Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
12:45:46 (3825437): wrapper (7.7.26015): starting
12:45:46 (3825437): wrapper: running run_atlas (--nthreads 4)
[2026-03-02 12:45:46] Arguments: --nthreads 4
[2026-03-02 12:45:46] Threads: 4
[2026-03-02 12:45:46] Checking for CVMFS
[2026-03-02 12:45:46] No cvmfs_config command found, will try listing directly
[2026-03-02 12:45:46] CVMFS is ok
[2026-03-02 12:45:46] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-02 12:45:46] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-02 12:45:46] Further information can be found at the LHC@home message board.
[2026-03-02 12:45:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-02 12:45:46] Checking for apptainer binary...
[2026-03-02 12:45:46] which: no apptainer in ((null))
[2026-03-02 12:45:46] apptainer is not installed, using version from CVMFS
[2026-03-02 12:45:46] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-02 12:45:46] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot28/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut08.grid.cesnet.cz
[2026-03-02 12:45:46] apptainer works
[2026-03-02 12:45:46] Set ATHENA_PROC_NUMBER=4
[2026-03-02 12:45:46] Set ATHENA_CORE_NUMBER=4
[2026-03-02 12:45:46] Starting ATLAS job with PandaID=7035544235
[2026-03-02 12:45:46] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot28/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-02 16:35:29]  *** The last 200 lines of the pilot log: ***
[2026-03-02 16:35:29] 2026-03-02 15:34:48,652 | INFO     | total number of processed events: 400 (read)
[2026-03-02 16:35:29] 2026-03-02 15:34:48,665 | INFO     | using path: /scratch/boinc/var/slot28/slots/0/PanDA_Pilot-7035544235/memory_monitor_summary.json (trf name=prmon)
[2026-03-02 16:35:29] 2026-03-02 15:34:48,666 | INFO     | extracted standard info from prmon json
[2026-03-02 16:35:29] 2026-03-02 15:34:48,666 | INFO     | extracted standard memory fields from prmon json
[2026-03-02 16:35:29] 2026-03-02 15:34:48,666 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-02 16:35:29] 2026-03-02 15:34:48,667 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-02 16:35:29] 2026-03-02 15:34:48,667 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-02 16:35:29] 2026-03-02 15:34:48,671 | INFO     | fitting pss+swap vs Time
[2026-03-02 16:35:29] 2026-03-02 15:34:48,671 | INFO     | sum of square deviations: 3531973200.0
[2026-03-02 16:35:29] 2026-03-02 15:34:48,673 | INFO     | sum of deviations: 20191054473.000004
[2026-03-02 16:35:29] 2026-03-02 15:34:48,673 | INFO     | mean x: 1772458815.0
[2026-03-02 16:35:29] 2026-03-02 15:34:48,673 | INFO     | mean y: 2350828.5555555555
[2026-03-02 16:35:29] 2026-03-02 15:34:48,673 | INFO     | intersect: -10130175795.60287
[2026-03-02 16:35:29] 2026-03-02 15:34:48,673 | INFO     | chi2: 1.3430588407182285
[2026-03-02 16:35:29] 2026-03-02 15:34:48,674 | INFO     | sum of square deviations: 3301699115.0
[2026-03-02 16:35:29] 2026-03-02 15:34:48,675 | INFO     | sum of deviations: 19806658672.499996
[2026-03-02 16:35:29] 2026-03-02 15:34:48,675 | INFO     | mean x: 1772458662.5
[2026-03-02 16:35:29] 2026-03-02 15:34:48,676 | INFO     | mean y: 2350573.95
[2026-03-02 16:35:29] 2026-03-02 15:34:48,676 | INFO     | intersect: -10630503152.714724
