Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
03:46:45 (3014309): wrapper (7.7.26015): starting
03:46:45 (3014309): wrapper: running run_atlas (--nthreads 4)
[2026-03-03 03:46:45] Arguments: --nthreads 4
[2026-03-03 03:46:45] Threads: 4
[2026-03-03 03:46:45] Checking for CVMFS
[2026-03-03 03:46:45] No cvmfs_config command found, will try listing directly
[2026-03-03 03:46:45] CVMFS is ok
[2026-03-03 03:46:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-03 03:46:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-03 03:46:45] Further information can be found at the LHC@home message board.
[2026-03-03 03:46:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-03 03:46:45] Checking for apptainer binary...
[2026-03-03 03:46:45] which: no apptainer in ((null))
[2026-03-03 03:46:45] apptainer is not installed, using version from CVMFS
[2026-03-03 03:46:45] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-03 03:46:45] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot96/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut20.grid.cesnet.cz
[2026-03-03 03:46:45] apptainer works
[2026-03-03 03:46:45] Set ATHENA_PROC_NUMBER=4
[2026-03-03 03:46:45] Set ATHENA_CORE_NUMBER=4
[2026-03-03 03:46:45] Starting ATLAS job with PandaID=7035353070
[2026-03-03 03:46:45] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot96/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-03 04:47:08]  *** The last 200 lines of the pilot log: ***
[2026-03-03 04:47:08]  scope=mc23_13p6TeV
[2026-03-03 04:47:08]  status=None
[2026-03-03 04:47:08]  status_code=0
[2026-03-03 04:47:08]  storage_token=
[2026-03-03 04:47:08]  surl=/var/lib/boinc/var/slot96/slots/0/PanDA_Pilot-7035353070/log.48700858._000988.job.log.tgz.1
[2026-03-03 04:47:08]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/93/d6/log.48700858._000988.job.log.tgz.1
[2026-03-03 04:47:08]  workdir=None
[2026-03-03 04:47:08] ]
[2026-03-03 04:47:08] 2026-03-03 03:46:18,400 | INFO     | transferring file log.48700858._000988.job.log.tgz.1 from /var/lib/boinc/var/slot96/slots/0/PanDA_Pilot-7035353070/log.48700858._000988.job.log.tgz.1 to /var/lib/b
[2026-03-03 04:47:08] 2026-03-03 03:46:18,400 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot96/slots/0/PanDA_Pilot-7035353070/log.48700858._000988.job.log.tgz.1 /var/lib/boinc/var/slot96/slots/0/lo
[2026-03-03 04:47:08] 2026-03-03 03:46:18,419 | INFO     | adding to output.list: log.48700858._000988.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/93/d6/log.48700858._000988.job.log.tg
[2026-03-03 04:47:08] 2026-03-03 03:46:18,420 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-03 04:47:08] 2026-03-03 03:46:18,420 | INFO     | summary of transferred files:
[2026-03-03 04:47:08] 2026-03-03 03:46:18,420 | INFO     |  -- lfn=log.48700858._000988.job.log.tgz.1, status_code=0, status=transferred
[2026-03-03 04:47:08] 2026-03-03 03:46:18,420 | INFO     | stage-out finished correctly
[2026-03-03 04:47:08] 2026-03-03 03:46:18,868 | WARNING  | process 3024681 can no longer be monitored (due to stat problems) - aborting
[2026-03-03 04:47:08] 2026-03-03 03:46:18,868 | INFO     | using path: /var/lib/boinc/var/slot96/slots/0/PanDA_Pilot-7035353070/memory_monitor_summary.json (trf name=prmon)
[2026-03-03 04:47:08] 2026-03-03 03:46:18,881 | INFO     | time since job start (3561s) is within the limit (349056.0s)
[2026-03-03 04:47:08] 2026-03-03 03:46:19,274 | INFO     | number of running child processes to parent process 3024681: 1
[2026-03-03 04:47:08] 2026-03-03 03:46:19,274 | INFO     | maximum number of monitored processes: 6
