Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:51:39 (3819383): wrapper (7.7.26015): starting
05:51:39 (3819383): wrapper: running run_atlas (--nthreads 4)
[2026-03-04 05:51:40] Arguments: --nthreads 4
[2026-03-04 05:51:40] Threads: 4
[2026-03-04 05:51:40] Checking for CVMFS
[2026-03-04 05:51:40] No cvmfs_config command found, will try listing directly
[2026-03-04 05:51:40] CVMFS is ok
[2026-03-04 05:51:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-04 05:51:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-04 05:51:40] Further information can be found at the LHC@home message board.
[2026-03-04 05:51:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-04 05:51:40] Checking for apptainer binary...
[2026-03-04 05:51:40] which: no apptainer in ((null))
[2026-03-04 05:51:40] apptainer is not installed, using version from CVMFS
[2026-03-04 05:51:40] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-04 05:51:40] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot228/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut20.grid.cesnet.cz
[2026-03-04 05:51:40] apptainer works
[2026-03-04 05:51:40] Set ATHENA_PROC_NUMBER=4
[2026-03-04 05:51:40] Set ATHENA_CORE_NUMBER=4
[2026-03-04 05:51:40] Starting ATLAS job with PandaID=7035269468
[2026-03-04 05:51:40] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot228/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-04 06:59:31]  *** The last 200 lines of the pilot log: ***
[2026-03-04 06:59:31]  filetype=log
[2026-03-04 06:59:31]  guid=778dbda4-ce8d-4c38-9edf-f74ce4814ab7
[2026-03-04 06:59:31]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-03-04 06:59:31]  is_altstaged=None
[2026-03-04 06:59:31]  is_tar=False
[2026-03-04 06:59:31]  lfn=log.48700874._000497.job.log.tgz.1
[2026-03-04 06:59:31]  mtime=0
[2026-03-04 06:59:31]  protocol_id=None
[2026-03-04 06:59:31]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-04 06:59:31]  replicas=None
[2026-03-04 06:59:31]  scope=mc23_13p6TeV
[2026-03-04 06:59:31]  status=None
[2026-03-04 06:59:31]  status_code=0
[2026-03-04 06:59:31]  storage_token=
[2026-03-04 06:59:31]  surl=/var/lib/boinc/var/slot228/slots/0/PanDA_Pilot-7035269468/log.48700874._000497.job.log.tgz.1
[2026-03-04 06:59:31]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/82/34/log.48700874._000497.job.log.tgz.1
[2026-03-04 06:59:31]  workdir=None
[2026-03-04 06:59:31] ]
[2026-03-04 06:59:31] 2026-03-04 05:56:58,836 | INFO     | transferring file log.48700874._000497.job.log.tgz.1 from /var/lib/boinc/var/slot228/slots/0/PanDA_Pilot-7035269468/log.48700874._000497.job.log.tgz.1 to /var/lib/
[2026-03-04 06:59:31] 2026-03-04 05:56:58,837 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot228/slots/0/PanDA_Pilot-7035269468/log.48700874._000497.job.log.tgz.1 /var/lib/boinc/var/slot228/slots/0/
[2026-03-04 06:59:31] 2026-03-04 05:56:58,857 | INFO     | adding to output.list: log.48700874._000497.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/82/34/log.48700874._000497.job.log.tg
[2026-03-04 06:59:31] 2026-03-04 05:56:58,858 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-04 06:59:31] 2026-03-04 05:56:58,858 | INFO     | summary of transferred files:
[2026-03-04 06:59:31] 2026-03-04 05:56:58,858 | INFO     |  -- lfn=log.48700874._000497.job.log.tgz.1, status_code=0, status=transferred