[2026-03-02 16:35:29] 2026-03-02 15:34:48,676 | INFO     | chi2: 1.343716915281402
[2026-03-02 16:35:29] 2026-03-02 15:34:48,676 | INFO     | current chi2=1.343716915281402 (change=-0.04899819302194846 %)
[2026-03-02 16:35:29] 2026-03-02 15:34:48,676 | INFO     | right removable region: 219
[2026-03-02 16:35:29] 2026-03-02 15:34:48,677 | INFO     | sum of square deviations: 3301699115.0
[2026-03-02 16:35:29] 2026-03-02 15:34:48,678 | INFO     | sum of deviations: -9327271978.0
[2026-03-02 16:35:29] 2026-03-02 15:34:48,678 | INFO     | mean x: 1772458967.5
[2026-03-02 16:35:29] 2026-03-02 15:34:48,678 | INFO     | mean y: 2370161.381818182
[2026-03-02 16:35:29] 2026-03-02 15:34:48,678 | INFO     | intersect: 5009551701.519694
[2026-03-02 16:35:29] 2026-03-02 15:34:48,679 | INFO     | chi2: 0.02096246262547698
[2026-03-02 16:35:29] 2026-03-02 15:34:48,679 | INFO     | current chi2=0.02096246262547698 (change=98.43919998216408 %)
[2026-03-02 16:35:29] 2026-03-02 15:34:48,679 | INFO     | sum of square deviations: 3081657780.0
[2026-03-02 16:35:29] 2026-03-02 15:34:48,681 | INFO     | sum of deviations: -10822501050.0
[2026-03-02 16:35:29] 2026-03-02 15:34:48,681 | INFO     | mean x: 1772459120.0
[2026-03-02 16:35:29] 2026-03-02 15:34:48,681 | INFO     | mean y: 2371181.604651163
[2026-03-02 16:35:29] 2026-03-02 15:34:48,681 | INFO     | intersect: 6227085947.720594
[2026-03-02 16:35:29] 2026-03-02 15:34:48,681 | INFO     | chi2: 0.013750064213406549
[2026-03-02 16:35:29] 2026-03-02 15:34:48,681 | INFO     | current chi2=0.013750064213406549 (change=34.40625531899462 %)
[2026-03-02 16:35:29] 2026-03-02 15:34:48,682 | INFO     | sum of square deviations: 2871616632.5
[2026-03-02 16:35:29] 2026-03-02 15:34:48,683 | INFO     | sum of deviations: -10258354292.5
[2026-03-02 16:35:29] 2026-03-02 15:34:48,683 | INFO     | mean x: 1772459272.5
[2026-03-02 16:35:29] 2026-03-02 15:34:48,683 | INFO     | mean y: 2370770.595238095
[2026-03-02 16:35:29] 2026-03-02 15:34:48,683 | INFO     | intersect: 6334175295.108767
[2026-03-02 16:35:29] 2026-03-02 15:34:48,684 | INFO     | chi2: 0.013700348877855463
[2026-03-02 16:35:29] 2026-03-02 15:34:48,684 | INFO     | current chi2=0.013700348877855463 (change=0.3615643882056376 %)
[2026-03-02 16:35:29] 2026-03-02 15:34:48,684 | INFO     | left removable region: 30
[2026-03-02 16:35:29] 2026-03-02 15:34:48,684 | INFO     | sum of square deviations: 2093397390.0
[2026-03-02 16:35:29] 2026-03-02 15:34:48,685 | INFO     | sum of deviations: -5962419136.000001
[2026-03-02 16:35:29] 2026-03-02 15:34:48,685 | INFO     | mean x: 1772459547.0
[2026-03-02 16:35:29] 2026-03-02 15:34:48,686 | INFO     | mean y: 2367616.2592592593
[2026-03-02 16:35:29] 2026-03-02 15:34:48,686 | INFO     | intersect: 5050690868.8351555
[2026-03-02 16:35:29] 2026-03-02 15:34:48,686 | INFO     | chi2: 0.011416261963606903
[2026-03-02 16:35:29] 2026-03-02 15:34:48,686 | INFO     | current memory leak: -2.85 B/s (using 189 data points, chi2=0.01)
[2026-03-02 16:35:29] 2026-03-02 15:34:48,687 | INFO     | could have reported an average CPU frequency of 2653 MHz (11 samples)
[2026-03-02 16:35:29] 2026-03-02 15:34:48,687 | INFO     | ..............................
