Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
18:35:43 (523002): wrapper (7.7.26015): starting
18:35:43 (523002): wrapper: running run_atlas (--nthreads 12)
[2026-03-01 18:35:43] Arguments: --nthreads 12
[2026-03-01 18:35:43] Threads: 12
[2026-03-01 18:35:43] Checking for CVMFS
[2026-03-01 18:35:44] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-01 18:35:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-01 18:35:54] Running cvmfs_config stat atlas.cern.ch
[2026-03-01 18:35:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-01 18:35:55] 2.11.5.0 4071029 130819 338580 156791 3 277 24986119 45568001 23899 130560 0 1157479444 99.810 646381734 21039 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2026-03-01 18:35:55] CVMFS is ok
[2026-03-01 18:35:55] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-01 18:35:55] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-01 18:35:55] Further information can be found at the LHC@home message board.
[2026-03-01 18:35:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-01 18:35:55] Checking for apptainer binary...
[2026-03-01 18:35:55] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-01 18:35:55] Running /usr/bin/apptainer --version
[2026-03-01 18:35:55] apptainer version 1.4.1-1.el9
[2026-03-01 18:35:55] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-01 18:35:56] wns0029.triumf.lcg
[2026-03-01 18:35:56] apptainer works
[2026-03-01 18:35:56] Set ATHENA_PROC_NUMBER=12
[2026-03-01 18:35:56] Set ATHENA_CORE_NUMBER=12
[2026-03-01 18:35:56] Starting ATLAS job with PandaID=7035659615
[2026-03-01 18:35:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-01 18:40:53]  *** The last 200 lines of the pilot log: ***
[2026-03-01 18:40:53] 2026-03-02 02:39:57,917 | WARNING  | found no stored workdir sizes
[2026-03-01 18:40:53] 2026-03-02 02:39:57,917 | INFO     | will not add max space = 0 B to job metrics
[2026-03-01 18:40:53] 2026-03-02 02:39:57,917 | WARNING  | wrong length of table data, x=[1772419051.0], y=[1845.0] (must be same and length>=4)
[2026-03-01 18:40:53] 2026-03-02 02:39:57,917 | INFO     | could have reported an average CPU frequency of 2666 MHz (4 samples)
[2026-03-01 18:40:53] 2026-03-02 02:39:57,918 | INFO     | ..............................
[2026-03-01 18:40:53] 2026-03-02 02:39:57,918 | INFO     | . Timing measurements:
[2026-03-01 18:40:53] 2026-03-02 02:39:57,918 | INFO     | . get job = 0 s
[2026-03-01 18:40:53] 2026-03-02 02:39:57,918 | INFO     | . initial setup = 21 s
[2026-03-01 18:40:53] 2026-03-02 02:39:57,918 | INFO     | . payload setup = 13 s
[2026-03-01 18:40:53] 2026-03-02 02:39:57,918 | INFO     | . stage-in = 0 s
[2026-03-01 18:40:53] 2026-03-02 02:39:57,918 | INFO     | . payload execution = 40 s
[2026-03-01 18:40:53] 2026-03-02 02:39:57,918 | INFO     | . stage-out = 1 s
[2026-03-01 18:40:53] 2026-03-02 02:39:57,918 | INFO     | . log creation = 0 s
[2026-03-01 18:40:53] 2026-03-02 02:39:57,918 | INFO     | ..............................