[2026-03-03 04:47:08] 2026-03-03 03:46:20,886 | INFO     | time since job start (3563s) is within the limit (349056.0s)
[2026-03-03 04:47:08] 2026-03-03 03:46:21,421 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-03 04:47:08] 2026-03-03 03:46:21,777 | INFO     | monitor loop #261: job 0:7035353070 is in state 'finished'
[2026-03-03 04:47:08] 2026-03-03 03:46:21,777 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-03 04:47:08] 2026-03-03 03:46:22,892 | INFO     | time since job start (3565s) is within the limit (349056.0s)
[2026-03-03 04:47:08] 2026-03-03 03:46:24,232 | INFO     | job 7035353070 has state=finished
[2026-03-03 04:47:08] 2026-03-03 03:46:24,232 | INFO     | preparing for final server update for job 7035353070 in state='finished'
[2026-03-03 04:47:08] 2026-03-03 03:46:24,280 | INFO     | monitor loop #262: job 0:7035353070 is in state 'finished'
[2026-03-03 04:47:08] 2026-03-03 03:46:24,280 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-03 04:47:08] 2026-03-03 03:46:24,784 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2026-03-03 04:47:08] 2026-03-03 03:46:24,784 | INFO     | reading metadata from: /var/lib/boinc/var/slot96/slots/0/PanDA_Pilot-7035353070/jobReport.json
[2026-03-03 04:47:08] 2026-03-03 03:46:24,785 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot96/slots/0/workernode_map.json
[2026-03-03 04:47:08] 2026-03-03 03:46:24,786 | INFO     | this job has now completed (state=finished)
[2026-03-03 04:47:08] 2026-03-03 03:46:24,786 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-03 04:47:08] 2026-03-03 03:46:24,786 | INFO     | log transfer has been attempted: DONE
[2026-03-03 04:47:08] 2026-03-03 03:46:24,786 | INFO     | job 7035353070 has finished - writing final server update
[2026-03-03 04:47:08] 2026-03-03 03:46:24,786 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_199353/.job.ad'
[2026-03-03 04:47:08] 2026-03-03 03:46:24,786 | INFO     | total number of processed events: 400 (read)
[2026-03-03 04:47:08] 2026-03-03 03:46:24,804 | INFO     | using path: /var/lib/boinc/var/slot96/slots/0/PanDA_Pilot-7035353070/memory_monitor_summary.json (trf name=prmon)
[2026-03-03 04:47:08] 2026-03-03 03:46:24,805 | INFO     | extracted standard info from prmon json
[2026-03-03 04:47:08] 2026-03-03 03:46:24,805 | INFO     | extracted standard memory fields from prmon json
[2026-03-03 04:47:08] 2026-03-03 03:46:24,805 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-03 04:47:08] 2026-03-03 03:46:24,805 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-03 04:47:08] 2026-03-03 03:46:24,805 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-03 04:47:08] 2026-03-03 03:46:24,806 | INFO     | fitting pss+swap vs Time
[2026-03-03 04:47:08] 2026-03-03 03:46:24,806 | INFO     | sum of square deviations: 41117050.0
[2026-03-03 04:47:08] 2026-03-03 03:46:24,806 | INFO     | sum of deviations: -19181999.000000004
[2026-03-03 04:47:08] 2026-03-03 03:46:24,806 | INFO     | mean x: 1772507867.0
[2026-03-03 04:47:08] 2026-03-03 03:46:24,806 | INFO     | mean y: 2318692.725490196
[2026-03-03 04:47:08] 2026-03-03 03:46:24,806 | INFO     | intersect: 829232202.6267633
[2026-03-03 04:47:08] 2026-03-03 03:46:24,806 | INFO     | chi2: 0.00030345401035191
[2026-03-03 04:47:08] 2026-03-03 03:46:24,807 | INFO     | current memory leak: -0.47 B/s (using 51 data points, chi2=0.00)
[2026-03-03 04:47:08] 2026-03-03 03:46:24,807 | INFO     | could have reported an average CPU frequency of 3615 MHz (5 samples)
[2026-03-03 04:47:08] 2026-03-03 03:46:24,807 | INFO     | ..............................