[2026-03-02 16:35:29] 2026-03-02 15:34:48,687 | INFO     | . Timing measurements:
[2026-03-02 16:35:29] 2026-03-02 15:34:48,687 | INFO     | . get job = 0 s
[2026-03-02 16:35:29] 2026-03-02 15:34:48,687 | INFO     | . initial setup = 5 s
[2026-03-02 16:35:29] 2026-03-02 15:34:48,687 | INFO     | . payload setup = 6 s
[2026-03-02 16:35:29] 2026-03-02 15:34:48,687 | INFO     | . stage-in = 0 s
[2026-03-02 16:35:29] 2026-03-02 15:34:48,687 | INFO     | . payload execution = 13701 s
[2026-03-02 16:35:29] 2026-03-02 15:34:48,687 | INFO     | . stage-out = 1 s
[2026-03-02 16:35:29] 2026-03-02 15:34:48,688 | INFO     | . log creation = 0 s
[2026-03-02 16:35:29] 2026-03-02 15:34:48,688 | INFO     | ..............................
[2026-03-02 16:35:29] 2026-03-02 15:34:49,273 | INFO     | 
[2026-03-02 16:35:29] 2026-03-02 15:34:49,273 | INFO     | job summary report
[2026-03-02 16:35:29] 2026-03-02 15:34:49,273 | INFO     | --------------------------------------------------
[2026-03-02 16:35:29] 2026-03-02 15:34:49,274 | INFO     | PanDA job id: 7035544235
[2026-03-02 16:35:29] 2026-03-02 15:34:49,274 | INFO     | task id: 48838581
[2026-03-02 16:35:29] 2026-03-02 15:34:49,274 | INFO     | errors: (none)
[2026-03-02 16:35:29] 2026-03-02 15:34:49,274 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-02 16:35:29] 2026-03-02 15:34:49,274 | INFO     | pilot state: finished 
[2026-03-02 16:35:29] 2026-03-02 15:34:49,274 | INFO     | transexitcode: 0
[2026-03-02 16:35:29] 2026-03-02 15:34:49,274 | INFO     | exeerrorcode: 0
[2026-03-02 16:35:29] 2026-03-02 15:34:49,274 | INFO     | exeerrordiag: 
[2026-03-02 16:35:29] 2026-03-02 15:34:49,274 | INFO     | exitcode: 0
[2026-03-02 16:35:29] 2026-03-02 15:34:49,274 | INFO     | exitmsg: OK
[2026-03-02 16:35:29] 2026-03-02 15:34:49,274 | INFO     | cpuconsumptiontime: 52668 s
[2026-03-02 16:35:29] 2026-03-02 15:34:49,274 | INFO     | nevents: 400
[2026-03-02 16:35:29] 2026-03-02 15:34:49,274 | INFO     | neventsw: 0
[2026-03-02 16:35:29] 2026-03-02 15:34:49,275 | INFO     | pid: 3833984
[2026-03-02 16:35:29] 2026-03-02 15:34:49,275 | INFO     | pgrp: 3833984
[2026-03-02 16:35:29] 2026-03-02 15:34:49,275 | INFO     | corecount: 4
[2026-03-02 16:35:29] 2026-03-02 15:34:49,275 | INFO     | event service: False
[2026-03-02 16:35:29] 2026-03-02 15:34:49,275 | INFO     | sizes: {0: 2281878, 1: 2282339, 12: 2282339, 13711: 2312652, 13713: 2321728, 13716: 2321866}
[2026-03-02 16:35:29] 2026-03-02 15:34:49,275 | INFO     | --------------------------------------------------
[2026-03-02 16:35:29] 2026-03-02 15:34:49,275 | INFO     | 
[2026-03-02 16:35:29] 2026-03-02 15:34:49,275 | INFO     | executing command: ls -lF /scratch/boinc/var/slot28/slots/0
[2026-03-02 16:35:29] 2026-03-02 15:34:49,295 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-02 16:35:29] 2026-03-02 15:34:49,296 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-02 16:35:29] 2026-03-02 15:34:49,296 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-02 16:35:29] 2026-03-02 15:34:49,296 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-02 16:35:29] 2026-03-02 15:34:49,296 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-02 16:35:29] 2026-03-02 15:34:49,296 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-02 16:35:29] 2026-03-02 15:34:49,296 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-02 16:35:29] 2026-03-02 