[2026-03-01 18:40:53] 2026-03-02 02:39:57,918 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-03-01 18:40:53] 2026-03-02 02:39:57,918 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7035659615/pilotlog.txt
[2026-03-01 18:40:53] 2026-03-02 02:39:57,957 | INFO     | time since job start (192s) is within the limit (349056.0s)
[2026-03-01 18:40:53] 2026-03-02 02:39:58,073 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-03-01 18:40:53] - Log from pilotlog.txt -
[2026-03-01 18:40:53] 2026-03-02 02:39:57,916 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-01 18:40:53] 2026-03-02 02:39:57,917 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-01 18:40:53] 2026-03-02 02:39:57,917 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-01 18:40:53] 2026-03-02 02:39:57,917 | WARNING  | found no stored workdir sizes
[2026-03-01 18:40:53] 2026-03-02 02:39:57,917 | INFO     | will not add max space = 0 B to job metrics
[2026-03-01 18:40:53] 2026-03-02 02:39:57,917 | WARNING  | wrong length of table data, x=[1772419051.0], y=[1845.0] (must be same and length>=4)
[2026-03-01 18:40:53] 2026-03-02 02:39:57,917 | INFO     | could have reported an average CPU frequency of 2666 MHz (4 samples)
[2026-03-01 18:40:53] 2026-03-02 02:39:57,918 | INFO     | ..............................
[2026-03-01 18:40:53] 2026-03-02 02:39:57,918 | INFO     | . Timing measurements:
[2026-03-01 18:40:53] 2026-03-02 02:39:57,918 | INFO     | . get job = 0 s
[2026-03-01 18:40:53] 2026-03-02 02:39:57,918 | INFO     | . initial setup = 21 s
[2026-03-01 18:40:53] 2026-03-02 02:39:57,918 | INFO     | . payload setup = 13 s
[2026-03-01 18:40:53] 2026-03-02 02:39:57,918 | INFO     | . stage-in = 0 s
[2026-03-01 18:40:53] 2026-03-02 02:39:57,918 | INFO     | . payload execution = 40 s
[2026-03-01 18:40:53] 2026-03-02 02:39:57,918 | INFO     | . stage-out = 1 s
[2026-03-01 18:40:53] 2026-03-02 02:39:57,918 | INFO     | . log creation = 0 s
[2026-03-01 18:40:53] 2026-03-02 02:39:57,918 | INFO     | ..............................
[2026-03-01 18:40:53] 2026-03-02 02:39:57,918 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-03-01 18:40:53] 2026-03-02 02:39:57,918 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7035659615/pilotlog.txt
[2026-03-01 18:40:53] 2026-03-02 02:39:57,957 | INFO     | time since job start (192s) is within the limit (349056.0s)
[2026-03-01 18:40:53] 2026-03-02 02:39:58,073 | WARNING  | 
[2026-03-01 18:40:53] [begin log extracts]
[2026-03-01 18:40:53] - Log from pilotlog.txt -
[2026-03-01 18:40:53] 2026-03-02 02:39:57,916 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-01 18:40:53] 2026-03-02 02:39:57,917 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-01 18:40:53] 2026-03-02 02:39:57,917 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-01 18:40:53] 2026-03-02 02:39:57,917 | WARNING  | found no stored workdir sizes
[2026-03-01 18:40:53] 2026-03-02 02:39:57,917 | INFO     | will not add max space = 0 B to job metrics
[2026-03-01 18:40:53] 2026-03-02 02:39:57,917 | WARNING  | wrong length of table data, x=[1772419051.0], y=[1845.0] (must be same and length>=4)
[2026-03-01 18:40:53] 2026-03-02 02:39:57,917 | INFO     | could have reported an average CPU frequency of 2666 MHz (4 samples)
[2026-03-01 18:40:53] 2026-03-02 02:39:57,918 | INFO     | ..............................
[2026-03-01 18:40:53] 2026-03-02 02:39:57,918 | INFO     | . Timing measurements:
[2026-03-01 18:40:53] 2026-03-02 02:39:57,918 | INFO     | . get job = 0 s
[2026-03-01 18:40:53] 2026-03-02 02:39:57,918 | INFO     | . initial setup = 21 s
[2026-03-01 18:40:53] 2026-03-02 02:39:57,918 | INFO     | . payload setup = 13 s
[2026-03-01 18:40:53] 2026-03-02 02:39:57,918 | INFO     | . stage-in = 0 s
[2026-03-01 18:40:53] 2026-03-02 02:39:57,918 | INFO     | . payload execution = 40 s
[2026-03-01 18:40:53] 2026-03-02 02:39:57,918 | INFO     | . stage-out = 1 s
[2026-03-01 18:40:53] 2026-03-02 02:39:57,918 | INFO     | . log creation = 0 s
[2026-03-01 18:40:53] 2026-03-02 02:39:57,918 | INFO     | ..............................
