:58:40,236 | INFO     | **************************************
[2026-03-02 19:59:38] 2026-03-02 18:58:40,236 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-02 19:59:38] 2026-03-02 18:58:40,236 | INFO     | **************************************
[2026-03-02 19:59:38] 2026-03-02 18:58:40,236 | INFO     | 
[2026-03-02 19:59:38] 2026-03-02 18:58:40,241 | INFO     | architecture information:
[2026-03-02 19:59:38] 2026-03-02 18:58:40,241 | INFO     | executing command: cat /etc/os-release
[2026-03-02 19:59:38] 2026-03-02 18:58:40,255 | INFO     | cat /etc/os-release:
[2026-03-02 19:59:38] NAME="CentOS Linux"
[2026-03-02 19:59:38] VERSION="7 (Core)"
[2026-03-02 19:59:38] ID="centos"
[2026-03-02 19:59:38] ID_LIKE="rhel fedora"
[2026-03-02 19:59:38] VERSION_ID="7"
[2026-03-02 19:59:38] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-02 19:59:38] ANSI_COLOR="0;31"
[2026-03-02 19:59:38] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-02 19:59:38] HOME_URL="https://www.centos.org/"
[2026-03-02 19:59:38] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-02 19:59:38] 
[2026-03-02 19:59:38] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-02 19:59:38] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-02 19:59:38] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-02 19:59:38] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-02 19:59:38] 
[2026-03-02 19:59:38] 2026-03-02 18:58:40,256 | INFO     | **************************************
[2026-03-02 19:59:38] 2026-03-02 18:58:40,758 | INFO     | executing command: df -mP /var/lib/boinc/var/slot184/slots/0
[2026-03-02 19:59:38] 2026-03-02 18:58:40,774 | INFO     | sufficient remaining disk space (21416116224 B)
[2026-03-02 19:59:38] 2026-03-02 18:58:40,774 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-02 19:59:38] 2026-03-02 18:58:40,774 | INFO     | current server update state: UPDATING_FINAL
[2026-03-02 19:59:38] 2026-03-02 18:58:40,774 | INFO     | update_server=False
[2026-03-02 19:59:38] 2026-03-02 18:58:40,774 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-02 19:59:38] 2026-03-02 18:58:40,774 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-02 19:59:38] 2026-03-02 18:58:40,775 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-02 19:59:38] 2026-03-02 18:58:40,775 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-02 19:59:38] 2026-03-02 18:58:40,775 | INFO     | aborting loop
[2026-03-02 19:59:38] 2026-03-02 18:58:40,925 | INFO     | job.realtimelogging is not enabled
[2026-03-02 19:59:38] 2026-03-02 18:58:41,398 | INFO     | all data control threads have been joined
[2026-03-02 19:59:38] 2026-03-02 18:58:41,555 | INFO     | all payload control threads have been joined
[2026-03-02 19:59:38] 2026-03-02 18:58:41,776 | INFO     | [job] retrieve thread has finished
[2026-03-02 19:59:38] 2026-03-02 18:58:41,781 | INFO     | [job] job monitor thread has finished
[2026-03-02 19:59:38] 2026-03-02 18:58:41,830 | INFO     | [job] create_data_payload thread has finished
[2026-03-02 19:59:38] 2026-03-02 18:58:41,917 | INFO     | [payload] execute_payloads thread has finished
[2026-03-02 19:59:38] 2026-03-02 18:58:41,929 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-02 19:59:38] 2026-03-02 18:58:41,938 | INFO     | [data] copytool_in thread has finished
[2026-03-02 19:59:38] 2026-03-02 18:58:41,955 | INFO     | [payload] validate_pre thread has finished
[2026-03-02 19:59:38] 2026-03-02 18:58:41,980 | INFO     | all job control threads have been joined
[2026-03-02 19:59:38] 2026-03-02 18:58:42,262 | INFO     | [payload] validate_post thread has finished