15:34:49,296 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-02 16:35:29] 2026-03-02 15:34:49,296 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-02 16:35:29] 2026-03-02 15:34:49,296 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-02 16:35:29] 2026-03-02 15:34:49,297 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-02 16:35:29] 2026-03-02 15:34:49,297 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-02 16:35:29] 2026-03-02 15:34:49,297 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-02 16:35:29] 2026-03-02 15:34:49,297 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-02 16:35:29] 2026-03-02 15:34:49,297 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-02 16:35:29] 2026-03-02 15:34:49,297 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-02 16:35:29] 2026-03-02 15:34:49,297 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-02 16:35:29] 2026-03-02 15:34:49,297 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-02 16:35:29] 2026-03-02 15:34:49,297 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-02 16:35:29] 2026-03-02 15:34:49,297 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-02 16:35:29] 2026-03-02 15:34:49,298 | INFO     | job 7035544235 has completed (purged errors)
[2026-03-02 16:35:29] 2026-03-02 15:34:49,298 | INFO     | overall cleanup function is called
[2026-03-02 16:35:29] 2026-03-02 15:34:50,304 | INFO     | --- collectZombieJob: --- 10, [3833984]
[2026-03-02 16:35:29] 2026-03-02 15:34:50,304 | INFO     | zombie collector waiting for pid 3833984
[2026-03-02 16:35:29] 2026-03-02 15:34:50,304 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-02 16:35:29] 2026-03-02 15:34:50,305 | INFO     | collected zombie processes
[2026-03-02 16:35:29] 2026-03-02 15:34:50,305 | INFO     | will attempt to kill all subprocesses of pid=3833984
[2026-03-02 16:35:29] 2026-03-02 15:34:50,648 | INFO     | process IDs to be killed: [3833984] (in reverse order)
[2026-03-02 16:35:29] 2026-03-02 15:34:50,763 | WARNING  | found no corresponding commands to process id(s)
[2026-03-02 16:35:29] 2026-03-02 15:34:50,764 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-02 16:35:29] 2026-03-02 15:34:50,776 | INFO     | did not find any defunct processes belonging to 3833984
[2026-03-02 16:35:29] 2026-03-02 15:34:50,789 | INFO     | did not find any defunct processes belonging to 3833984
[2026-03-02 16:35:29] 2026-03-02 15:34:50,789 | INFO     | ready for new job
[2026-03-02 16:35:29] 2026-03-02 15:34:50,789 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-02 16:35:29] 2026-03-02 15:34:50,792 | INFO     | **************************************
[2026-03-02 16:35:29] 2026-03-02 15:34:50,792 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-02 16:35:29] 2026-03-02 15:34:50,792 | INFO     | **************************************
[2026-03-02 16:35:29] 2026-03-02 15:34:50,792 | INFO     | 
[2026-03-02 16:35:29] 2026-03-02 15:34:50,796 | INFO     | architecture information:
[2026-03-02 16:35:29] 2026-03-02 15:34:50,796 | INFO     | executing command: cat /etc/os-release
[2026-03-02 16:35:29] 2026-03-02 15:34:50,811 | INFO     | cat /etc/os-release:
[2026-03-02 16:35:29] NAME="CentOS Linux"
[2026-03-02 16:35:29] VERSION="7 (Core)"
[2026-03-02 16:35:29] ID="centos"
[2026-03-02 16:35:29] ID_LIKE="rhel fedora"
[2026-03-02 16:35:29] VERSION_ID="7"