[2026-03-03 04:47:08] 2026-03-03 03:46:24,807 | INFO     | . Timing measurements:
[2026-03-03 04:47:08] 2026-03-03 03:46:24,807 | INFO     | . get job = 0 s
[2026-03-03 04:47:08] 2026-03-03 03:46:24,807 | INFO     | . initial setup = 4 s
[2026-03-03 04:47:08] 2026-03-03 03:46:24,807 | INFO     | . payload setup = 4 s
[2026-03-03 04:47:08] 2026-03-03 03:46:24,807 | INFO     | . stage-in = 0 s
[2026-03-03 04:47:08] 2026-03-03 03:46:24,807 | INFO     | . payload execution = 3542 s
[2026-03-03 04:47:08] 2026-03-03 03:46:24,807 | INFO     | . stage-out = 0 s
[2026-03-03 04:47:08] 2026-03-03 03:46:24,807 | INFO     | . log creation = 0 s
[2026-03-03 04:47:08] 2026-03-03 03:46:24,807 | INFO     | ..............................
[2026-03-03 04:47:08] 2026-03-03 03:46:24,854 | INFO     | 
[2026-03-03 04:47:08] 2026-03-03 03:46:24,855 | INFO     | job summary report
[2026-03-03 04:47:08] 2026-03-03 03:46:24,855 | INFO     | --------------------------------------------------
[2026-03-03 04:47:08] 2026-03-03 03:46:24,855 | INFO     | PanDA job id: 7035353070
[2026-03-03 04:47:08] 2026-03-03 03:46:24,855 | INFO     | task id: 48700858
[2026-03-03 04:47:08] 2026-03-03 03:46:24,855 | INFO     | errors: (none)
[2026-03-03 04:47:08] 2026-03-03 03:46:24,855 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-03 04:47:08] 2026-03-03 03:46:24,855 | INFO     | pilot state: finished 
[2026-03-03 04:47:08] 2026-03-03 03:46:24,855 | INFO     | transexitcode: 0
[2026-03-03 04:47:08] 2026-03-03 03:46:24,855 | INFO     | exeerrorcode: 0
[2026-03-03 04:47:08] 2026-03-03 03:46:24,855 | INFO     | exeerrordiag: 
[2026-03-03 04:47:08] 2026-03-03 03:46:24,855 | INFO     | exitcode: 0
[2026-03-03 04:47:08] 2026-03-03 03:46:24,855 | INFO     | exitmsg: OK
[2026-03-03 04:47:08] 2026-03-03 03:46:24,855 | INFO     | cpuconsumptiontime: 13501 s
[2026-03-03 04:47:08] 2026-03-03 03:46:24,855 | INFO     | nevents: 400
[2026-03-03 04:47:08] 2026-03-03 03:46:24,855 | INFO     | neventsw: 0
[2026-03-03 04:47:08] 2026-03-03 03:46:24,855 | INFO     | pid: 3024681
[2026-03-03 04:47:08] 2026-03-03 03:46:24,855 | INFO     | pgrp: 3024681
[2026-03-03 04:47:08] 2026-03-03 03:46:24,855 | INFO     | corecount: 4
[2026-03-03 04:47:08] 2026-03-03 03:46:24,855 | INFO     | event service: False
[2026-03-03 04:47:08] 2026-03-03 03:46:24,855 | INFO     | sizes: {0: 2282172, 11: 2282172, 3550: 2316882, 3553: 2316882, 3557: 2317108}
[2026-03-03 04:47:08] 2026-03-03 03:46:24,855 | INFO     | --------------------------------------------------
[2026-03-03 04:47:08] 2026-03-03 03:46:24,855 | INFO     | 
[2026-03-03 04:47:08] 2026-03-03 03:46:24,855 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot96/slots/0
[2026-03-03 04:47:08] 2026-03-03 03:46:24,874 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-03 04:47:08] 2026-03-03 03:46:24,875 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-03 04:47:08] 2026-03-03 03:46:24,875 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-03 04:47:08] 2026-03-03 03:46:24,875 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-03 04:47:08] 2026-03-03 03:46:24,875 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-03 04:47:08] 2026-03-03 03:46:24,875 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-03 04:47:08] 2026-03-03 03:46:24,875 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-03 04:47:08] 2026-03-03 03:46:24,875 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-03 04:47:08] 2026-03-03 03:46:24,875 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-03 04:47:08] 2026-03-03 03:46:24,875 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-03 04:47:08] 2026-03-03 03:46:24,875 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-03 04:47:08] 2026-03-03 03:46:24,875 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-03 04:47:08] 2026-03-03 03:46:24,875 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-03 04:47:08] 2026-03-03 03:46:24,875 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-03 04:47:08] 2026-03-03 03:46:24,875 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-03 04:47:08] 2026-03-03 03:46:24,875 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-03 04:47:08] 2026-03-03 03:46:24,875 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-03 04:47:08] 2026-03-03 03:46:24,875 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-03 04:47:08] 2026-03-03 03:46:24,875 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-03 04:47:08] 2026-03-03 03:46:24,875 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-03 04:47:08] 2026-03-03 03:46:24,875 | INFO     | job 7035353070 has completed (purged errors)
[2026-03-03 04:47:08] 2026-03-03 03:46:24,875 | INFO     | overall cleanup function is called
[2026-03-03 04:47:08] 2026-03-03 03:46:25,882 | INFO     | --- collectZombieJob: --- 10, [3024681]
[2026-03-03 04:47:08] 2026-03-03 03:46:25,882 | INFO     | zombie collector waiting for pid 3024681
[2026-03-03 04:47:08] 2026-03-03 03:46:25,882 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-03 04:47:08] 2026-03-03 03:46:25,882 | INFO     | collected zombie processes
[2026-03-03 04:47:08] 2026-03-03 03:46:25,882 | INFO     | will attempt to kill all subprocesses of pid=3024681
[2026-03-03 04:47:08] 2026-03-03 03:46:26,288 | INFO     | process IDs to be killed: [3024681] (in reverse order)
[2026-03-03 04:47:08] 2026-03-03 03:46:26,474 | WARNING  | found no corresponding commands to process id(s)
[2026-03-03 04:47:08] 2026-03-03 03:46:26,474 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-03 04:47:08] 2026-03-03 03:46:26,501 | INFO     | did not find any defunct processes belonging to 3024681
[2026-03-03 04:47:08] 2026-03-03 03:46:26,527 | INFO     | did not find any defunct processes belonging to 3024681
[2026-03-03 04:47:08] 2026-03-03 03:46:26,527 | INFO     | ready for new job
[2026-03-03 04:47:08] 2026-03-03 03:46:26,527 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-03 04:47:08] 2026-03-03 03:46:26,528 | INFO     | **************************************
[2026-03-03 04:47:08] 2026-03-03 03:46:26,528 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-03 04:47:08] 2026-03-03 03:46:26,528 | INFO     | **************************************
[2026-03-03 04:47:08] 2026-03-03 03:46:26,528 | INFO     | 
[2026-03-03 04:47:08] 2026-03-03 03:46:26,534 | INFO     | architecture information:
[2026-03-03 04:47:08] 2026-03-03 03:46:26,534 | INFO     | executing command: cat /etc/os-release
[2026-03-03 04:47:08] 2026-03-03 03:46:26,544 | INFO     | cat /etc/os-release:
[2026-03-03 04:47:08] NAME="CentOS Linux"
[2026-03-03 04:47:08] VERSION="7 (Core)"
[2026-03-03 04:47:08] ID="centos"
[2026-03-03 04:47:08] ID_LIKE="rhel fedora"
[2026-03-03 04:47:08] VERSION_ID="7"