[2026-03-04 06:59:31] 2026-03-04 05:56:58,858 | INFO     | stage-out finished correctly
[2026-03-04 06:59:31] 2026-03-04 05:56:59,089 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-04 06:59:31] 2026-03-04 05:56:59,804 | INFO     | monitor loop #282: job 0:7035269468 is in state 'finished'
[2026-03-04 06:59:31] 2026-03-04 05:56:59,804 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-04 06:59:31] 2026-03-04 05:56:59,933 | INFO     | time since job start (3905s) is within the limit (349056.0s)
[2026-03-04 06:59:31] 2026-03-04 05:57:00,804 | INFO     | job 7035269468 has state=finished
[2026-03-04 06:59:31] 2026-03-04 05:57:00,805 | INFO     | preparing for final server update for job 7035269468 in state='finished'
[2026-03-04 06:59:31] 2026-03-04 05:57:00,805 | INFO     | reading metadata from: /var/lib/boinc/var/slot228/slots/0/PanDA_Pilot-7035269468/jobReport.json
[2026-03-04 06:59:31] 2026-03-04 05:57:00,806 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot228/slots/0/workernode_map.json
[2026-03-04 06:59:31] 2026-03-04 05:57:00,807 | INFO     | this job has now completed (state=finished)
[2026-03-04 06:59:31] 2026-03-04 05:57:00,807 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-04 06:59:31] 2026-03-04 05:57:00,807 | INFO     | log transfer has been attempted: DONE
[2026-03-04 06:59:31] 2026-03-04 05:57:00,807 | INFO     | job 7035269468 has finished - writing final server update
[2026-03-04 06:59:31] 2026-03-04 05:57:00,807 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_547018/.job.ad'
[2026-03-04 06:59:31] 2026-03-04 05:57:00,807 | INFO     | total number of processed events: 400 (read)
[2026-03-04 06:59:31] 2026-03-04 05:57:00,825 | INFO     | using path: /var/lib/boinc/var/slot228/slots/0/PanDA_Pilot-7035269468/memory_monitor_summary.json (trf name=prmon)
[2026-03-04 06:59:31] 2026-03-04 05:57:00,825 | INFO     | extracted standard info from prmon json
[2026-03-04 06:59:31] 2026-03-04 05:57:00,825 | INFO     | extracted standard memory fields from prmon json
[2026-03-04 06:59:31] 2026-03-04 05:57:00,825 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-04 06:59:31] 2026-03-04 05:57:00,825 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-04 06:59:31] 2026-03-04 05:57:00,825 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-04 06:59:31] 2026-03-04 05:57:00,826 | INFO     | fitting pss+swap vs Time
[2026-03-04 06:59:31] 2026-03-04 05:57:00,826 | INFO     | sum of square deviations: 57407588.0
[2026-03-04 06:59:31] 2026-03-04 05:57:00,826 | INFO     | sum of deviations: -152941884.00000003
[2026-03-04 06:59:31] 2026-03-04 05:57:00,827 | INFO     | mean x: 1772601951.0
[2026-03-04 06:59:31] 2026-03-04 05:57:00,827 | INFO     | mean y: 2313155.210526316
[2026-03-04 06:59:31] 2026-03-04 05:57:00,827 | INFO     | intersect: 4724773920.641322
[2026-03-04 06:59:31] 2026-03-04 05:57:00,827 | INFO     | chi2: 0.00046973803931296367
[2026-03-04 06:59:31] 2026-03-04 05:57:00,827 | INFO     | current memory leak: -2.66 B/s (using 57 data points, chi2=0.00)
[2026-03-04 06:59:31] 2026-03-04 05:57:00,827 | INFO     | could have reported an average CPU frequency of 3551 MHz (6 samples)
[2026-03-04 06:59:31] 2026-03-04 05:57:00,827 | INFO     | ..............................