[2026-03-01 18:40:53] 2026-03-02 02:39:57,918 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-03-01 18:40:53] 2026-03-02 02:39:57,918 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7035659615/pilotlog.txt
[2026-03-01 18:40:53] 2026-03-02 02:39:57,957 | INFO     | time since job start (192s) is within the limit (349056.0s)
[2026-03-01 18:40:53] [end log extracts]
[2026-03-01 18:40:53] 2026-03-02 02:39:58,074 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2026-03-01 18:40:53] 2026-03-02 02:39:58,074 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2026-03-01 18:40:53] 2026-03-02 02:39:58,728 | INFO     | 
[2026-03-01 18:40:53] 2026-03-02 02:39:58,728 | INFO     | job summary report
[2026-03-01 18:40:53] 2026-03-02 02:39:58,728 | INFO     | --------------------------------------------------
[2026-03-01 18:40:53] 2026-03-02 02:39:58,729 | INFO     | PanDA job id: 7035659615
[2026-03-01 18:40:53] 2026-03-02 02:39:58,729 | INFO     | task id: 48838432
[2026-03-01 18:40:53] 2026-03-02 02:39:58,729 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-03-01 18:37:47,352 CRITICAL Transform executor raised TransformValidationExceptio
[2026-03-01 18:40:53] 2026-03-02 02:39:58,729 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-01 18:40:53] 2026-03-02 02:39:58,729 | INFO     | pilot state: failed 
[2026-03-01 18:40:53] 2026-03-02 02:39:58,729 | INFO     | transexitcode: 65
[2026-03-01 18:40:53] 2026-03-02 02:39:58,729 | INFO     | exeerrorcode: 65
[2026-03-01 18:40:53] 2026-03-02 02:39:58,729 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2026-03-01 18:40:53] 2026-03-02 02:39:58,729 | INFO     | exitcode: 65
[2026-03-01 18:40:53] 2026-03-02 02:39:58,729 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2026-03-01 18:40:53] 2026-03-02 02:39:58,729 | INFO     | cpuconsumptiontime: 14 s
[2026-03-01 18:40:53] 2026-03-02 02:39:58,729 | INFO     | nevents: 0
[2026-03-01 18:40:53] 2026-03-02 02:39:58,729 | INFO     | neventsw: 0
[2026-03-01 18:40:53] 2026-03-02 02:39:58,729 | INFO     | pid: 531729
[2026-03-01 18:40:53] 2026-03-02 02:39:58,729 | INFO     | pgrp: 531729
[2026-03-01 18:40:53] 2026-03-02 02:39:58,729 | INFO     | corecount: 12
[2026-03-01 18:40:53] 2026-03-02 02:39:58,729 | INFO     | event service: False
[2026-03-01 18:40:53] 2026-03-02 02:39:58,729 | INFO     | sizes: {0: 2281856, 1: 2282317, 12: 2282317, 58: 2305543, 59: 2305519, 61: 2309839, 63: 2309995, 180: 2310161}
[2026-03-01 18:40:53] 2026-03-02 02:39:58,729 | INFO     | --------------------------------------------------
[2026-03-01 18:40:53] 2026-03-02 02:39:58,729 | INFO     | 
[2026-03-01 18:40:53] 2026-03-02 02:39:58,729 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2026-03-01 18:40:53] 2026-03-02 02:39:58,748 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-01 18:40:53] 2026-03-02 02:39:58,749 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-01 18:40:53] 2026-03-02 02:39:58,749 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-01 18:40:53] 2026-03-02 02:39:58,749 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-01 18:40:53] 2026-03-02 02:39:58,749 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-01 18:40:53] 2026-03-02 02:39:58,749 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-01 