Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
07:40:02 (31049): wrapper (7.7.26015): starting
07:40:02 (31049): wrapper: running run_atlas (--nthreads 8)
[2026-03-02 07:40:02] Arguments: --nthreads 8
[2026-03-02 07:40:02] Threads: 8
[2026-03-02 07:40:02] Checking for CVMFS
[2026-03-02 07:40:03] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-02 07:40:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-02 07:40:04] Running cvmfs_config stat atlas.cern.ch
[2026-03-02 07:40:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-02 07:40:05] 2.11.2.0 17161 90189 131092 156797 1 53 23741035 25165824 899 130560 155 19942150 99.805 13405749 568 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-03-02 07:40:05] CVMFS is ok
[2026-03-02 07:40:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-02 07:40:05] Checking for apptainer binary...
[2026-03-02 07:40:05] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-02 07:40:05] Running /usr/bin/apptainer --version
[2026-03-02 07:40:06] apptainer version 1.3.2-1.el7
[2026-03-02 07:40:06] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-02 07:40:27] cg-vwn491.simple-grid.lan
[2026-03-02 07:40:27] apptainer works
[2026-03-02 07:40:27] Set ATHENA_PROC_NUMBER=8
[2026-03-02 07:40:27] Set ATHENA_CORE_NUMBER=8
[2026-03-02 07:40:27] Starting ATLAS job with PandaID=7035612402
[2026-03-02 07:40:27] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/9 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-02 13:28:04]  *** The last 200 lines of the pilot log: ***
[2026-03-02 13:28:04] 2026-03-02 12:27:24,903 | INFO     | fitting pss+swap vs Time
[2026-03-02 13:28:04] 2026-03-02 12:27:24,903 | INFO     | sum of square deviations: 11143362422.5
[2026-03-02 13:28:04] 2026-03-02 12:27:24,907 | INFO     | sum of deviations: 247829747445.0
[2026-03-02 13:28:04] 2026-03-02 12:27:24,907 | INFO     | mean x: 1772444350.5
[2026-03-02 13:28:04] 2026-03-02 12:27:24,907 | INFO     | mean y: 2467324.43030303
[2026-03-02 13:28:04] 2026-03-02 12:27:24,907 | INFO     | intersect: -39416912490.21128
[2026-03-02 13:28:04] 2026-03-02 12:27:24,908 | INFO     | chi2: 9.125655314677129
[2026-03-02 13:28:04] 2026-03-02 12:27:24,911 | INFO     | sum of square deviations: 10644478650.0
[2026-03-02 13:28:04] 2026-03-02 12:27:24,915 | INFO     | sum of deviations: 266046261990.99994
[2026-03-02 13:28:04] 2026-03-02 12:27:24,915 | INFO     | mean x: 1772444198.0
[2026-03-02 13:28:04] 2026-03-02 12:27:24,915 | INFO     | mean y: 2472808.883076923
[2026-03-02 13:28:04] 2026-03-02 12:27:24,915 | INFO     | intersect: -44297691527.06923
[2026-03-02 13:28:04] 2026-03-02 12:27:24,916 | INFO     | chi2: 8.402473746651555
[2026-03-02 13:28:04] 2026-03-02 12:27:24,916 | INFO     | current chi2=8.402473746651555 (change=7.924708342451352 %)
[2026-03-02 13:28:04] 2026-03-02 12:27:24,916 | INFO     | right removable region: 324
[2026-03-02 13:28:04] 2026-03-02 12:27:24,917 | INFO     | sum of square deviations: 10644478650.0
[2026-03-02 13:28:04] 2026-03-02 12:27:24,920 | INFO     | sum of deviations: 129094977588.00006
[2026-03-02 13:28:04] 2026-03-02 12:27:24,920 | INFO     | mean x: 1772444503.0
[2026-03-02 13:28:04] 2026-03-02 12:27:24,920 | INFO     | mean y: 2503606.5046153846