[2026-03-04 06:59:31] 2026-03-04 05:57:00,827 | INFO     | . Timing measurements:
[2026-03-04 06:59:31] 2026-03-04 05:57:00,827 | INFO     | . get job = 0 s
[2026-03-04 06:59:31] 2026-03-04 05:57:00,827 | INFO     | . initial setup = 5 s
[2026-03-04 06:59:31] 2026-03-04 05:57:00,827 | INFO     | . payload setup = 6 s
[2026-03-04 06:59:31] 2026-03-04 05:57:00,827 | INFO     | . stage-in = 0 s
[2026-03-04 06:59:31] 2026-03-04 05:57:00,827 | INFO     | . payload execution = 3883 s
[2026-03-04 06:59:31] 2026-03-04 05:57:00,827 | INFO     | . stage-out = 0 s
[2026-03-04 06:59:31] 2026-03-04 05:57:00,827 | INFO     | . log creation = 0 s
[2026-03-04 06:59:31] 2026-03-04 05:57:00,827 | INFO     | ..............................
[2026-03-04 06:59:31] 2026-03-04 05:57:01,287 | INFO     | 
[2026-03-04 06:59:31] 2026-03-04 05:57:01,287 | INFO     | job summary report
[2026-03-04 06:59:31] 2026-03-04 05:57:01,287 | INFO     | --------------------------------------------------
[2026-03-04 06:59:31] 2026-03-04 05:57:01,287 | INFO     | PanDA job id: 7035269468
[2026-03-04 06:59:31] 2026-03-04 05:57:01,287 | INFO     | task id: 48700874
[2026-03-04 06:59:31] 2026-03-04 05:57:01,287 | INFO     | errors: (none)
[2026-03-04 06:59:31] 2026-03-04 05:57:01,287 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-04 06:59:31] 2026-03-04 05:57:01,287 | INFO     | pilot state: finished 
[2026-03-04 06:59:31] 2026-03-04 05:57:01,287 | INFO     | transexitcode: 0
[2026-03-04 06:59:31] 2026-03-04 05:57:01,287 | INFO     | exeerrorcode: 0
[2026-03-04 06:59:31] 2026-03-04 05:57:01,287 | INFO     | exeerrordiag: 
[2026-03-04 06:59:31] 2026-03-04 05:57:01,287 | INFO     | exitcode: 0
[2026-03-04 06:59:31] 2026-03-04 05:57:01,287 | INFO     | exitmsg: OK
[2026-03-04 06:59:31] 2026-03-04 05:57:01,287 | INFO     | cpuconsumptiontime: 14701 s
[2026-03-04 06:59:31] 2026-03-04 05:57:01,287 | INFO     | nevents: 400
[2026-03-04 06:59:31] 2026-03-04 05:57:01,287 | INFO     | neventsw: 0
[2026-03-04 06:59:31] 2026-03-04 05:57:01,288 | INFO     | pid: 3830114
[2026-03-04 06:59:31] 2026-03-04 05:57:01,288 | INFO     | pgrp: 3830114
[2026-03-04 06:59:31] 2026-03-04 05:57:01,288 | INFO     | corecount: 4
[2026-03-04 06:59:31] 2026-03-04 05:57:01,288 | INFO     | event service: False
[2026-03-04 06:59:31] 2026-03-04 05:57:01,288 | INFO     | sizes: {0: 2286790, 1: 2287080, 11: 2287080, 3893: 2312967, 3894: 2322045, 3896: 2322183}
[2026-03-04 06:59:31] 2026-03-04 05:57:01,288 | INFO     | --------------------------------------------------
[2026-03-04 06:59:31] 2026-03-04 05:57:01,288 | INFO     | 
[2026-03-04 06:59:31] 2026-03-04 05:57:01,288 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot228/slots/0
[2026-03-04 06:59:31] 2026-03-04 05:57:01,308 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-04 06:59:31] 2026-03-04 05:57:01,309 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-04 06:59:31] 2026-03-04 05:57:01,309 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-04 06:59:31] 2026-03-04 05:57:01,309 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-04 06:59:31] 2026-03-04 05:57:01,309 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-04 06:59:31] 2026-03-04 05:57:01,309 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-04 06:59:31] 2026-03-04 05:57:01,309 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-04 