18:40:53] 2026-03-02 02:39:58,749 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-01 18:40:53] 2026-03-02 02:39:58,749 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-01 18:40:53] 2026-03-02 02:39:58,749 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-01 18:40:53] 2026-03-02 02:39:58,749 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-01 18:40:53] 2026-03-02 02:39:58,749 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-01 18:40:53] 2026-03-02 02:39:58,749 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-01 18:40:53] 2026-03-02 02:39:58,749 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-01 18:40:53] 2026-03-02 02:39:58,749 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-01 18:40:53] 2026-03-02 02:39:58,749 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-01 18:40:53] 2026-03-02 02:39:58,749 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-01 18:40:53] 2026-03-02 02:39:58,749 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-01 18:40:53] 2026-03-02 02:39:58,749 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-01 18:40:53] 2026-03-02 02:39:58,750 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-01 18:40:53] 2026-03-02 02:39:58,750 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-01 18:40:53] 2026-03-02 02:39:58,750 | INFO     | job 7035659615 has completed (purged errors)
[2026-03-01 18:40:53] 2026-03-02 02:39:58,750 | INFO     | overall cleanup function is called
[2026-03-01 18:40:53] 2026-03-02 02:39:59,756 | INFO     | --- collectZombieJob: --- 10, [531729]
[2026-03-01 18:40:53] 2026-03-02 02:39:59,756 | INFO     | zombie collector waiting for pid 531729
[2026-03-01 18:40:53] 2026-03-02 02:39:59,756 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-01 18:40:53] 2026-03-02 02:39:59,756 | INFO     | collected zombie processes
[2026-03-01 18:40:53] 2026-03-02 02:39:59,756 | INFO     | will attempt to kill all subprocesses of pid=531729
[2026-03-01 18:40:53] 2026-03-02 02:40:01,162 | INFO     | process IDs to be killed: [531729] (in reverse order)
[2026-03-01 18:40:53] 2026-03-02 02:40:01,565 | WARNING  | found no corresponding commands to process id(s)
[2026-03-01 18:40:53] 2026-03-02 02:40:01,566 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-01 18:40:53] 2026-03-02 02:40:01,595 | INFO     | did not find any defunct processes belonging to 531729
[2026-03-01 18:40:53] 2026-03-02 02:40:01,636 | INFO     | did not find any defunct processes belonging to 531729
[2026-03-01 18:40:53] 2026-03-02 02:40:01,637 | INFO     | ready for new job
[2026-03-01 18:40:53] 2026-03-02 02:40:01,637 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-01 18:40:53] 2026-03-02 02:40:01,652 | INFO     | **************************************
[2026-03-01 18:40:53] 2026-03-02 02:40:01,653 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-01 18:40:53] 2026-03-02 02:40:01,653 | INFO     | **************************************
[2026-03-01 18:40:53] 2026-03-02 02:40:01,653 | INFO     | 
[2026-03-01 18:40:53] 2026-03-02 02:40:01,655 | INFO     | architecture information:
[2026-03-01 18:40:53] 2026-03-02 02:40:01,668 | INFO     | executing command: cat /etc/os-release
[2026-03-01 18:40:53] 2026-03-02 02:40:01,695 | INFO     | cat /etc/os-release:
[2026-03-01 18:40:53] NAME="CentOS Linux"
[2026-03-01 18:40:53] VERSION="7 (Core)"
[2026-03-01 18:40:53] ID="centos"
[2026-03-01 18:40:53] ID_LIKE="rhel fedora"
[2026-03-01 18:40:53] VERSION_ID="7"
[2026-03-01 18:40:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-01 18:40:53] ANSI_COLOR="0;31"
[2026-03-01 18:40:53] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-01 18:40:53] HOME_URL="https://www.centos.org/"
[2026-03-01 18:40:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-01 18:40:53] 
[2026-03-01 18:40:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-01 18:40:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-01 18:40:53] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-01 18:40:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-01 18:40:53] 
[2026-03-01 18:40:53] 2026-03-02 02:40:01,695 | INFO     | **************************************
[2026-03-01 18:40:53] 2026-03-02 02:40:02,198 | INFO     | executing command: df -mP /home/boinc/slots/0
[2026-03-01 18:40:53] 2026-03-02 02:40:02,229 | INFO     | sufficient remaining disk space (1940341653504 B)
[2026-03-01 18:40:53] 2026-03-02 02:40:02,230 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-01 18:40:53] 2026-03-02 02:40:02,230 | INFO     | current server update state: UPDATING_FINAL
[2026-03-01 18:40:53] 2026-03-02 02:40:02,230 | INFO     | update_server=False
[2026-03-01 18:40:53] 2026-03-02 02:40:02,230 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-01 18:40:53] 2026-03-02 02:40:02,251 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-01 18:40:53] 2026-03-02 02:40:02,324 | INFO     | all data control threads have been joined
[2026-03-01 18:40:53] 2026-03-02 02:40:02,400 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-01 18:40:53] 2026-03-02 02:40:02,400 | INFO     | aborting loop
[2026-03-01 18:40:53] 2026-03-02 02:40:02,763 | INFO     | all job control threads have been joined
[2026-03-01 18:40:53] 2026-03-02 02:40:03,236 | INFO     | [job] retrieve thread has finished
[2026-03-01 18:40:53] 2026-03-02 02:40:03,267 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-01 18:40:53] 2026-03-02 02:40:03,300 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-01 18:40:53] 2026-03-02 02:40:03,326 | INFO     | [payload] validate_post thread has finished
[2026-03-01 18:40:53] 2026-03-02 02:40:03,330 | INFO     | [data] control thread has finished
[2026-03-01 18:40:53] 2026-03-02 02:40:03,406 | INFO     | [job] job monitor thread has finished
[2026-03-01 18:40:53] 2026-03-02 02:40:03,452 | INFO     | [payload] failed_post thread has finished
[2026-03-01 18:40:53] 2026-03-02 02:40:03,587 | INFO     | all payload control threads have been joined
[2026-03-01 18:40:53] 2026-03-02 02:40:03,769 | INFO     | [job] control thread has finished
[2026-03-01 18:40:53] 2026-03-02 02:40:03,798 | INFO     | [job] create_data_payload thread has finished
[2026-03-01 18:40:53] 2026-03-02 02:40:03,932 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-01 18:40:53] 2026-03-02 02:40:03,967 | INFO     | [payload] execute_payloads thread has finished
[2026-03-01 18:40:53] 2026-03-02 02:40:04,259 | INFO     | [data] copytool_out thread has finished
[2026-03-01 18:40:53] 2026-03-02 02:40:04,273 | INFO     | [job] queue monitor thread has finished
[2026-03-01 18:40:53] 2026-03-02 02:40:04,446 | INFO     | [job] validate thread has finished
[2026-03-01 18:40:53] 2026-03-02 02:40:04,552 | INFO     | [payload] validate_pre thread has finished
[2026-03-01 18:40:53] 2026-03-02 02:40:04,556 | INFO     | [data] copytool_in thread has finished
[2026-03-01 18:40:53] 2026-03-02 02:40:04,593 | INFO     | [payload] control thread has finished
[2026-03-01 18:40:53] 2026-03-02 02:40:07,941 | INFO     | [data] queue_monitor thread has finished
[2026-03-01 18:40:53] 2026-03-02 02:40:31,506 | INFO     | PID=527091 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-01 18:40:53] 2026-03-02 02:40:31,506 | INFO     | .. there are 35 such processes running
[2026-03-01 18:40:53] 2026-03-02 02:40:31,506 | INFO     | found 0 job(s) in 20 queues
[2026-03-01 18:40:53] 2026-03-02 02:40:31,507 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-01 18:40:53] 2026-03-02 02:40:31,507 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-01 18:40:53] 2026-03-02 02:40:45,026 | INFO     | [monitor] cgroup control has ended
[2026-03-01 18:40:53] 2026-03-02 02:40:46,662 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140536202209088)>', '<ExcThread(monitor, started 140535775860480)>']
[2026-03-01 18:40:53] 2026-03-02 02:40:47,614 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-01 18:40:53] 2026-03-02 02:40:47,614 | INFO     | [monitor] control thread has ended
[2026-03-01 18:40:53] 2026-03-02 02:40:51,688 | INFO     | all workflow threads have been joined
[2026-03-01 18:40:53] 2026-03-02 02:40:51,688 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-01 18:40:53] 2026-03-02 02:40:51,688 | INFO     | traces error code: 0
[2026-03-01 18:40:53] 2026-03-02 02:40:51,689 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-01 18:40:53] 2026-03-02 02:40:52,233 [wrapper] ==== pilot stdout END ====
[2026-03-01 18:40:53] 2026-03-02 02:40:52,263 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-01 18:40:53] 2026-03-02 02:40:52,306 [wrapper] pilotpid: 527091
[2026-03-01 18:40:53] 2026-03-02 02:40:52,326 [wrapper] Pilot exit status: 0
[2026-03-01 18:40:53] 2026-03-02 02:40:52,601 [wrapper] pandaids: 7035659615
[2026-03-01 18:40:53] 2026-03-02 02:40:52,715 [wrapper] cleanup supervisor_pilot  527099 527092
[2026-03-01 18:40:53] 2026-03-02 02:40:52,818 [wrapper] Test setup, not cleaning
[2026-03-01 18:40:53] 2026-03-02 02:40:52,828 [wrapper] apfmon messages muted
[2026-03-01 18:40:53] 2026-03-02 02:40:52,837 [wrapper] ==== wrapper stdout END ====
[2026-03-01 18:40:53] 2026-03-02 02:40:52,847 [wrapper] ==== wrapper stderr END ====
[2026-03-01 18:40:53]  *** Error codes and diagnostics ***
[2026-03-01 18:40:53]     "exeErrorCode": 65,
[2026-03-01 18:40:53]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2026-03-01 18:40:53]     "pilotErrorCode": 1305,
[2026-03-01 18:40:53]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2026-03-01 18:40:53]  *** Listing of results directory ***
[2026-03-01 18:40:53] total 284988
[2026-03-01 18:40:53] -rw-r--r--. 1 boinc boinc    584627 Mar  1 14:23 pilot3.tar.gz
[2026-03-01 18:40:53] -rwx------. 1 boinc boinc     36322 Mar  1 14:26 runpilot2-wrapper.sh
[2026-03-01 18:40:53] -rw-r--r--. 1 boinc boinc      5111 Mar  1 14:28 queuedata.json
[2026-03-01 18:40:53] -rw-r--r--. 1 boinc boinc       100 Mar  1 18:35 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-01 18:40:53] -rwxr-xr-x. 1 boinc boinc      7986 Mar  1 18:35 run_atlas
[2026-03-01 18:40:53] -rw-r--r--. 1 boinc boinc       105 Mar  1 18:35 job.xml
[2026-03-01 18:40:53] -rw-r--r--. 1 boinc boinc      6593 Mar  1 18:35 init_data.xml
[2026-03-01 18:40:53] -rw-r--r--. 2 boinc boinc 287691586 Mar  1 18:35 EVNT.48220101._000211.pool.root.1
[2026-03-01 18:40:53] -rw-r--r--. 2 boinc boinc     15845 Mar  1 18:35 start_atlas.sh
[2026-03-01 18:40:53] drwxrwx--x. 2 boinc boinc      4096 Mar  1 18:35 shared
[2026-03-01 18:40:53] -rw-r--r--. 2 boinc boinc    597974 Mar  1 18:35 input.tar.gz
[2026-03-01 18:40:53] -rw-r--r--. 1 boinc boinc         0 Mar  1 18:35 boinc_lockfile
[2026-03-01 18:40:53] -rw-r--r--. 1 boinc boinc      2580 Mar  1 18:35 pandaJob.out
[2026-03-01 18:40:53] -rw-------. 1 boinc boinc    998242 Mar  1 18:36 agis_schedconf.cvmfs.json
[2026-03-01 18:40:53] -rw-------. 1 boinc boinc   1513015 Mar  1 18:36 agis_ddmendpoints.agis.ALL.json
[2026-03-01 18:40:53] -rw-------. 1 boinc boinc       444 Mar  1 18:36 workernode_map.json
[2026-03-01 18:40:53] drwx------. 5 boinc boinc      4096 Mar  1 18:36 pilot3
[2026-03-01 18:40:53] -rw-r--r--. 1 boinc boinc       524 Mar  1 18:37 boinc_task_state.xml
[2026-03-01 18:40:53] -rw-------. 1 boinc boinc       962 Mar  1 18:37 memory_monitor_summary.json
[2026-03-01 18:40:53] -rw-------. 1 boinc boinc     20757 Mar  1 18:37 log.48838432._005591.job.log.tgz.1
[2026-03-01 18:40:53] -rw-------. 1 boinc boinc      7007 Mar  1 18:39 heartbeat.json
[2026-03-01 18:40:53] -rw-------. 1 boinc boinc        95 Mar  1 18:40 pilot_heartbeat.json
[2026-03-01 18:40:53] -rw-r--r--. 1 boinc boinc      8192 Mar  1 18:40 boinc_mmap_file
[2026-03-01 18:40:53] -rw-------. 1 boinc boinc      4818 Mar  1 18:40 pilotlog.txt
[2026-03-01 18:40:53] -rw-r--r--. 1 boinc boinc        22 Mar  1 18:40 wrapper_checkpoint.txt
[2026-03-01 18:40:53] -rw-------. 1 boinc boinc     83739 Mar  1 18:40 log.48838432._005591.job.log.1
[2026-03-01 18:40:53] -rw-------. 1 boinc boinc       188 Mar  1 18:40 output.list
[2026-03-01 18:40:53] -rw-r--r--. 1 boinc boinc       620 Mar  1 18:40 runtime_log
[2026-03-01 18:40:53] -rw-------. 1 boinc boinc    122880 Mar  1 18:40 result.tar.gz
[2026-03-01 18:40:53] -rw-r--r--. 1 boinc boinc      8635 Mar  1 18:40 runtime_log.err
[2026-03-01 18:40:53] -rw-------. 1 boinc boinc       643 Mar  1 18:40 EItNDmVQ4G9n9Rq4apOajLDm4fhM0noT9bVooX4SDmqx9KDmp9IICo.diag
[2026-03-01 18:40:53] -rw-r--r--. 1 boinc boinc     21683 Mar  1 18:40 stderr.txt
[2026-03-01 18:40:53] No HITS result produced
[2026-03-01 18:40:53]  *** Contents of shared directory: ***
[2026-03-01 18:40:53] total 281676
[2026-03-01 18:40:53] -rw-r--r--. 2 boinc boinc 287691586 Mar  1 18:35 ATLAS.root_0
[2026-03-01 18:40:53] -rw-r--r--. 2 boinc boinc     15845 Mar  1 18:35 start_atlas.sh
[2026-03-01 18:40:53] -rw-r--r--. 2 boinc boinc    597974 Mar  1 18:35 input.tar.gz
[2026-03-01 18:40:53] -rw-------. 1 boinc boinc    122880 Mar  1 18:40 result.tar.gz
18:40:55 (523002): run_atlas exited; CPU time 21.663440
18:40:55 (523002): called boinc_finish(0)

</stderr_txt>
]]>

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