[2026-03-02 13:28:04] 2026-03-02 12:27:24,920 | INFO     | intersect: -21493493606.16854
[2026-03-02 13:28:04] 2026-03-02 12:27:24,921 | INFO     | chi2: 4.0485757923762025
[2026-03-02 13:28:04] 2026-03-02 12:27:24,921 | INFO     | current chi2=4.0485757923762025 (change=55.635232180370345 %)
[2026-03-02 13:28:04] 2026-03-02 12:27:24,921 | INFO     | sum of square deviations: 10160711440.0
[2026-03-02 13:28:04] 2026-03-02 12:27:24,925 | INFO     | sum of deviations: 36230727228.000015
[2026-03-02 13:28:04] 2026-03-02 12:27:24,925 | INFO     | mean x: 1772444655.5
[2026-03-02 13:28:04] 2026-03-02 12:27:24,925 | INFO     | mean y: 2532858.13125
[2026-03-02 13:28:04] 2026-03-02 12:27:24,925 | INFO     | intersect: -6317591398.851581
[2026-03-02 13:28:04] 2026-03-02 12:27:24,926 | INFO     | chi2: 1.1597606186662843
[2026-03-02 13:28:04] 2026-03-02 12:27:24,926 | INFO     | current chi2=1.1597606186662843 (change=71.35386174935374 %)
[2026-03-02 13:28:04] 2026-03-02 12:27:24,926 | INFO     | sum of square deviations: 9691828230.0
[2026-03-02 13:28:04] 2026-03-02 12:27:24,929 | INFO     | sum of deviations: 10824938670.999996
[2026-03-02 13:28:04] 2026-03-02 12:27:24,930 | INFO     | mean x: 1772444808.0
[2026-03-02 13:28:04] 2026-03-02 12:27:24,930 | INFO     | mean y: 2541082.3746031746
[2026-03-02 13:28:04] 2026-03-02 12:27:24,930 | INFO     | intersect: -1977127344.3668356
[2026-03-02 13:28:04] 2026-03-02 12:27:24,930 | INFO     | chi2: 0.8620072701245577
[2026-03-02 13:28:04] 2026-03-02 12:27:24,930 | INFO     | current chi2=0.8620072701245577 (change=25.673690221016525 %)
[2026-03-02 13:28:04] 2026-03-02 12:27:24,931 | INFO     | sum of square deviations: 9237596457.5
[2026-03-02 13:28:04] 2026-03-02 12:27:24,938 | INFO     | sum of deviations: -1829307894.0
[2026-03-02 13:28:04] 2026-03-02 12:27:24,938 | INFO     | mean x: 1772444960.5
[2026-03-02 13:28:04] 2026-03-02 12:27:24,938 | INFO     | mean y: 2545309.2838709676
[2026-03-02 13:28:04] 2026-03-02 12:27:24,939 | INFO     | intersect: 353540026.66955066
[2026-03-02 13:28:04] 2026-03-02 12:27:24,939 | INFO     | chi2: 0.7939476097383941
[2026-03-02 13:28:04] 2026-03-02 12:27:24,939 | INFO     | current chi2=0.7939476097383941 (change=7.895485658297197 %)
[2026-03-02 13:28:04] 2026-03-02 12:27:24,939 | INFO     | left removable region: 40
[2026-03-02 13:28:04] 2026-03-02 12:27:24,940 | INFO     | sum of square deviations: 7102775035.0
[2026-03-02 13:28:04] 2026-03-02 12:27:24,942 | INFO     | sum of deviations: 9563333285.5
[2026-03-02 13:28:04] 2026-03-02 12:27:24,942 | INFO     | mean x: 1772445387.5
[2026-03-02 13:28:04] 2026-03-02 12:27:24,943 | INFO     | mean y: 2555891.2359154928
[2026-03-02 13:28:04] 2026-03-02 12:27:24,943 | INFO     | intersect: -2383903751.2958565
[2026-03-02 13:28:04] 2026-03-02 12:27:24,943 | INFO     | chi2: 0.0006959812565624786
[2026-03-02 13:28:04] 2026-03-02 12:27:24,943 | INFO     | current memory leak: 1.35 B/s (using 284 data points, chi2=0.00)
[2026-03-02 13:28:04] 2026-03-02 12:27:24,944 | INFO     | could have reported an average CPU frequency of 2249 MHz (15 samples)
[2026-03-02 13:28:04] 2026-03-02 12:27:24,944 | INFO     | ..............................