06:59:31] 2026-03-04 05:57:01,309 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-04 06:59:31] 2026-03-04 05:57:01,309 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-04 06:59:31] 2026-03-04 05:57:01,309 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-04 06:59:31] 2026-03-04 05:57:01,309 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-04 06:59:31] 2026-03-04 05:57:01,309 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-04 06:59:31] 2026-03-04 05:57:01,309 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-04 06:59:31] 2026-03-04 05:57:01,309 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-04 06:59:31] 2026-03-04 05:57:01,309 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-04 06:59:31] 2026-03-04 05:57:01,309 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-04 06:59:31] 2026-03-04 05:57:01,309 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-04 06:59:31] 2026-03-04 05:57:01,309 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-04 06:59:31] 2026-03-04 05:57:01,309 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-04 06:59:31] 2026-03-04 05:57:01,309 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-04 06:59:31] 2026-03-04 05:57:01,309 | INFO     | job 7035269468 has completed (purged errors)
[2026-03-04 06:59:31] 2026-03-04 05:57:01,309 | INFO     | overall cleanup function is called
[2026-03-04 06:59:31] 2026-03-04 05:57:02,316 | INFO     | --- collectZombieJob: --- 10, [3830114]
[2026-03-04 06:59:31] 2026-03-04 05:57:02,316 | INFO     | zombie collector waiting for pid 3830114
[2026-03-04 06:59:31] 2026-03-04 05:57:02,316 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-04 06:59:31] 2026-03-04 05:57:02,316 | INFO     | collected zombie processes
[2026-03-04 06:59:31] 2026-03-04 05:57:02,316 | INFO     | will attempt to kill all subprocesses of pid=3830114
[2026-03-04 06:59:31] 2026-03-04 05:57:02,855 | INFO     | process IDs to be killed: [3830114] (in reverse order)
[2026-03-04 06:59:31] 2026-03-04 05:57:03,088 | WARNING  | found no corresponding commands to process id(s)
[2026-03-04 06:59:31] 2026-03-04 05:57:03,088 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-04 06:59:31] 2026-03-04 05:57:03,121 | INFO     | did not find any defunct processes belonging to 3830114
[2026-03-04 06:59:31] 2026-03-04 05:57:03,152 | INFO     | did not find any defunct processes belonging to 3830114
[2026-03-04 06:59:31] 2026-03-04 05:57:03,152 | INFO     | ready for new job
[2026-03-04 06:59:31] 2026-03-04 05:57:03,152 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-04 06:59:31] 2026-03-04 05:57:03,153 | INFO     | **************************************
[2026-03-04 06:59:31] 2026-03-04 05:57:03,154 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-04 06:59:31] 2026-03-04 05:57:03,154 | INFO     | **************************************
[2026-03-04 06:59:31] 2026-03-04 05:57:03,154 | INFO     | 
[2026-03-04 06:59:31] 2026-03-04 05:57:03,160 | INFO     | architecture information:
[2026-03-04 06:59:31] 2026-03-04 05:57:03,160 | INFO     | executing command: cat /etc/os-release
[2026-03-04 06:59:31] 2026-03-04 05:57:03,179 | INFO     | cat /etc/os-release:
[2026-03-04 06:59:31] NAME="CentOS Linux"
[2026-03-04 06:59:31] VERSION="7 (Core)"
[2026-03-04 06:59:31] ID="centos"
[2026-03-04 06:59:31] ID_LIKE="rhel fedora"