[2026-03-02 19:59:38] 2026-03-02 18:58:42,405 | INFO     | [data] control thread has finished
[2026-03-02 19:59:38] 2026-03-02 18:58:42,560 | INFO     | [payload] control thread has finished
[2026-03-02 19:59:38] 2026-03-02 18:58:42,781 | INFO     | [data] copytool_out thread has finished
[2026-03-02 19:59:38] 2026-03-02 18:58:42,807 | INFO     | [payload] failed_post thread has finished
[2026-03-02 19:59:38] 2026-03-02 18:58:42,985 | INFO     | [job] control thread has finished
[2026-03-02 19:59:38] 2026-03-02 18:58:43,031 | INFO     | [job] validate thread has finished
[2026-03-02 19:59:38] 2026-03-02 18:58:43,507 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-02 19:59:38] 2026-03-02 18:58:44,513 | INFO     | [job] queue monitor thread has finished
[2026-03-02 19:59:38] 2026-03-02 18:58:44,779 | INFO     | [data] queue_monitor thread has finished
[2026-03-02 19:59:38] 2026-03-02 18:59:11,578 | INFO     | PID=2935714 has CPU usage=6.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-02 19:59:38] 2026-03-02 18:59:11,579 | INFO     | .. there are 46 such processes running
[2026-03-02 19:59:38] 2026-03-02 18:59:11,579 | INFO     | found 0 job(s) in 20 queues
[2026-03-02 19:59:38] 2026-03-02 18:59:11,579 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-02 19:59:38] 2026-03-02 18:59:11,579 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-02 19:59:38] 2026-03-02 18:59:30,791 | INFO     | [monitor] cgroup control has ended
[2026-03-02 19:59:38] 2026-03-02 18:59:32,717 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22682361497408)>', '<ExcThread(monitor, started 22682053629696)>']
[2026-03-02 19:59:38] 2026-03-02 18:59:33,678 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-02 19:59:38] 2026-03-02 18:59:33,678 | INFO     | [monitor] control thread has ended
[2026-03-02 19:59:38] 2026-03-02 18:59:37,742 | INFO     | all workflow threads have been joined
[2026-03-02 19:59:38] 2026-03-02 18:59:37,742 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-02 19:59:38] 2026-03-02 18:59:37,742 | INFO     | traces error code: 0
[2026-03-02 19:59:38] 2026-03-02 18:59:37,743 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-02 19:59:38] 2026-03-02 18:59:37,921 [wrapper] ==== pilot stdout END ====
[2026-03-02 19:59:38] 2026-03-02 18:59:37,923 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-02 19:59:38] 2026-03-02 18:59:37,925 [wrapper] pilotpid: 2935714
[2026-03-02 19:59:38] 2026-03-02 18:59:37,926 [wrapper] Pilot exit status: 0
[2026-03-02 19:59:38] 2026-03-02 18:59:37,933 [wrapper] pandaids: 7035567797
[2026-03-02 19:59:38] 2026-03-02 18:59:38,054 [wrapper] cleanup supervisor_pilot 3877998 2935715
[2026-03-02 19:59:38] 2026-03-02 18:59:38,057 [wrapper] Test setup, not cleaning
[2026-03-02 19:59:38] 2026-03-02 18:59:38,059 [wrapper] apfmon messages muted
[2026-03-02 19:59:38] 2026-03-02 18:59:38,061 [wrapper] ==== wrapper stdout END ====
[2026-03-02 19:59:38] 2026-03-02 18:59:38,062 [wrapper] ==== wrapper stderr END ====
[2026-03-02 19:59:38]  *** Error codes and diagnostics ***
[2026-03-02 19:59:38]     "exeErrorCode": 0,
[2026-03-02 19:59:38]     "exeErrorDiag": "",
[2026-03-02 19:59:38]     "pilotErrorCode": 0,
[2026-03-02 19:59:38]     "pilotErrorDiag": "",
[2026-03-02 19:59:38]  *** Listing of results directory ***
[2026-03-02 19:59:38] total 379432
[2026-03-02 19:59:38] -rw-r--r--. 1 boinc boinc    584627 Mar  1 22:22 pilot3.tar.gz
[2026-03-02 19:59:38] -rwx------. 1 boinc boinc     36322 Mar  1 22:22 runpilot2-wrapper.sh
[2026-03-02 19:59:38] -rw-r--r--. 1 boinc boinc      5111 Mar  1 22:23 queuedata.json