[2026-03-02 13:28:04] 2026-03-02 12:27:24,944 | INFO     | . Timing measurements:
[2026-03-02 13:28:04] 2026-03-02 12:27:24,944 | INFO     | . get job = 0 s
[2026-03-02 13:28:04] 2026-03-02 12:27:24,944 | INFO     | . initial setup = 119 s
[2026-03-02 13:28:04] 2026-03-02 12:27:24,944 | INFO     | . payload setup = 149 s
[2026-03-02 13:28:04] 2026-03-02 12:27:24,945 | INFO     | . stage-in = 0 s
[2026-03-02 13:28:04] 2026-03-02 12:27:24,945 | INFO     | . payload execution = 20250 s
[2026-03-02 13:28:04] 2026-03-02 12:27:24,945 | INFO     | . stage-out = 4 s
[2026-03-02 13:28:04] 2026-03-02 12:27:24,945 | INFO     | . log creation = 1 s
[2026-03-02 13:28:04] 2026-03-02 12:27:24,945 | INFO     | ..............................
[2026-03-02 13:28:04] 2026-03-02 12:27:25,085 | INFO     | 
[2026-03-02 13:28:04] 2026-03-02 12:27:25,086 | INFO     | job summary report
[2026-03-02 13:28:04] 2026-03-02 12:27:25,086 | INFO     | --------------------------------------------------
[2026-03-02 13:28:04] 2026-03-02 12:27:25,086 | INFO     | PanDA job id: 7035612402
[2026-03-02 13:28:04] 2026-03-02 12:27:25,086 | INFO     | task id: 48841995
[2026-03-02 13:28:04] 2026-03-02 12:27:25,086 | INFO     | errors: (none)
[2026-03-02 13:28:04] 2026-03-02 12:27:25,086 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-02 13:28:04] 2026-03-02 12:27:25,086 | INFO     | pilot state: finished 
[2026-03-02 13:28:04] 2026-03-02 12:27:25,086 | INFO     | transexitcode: 0
[2026-03-02 13:28:04] 2026-03-02 12:27:25,087 | INFO     | exeerrorcode: 0
[2026-03-02 13:28:04] 2026-03-02 12:27:25,087 | INFO     | exeerrordiag: 
[2026-03-02 13:28:04] 2026-03-02 12:27:25,087 | INFO     | exitcode: 0
[2026-03-02 13:28:04] 2026-03-02 12:27:25,087 | INFO     | exitmsg: OK
[2026-03-02 13:28:04] 2026-03-02 12:27:25,087 | INFO     | cpuconsumptiontime: 76635 s
[2026-03-02 13:28:04] 2026-03-02 12:27:25,087 | INFO     | nevents: 400
[2026-03-02 13:28:04] 2026-03-02 12:27:25,087 | INFO     | neventsw: 0
[2026-03-02 13:28:04] 2026-03-02 12:27:25,087 | INFO     | pid: 7114
[2026-03-02 13:28:04] 2026-03-02 12:27:25,087 | INFO     | pgrp: 7114
[2026-03-02 13:28:04] 2026-03-02 12:27:25,087 | INFO     | corecount: 8
[2026-03-02 13:28:04] 2026-03-02 12:27:25,087 | INFO     | event service: False
[2026-03-02 13:28:04] 2026-03-02 12:27:25,088 | INFO     | sizes: {0: 2281083, 1: 2281768, 2: 2282229, 13: 2282229, 20404: 2315658, 20405: 2315657, 20409: 2324839, 20410: 2324895, 20412: 2325089}
[2026-03-02 13:28:04] 2026-03-02 12:27:25,088 | INFO     | --------------------------------------------------
[2026-03-02 13:28:04] 2026-03-02 12:27:25,088 | INFO     | 
[2026-03-02 13:28:04] 2026-03-02 12:27:25,088 | INFO     | executing command: ls -lF /var/lib/boinc/slots/9
[2026-03-02 13:28:04] 2026-03-02 12:27:25,676 | INFO     | time since job start (20426s) is within the limit (349056.0s)
[2026-03-02 13:28:04] 2026-03-02 12:27:25,699 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-02 13:28:04] 2026-03-02 12:27:25,699 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-02 13:28:04] 2026-03-02 12:27:25,699 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-02 13:28:04] 2026-03-02 12:27:25,699 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-02 13:28:04] 2026-03-02 12:27:25,699 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-02 13:28:04] 2026-03-02 12:27:25,700 