Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
02:09:06 (522043): wrapper (7.7.26015): starting
02:09:06 (522043): wrapper: running run_atlas (--nthreads 12)
[2026-03-02 02:09:06] Arguments: --nthreads 12
[2026-03-02 02:09:06] Threads: 12
[2026-03-02 02:09:06] Checking for CVMFS
[2026-03-02 02:09:06] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-02 02:09:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-02 02:09:08] Running cvmfs_config stat atlas.cern.ch
[2026-03-02 02:09:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-02 02:09:08] 2.13.3.0 2136 763 50652 156801 1 188 2551549 4096000 918 130560 0 1565439 99.986 162491 1608 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2026-03-02 02:09:08] CVMFS is ok
[2026-03-02 02:09:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-02 02:09:08] Small home clusters do not require a local http proxy but it is suggested if
[2026-03-02 02:09:08] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-03-02 02:09:08] Further information can be found at the LHC@home message board.
[2026-03-02 02:09:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-02 02:09:08] Checking for apptainer binary...
[2026-03-02 02:09:08] apptainer is not installed, using version from CVMFS
[2026-03-02 02:09:08] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-02 02:09:08] boinc
[2026-03-02 02:09:08] apptainer works
[2026-03-02 02:09:08] Set ATHENA_PROC_NUMBER=12
[2026-03-02 02:09:08] Set ATHENA_CORE_NUMBER=12
[2026-03-02 02:09:09] Starting ATLAS job with PandaID=7035353256
[2026-03-02 02:09:09] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-02 02:35:33]  *** The last 200 lines of the pilot log: ***
[2026-03-02 02:35:33]  is_altstaged=None
[2026-03-02 02:35:33]  is_tar=False
[2026-03-02 02:35:33]  lfn=log.48700858._001039.job.log.tgz.1
[2026-03-02 02:35:33]  mtime=0
[2026-03-02 02:35:33]  protocol_id=None
[2026-03-02 02:35:33]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-02 02:35:33]  replicas=None
[2026-03-02 02:35:33]  scope=mc23_13p6TeV
[2026-03-02 02:35:33]  status=None
[2026-03-02 02:35:33]  status_code=0
[2026-03-02 02:35:33]  storage_token=
[2026-03-02 02:35:33]  surl=/var/lib/boinc-client/slots/0/PanDA_Pilot-7035353256/log.48700858._001039.job.log.tgz.1
[2026-03-02 02:35:33]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f3/41/log.48700858._001039.job.log.tgz.1
[2026-03-02 02:35:33]  workdir=None
[2026-03-02 02:35:33] ]
[2026-03-02 02:35:33] 2026-03-02 10:34:38,755 | INFO     | transferring file log.48700858._001039.job.log.tgz.1 from /var/lib/boinc-client/slots/0/PanDA_Pilot-7035353256/log.48700858._001039.job.log.tgz.1 to /var/lib/boinc
[2026-03-02 02:35:33] 2026-03-02 10:34:38,755 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/0/PanDA_Pilot-7035353256/log.48700858._001039.job.log.tgz.1 /var/lib/boinc-client/slots/0/log.487008
[2026-03-02 02:35:33] 2026-03-02 10:34:38,769 | INFO     | adding to output.list: log.48700858._001039.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f3/41/log.48700858._001039.job.log.tg
[2026-03-02 02:35:33] 2026-03-02 10:34:38,770 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-02 02:35:33] 2026-03-02 10:34:38,770 | INFO     | summary of transferred files:
[2026-03-02 02:35:33] 2026-03-02 10:34:38,770 | INFO     |  -- lfn=log.48700858._001039.job.log.tgz.1, status_code=0, status=transferred
[2026-03-02 02:35:33] 2026-03-02 10:34:38,770 | INFO     | stage-out finished correctly
[2026-03-02 02:35:33] 2026-03-02 10:34:39,732 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-02 02:35:33] 2026-03-02 10:34:39,908 | INFO     | time since job start (1515s) is within the limit (349056.0s)
[2026-03-02 02:35:33] 2026-03-02 10:34:40,964 | WARNING  | process 530723 can no longer be monitored (due to stat problems) - aborting
[2026-03-02 02:35:33] 2026-03-02 10:34:40,964 | INFO     | using path: /var/lib/boinc-client/slots/0/PanDA_Pilot-7035353256/memory_monitor_summary.json (trf name=prmon)
[2026-03-02 02:35:33] 2026-03-02 10:34:40,978 | INFO     | job 7035353256 has state=finished
[2026-03-02 02:35:33] 2026-03-02 10:34:40,978 | INFO     | preparing for final server update for job 7035353256 in state='finished'
[2026-03-02 02:35:33] 2026-03-02 10:34:40,978 | INFO     | reading metadata from: /var/lib/boinc-client/slots/0/PanDA_Pilot-7035353256/jobReport.json
[2026-03-02 02:35:33] 2026-03-02 10:34:40,980 | INFO     | added worker_node to metadata from /var/lib/boinc-client/slots/0/workernode_map.json
[2026-03-02 02:35:33] 2026-03-02 10:34:40,981 | INFO     | this job has now completed (state=finished)
[2026-03-02 02:35:33] 2026-03-02 10:34:40,981 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-02 02:35:33] 2026-03-02 10:34:40,981 | INFO     | log transfer has been attempted: DONE
[2026-03-02 02:35:33] 2026-03-02 10:34:40,981 | INFO     | job 7035353256 has finished - writing final server update
[2026-03-02 02:35:33] 2026-03-02 10:34:40,981 | INFO     | total number of processed events: 400 (read)
[2026-03-02 02:35:33] 2026-03-02 10:34:40,985 | INFO     | using path: /var/lib/boinc-client/slots/0/PanDA_Pilot-7035353256/memory_monitor_summary.json (trf name=prmon)
[2026-03-02 02:35:33] 2026-03-02 10:34:40,986 | INFO     | extracted standard info from prmon json
[2026-03-02 02:35:33] 2026-03-02 10:34:40,986 | INFO     | extracted standard memory fields from prmon json
[2026-03-02 02:35:33] 2026-03-02 10:34:40,986 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-02 02:35:33] 2026-03-02 10:34:40,986 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-02 02:35:33] 2026-03-02 10:34:40,986 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-02 02:35:33] 2026-03-02 10:34:40,987 | INFO     | fitting pss+swap vs Time
[2026-03-02 02:35:33] 2026-03-02 10:34:40,987 | INFO     | sum of square deviations: 1802824.5
[2026-03-02 02:35:33] 2026-03-02 10:34:40,987 | INFO     | sum of deviations: -365654923.0
[2026-03-02 02:35:33] 2026-03-02 10:34:40,987 | INFO     | mean x: 1772447005.5
[2026-03-02 02:35:33] 2026-03-02 10:34:40,987 | INFO     | mean y: 2713445.4444444445
[2026-03-02 02:35:33] 2026-03-02 10:34:40,987 | INFO     | intersect: 359496370935.50134
[2026-03-02 02:35:33] 2026-03-02 10:34:40,987 | INFO     | chi2: 0.008928254394623936
[2026-03-02 02:35:33] 2026-03-02 10:34:40,987 | INFO     | current memory leak: -202.82 B/s (using 18 data points, chi2=0.01)
[2026-03-02 02:35:33] 2026-03-02 10:34:40,988 | INFO     | could have reported an average CPU frequency of 2893 MHz (4 samples)
[2026-03-02 02:35:33] 2026-03-02 10:34:40,988 | INFO     | ..............................