[2026-03-02 19:59:38] -rw-r--r--. 1 boinc boinc       100 Mar  2 17:58 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-02 19:59:38] -rwxr-xr-x. 1 boinc boinc      7986 Mar  2 17:58 run_atlas
[2026-03-02 19:59:38] -rw-r--r--. 1 boinc boinc       105 Mar  2 17:58 job.xml
[2026-03-02 19:59:38] -rw-r--r--. 2 boinc boinc     15845 Mar  2 17:58 start_atlas.sh
[2026-03-02 19:59:38] drwxrwx--x. 2 boinc boinc      4096 Mar  2 17:58 shared
[2026-03-02 19:59:38] -rw-r--r--. 2 boinc boinc    597975 Mar  2 17:58 input.tar.gz
[2026-03-02 19:59:38] -rw-r--r--. 1 boinc boinc      6706 Mar  2 17:58 init_data.xml
[2026-03-02 19:59:38] -rw-r--r--. 2 boinc boinc 221512232 Mar  2 17:58 EVNT.48453954._000003.pool.root.1
[2026-03-02 19:59:38] -rw-r--r--. 1 boinc boinc         0 Mar  2 17:58 boinc_lockfile
[2026-03-02 19:59:38] -rw-r--r--. 1 boinc boinc      2623 Mar  2 17:58 pandaJob.out
[2026-03-02 19:59:38] -rw-------. 1 boinc boinc    998105 Mar  2 17:58 agis_schedconf.cvmfs.json
[2026-03-02 19:59:38] -rw-------. 1 boinc boinc   1512931 Mar  2 17:58 agis_ddmendpoints.agis.ALL.json
[2026-03-02 19:59:38] -rw-------. 1 boinc boinc       444 Mar  2 17:58 workernode_map.json
[2026-03-02 19:59:38] drwx------. 5 boinc boinc      4096 Mar  2 17:58 pilot3
[2026-03-02 19:59:38] -rw-------. 1 boinc boinc 160394599 Mar  2 19:58 HITS.48844697._000075.pool.root.1
[2026-03-02 19:59:38] -rw-r--r--. 1 boinc boinc       529 Mar  2 19:58 boinc_task_state.xml
[2026-03-02 19:59:38] -rw-------. 1 boinc boinc      1031 Mar  2 19:58 memory_monitor_summary.json
[2026-03-02 19:59:38] -rw-------. 1 boinc boinc    317703 Mar  2 19:58 log.48844697._000075.job.log.tgz.1
[2026-03-02 19:59:38] -rw-------. 1 boinc boinc      6343 Mar  2 19:58 heartbeat.json
[2026-03-02 19:59:38] -rw-------. 1 boinc boinc        95 Mar  2 19:59 pilot_heartbeat.json
[2026-03-02 19:59:38] -rw-r--r--. 1 boinc boinc        27 Mar  2 19:59 wrapper_checkpoint.txt
[2026-03-02 19:59:38] -rw-r--r--. 1 boinc boinc      8192 Mar  2 19:59 boinc_mmap_file
[2026-03-02 19:59:38] -rw-------. 1 boinc boinc      4902 Mar  2 19:59 pilotlog.txt
[2026-03-02 19:59:38] -rw-------. 1 boinc boinc   1031898 Mar  2 19:59 log.48844697._000075.job.log.1
[2026-03-02 19:59:38] -rw-------. 1 boinc boinc       357 Mar  2 19:59 output.list
[2026-03-02 19:59:38] -rw-r--r--. 1 boinc boinc       620 Mar  2 19:59 runtime_log
[2026-03-02 19:59:38] -rw-------. 1 boinc boinc   1372160 Mar  2 19:59 result.tar.gz
[2026-03-02 19:59:38] -rw-r--r--. 1 boinc boinc      9221 Mar  2 19:59 runtime_log.err
[2026-03-02 19:59:38] -rw-------. 1 boinc boinc       662 Mar  2 19:59 RyfLDmmQ3G9n9Rq4apOajLDm4fhM0noT9bVooX4SDmuj9KDmBllien.diag
[2026-03-02 19:59:38] -rw-r--r--. 1 boinc boinc     21095 Mar  2 19:59 stderr.txt
[2026-03-02 19:59:38] HITS file was successfully produced:
[2026-03-02 19:59:38] -rw-------. 1 boinc boinc 160394599 Mar  2 19:58 shared/HITS.pool.root.1
[2026-03-02 19:59:38]  *** Contents of shared directory: ***
[2026-03-02 19:59:38] total 374908
[2026-03-02 19:59:38] -rw-r--r--. 2 boinc boinc     15845 Mar  2 17:58 start_atlas.sh
[2026-03-02 19:59:38] -rw-r--r--. 2 boinc boinc    597975 Mar  2 17:58 input.tar.gz
[2026-03-02 19:59:38] -rw-r--r--. 2 boinc boinc 221512232 Mar  2 17:58 ATLAS.root_0
[2026-03-02 19:59:38] -rw-------. 1 boinc boinc 160394599 Mar  2 19:58 HITS.pool.root.1
[2026-03-02 19:59:38] -rw-------. 1 boinc boinc   1372160 Mar  2 19:59 result.tar.gz
19:59:40 (2931116): run_atlas exited; CPU time 28162.063581
19:59:40 (2931116): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN