Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:51:53 (469945): wrapper (7.7.26015): starting
14:51:53 (469945): wrapper: running run_atlas (--nthreads 12)
[2026-03-01 14:51:53] Arguments: --nthreads 12
[2026-03-01 14:51:53] Threads: 12
[2026-03-01 14:51:53] Checking for CVMFS
[2026-03-01 14:51:53] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-01 14:51:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-01 14:51:54] Running cvmfs_config stat atlas.cern.ch
[2026-03-01 14:51:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-01 14:51:54] 2.11.5.0 1631262 130611 278184 156785 3 660 24288678 45568001 20821 130560 0 1217345360 99.830 650851816 25287 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2026-03-01 14:51:54] CVMFS is ok
[2026-03-01 14:51:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-01 14:51:54] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-01 14:51:54] Further information can be found at the LHC@home message board.
[2026-03-01 14:51:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-01 14:51:54] Checking for apptainer binary...
[2026-03-01 14:51:54] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-01 14:51:54] Running /usr/bin/apptainer --version
[2026-03-01 14:51:54] apptainer version 1.4.1-1.el9
[2026-03-01 14:51:54] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-01 14:51:54] wns0077.triumf.lcg
[2026-03-01 14:51:54] apptainer works
[2026-03-01 14:51:54] Set ATHENA_PROC_NUMBER=12
[2026-03-01 14:51:54] Set ATHENA_CORE_NUMBER=12
[2026-03-01 14:51:54] Starting ATLAS job with PandaID=7035543257
[2026-03-01 14:51:54] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-01 14:56:37]  *** The last 200 lines of the pilot log: ***
[2026-03-01 14:56:37] 2026-03-01 22:55:30,598 | INFO     | will not add max space = 0 B to job metrics
[2026-03-01 14:56:37] 2026-03-01 22:55:30,598 | WARNING  | wrong length of table data, x=[1772405582.0], y=[1684.0] (must be same and length>=4)
[2026-03-01 14:56:37] 2026-03-01 22:55:30,598 | INFO     | could have reported an average CPU frequency of 2746 MHz (4 samples)
[2026-03-01 14:56:37] 2026-03-01 22:55:30,598 | INFO     | ..............................
[2026-03-01 14:56:37] 2026-03-01 22:55:30,598 | INFO     | . Timing measurements:
[2026-03-01 14:56:37] 2026-03-01 22:55:30,598 | INFO     | . get job = 0 s
[2026-03-01 14:56:37] 2026-03-01 22:55:30,598 | INFO     | . initial setup = 15 s
[2026-03-01 14:56:37] 2026-03-01 22:55:30,599 | INFO     | . payload setup = 13 s
[2026-03-01 14:56:37] 2026-03-01 22:55:30,599 | INFO     | . stage-in = 0 s
[2026-03-01 14:56:37] 2026-03-01 22:55:30,599 | INFO     | . payload execution = 41 s
[2026-03-01 14:56:37] 2026-03-01 22:55:30,599 | INFO     | . stage-out = 0 s
[2026-03-01 14:56:37] 2026-03-01 22:55:30,599 | INFO     | . log creation = 0 s
[2026-03-01 14:56:37] 2026-03-01 22:55:30,599 | INFO     | ..............................
[2026-03-01 14:56:37] 2026-03-01 22:55:30,599 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-03-01 14:56:37] 2026-03-01 22:55:30,599 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7035543257/pilotlog.txt
[2026-03-01 14:56:37] 2026-03-01 22:55:30,620 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-03-01 14:56:37] - Log from pilotlog.txt -
[2026-03-01 14:56:37] 2026-03-01 22:55:30,597 | INFO     | extracted standard memory fields from prmon json
[2026-03-01 14:56:37] 2026-03-01 22:55:30,597 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-01 14:56:37] 2026-03-01 22:55:30,597 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-01 14:56:37] 2026-03-01 22:55:30,597 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-01 14:56:37] 2026-03-01 22:55:30,598 | WARNING  | found no stored workdir sizes
[2026-03-01 14:56:37] 2026-03-01 22:55:30,598 | INFO     | will not add max space = 0 B to job metrics
[2026-03-01 14:56:37] 2026-03-01 22:55:30,598 | WARNING  | wrong length of table data, x=[1772405582.0], y=[1684.0] (must be same and length>=4)
[2026-03-01 14:56:37] 2026-03-01 22:55:30,598 | INFO     | could have reported an average CPU frequency of 2746 MHz (4 samples)
[2026-03-01 14:56:37] 2026-03-01 22:55:30,598 | INFO     | ..............................