[2026-03-02 16:35:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-02 16:35:29] ANSI_COLOR="0;31"
[2026-03-02 16:35:29] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-02 16:35:29] HOME_URL="https://www.centos.org/"
[2026-03-02 16:35:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-02 16:35:29] 
[2026-03-02 16:35:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-02 16:35:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-02 16:35:29] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-02 16:35:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-02 16:35:29] 
[2026-03-02 16:35:29] 2026-03-02 15:34:50,812 | INFO     | **************************************
[2026-03-02 16:35:29] 2026-03-02 15:34:51,315 | INFO     | executing command: df -mP /scratch/boinc/var/slot28/slots/0
[2026-03-02 16:35:29] 2026-03-02 15:34:51,330 | INFO     | sufficient remaining disk space (668082372608 B)
[2026-03-02 16:35:29] 2026-03-02 15:34:51,331 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-02 16:35:29] 2026-03-02 15:34:51,331 | INFO     | current server update state: UPDATING_FINAL
[2026-03-02 16:35:29] 2026-03-02 15:34:51,331 | INFO     | update_server=False
[2026-03-02 16:35:29] 2026-03-02 15:34:51,331 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-02 16:35:29] 2026-03-02 15:34:51,334 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-02 16:35:29] 2026-03-02 15:34:51,575 | INFO     | all payload control threads have been joined
[2026-03-02 16:35:29] 2026-03-02 15:34:51,730 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-02 16:35:29] 2026-03-02 15:34:51,730 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-02 16:35:29] 2026-03-02 15:34:51,731 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-02 16:35:29] 2026-03-02 15:34:51,731 | INFO     | will abort loop
[2026-03-02 16:35:29] 2026-03-02 15:34:51,925 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-02 16:35:29] 2026-03-02 15:34:51,978 | INFO     | all job control threads have been joined
[2026-03-02 16:35:29] 2026-03-02 15:34:51,983 | INFO     | all data control threads have been joined
[2026-03-02 16:35:29] 2026-03-02 15:34:52,336 | INFO     | [job] retrieve thread has finished
[2026-03-02 16:35:29] 2026-03-02 15:34:52,351 | INFO     | [payload] execute_payloads thread has finished
[2026-03-02 16:35:29] 2026-03-02 15:34:52,581 | INFO     | [payload] control thread has finished
[2026-03-02 16:35:29] 2026-03-02 15:34:52,735 | INFO     | [job] job monitor thread has finished
[2026-03-02 16:35:29] 2026-03-02 15:34:52,934 | INFO     | [job] validate thread has finished
[2026-03-02 16:35:29] 2026-03-02 15:34:52,984 | INFO     | [job] control thread has finished
[2026-03-02 16:35:29] 2026-03-02 15:34:52,989 | INFO     | [data] control thread has finished
[2026-03-02 16:35:29] 2026-03-02 15:34:53,215 | INFO     | [payload] validate_post thread has finished
[2026-03-02 16:35:29] 2026-03-02 15:34:53,339 | INFO     | [data] copytool_out thread has finished
[2026-03-02 16:35:29] 2026-03-02 15:34:53,434 | INFO     | [data] copytool_in thread has finished
[2026-03-02 16:35:29] 2026-03-02 15:34:53,554 | INFO     | [job] create_data_payload thread has finished
[2026-03-02 16:35:29] 2026-03-02 15:34:53,595 | INFO     | [payload] validate_pre thread has finished
[2026-03-02 16:35:29] 2026-03-02 15:34:53,785 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-02 16:35:29] 2026-03-02 15:34:53,850 | INFO     | [payload] failed_post thread has finished
[2026-03-02 16:35:29] 2026-03-02 15:34:54,791 | INFO     | [job] queue monitor thread has finished
[2026-03-02 16:35:29] 2026-03-02 15:34:55,930 | INFO     | [data] queue_monitor thread has finished
[2026-03-02 16:35:29] 2026-03-02 15:35:01,598 | INFO     | job.realtimelogging is not enabled
[2026-03-02 16:35:29] 2026-03-02 15:35:02,603 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-02 16:35:29] 2026-03-02 15:35:21,940 | INFO     | PID=3829194 has CPU usage=7.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-02 16:35:29] 2026-03-02 15:35:21,940 | INFO     | .. there are 11 such processes running
[2026-03-02 16:35:29] 2026-03-02 15:35:21,941 | INFO     | found 0 job(s) in 20 queues
[2026-03-02 16:35:29] 2026-03-02 15:35:21,941 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-02 16:35:29] 2026-03-02 15:35:21,941 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-02 16:35:29] 2026-03-02 15:35:23,434 | INFO     | [monitor] cgroup control has ended
[2026-03-02 16:35:29] 2026-03-02 15:35:24,052 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23200200312640)>', '<ExcThread(monitor, started 23199961327360)>']
[2026-03-02 16:35:29] 2026-03-02 15:35:24,950 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-02 16:35:29] 2026-03-02 15:35:24,950 | INFO     | [monitor] control thread has ended
[2026-03-02 16:35:29] 2026-03-02 15:35:29,077 | INFO     | all workflow threads have been joined
[2026-03-02 16:35:29] 2026-03-02 15:35:29,077 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-02 16:35:29] 2026-03-02 15:35:29,078 | INFO     | traces error code: 0
[2026-03-02 16:35:29] 2026-03-02 15:35:29,078 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-02 16:35:29] 2026-03-02 15:35:29,234 [wrapper] ==== pilot stdout END ====
[2026-03-02 16:35:29] 2026-03-02 15:35:29,236 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-02 16:35:29] 2026-03-02 15:35:29,238 [wrapper] pilotpid: 3829194
[2026-03-02 16:35:29] 2026-03-02 15:35:29,240 [wrapper] Pilot exit status: 0
[2026-03-02 16:35:29] 2026-03-02 15:35:29,250 [wrapper] pandaids: 7035544235
[2026-03-02 16:35:29] 2026-03-02 15:35:29,314 [wrapper] cleanup supervisor_pilot 4069648 3829195
[2026-03-02 16:35:29] 2026-03-02 15:35:29,317 [wrapper] Test setup, not cleaning
[2026-03-02 16:35:29] 2026-03-02 15:35:29,319 [wrapper] apfmon messages muted
[2026-03-02 16:35:29] 2026-03-02 15:35:29,322 [wrapper] ==== wrapper stdout END ====
[2026-03-02 16:35:29] 2026-03-02 15:35:29,325 [wrapper] ==== wrapper stderr END ====
[2026-03-02 16:35:29]  *** Error codes and diagnostics ***
[2026-03-02 16:35:29]     "exeErrorCode": 0,
[2026-03-02 16:35:29]     "exeErrorDiag": "",
[2026-03-02 16:35:29]     "pilotErrorCode": 0,
[2026-03-02 16:35:29]     "pilotErrorDiag": "",
[2026-03-02 16:35:29]  *** Listing of results directory ***
[2026-03-02 16:35:29] total 511580
[2026-03-02 16:35:29] -rwx------ 1 boinc boinc     36322 Mar  1 20:56 runpilot2-wrapper.sh
[2026-03-02 16:35:29] -rw-r--r-- 1 boinc boinc    584627 Mar  1 20:56 pilot3.tar.gz
[2026-03-02 16:35:29] -rw-r--r-- 1 boinc boinc      5111 Mar  1 20:57 queuedata.json
[2026-03-02 16:35:29] -rw-r--r-- 1 boinc boinc       100 Mar  2 12:45 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-02 16:35:29] -rwxr-xr-x 1 boinc boinc      7986 Mar  2 12:45 run_atlas