[2026-03-03 04:47:08] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-03 04:47:08] ANSI_COLOR="0;31"
[2026-03-03 04:47:08] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-03 04:47:08] HOME_URL="https://www.centos.org/"
[2026-03-03 04:47:08] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-03 04:47:08] 
[2026-03-03 04:47:08] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-03 04:47:08] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-03 04:47:08] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-03 04:47:08] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-03 04:47:08] 
[2026-03-03 04:47:08] 2026-03-03 03:46:26,544 | INFO     | **************************************
[2026-03-03 04:47:08] 2026-03-03 03:46:27,047 | INFO     | executing command: df -mP /var/lib/boinc/var/slot96/slots/0
[2026-03-03 04:47:08] 2026-03-03 03:46:27,059 | INFO     | sufficient remaining disk space (21214789632 B)
[2026-03-03 04:47:08] 2026-03-03 03:46:27,059 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-03 04:47:08] 2026-03-03 03:46:27,059 | INFO     | current server update state: UPDATING_FINAL
[2026-03-03 04:47:08] 2026-03-03 03:46:27,059 | INFO     | update_server=False
[2026-03-03 04:47:08] 2026-03-03 03:46:27,059 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-03 04:47:08] 2026-03-03 03:46:27,059 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-03 04:47:08] 2026-03-03 03:46:27,201 | INFO     | all job control threads have been joined
[2026-03-03 04:47:08] 2026-03-03 03:46:27,472 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-03 04:47:08] 2026-03-03 03:46:27,788 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-03 04:47:08] 2026-03-03 03:46:27,788 | INFO     | aborting loop
[2026-03-03 04:47:08] 2026-03-03 03:46:28,065 | INFO     | [job] retrieve thread has finished
[2026-03-03 04:47:08] 2026-03-03 03:46:28,157 | INFO     | all data control threads have been joined
[2026-03-03 04:47:08] 2026-03-03 03:46:28,206 | INFO     | [job] control thread has finished
[2026-03-03 04:47:08] 2026-03-03 03:46:28,404 | INFO     | [job] validate thread has finished
[2026-03-03 04:47:08] 2026-03-03 03:46:28,432 | INFO     | all payload control threads have been joined
[2026-03-03 04:47:08] 2026-03-03 03:46:28,532 | INFO     | [job] create_data_payload thread has finished
[2026-03-03 04:47:08] 2026-03-03 03:46:28,572 | INFO     | [payload] validate_post thread has finished
[2026-03-03 04:47:08] 2026-03-03 03:46:28,681 | INFO     | [payload] validate_pre thread has finished
[2026-03-03 04:47:08] 2026-03-03 03:46:28,784 | INFO     | [data] copytool_in thread has finished
[2026-03-03 04:47:08] 2026-03-03 03:46:28,793 | INFO     | [job] job monitor thread has finished
[2026-03-03 04:47:08] 2026-03-03 03:46:29,063 | INFO     | [data] copytool_out thread has finished
[2026-03-03 04:47:08] 2026-03-03 03:46:29,162 | INFO     | [data] control thread has finished
[2026-03-03 04:47:08] 2026-03-03 03:46:29,424 | INFO     | [payload] execute_payloads thread has finished
[2026-03-03 04:47:08] 2026-03-03 03:46:29,436 | INFO     | [payload] control thread has finished
[2026-03-03 04:47:08] 2026-03-03 03:46:29,481 | INFO     | [payload] failed_post thread has finished
[2026-03-03 04:47:08] 2026-03-03 03:46:29,861 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-03 04:47:08] 2026-03-03 03:46:30,863 | INFO     | [job] queue monitor thread has finished