[2026-03-02 02:35:33] 2026-03-02 10:34:40,988 | INFO     | . Timing measurements:
[2026-03-02 02:35:33] 2026-03-02 10:34:40,988 | INFO     | . get job = 0 s
[2026-03-02 02:35:33] 2026-03-02 10:34:40,988 | INFO     | . initial setup = 6 s
[2026-03-02 02:35:33] 2026-03-02 10:34:40,988 | INFO     | . payload setup = 3 s
[2026-03-02 02:35:33] 2026-03-02 10:34:40,988 | INFO     | . stage-in = 0 s
[2026-03-02 02:35:33] 2026-03-02 10:34:40,988 | INFO     | . payload execution = 1496 s
[2026-03-02 02:35:33] 2026-03-02 10:34:40,989 | INFO     | . stage-out = 0 s
[2026-03-02 02:35:33] 2026-03-02 10:34:40,989 | INFO     | . log creation = 0 s
[2026-03-02 02:35:33] 2026-03-02 10:34:40,989 | INFO     | ..............................
[2026-03-02 02:35:33] 2026-03-02 10:34:41,031 | INFO     | 
[2026-03-02 02:35:33] 2026-03-02 10:34:41,031 | INFO     | job summary report
[2026-03-02 02:35:33] 2026-03-02 10:34:41,031 | INFO     | --------------------------------------------------
[2026-03-02 02:35:33] 2026-03-02 10:34:41,031 | INFO     | PanDA job id: 7035353256
[2026-03-02 02:35:33] 2026-03-02 10:34:41,031 | INFO     | task id: 48700858
[2026-03-02 02:35:33] 2026-03-02 10:34:41,031 | INFO     | errors: (none)
[2026-03-02 02:35:33] 2026-03-02 10:34:41,031 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-02 02:35:33] 2026-03-02 10:34:41,032 | INFO     | pilot state: finished 
[2026-03-02 02:35:33] 2026-03-02 10:34:41,032 | INFO     | transexitcode: 0
[2026-03-02 02:35:33] 2026-03-02 10:34:41,032 | INFO     | exeerrorcode: 0
[2026-03-02 02:35:33] 2026-03-02 10:34:41,032 | INFO     | exeerrordiag: 
[2026-03-02 02:35:33] 2026-03-02 10:34:41,032 | INFO     | exitcode: 0
[2026-03-02 02:35:33] 2026-03-02 10:34:41,032 | INFO     | exitmsg: OK
[2026-03-02 02:35:33] 2026-03-02 10:34:41,032 | INFO     | cpuconsumptiontime: 15839 s
[2026-03-02 02:35:33] 2026-03-02 10:34:41,032 | INFO     | nevents: 400
[2026-03-02 02:35:33] 2026-03-02 10:34:41,032 | INFO     | neventsw: 0
[2026-03-02 02:35:33] 2026-03-02 10:34:41,032 | INFO     | pid: 530723
[2026-03-02 02:35:33] 2026-03-02 10:34:41,032 | INFO     | pgrp: 530723
[2026-03-02 02:35:33] 2026-03-02 10:34:41,032 | INFO     | corecount: 12
[2026-03-02 02:35:33] 2026-03-02 10:34:41,032 | INFO     | event service: False
[2026-03-02 02:35:33] 2026-03-02 10:34:41,032 | INFO     | sizes: {0: 2282172, 10: 2282172, 1503: 2306955, 1504: 2315967, 1505: 2316023, 1506: 2316217}
[2026-03-02 02:35:33] 2026-03-02 10:34:41,032 | INFO     | --------------------------------------------------
[2026-03-02 02:35:33] 2026-03-02 10:34:41,032 | INFO     | 
[2026-03-02 02:35:33] 2026-03-02 10:34:41,032 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/0
[2026-03-02 02:35:33] 2026-03-02 10:34:41,051 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-02 02:35:33] 2026-03-02 10:34:41,051 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-02 02:35:33] 2026-03-02 10:34:41,051 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-02 02:35:33] 2026-03-02 10:34:41,051 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-02 02:35:33] 2026-03-02 10:34:41,051 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-02 02:35:33] 2026-03-02 10:34:41,051 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-02 02:35:33] 2026-03-02 10:34:41,051 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-02 02:35:33] 2026-03-02 10:34:41,051 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-02 02:35:33] 2026-03-02 10:34:41,051 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-02 02:35:33] 2026-03-02 10:34:41,051 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-02 02:35:33] 2026-03-02 10:34:41,051 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-02 02:35:33] 2026-03-02 10:34:41,052 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-02 02:35:33] 2026-03-02 10:34:41,052 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-02 02:35:33] 2026-03-02 10:34:41,052 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-02 02:35:33] 2026-03-02 10:34:41,052 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-02 02:35:33] 2026-03-02 10:34:41,052 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-02 02:35:33] 2026-03-02 10:34:41,052 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-02 02:35:33] 2026-03-02 10:34:41,052 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-02 02:35:33] 2026-03-02 10:34:41,052 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-02 02:35:33] 2026-03-02 10:34:41,052 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-02 02:35:33] 2026-03-02 10:34:41,052 | INFO     | job 7035353256 has completed (purged errors)
[2026-03-02 02:35:33] 2026-03-02 10:34:41,052 | INFO     | overall cleanup function is called
[2026-03-02 02:35:33] 2026-03-02 10:34:41,098 | INFO     | number of running child processes to parent process 530723: 1
[2026-03-02 02:35:33] 2026-03-02 10:34:41,098 | INFO     | maximum number of monitored processes: 6
[2026-03-02 02:35:33] 2026-03-02 10:34:41,098 | INFO     | aborting job monitoring since job object (job id=7035353256) has expired
[2026-03-02 02:35:33] 2026-03-02 10:34:42,061 | INFO     | --- collectZombieJob: --- 10, [530723]
[2026-03-02 02:35:33] 2026-03-02 10:34:42,062 | INFO     | zombie collector waiting for pid 530723
[2026-03-02 02:35:33] 2026-03-02 10:34:42,062 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-02 02:35:33] 2026-03-02 10:34:42,062 | INFO     | collected zombie processes
[2026-03-02 02:35:33] 2026-03-02 10:34:42,062 | INFO     | will attempt to kill all subprocesses of pid=530723
[2026-03-02 02:35:33] 2026-03-02 10:34:42,132 | INFO     | process IDs to be killed: [530723] (in reverse order)
[2026-03-02 02:35:33] 2026-03-02 10:34:42,166 | WARNING  | found no corresponding commands to process id(s)
[2026-03-02 02:35:33] 2026-03-02 10:34:42,166 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-02 02:35:33] 2026-03-02 10:34:42,169 | INFO     | did not find any defunct processes belonging to 530723
[2026-03-02 02:35:33] 2026-03-02 10:34:42,171 | INFO     | did not find any defunct processes belonging to 530723
[2026-03-02 02:35:33] 2026-03-02 10:34:42,171 | INFO     | ready for new job
[2026-03-02 02:35:33] 2026-03-02 10:34:42,171 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-02 02:35:33] 2026-03-02 10:34:42,172 | INFO     | **************************************
[2026-03-02 02:35:33] 2026-03-02 10:34:42,172 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-02 02:35:33] 2026-03-02 10:34:42,172 | INFO     | **************************************
[2026-03-02 02:35:33] 2026-03-02 10:34:42,172 | INFO     | 
[2026-03-02 02:35:33] 2026-03-02 10:34:42,173 | INFO     | pilot is running in a VM
[2026-03-02 02:35:33] 2026-03-02 10:34:42,173 | INFO     | architecture information:
[2026-03-02 02:35:33] 2026-03-02 10:34:42,173 | INFO     | executing command: cat /etc/os-release
[2026-03-02 02:35:33] 2026-03-02 10:34:42,184 | INFO     | cat /etc/os-release:
[2026-03-02 02:35:33] NAME="CentOS Linux"
[2026-03-02 02:35:33] VERSION="7 (Core)"
[2026-03-02 02:35:33] ID="centos"
[2026-03-02 02:35:33] ID_LIKE="rhel fedora"
[2026-03-02 02:35:33] VERSION_ID="7"
[2026-03-02 02:35:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-02 02:35:33] ANSI_COLOR="0;31"
[2026-03-02 02:35:33] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-02 02:35:33] HOME_URL="https://www.centos.org/"
[2026-03-02 02:35:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-02 02:35:33] 
[2026-03-02 02:35:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-02 02:35:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-02 02:35:33] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-02 02:35:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-02 02:35:33] 
[2026-03-02 02:35:33] 2026-03-02 10:34:42,184 | INFO     | **************************************
[2026-03-02 02:35:33] 2026-03-02 10:34:42,687 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/0
[2026-03-02 02:35:33] 2026-03-02 10:34:42,700 | INFO     | sufficient remaining disk space (2029549256704 B)
[2026-03-02 02:35:33] 2026-03-02 10:34:42,700 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-02 02:35:33] 2026-03-02 10:34:42,700 | INFO     | current server update state: UPDATING_FINAL
[2026-03-02 02:35:33] 2026-03-02 10:34:42,700 | INFO     | update_server=False
[2026-03-02 02:35:33] 2026-03-02 10:34:42,701 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-02 02:35:33] 2026-03-02 10:34:42,701 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-02 02:35:33] 2026-03-02 10:34:42,701 | INFO     | aborting loop
[2026-03-02 02:35:33] 2026-03-02 10:34:42,701 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-02 02:35:33] 2026-03-02 10:34:42,701 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-02 02:35:33] 2026-03-02 10:34:43,474 | INFO     | all data control threads have been joined
[2026-03-02 02:35:33] 2026-03-02 10:34:43,702 | INFO     | [job] retrieve thread has finished
[2026-03-02 02:35:33] 2026-03-02 10:34:43,706 | INFO     | [job] job monitor thread has finished
[2026-03-02 02:35:33] 2026-03-02 10:34:43,707 | INFO     | [job] queue monitor thread has finished
[2026-03-02 02:35:33] 2026-03-02 10:34:43,750 | INFO     | all job control threads have been joined
[2026-03-02 02:35:33] 2026-03-02 10:34:43,770 | INFO     | [data] copytool_in thread has finished
[2026-03-02 02:35:33] 2026-03-02 10:34:43,791 | INFO     | all payload control threads have been joined
[2026-03-02 02:35:33] 2026-03-02 10:34:43,821 | INFO     | [payload] execute_payloads thread has finished
[2026-03-02 02:35:33] 2026-03-02 10:34:44,160 | INFO     | [payload] validate_post thread has finished
[2026-03-02 02:35:33] 2026-03-02 10:34:44,480 | INFO     | [data] control thread has finished
[2026-03-02 02:35:33] 2026-03-02 10:34:44,707 | INFO     | [data] copytool_out thread has finished
[2026-03-02 02:35:33] 2026-03-02 10:34:44,756 | INFO     | [job] control thread has finished
[2026-03-02 02:35:33] 2026-03-02 10:34:44,792 | INFO     | [payload] control thread has finished
[2026-03-02 02:35:33] 2026-03-02 10:34:44,912 | INFO     | [job] validate thread has finished
[2026-03-02 02:35:33] 2026-03-02 10:34:44,976 | INFO     | [payload] failed_post thread has finished