[2026-03-02 16:35:29] -rw-r--r-- 1 boinc boinc       105 Mar  2 12:45 job.xml
[2026-03-02 16:35:29] -rw-r--r-- 1 boinc boinc      6639 Mar  2 12:45 init_data.xml
[2026-03-02 16:35:29] -rw-r--r-- 2 boinc boinc 287812588 Mar  2 12:45 EVNT.48220205._000150.pool.root.1
[2026-03-02 16:35:29] -rw-r--r-- 2 boinc boinc     15845 Mar  2 12:45 start_atlas.sh
[2026-03-02 16:35:29] drwxrwx--x 2 boinc boinc      4096 Mar  2 12:45 shared
[2026-03-02 16:35:29] -rw-r--r-- 2 boinc boinc    597965 Mar  2 12:45 input.tar.gz
[2026-03-02 16:35:29] -rw-r--r-- 1 boinc boinc         0 Mar  2 12:45 boinc_lockfile
[2026-03-02 16:35:29] -rw-r--r-- 1 boinc boinc      2588 Mar  2 12:45 pandaJob.out
[2026-03-02 16:35:29] -rw------- 1 boinc boinc    998151 Mar  2 12:45 agis_schedconf.cvmfs.json
[2026-03-02 16:35:29] -rw------- 1 boinc boinc       452 Mar  2 12:45 workernode_map.json
[2026-03-02 16:35:29] drwx------ 5 boinc boinc      4096 Mar  2 12:46 pilot3
[2026-03-02 16:35:29] -rw------- 1 boinc boinc 227450521 Mar  2 16:34 HITS.48838581._003527.pool.root.1
[2026-03-02 16:35:29] -rw-r--r-- 1 boinc boinc       530 Mar  2 16:34 boinc_task_state.xml
[2026-03-02 16:35:29] -rw------- 1 boinc boinc      1033 Mar  2 16:34 memory_monitor_summary.json
[2026-03-02 16:35:29] -rw------- 1 boinc boinc   1512931 Mar  2 16:34 agis_ddmendpoints.agis.ALL.json
[2026-03-02 16:35:29] -rw------- 1 boinc boinc    396421 Mar  2 16:34 log.48838581._003527.job.log.tgz.1
[2026-03-02 16:35:29] -rw------- 1 boinc boinc      6402 Mar  2 16:34 heartbeat.json
[2026-03-02 16:35:29] -rw------- 1 boinc boinc        95 Mar  2 16:35 pilot_heartbeat.json
[2026-03-02 16:35:29] -rw-r--r-- 1 boinc boinc      8192 Mar  2 16:35 boinc_mmap_file
[2026-03-02 16:35:29] -rw-r--r-- 1 boinc boinc        28 Mar  2 16:35 wrapper_checkpoint.txt
[2026-03-02 16:35:29] -rw------- 1 boinc boinc      5088 Mar  2 16:35 pilotlog.txt
[2026-03-02 16:35:29] -rw------- 1 boinc boinc   1939408 Mar  2 16:35 log.48838581._003527.job.log.1
[2026-03-02 16:35:29] -rw------- 1 boinc boinc       357 Mar  2 16:35 output.list
[2026-03-02 16:35:29] -rw-r--r-- 1 boinc boinc       620 Mar  2 16:35 runtime_log
[2026-03-02 16:35:29] -rw------- 1 boinc boinc   2355200 Mar  2 16:35 result.tar.gz
[2026-03-02 16:35:29] -rw-r--r-- 1 boinc boinc      9205 Mar  2 16:35 runtime_log.err
[2026-03-02 16:35:29] -rw------- 1 boinc boinc       665 Mar  2 16:35 9TNKDms41G9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmJbBLDmDsduTo.diag
[2026-03-02 16:35:29] -rw-r--r-- 1 boinc boinc     20813 Mar  2 16:35 stderr.txt
[2026-03-02 16:35:29] HITS file was successfully produced:
[2026-03-02 16:35:29] -rw------- 1 boinc boinc 227450521 Mar  2 16:34 shared/HITS.pool.root.1
[2026-03-02 16:35:29]  *** Contents of shared directory: ***
[2026-03-02 16:35:29] total 506092
[2026-03-02 16:35:29] -rw-r--r-- 2 boinc boinc 287812588 Mar  2 12:45 ATLAS.root_0
[2026-03-02 16:35:29] -rw-r--r-- 2 boinc boinc     15845 Mar  2 12:45 start_atlas.sh
[2026-03-02 16:35:29] -rw-r--r-- 2 boinc boinc    597965 Mar  2 12:45 input.tar.gz
[2026-03-02 16:35:29] -rw------- 1 boinc boinc 227450521 Mar  2 16:34 HITS.pool.root.1
[2026-03-02 16:35:29] -rw------- 1 boinc boinc   2355200 Mar  2 16:35 result.tar.gz
16:35:30 (3825437): run_atlas exited; CPU time 53208.890939
16:35:30 (3825437): called boinc_finish(0)

</stderr_txt>
]]>

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