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-02 13:28:04] 2026-03-02 12:27:25,700 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-02 13:28:04] 2026-03-02 12:27:25,700 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-02 13:28:04] 2026-03-02 12:27:25,700 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-02 13:28:04] 2026-03-02 12:27:25,700 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-02 13:28:04] 2026-03-02 12:27:25,700 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-02 13:28:04] 2026-03-02 12:27:25,700 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-02 13:28:04] 2026-03-02 12:27:25,700 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-02 13:28:04] 2026-03-02 12:27:25,701 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-02 13:28:04] 2026-03-02 12:27:25,701 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-02 13:28:04] 2026-03-02 12:27:25,701 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-02 13:28:04] 2026-03-02 12:27:25,701 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-02 13:28:04] 2026-03-02 12:27:25,701 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-02 13:28:04] 2026-03-02 12:27:25,701 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-02 13:28:04] 2026-03-02 12:27:25,701 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-02 13:28:04] 2026-03-02 12:27:25,701 | INFO     | job 7035612402 has completed (purged errors)
[2026-03-02 13:28:04] 2026-03-02 12:27:25,701 | INFO     | overall cleanup function is called
[2026-03-02 13:28:04] 2026-03-02 12:27:26,710 | INFO     | --- collectZombieJob: --- 10, [7114]
[2026-03-02 13:28:04] 2026-03-02 12:27:26,711 | INFO     | zombie collector waiting for pid 7114
[2026-03-02 13:28:04] 2026-03-02 12:27:26,711 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-02 13:28:04] 2026-03-02 12:27:26,711 | INFO     | collected zombie processes
[2026-03-02 13:28:04] 2026-03-02 12:27:26,711 | INFO     | will attempt to kill all subprocesses of pid=7114
[2026-03-02 13:28:04] 2026-03-02 12:27:26,793 | INFO     | process IDs to be killed: [7114] (in reverse order)
[2026-03-02 13:28:04] 2026-03-02 12:27:27,722 | WARNING  | found no corresponding commands to process id(s)
[2026-03-02 13:28:04] 2026-03-02 12:27:27,722 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-02 13:28:04] 2026-03-02 12:27:27,725 | INFO     | did not find any defunct processes belonging to 7114
[2026-03-02 13:28:04] 2026-03-02 12:27:27,727 | INFO     | did not find any defunct processes belonging to 7114
[2026-03-02 13:28:04] 2026-03-02 12:27:27,727 | INFO     | ready for new job
[2026-03-02 13:28:04] 2026-03-02 12:27:27,727 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-02 13:28:04] 2026-03-02 12:27:27,729 | INFO     | **************************************
[2026-03-02 13:28:04] 2026-03-02 12:27:27,730 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-02 13:28:04] 2026-03-02 12:27:27,730 | INFO     | **************************************
[2026-03-02 13:28:04] 2026-03-02 12:27:27,730 | INFO     | 
[2026-03-02 13:28:04] 2026-03-02 12:27:27,730 | INFO     | pilot is running in a VM
[2026-03-02 13:28:04] 2026-03-02 12:27:27,731 | INFO     | architecture information:
[2026-03-02 13:28:04] 2026-03-02 12:27:27,738 | INFO     | executing command: cat /etc/os-release
[2026-03-02 13:28:04] 2026-03-02 12:27:27,980 | INFO     | cat /etc/os-release:
[2026-03-02 13:28:04] NAME="CentOS Linux"
[2026-03-02 13:28:04] VERSION="7 (Core)"
[2026-03-02 13:28:04] ID="centos"
[2026-03-02 13:28:04] ID_LIKE="rhel fedora"
[2026-03-02 13:28:04] VERSION_ID="7"
[2026-03-02 13:28:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-02 13:28:04] ANSI_COLOR="0;31"
[2026-03-02 13:28:04] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-02 13:28:04] HOME_URL="https://www.centos.org/"
[2026-03-02 13:28:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-02 13:28:04] 
[2026-03-02 13:28:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-02 13:28:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-02 13:28:04] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-02 13:28:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-02 13:28:04] 
[2026-03-02 13:28:04] 2026-03-02 12:27:27,980 | INFO     | **************************************
[2026-03-02 13:28:04] 2026-03-02 12:27:28,484 | INFO     | executing command: df -mP /var/lib/boinc/slots/9
[2026-03-02 13:28:04] 2026-03-02 12:27:28,697 | INFO     | sufficient remaining disk space (496359178240 B)
[2026-03-02 13:28:04] 2026-03-02 12:27:28,697 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-02 13:28:04] 2026-03-02 12:27:28,698 | INFO     | current server update state: UPDATING_FINAL
[2026-03-02 13:28:04] 2026-03-02 12:27:28,698 | INFO     | update_server=False
[2026-03-02 13:28:04] 2026-03-02 12:27:28,698 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-02 13:28:04] 2026-03-02 12:27:28,698 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-02 13:28:04] 2026-03-02 12:27:28,789 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-02 13:28:04] 2026-03-02 12:27:28,790 | INFO     | aborting loop
[2026-03-02 13:28:04] 2026-03-02 12:27:29,118 | INFO     | all job control threads have been joined
[2026-03-02 13:28:04] 2026-03-02 12:27:29,128 | INFO     | all data control threads have been joined
[2026-03-02 13:28:04] 2026-03-02 12:27:29,302 | INFO     | all payload control threads have been joined
[2026-03-02 13:28:04] 2026-03-02 12:27:29,684 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-02 13:28:04] 2026-03-02 12:27:29,704 | INFO     | [job] retrieve thread has finished
[2026-03-02 13:28:04] 2026-03-02 12:27:29,796 | INFO     | [job] job monitor thread has finished
[2026-03-02 13:28:04] 2026-03-02 12:27:29,895 | INFO     | [payload] execute_payloads thread has finished
[2026-03-02 13:28:04] 2026-03-02 12:27:30,050 | INFO     | [job] create_data_payload thread has finished
[2026-03-02 13:28:04] 2026-03-02 12:27:30,096 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-02 13:28:04] 2026-03-02 12:27:30,125 | INFO     | [job] control thread has finished
[2026-03-02 13:28:04] 2026-03-02 12:27:30,135 | INFO     | [data] control thread has finished
[2026-03-02 13:28:04] 2026-03-02 12:27:30,309 | INFO     | [payload] control thread has finished
[2026-03-02 13:28:04] 2026-03-02 12:27:30,310 | INFO     | [payload] validate_pre thread has finished
[2026-03-02 13:28:04] 2026-03-02 12:27:30,327 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-02 13:28:04] 2026-03-02 12:27:30,712 | INFO     | [data] copytool_in thread has finished
[2026-03-02 13:28:04] 2026-03-02 12:27:31,023 | INFO     | [job] validate thread has finished
[2026-03-02 13:28:04] 2026-03-02 12:27:31,102 | INFO     | [job] queue monitor thread has finished