[2026-03-04 06:59:31] VERSION_ID="7"
[2026-03-04 06:59:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-04 06:59:31] ANSI_COLOR="0;31"
[2026-03-04 06:59:31] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-04 06:59:31] HOME_URL="https://www.centos.org/"
[2026-03-04 06:59:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-04 06:59:31] 
[2026-03-04 06:59:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-04 06:59:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-04 06:59:31] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-04 06:59:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-04 06:59:31] 
[2026-03-04 06:59:31] 2026-03-04 05:57:03,179 | INFO     | **************************************
[2026-03-04 06:59:31] 2026-03-04 05:57:03,681 | INFO     | executing command: df -mP /var/lib/boinc/var/slot228/slots/0
[2026-03-04 06:59:31] 2026-03-04 05:57:03,696 | INFO     | sufficient remaining disk space (20697841664 B)
[2026-03-04 06:59:31] 2026-03-04 05:57:03,696 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-04 06:59:31] 2026-03-04 05:57:03,696 | INFO     | current server update state: UPDATING_FINAL
[2026-03-04 06:59:31] 2026-03-04 05:57:03,696 | INFO     | update_server=False
[2026-03-04 06:59:31] 2026-03-04 05:57:03,696 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-04 06:59:31] 2026-03-04 05:57:03,697 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-04 06:59:31] 2026-03-04 05:57:03,697 | INFO     | aborting loop
[2026-03-04 06:59:31] 2026-03-04 05:57:03,700 | INFO     | all job control threads have been joined
[2026-03-04 06:59:31] 2026-03-04 05:57:03,939 | INFO     | all payload control threads have been joined
[2026-03-04 06:59:31] 2026-03-04 05:57:04,417 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-04 06:59:31] 2026-03-04 05:57:04,701 | INFO     | [job] retrieve thread has finished
[2026-03-04 06:59:31] 2026-03-04 05:57:04,702 | INFO     | [job] job monitor thread has finished
[2026-03-04 06:59:31] 2026-03-04 05:57:04,705 | INFO     | [job] control thread has finished
[2026-03-04 06:59:31] 2026-03-04 05:57:04,728 | INFO     | all data control threads have been joined
[2026-03-04 06:59:31] 2026-03-04 05:57:04,944 | INFO     | [payload] control thread has finished
[2026-03-04 06:59:31] 2026-03-04 05:57:05,145 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-04 06:59:31] 2026-03-04 05:57:05,188 | INFO     | [job] validate thread has finished
[2026-03-04 06:59:31] 2026-03-04 05:57:05,304 | INFO     | [payload] execute_payloads thread has finished
[2026-03-04 06:59:31] 2026-03-04 05:57:05,646 | INFO     | [job] create_data_payload thread has finished
[2026-03-04 06:59:31] 2026-03-04 05:57:05,733 | INFO     | [data] control thread has finished
[2026-03-04 06:59:31] 2026-03-04 05:57:05,751 | INFO     | [payload] validate_post thread has finished
[2026-03-04 06:59:31] 2026-03-04 05:57:05,773 | INFO     | [payload] validate_pre thread has finished
[2026-03-04 06:59:31] 2026-03-04 05:57:05,884 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-04 06:59:31] 2026-03-04 05:57:05,958 | INFO     | [payload] failed_post thread has finished
[2026-03-04 06:59:31] 2026-03-04 05:57:06,077 | INFO     | [data] copytool_in thread has finished
[2026-03-04 06:59:31] 2026-03-04 05:57:06,422 | INFO     | [data] copytool_out thread has finished
[2026-03-04 06:59:31] 2026-03-04 05:57:06,889 | INFO     | [job] queue monitor thread has finished
[2026-03-04 06:59:31] 2026-03-04 05:57:09,151 | INFO     | [data] queue_monitor thread has finished
[2026-03-04 06:59:31] 2026-03-04 05:57:14,092 | INFO     | job.realtimelogging is not enabled
[2026-03-04 06:59:31] 2026-03-04 05:57:15,097 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-04 06:59:31] 2026-03-04 05:57:33,541 | INFO     | PID=3823970 has CPU usage=7.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-04 06:59:31] 2026-03-04 05:57:33,541 | INFO     | .. there are 41 such processes running
[2026-03-04 06:59:31] 2026-03-04 05:57:33,542 | INFO     | found 0 job(s) in 20 queues
[2026-03-04 06:59:31] 2026-03-04 05:57:33,542 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-04 06:59:31] 2026-03-04 05:57:33,542 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-04 06:59:31] 2026-03-04 05:58:00,488 | INFO     | [monitor] cgroup control has ended
[2026-03-04 06:59:31] 2026-03-04 05:58:01,630 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23151458240320)>', '<ExcThread(monitor, started 23151146690304)>']
[2026-03-04 06:59:31] 2026-03-04 05:58:01,672 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-04 06:59:31] 2026-03-04 05:58:01,672 | INFO     | [monitor] control thread has ended
[2026-03-04 06:59:31] 2026-03-04 05:58:06,655 | INFO     | all workflow threads have been joined
[2026-03-04 06:59:31] 2026-03-04 05:58:06,655 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-04 06:59:31] 2026-03-04 05:58:06,655 | INFO     | traces error code: 0
[2026-03-04 06:59:31] 2026-03-04 05:58:06,655 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-04 06:59:31] 2026-03-04 05:58:06,798 [wrapper] ==== pilot stdout END ====
[2026-03-04 06:59:31] 2026-03-04 05:58:06,801 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-04 06:59:31] 2026-03-04 05:58:06,803 [wrapper] pilotpid: 3823970
[2026-03-04 06:59:31] 2026-03-04 05:58:06,806 [wrapper] Pilot exit status: 0
[2026-03-04 06:59:31] 2026-03-04 05:58:06,816 [wrapper] pandaids: 7035269468
[2026-03-04 06:59:31] 2026-03-04 05:58:06,953 [wrapper] cleanup supervisor_pilot 4190655 3823971
[2026-03-04 06:59:31] 2026-03-04 05:58:06,955 [wrapper] Test setup, not cleaning
[2026-03-04 06:59:31] 2026-03-04 05:58:06,956 [wrapper] apfmon messages muted
[2026-03-04 06:59:31] 2026-03-04 05:58:06,958 [wrapper] ==== wrapper stdout END ====
[2026-03-04 06:59:31] 2026-03-04 05:58:06,959 [wrapper] ==== wrapper stderr END ====
[2026-03-04 06:59:31]  *** Error codes and diagnostics ***
[2026-03-04 06:59:31]     "exeErrorCode": 0,
[2026-03-04 06:59:31]     "exeErrorDiag": "",
[2026-03-04 06:59:31]     "pilotErrorCode": 0,
[2026-03-04 06:59:31]     "pilotErrorDiag": "",
[2026-03-04 06:59:31]  *** Listing of results directory ***
[2026-03-04 06:59:31] total 332684
[2026-03-04 06:59:31] -rw-r--r--. 1 boinc boinc    584627 Mar  1 18:22 pilot3.tar.gz
[2026-03-04 06:59:31] -rwx------. 1 boinc boinc     36322 Mar  1 18:25 runpilot2-wrapper.sh
[2026-03-04 06:59:31] -rw-r--r--. 1 boinc boinc      5111 Mar  1 18:26 queuedata.json
[2026-03-04 06:59:31] -rw-r--r--. 1 boinc boinc       100 Mar  4 05:02 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-04 06:59:31] -rwxr-xr-x. 1 boinc boinc      7986 Mar  4 05:02 run_atlas
[2026-03-04 06:59:31] -rw-r--r--. 1 boinc boinc       105 Mar  4 05:02 job.xml