[2026-03-02 02:35:33] 2026-03-02 10:34:45,016 | INFO     | [job] create_data_payload thread has finished
[2026-03-02 02:35:33] 2026-03-02 10:34:45,118 | INFO     | [payload] validate_pre thread has finished
[2026-03-02 02:35:33] 2026-03-02 10:34:45,784 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-02 02:35:33] 2026-03-02 10:34:49,790 | INFO     | [data] queue_monitor thread has finished
[2026-03-02 02:35:33] 2026-03-02 10:34:53,307 | INFO     | job.realtimelogging is not enabled
[2026-03-02 02:35:33] 2026-03-02 10:34:54,312 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-02 02:35:33] 2026-03-02 10:35:13,010 | INFO     | PID=526191 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-02 02:35:33] 2026-03-02 10:35:13,010 | INFO     | .. there are 2 such processes running
[2026-03-02 02:35:33] 2026-03-02 10:35:13,010 | INFO     | found 0 job(s) in 20 queues
[2026-03-02 02:35:33] 2026-03-02 10:35:13,010 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-02 02:35:33] 2026-03-02 10:35:13,011 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-02 02:35:33] 2026-03-02 10:35:26,507 | INFO     | [monitor] cgroup control has ended
[2026-03-02 02:35:33] 2026-03-02 10:35:28,140 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 123390523291456)>', '<ExcThread(monitor, started 123389838616320)>']
[2026-03-02 02:35:33] 2026-03-02 10:35:29,090 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-02 02:35:33] 2026-03-02 10:35:29,090 | INFO     | [monitor] control thread has ended
[2026-03-02 02:35:33] 2026-03-02 10:35:33,165 | INFO     | all workflow threads have been joined
[2026-03-02 02:35:33] 2026-03-02 10:35:33,165 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-02 02:35:33] 2026-03-02 10:35:33,166 | INFO     | traces error code: 0
[2026-03-02 02:35:33] 2026-03-02 10:35:33,166 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-02 02:35:33] 2026-03-02 10:35:33,256 [wrapper] ==== pilot stdout END ====
[2026-03-02 02:35:33] 2026-03-02 10:35:33,259 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-02 02:35:33] 2026-03-02 10:35:33,261 [wrapper] pilotpid: 526191
[2026-03-02 02:35:33] 2026-03-02 10:35:33,263 [wrapper] Pilot exit status: 0
[2026-03-02 02:35:33] 2026-03-02 10:35:33,270 [wrapper] pandaids: 7035353256
[2026-03-02 02:35:33] 2026-03-02 10:35:33,291 [wrapper] cleanup supervisor_pilot  535327 526192
[2026-03-02 02:35:33] 2026-03-02 10:35:33,292 [wrapper] Test setup, not cleaning
[2026-03-02 02:35:33] 2026-03-02 10:35:33,294 [wrapper] apfmon messages muted
[2026-03-02 02:35:33] 2026-03-02 10:35:33,296 [wrapper] ==== wrapper stdout END ====
[2026-03-02 02:35:33] 2026-03-02 10:35:33,297 [wrapper] ==== wrapper stderr END ====
[2026-03-02 02:35:33]  *** Error codes and diagnostics ***
[2026-03-02 02:35:33]     "exeErrorCode": 0,
[2026-03-02 02:35:33]     "exeErrorDiag": "",
[2026-03-02 02:35:33]     "pilotErrorCode": 0,
[2026-03-02 02:35:33]     "pilotErrorDiag": "",
[2026-03-02 02:35:33]  *** Listing of results directory ***
[2026-03-02 02:35:33] total 333848
[2026-03-02 02:35:33] -rw-r--r-- 1 boinc boinc    584627 Mar  1 09:22 pilot3.tar.gz
[2026-03-02 02:35:33] -rwx------ 1 boinc boinc     36322 Mar  1 09:25 runpilot2-wrapper.sh
[2026-03-02 02:35:33] -rw-r--r-- 1 boinc boinc      5111 Mar  1 09:26 queuedata.json
[2026-03-02 02:35:33] -rw-r--r-- 1 boinc boinc       100 Mar  2 02:09 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-02 02:35:33] -rwxr-xr-x 1 boinc boinc      7986 Mar  2 02:09 run_atlas