[2026-03-02 13:28:04] 2026-03-02 12:27:31,199 | INFO     | [payload] validate_post thread has finished
[2026-03-02 13:28:04] 2026-03-02 12:27:31,219 | INFO     | [payload] failed_post thread has finished
[2026-03-02 13:28:04] 2026-03-02 12:27:31,691 | INFO     | [data] copytool_out thread has finished
[2026-03-02 13:28:04] 2026-03-02 12:27:32,707 | INFO     | [data] queue_monitor thread has finished
[2026-03-02 13:28:04] 2026-03-02 12:27:34,456 | INFO     | [monitor] cgroup control has ended
[2026-03-02 13:28:04] 2026-03-02 12:27:36,544 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140713638008640)>', '<ExcThread(monitor, started 140713027155712)>']
[2026-03-02 13:28:04] 2026-03-02 12:27:41,570 | INFO     | all workflow threads have been joined
[2026-03-02 13:28:04] 2026-03-02 12:27:41,571 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-02 13:28:04] 2026-03-02 12:27:41,571 | INFO     | traces error code: 0
[2026-03-02 13:28:04] 2026-03-02 12:27:41,571 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-02 13:28:04] 2026-03-02 12:27:58,889 | INFO     | PID=2652 has CPU usage=2.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-03-02 13:28:04] 2026-03-02 12:27:58,889 | INFO     | .. there are 2 such processes running
[2026-03-02 13:28:04] 2026-03-02 12:27:58,890 | INFO     | found 0 job(s) in 20 queues
[2026-03-02 13:28:04] 2026-03-02 12:27:58,890 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-02 13:28:04] 2026-03-02 12:27:58,890 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-02 13:28:04] 2026-03-02 12:27:58,890 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-02 13:28:04] 2026-03-02 12:27:58,890 | CRITICAL | thread 'MainThread' is not alive
[2026-03-02 13:28:04] 2026-03-02 12:27:58,890 | INFO     | [monitor] control thread has ended
[2026-03-02 13:28:04] 2026-03-02 12:27:59,289 [wrapper] ==== pilot stdout END ====
[2026-03-02 13:28:04] 2026-03-02 12:27:59,402 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-02 13:28:04] 2026-03-02 12:27:59,530 [wrapper] pilotpid: 2652
[2026-03-02 13:28:04] 2026-03-02 12:27:59,595 [wrapper] Pilot exit status: 0
[2026-03-02 13:28:04] 2026-03-02 12:28:00,103 [wrapper] pandaids: 7035612402
[2026-03-02 13:28:04] 2026-03-02 12:28:01,007 [wrapper] cleanup supervisor_pilot 13866 2653
[2026-03-02 13:28:04] 2026-03-02 12:28:01,137 [wrapper] Test setup, not cleaning
[2026-03-02 13:28:04] 2026-03-02 12:28:01,215 [wrapper] apfmon messages muted
[2026-03-02 13:28:04] 2026-03-02 12:28:01,348 [wrapper] ==== wrapper stdout END ====
[2026-03-02 13:28:04] 2026-03-02 12:28:01,472 [wrapper] ==== wrapper stderr END ====
[2026-03-02 13:28:04]  *** Error codes and diagnostics ***
[2026-03-02 13:28:04]     "exeErrorCode": 0,
[2026-03-02 13:28:04]     "exeErrorDiag": "",
[2026-03-02 13:28:04]     "pilotErrorCode": 0,
[2026-03-02 13:28:04]     "pilotErrorDiag": "",
[2026-03-02 13:28:04]  *** Listing of results directory ***
[2026-03-02 13:28:04] total 574880
[2026-03-02 13:28:04] -rw-r--r--. 1 boinc boinc    584627 Mar  1 22:22 pilot3.tar.gz
[2026-03-02 13:28:04] -rw-r--r--. 1 boinc boinc      5111 Mar  1 22:22 queuedata.json
[2026-03-02 13:28:04] -rwx------. 1 boinc boinc     36322 Mar  1 22:22 runpilot2-wrapper.sh
[2026-03-02 13:28:04] -rw-r--r--. 1 boinc boinc       100 Mar  2 07:40 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-02 13:28:04] -rwxr-xr-x. 1 boinc boinc      7986 Mar  2 07:40 run_atlas