[2026-03-04 06:59:31] -rw-r--r--. 1 boinc boinc      6708 Mar  4 05:51 init_data.xml
[2026-03-04 06:59:31] -rw-r--r--. 2 boinc boinc 190723804 Mar  4 05:51 EVNT.48700872._000020.pool.root.1
[2026-03-04 06:59:31] -rw-r--r--. 2 boinc boinc    597950 Mar  4 05:51 input.tar.gz
[2026-03-04 06:59:31] -rw-r--r--. 2 boinc boinc     15845 Mar  4 05:51 start_atlas.sh
[2026-03-04 06:59:31] drwxrwx--x. 2 boinc boinc      4096 Mar  4 05:51 shared
[2026-03-04 06:59:31] -rw-r--r--. 1 boinc boinc         0 Mar  4 05:51 boinc_lockfile
[2026-03-04 06:59:31] -rw-r--r--. 1 boinc boinc      2548 Mar  4 05:51 pandaJob.out
[2026-03-04 06:59:31] -rw-------. 1 boinc boinc    997749 Mar  4 05:51 agis_schedconf.cvmfs.json
[2026-03-04 06:59:31] -rw-------. 1 boinc boinc   1516092 Mar  4 05:51 agis_ddmendpoints.agis.ALL.json
[2026-03-04 06:59:31] -rw-------. 1 boinc boinc       445 Mar  4 05:51 workernode_map.json
[2026-03-04 06:59:31] drwx------. 5 boinc boinc      4096 Mar  4 05:51 pilot3
[2026-03-04 06:59:31] -rw-------. 1 boinc boinc 144303373 Mar  4 06:56 HITS.48700874._000497.pool.root.1
[2026-03-04 06:59:31] -rw-r--r--. 1 boinc boinc       528 Mar  4 06:56 boinc_task_state.xml
[2026-03-04 06:59:31] -rw-------. 1 boinc boinc      1033 Mar  4 06:56 memory_monitor_summary.json
[2026-03-04 06:59:31] -rw-------. 1 boinc boinc    267405 Mar  4 06:56 log.48700874._000497.job.log.tgz.1
[2026-03-04 06:59:31] -rw-------. 1 boinc boinc      6346 Mar  4 06:57 heartbeat.json
[2026-03-04 06:59:31] -rw-------. 1 boinc boinc        95 Mar  4 06:57 pilot_heartbeat.json
[2026-03-04 06:59:31] -rw-------. 1 boinc boinc      4902 Mar  4 06:58 pilotlog.txt
[2026-03-04 06:59:31] -rw-------. 1 boinc boinc    583094 Mar  4 06:58 log.48700874._000497.job.log.1
[2026-03-04 06:59:31] -rw-------. 1 boinc boinc       357 Mar  4 06:58 output.list
[2026-03-04 06:59:31] -rw-r--r--. 1 boinc boinc       620 Mar  4 06:58 runtime_log
[2026-03-04 06:59:31] -rw-------. 1 boinc boinc    870400 Mar  4 06:58 result.tar.gz
[2026-03-04 06:59:31] -rw-r--r--. 1 boinc boinc      9221 Mar  4 06:58 runtime_log.err
[2026-03-04 06:59:31] -rw-------. 1 boinc boinc       662 Mar  4 06:58 PtELDmYizG9n9Rq4apOajLDm4fhM0noT9bVooX4SDmaH9KDmZJwzxm.diag
[2026-03-04 06:59:31] -rw-r--r--. 1 boinc boinc        26 Mar  4 06:59 wrapper_checkpoint.txt
[2026-03-04 06:59:31] -rw-r--r--. 1 boinc boinc      8192 Mar  4 06:59 boinc_mmap_file
[2026-03-04 06:59:31] -rw-r--r--. 1 boinc boinc     21152 Mar  4 06:59 stderr.txt
[2026-03-04 06:59:31] HITS file was successfully produced:
[2026-03-04 06:59:31] -rw-------. 1 boinc boinc 144303373 Mar  4 06:56 shared/HITS.pool.root.1
[2026-03-04 06:59:31]  *** Contents of shared directory: ***
[2026-03-04 06:59:31] total 328640
[2026-03-04 06:59:31] -rw-r--r--. 2 boinc boinc 190723804 Mar  4 05:51 ATLAS.root_0
[2026-03-04 06:59:31] -rw-r--r--. 2 boinc boinc    597950 Mar  4 05:51 input.tar.gz
[2026-03-04 06:59:31] -rw-r--r--. 2 boinc boinc     15845 Mar  4 05:51 start_atlas.sh
[2026-03-04 06:59:31] -rw-------. 1 boinc boinc 144303373 Mar  4 06:56 HITS.pool.root.1
[2026-03-04 06:59:31] -rw-------. 1 boinc boinc    870400 Mar  4 06:58 result.tar.gz
06:59:32 (3819383): run_atlas exited; CPU time 14875.245833
06:59:32 (3819383): called boinc_finish(0)

</stderr_txt>
]]>

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