[2026-03-03 04:47:08] 2026-03-03 03:46:31,474 | INFO     | [data] queue_monitor thread has finished
[2026-03-03 04:47:08] 2026-03-03 03:46:37,892 | INFO     | job.realtimelogging is not enabled
[2026-03-03 04:47:08] 2026-03-03 03:46:38,897 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-03 04:47:08] 2026-03-03 03:46:52,202 [wrapper] supervise_pilot (15 min periods counter: 5)
[2026-03-03 04:47:08] 2026-03-03 03:46:56,426 | INFO     | PID=3018888 has CPU usage=5.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-03 04:47:08] 2026-03-03 03:46:56,426 | INFO     | .. there are 46 such processes running
[2026-03-03 04:47:08] 2026-03-03 03:46:56,426 | INFO     | found 0 job(s) in 20 queues
[2026-03-03 04:47:08] 2026-03-03 03:46:56,426 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-03 04:47:08] 2026-03-03 03:46:56,426 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-03 04:47:08] 2026-03-03 03:47:02,260 | INFO     | [monitor] cgroup control has ended
[2026-03-03 04:47:08] 2026-03-03 03:47:03,529 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23406175708992)>', '<ExcThread(monitor, started 23405931005696)>']
[2026-03-03 04:47:08] 2026-03-03 03:47:04,461 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-03 04:47:08] 2026-03-03 03:47:04,461 | INFO     | [monitor] control thread has ended
[2026-03-03 04:47:08] 2026-03-03 03:47:08,532 | INFO     | all workflow threads have been joined
[2026-03-03 04:47:08] 2026-03-03 03:47:08,532 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-03 04:47:08] 2026-03-03 03:47:08,532 | INFO     | traces error code: 0
[2026-03-03 04:47:08] 2026-03-03 03:47:08,532 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-03 04:47:08] 2026-03-03 03:47:08,691 [wrapper] ==== pilot stdout END ====
[2026-03-03 04:47:08] 2026-03-03 03:47:08,693 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-03 04:47:08] 2026-03-03 03:47:08,695 [wrapper] pilotpid: 3018888
[2026-03-03 04:47:08] 2026-03-03 03:47:08,698 [wrapper] Pilot exit status: 0
[2026-03-03 04:47:08] 2026-03-03 03:47:08,706 [wrapper] pandaids: 7035353070
[2026-03-03 04:47:08] 2026-03-03 03:47:08,822 [wrapper] cleanup supervisor_pilot 3543378 3018889
[2026-03-03 04:47:08] 2026-03-03 03:47:08,824 [wrapper] Test setup, not cleaning
[2026-03-03 04:47:08] 2026-03-03 03:47:08,826 [wrapper] apfmon messages muted
[2026-03-03 04:47:08] 2026-03-03 03:47:08,827 [wrapper] ==== wrapper stdout END ====
[2026-03-03 04:47:08] 2026-03-03 03:47:08,828 [wrapper] ==== wrapper stderr END ====
[2026-03-03 04:47:08]  *** Error codes and diagnostics ***
[2026-03-03 04:47:08]     "exeErrorCode": 0,
[2026-03-03 04:47:08]     "exeErrorDiag": "",
[2026-03-03 04:47:08]     "pilotErrorCode": 0,
[2026-03-03 04:47:08]     "pilotErrorDiag": "",
[2026-03-03 04:47:08]  *** Listing of results directory ***
[2026-03-03 04:47:08] total 331884
[2026-03-03 04:47:08] -rw-r--r--. 1 boinc boinc    584627 Mar  1 18:22 pilot3.tar.gz
[2026-03-03 04:47:08] -rwx------. 1 boinc boinc     36322 Mar  1 18:23 runpilot2-wrapper.sh
[2026-03-03 04:47:08] -rw-r--r--. 1 boinc boinc      5111 Mar  1 18:23 queuedata.json
[2026-03-03 04:47:08] -rw-r--r--. 1 boinc boinc       100 Mar  3 03:46 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-03 04:47:08] -rwxr-xr-x. 1 boinc boinc      7986 Mar  3 03:46 run_atlas