[2026-03-02 13:28:04] -rw-r--r--. 1 boinc boinc       105 Mar  2 07:40 job.xml
[2026-03-02 13:28:04] -rw-r--r--. 1 boinc boinc      6391 Mar  2 07:40 init_data.xml
[2026-03-02 13:28:04] -rw-r--r--. 2 boinc boinc 313170826 Mar  2 07:40 EVNT.48252743._000049.pool.root.1
[2026-03-02 13:28:04] -rw-r--r--. 2 boinc boinc     15845 Mar  2 07:40 start_atlas.sh
[2026-03-02 13:28:04] drwxrwx--x. 2 boinc boinc        68 Mar  2 07:40 shared
[2026-03-02 13:28:04] -rw-r--r--. 2 boinc boinc    597951 Mar  2 07:40 input.tar.gz
[2026-03-02 13:28:04] -rw-r--r--. 1 boinc boinc         0 Mar  2 07:40 boinc_lockfile
[2026-03-02 13:28:04] -rw-r--r--. 1 boinc boinc      2492 Mar  2 07:40 pandaJob.out
[2026-03-02 13:28:04] -rw-------. 1 boinc boinc       415 Mar  2 07:46 workernode_map.json
[2026-03-02 13:28:04] -rw-------. 1 boinc boinc    998242 Mar  2 07:46 agis_schedconf.cvmfs.json
[2026-03-02 13:28:04] drwx------. 5 boinc boinc      4096 Mar  2 07:47 pilot3
[2026-03-02 13:28:04] -rw-------. 1 boinc boinc 264732100 Mar  2 13:25 HITS.48841995._001254.pool.root.1
[2026-03-02 13:28:04] -rw-r--r--. 1 boinc boinc       530 Mar  2 13:25 boinc_task_state.xml
[2026-03-02 13:28:04] -rw-------. 1 boinc boinc      1015 Mar  2 13:27 memory_monitor_summary.json
[2026-03-02 13:28:04] -rw-------. 1 boinc boinc   1513015 Mar  2 13:27 agis_ddmendpoints.agis.ALL.json
[2026-03-02 13:28:04] -rw-------. 1 boinc boinc    560896 Mar  2 13:27 log.48841995._001254.job.log.tgz.1
[2026-03-02 13:28:04] -rw-------. 1 boinc boinc      6318 Mar  2 13:27 heartbeat.json
[2026-03-02 13:28:04] -rw-------. 1 boinc boinc        95 Mar  2 13:27 pilot_heartbeat.json
[2026-03-02 13:28:04] -rw-------. 1 boinc boinc       889 Mar  2 13:27 pilotlog.txt
[2026-03-02 13:28:04] -rw-------. 1 boinc boinc   2872603 Mar  2 13:28 log.48841995._001254.job.log.1
[2026-03-02 13:28:04] -rw-------. 1 boinc boinc       357 Mar  2 13:28 output.list
[2026-03-02 13:28:04] -rw-r--r--. 1 boinc boinc        28 Mar  2 13:28 wrapper_checkpoint.txt
[2026-03-02 13:28:04] -rw-r--r--. 1 boinc boinc      8192 Mar  2 13:28 boinc_mmap_file
[2026-03-02 13:28:04] -rw-r--r--. 1 boinc boinc       620 Mar  2 13:28 runtime_log
[2026-03-02 13:28:04] -rw-------. 1 boinc boinc   3450880 Mar  2 13:28 result.tar.gz
[2026-03-02 13:28:04] -rw-------. 1 boinc boinc       656 Mar  2 13:28 VeUMDmUQ3G9n9Rq4apOajLDm4fhM0noT9bVooX4SDmCh9KDmlAPWVn.diag
[2026-03-02 13:28:04] -rw-r--r--. 1 boinc boinc      8816 Mar  2 13:28 runtime_log.err
[2026-03-02 13:28:04] -rw-r--r--. 1 boinc boinc     20591 Mar  2 13:28 stderr.txt
[2026-03-02 13:28:04] HITS file was successfully produced:
[2026-03-02 13:28:04] -rw-------. 1 boinc boinc 264732100 Mar  2 13:25 shared/HITS.pool.root.1
[2026-03-02 13:28:04]  *** Contents of shared directory: ***
[2026-03-02 13:28:04] total 568332
[2026-03-02 13:28:04] -rw-r--r--. 2 boinc boinc 313170826 Mar  2 07:40 ATLAS.root_0
[2026-03-02 13:28:04] -rw-r--r--. 2 boinc boinc     15845 Mar  2 07:40 start_atlas.sh
[2026-03-02 13:28:04] -rw-r--r--. 2 boinc boinc    597951 Mar  2 07:40 input.tar.gz
[2026-03-02 13:28:04] -rw-------. 1 boinc boinc 264732100 Mar  2 13:25 HITS.pool.root.1
[2026-03-02 13:28:04] -rw-------. 1 boinc boinc   3450880 Mar  2 13:28 result.tar.gz
13:28:05 (31049): run_atlas exited; CPU time 76845.276687
13:28:05 (31049): called boinc_finish(0)

</stderr_txt>
]]>

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