[2026-03-02 02:35:33] -rw-r--r-- 1 boinc boinc       105 Mar  2 02:09 job.xml
[2026-03-02 02:35:33] -rw-r--r-- 1 boinc boinc      6532 Mar  2 02:09 init_data.xml
[2026-03-02 02:35:33] -rw-r--r-- 2 boinc boinc 191241874 Mar  2 02:09 EVNT.48700856._000042.pool.root.1
[2026-03-02 02:35:33] -rw-r--r-- 2 boinc boinc     15845 Mar  2 02:09 start_atlas.sh
[2026-03-02 02:35:33] drwxrwx--x 2 boinc boinc      4096 Mar  2 02:09 shared
[2026-03-02 02:35:33] -rw-r--r-- 2 boinc boinc    597933 Mar  2 02:09 input.tar.gz
[2026-03-02 02:35:33] -rw-r--r-- 1 boinc boinc         0 Mar  2 02:09 boinc_lockfile
[2026-03-02 02:35:33] -rw-r--r-- 1 boinc boinc      2520 Mar  2 02:09 pandaJob.out
[2026-03-02 02:35:33] -rw------- 1 boinc boinc    997501 Mar  2 02:09 agis_schedconf.cvmfs.json
[2026-03-02 02:35:33] -rw------- 1 boinc boinc   1513015 Mar  2 02:09 agis_ddmendpoints.agis.ALL.json
[2026-03-02 02:35:33] -rw------- 1 boinc boinc       431 Mar  2 02:09 workernode_map.json
[2026-03-02 02:35:33] drwx------ 5 boinc boinc      4096 Mar  2 02:09 pilot3
[2026-03-02 02:35:33] -rw------- 1 boinc boinc 145481341 Mar  2 02:34 HITS.48700858._001039.pool.root.1
[2026-03-02 02:35:33] -rw-r--r-- 1 boinc boinc       530 Mar  2 02:34 boinc_task_state.xml
[2026-03-02 02:35:33] -rw------- 1 boinc boinc        95 Mar  2 02:34 pilot_heartbeat.json
[2026-03-02 02:35:33] -rw------- 1 boinc boinc      1017 Mar  2 02:34 memory_monitor_summary.json
[2026-03-02 02:35:33] -rw------- 1 boinc boinc    338986 Mar  2 02:34 log.48700858._001039.job.log.tgz.1
[2026-03-02 02:35:33] -rw------- 1 boinc boinc      6325 Mar  2 02:34 heartbeat.json
[2026-03-02 02:35:33] -rw-r--r-- 1 boinc boinc        27 Mar  2 02:35 wrapper_checkpoint.txt
[2026-03-02 02:35:33] -rw-r--r-- 1 boinc boinc      8192 Mar  2 02:35 boinc_mmap_file
[2026-03-02 02:35:33] -rw------- 1 boinc boinc      4961 Mar  2 02:35 pilotlog.txt
[2026-03-02 02:35:33] -rw------- 1 boinc boinc    263649 Mar  2 02:35 log.48700858._001039.job.log.1
[2026-03-02 02:35:33] -rw------- 1 boinc boinc       357 Mar  2 02:35 output.list
[2026-03-02 02:35:33] -rw-r--r-- 1 boinc boinc       620 Mar  2 02:35 runtime_log
[2026-03-02 02:35:33] -rw------- 1 boinc boinc    624640 Mar  2 02:35 result.tar.gz
[2026-03-02 02:35:33] -rw------- 1 boinc boinc       635 Mar  2 02:35 tRyMDmYizG9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmwFBLDmPqjerm.diag
[2026-03-02 02:35:33] -rw-r--r-- 1 boinc boinc      8862 Mar  2 02:35 runtime_log.err
[2026-03-02 02:35:33] -rw-r--r-- 1 boinc boinc     21564 Mar  2 02:35 stderr.txt
[2026-03-02 02:35:33] HITS file was successfully produced:
[2026-03-02 02:35:33] -rw------- 1 boinc boinc 145481341 Mar  2 02:34 shared/HITS.pool.root.1
[2026-03-02 02:35:33]  *** Contents of shared directory: ***
[2026-03-02 02:35:33] total 330052
[2026-03-02 02:35:33] -rw-r--r-- 2 boinc boinc 191241874 Mar  2 02:09 ATLAS.root_0
[2026-03-02 02:35:33] -rw-r--r-- 2 boinc boinc     15845 Mar  2 02:09 start_atlas.sh
[2026-03-02 02:35:33] -rw-r--r-- 2 boinc boinc    597933 Mar  2 02:09 input.tar.gz
[2026-03-02 02:35:33] -rw------- 1 boinc boinc 145481341 Mar  2 02:34 HITS.pool.root.1
[2026-03-02 02:35:33] -rw------- 1 boinc boinc    624640 Mar  2 02:35 result.tar.gz
02:35:34 (522043): run_atlas exited; CPU time 15841.943992
02:35:34 (522043): called boinc_finish(0)

</stderr_txt>
]]>

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