[2026-03-03 04:47:08] -rw-r--r--. 1 boinc boinc       105 Mar  3 03:46 job.xml
[2026-03-03 04:47:08] -rw-r--r--. 1 boinc boinc      6705 Mar  3 03:46 init_data.xml
[2026-03-03 04:47:08] -rw-r--r--. 2 boinc boinc 190080733 Mar  3 03:46 EVNT.48700856._000040.pool.root.1
[2026-03-03 04:47:08] -rw-r--r--. 2 boinc boinc     15845 Mar  3 03:46 start_atlas.sh
[2026-03-03 04:47:08] drwxrwx--x. 2 boinc boinc      4096 Mar  3 03:46 shared
[2026-03-03 04:47:08] -rw-r--r--. 2 boinc boinc    597930 Mar  3 03:46 input.tar.gz
[2026-03-03 04:47:08] -rw-r--r--. 1 boinc boinc         0 Mar  3 03:46 boinc_lockfile
[2026-03-03 04:47:08] -rw-r--r--. 1 boinc boinc      2518 Mar  3 03:46 pandaJob.out
[2026-03-03 04:47:08] -rw-------. 1 boinc boinc    997738 Mar  3 03:46 agis_schedconf.cvmfs.json
[2026-03-03 04:47:08] -rw-------. 1 boinc boinc   1512931 Mar  3 03:46 agis_ddmendpoints.agis.ALL.json
[2026-03-03 04:47:08] -rw-------. 1 boinc boinc       444 Mar  3 03:46 workernode_map.json
[2026-03-03 04:47:08] drwx------. 5 boinc boinc      4096 Mar  3 03:46 pilot3
[2026-03-03 04:47:08] -rw-------. 1 boinc boinc 144257566 Mar  3 04:45 HITS.48700858._000988.pool.root.1
[2026-03-03 04:47:08] -rw-r--r--. 1 boinc boinc       529 Mar  3 04:46 boinc_task_state.xml
[2026-03-03 04:47:08] -rw-------. 1 boinc boinc      1028 Mar  3 04:46 memory_monitor_summary.json
[2026-03-03 04:47:08] -rw-------. 1 boinc boinc        95 Mar  3 04:46 pilot_heartbeat.json
[2026-03-03 04:47:08] -rw-------. 1 boinc boinc    249262 Mar  3 04:46 log.48700858._000988.job.log.tgz.1
[2026-03-03 04:47:08] -rw-------. 1 boinc boinc      6338 Mar  3 04:46 heartbeat.json
[2026-03-03 04:47:08] -rw-r--r--. 1 boinc boinc      8192 Mar  3 04:47 boinc_mmap_file
[2026-03-03 04:47:08] -rw-r--r--. 1 boinc boinc        27 Mar  3 04:47 wrapper_checkpoint.txt
[2026-03-03 04:47:08] -rw-------. 1 boinc boinc      4901 Mar  3 04:47 pilotlog.txt
[2026-03-03 04:47:08] -rw-------. 1 boinc boinc    537880 Mar  3 04:47 log.48700858._000988.job.log.1
[2026-03-03 04:47:08] -rw-------. 1 boinc boinc       357 Mar  3 04:47 output.list
[2026-03-03 04:47:08] -rw-r--r--. 1 boinc boinc       620 Mar  3 04:47 runtime_log
[2026-03-03 04:47:08] -rw-------. 1 boinc boinc    808960 Mar  3 04:47 result.tar.gz
[2026-03-03 04:47:08] -rw-r--r--. 1 boinc boinc      9204 Mar  3 04:47 runtime_log.err
[2026-03-03 04:47:08] -rw-------. 1 boinc boinc       662 Mar  3 04:47 ZKFLDmggzG9n9Rq4apOajLDm4fhM0noT9bVooX4SDmDC9KDmjgynCn.diag
[2026-03-03 04:47:08] -rw-r--r--. 1 boinc boinc     21803 Mar  3 04:47 stderr.txt
[2026-03-03 04:47:08] HITS file was successfully produced:
[2026-03-03 04:47:08] -rw-------. 1 boinc boinc 144257566 Mar  3 04:45 shared/HITS.pool.root.1
[2026-03-03 04:47:08]  *** Contents of shared directory: ***
[2026-03-03 04:47:08] total 327908
[2026-03-03 04:47:08] -rw-r--r--. 2 boinc boinc 190080733 Mar  3 03:46 ATLAS.root_0
[2026-03-03 04:47:08] -rw-r--r--. 2 boinc boinc     15845 Mar  3 03:46 start_atlas.sh
[2026-03-03 04:47:08] -rw-r--r--. 2 boinc boinc    597930 Mar  3 03:46 input.tar.gz
[2026-03-03 04:47:08] -rw-------. 1 boinc boinc 144257566 Mar  3 04:45 HITS.pool.root.1
[2026-03-03 04:47:08] -rw-------. 1 boinc boinc    808960 Mar  3 04:47 result.tar.gz
04:47:10 (3014309): run_atlas exited; CPU time 13642.659606
04:47:10 (3014309): called boinc_finish(0)

</stderr_txt>
]]>

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