[2026-03-01 14:56:37] 2026-03-01 22:55:30,598 | INFO     | . Timing measurements:
[2026-03-01 14:56:37] 2026-03-01 22:55:30,598 | INFO     | . get job = 0 s
[2026-03-01 14:56:37] 2026-03-01 22:55:30,598 | INFO     | . initial setup = 15 s
[2026-03-01 14:56:37] 2026-03-01 22:55:30,599 | INFO     | . payload setup = 13 s
[2026-03-01 14:56:37] 2026-03-01 22:55:30,599 | INFO     | . stage-in = 0 s
[2026-03-01 14:56:37] 2026-03-01 22:55:30,599 | INFO     | . payload execution = 41 s
[2026-03-01 14:56:37] 2026-03-01 22:55:30,599 | INFO     | . stage-out = 0 s
[2026-03-01 14:56:37] 2026-03-01 22:55:30,599 | INFO     | . log creation = 0 s
[2026-03-01 14:56:37] 2026-03-01 22:55:30,599 | INFO     | ..............................
[2026-03-01 14:56:37] 2026-03-01 22:55:30,599 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-03-01 14:56:37] 2026-03-01 22:55:30,599 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7035543257/pilotlog.txt
[2026-03-01 14:56:37] 2026-03-01 22:55:30,620 | WARNING  | 
[2026-03-01 14:56:37] [begin log extracts]
[2026-03-01 14:56:37] - Log from pilotlog.txt -
[2026-03-01 14:56:37] 2026-03-01 22:55:30,597 | INFO     | extracted standard memory fields from prmon json
[2026-03-01 14:56:37] 2026-03-01 22:55:30,597 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-01 14:56:37] 2026-03-01 22:55:30,597 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-01 14:56:37] 2026-03-01 22:55:30,597 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-01 14:56:37] 2026-03-01 22:55:30,598 | WARNING  | found no stored workdir sizes
[2026-03-01 14:56:37] 2026-03-01 22:55:30,598 | INFO     | will not add max space = 0 B to job metrics
[2026-03-01 14:56:37] 2026-03-01 22:55:30,598 | WARNING  | wrong length of table data, x=[1772405582.0], y=[1684.0] (must be same and length>=4)
[2026-03-01 14:56:37] 2026-03-01 22:55:30,598 | INFO     | could have reported an average CPU frequency of 2746 MHz (4 samples)
[2026-03-01 14:56:37] 2026-03-01 22:55:30,598 | INFO     | ..............................
[2026-03-01 14:56:37] 2026-03-01 22:55:30,598 | INFO     | . Timing measurements:
[2026-03-01 14:56:37] 2026-03-01 22:55:30,598 | INFO     | . get job = 0 s
[2026-03-01 14:56:37] 2026-03-01 22:55:30,598 | INFO     | . initial setup = 15 s
[2026-03-01 14:56:37] 2026-03-01 22:55:30,599 | INFO     | . payload setup = 13 s
[2026-03-01 14:56:37] 2026-03-01 22:55:30,599 | INFO     | . stage-in = 0 s
[2026-03-01 14:56:37] 2026-03-01 22:55:30,599 | INFO     | . payload execution = 41 s
[2026-03-01 14:56:37] 2026-03-01 22:55:30,599 | INFO     | . stage-out = 0 s
[2026-03-01 14:56:37] 2026-03-01 22:55:30,599 | INFO     | . log creation = 0 s
[2026-03-01 14:56:37] 2026-03-01 22:55:30,599 | INFO     | ..............................
[2026-03-01 14:56:37] 2026-03-01 22:55:30,599 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-03-01 14:56:37] 2026-03-01 22:55:30,599 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7035543257/pilotlog.txt
[2026-03-01 14:56:37] [end log extracts]
[2026-03-01 14:56:37] 2026-03-01 22:55:30,620 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2026-03-01 14:56:37] 2026-03-01 22:55:30,621 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2026-03-01 14:56:37] 2026-03-01 22:55:30,939 | INFO     | 
[2026-03-01 14:56:37] 2026-03-01 22:55:30,940 | INFO     | job summary report
[2026-03-01 14:56:37] 2026-03-01 22:55:30,940 | INFO     | --------------------------------------------------
[2026-03-01 14:56:37] 2026-03-01 22:55:30,940 | INFO     | PanDA job id: 7035543257
[2026-03-01 14:56:37] 2026-03-01 22:55:30,940 | INFO     | task id: 48844610
[2026-03-01 14:56:37] 2026-03-01 22:55:30,941 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-03-01 14:53:22,048 CRITICAL Transform executor raised TransformValidationExceptio
[2026-03-01 14:56:37] 2026-03-01 22:55:30,941 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-01 14:56:37] 2026-03-01 22:55:30,941 | INFO     | pilot state: failed 
[2026-03-01 14:56:37] 2026-03-01 22:55:30,941 | INFO     | transexitcode: 65
[2026-03-01 14:56:37] 2026-03-01 22:55:30,941 | INFO     | exeerrorcode: 65
[2026-03-01 14:56:37] 2026-03-01 22:55:30,941 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2026-03-01 14:56:37] 2026-03-01 22:55:30,941 | INFO     | exitcode: 65
[2026-03-01 14:56:37] 2026-03-01 22:55:30,941 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2026-03-01 14:56:37] 2026-03-01 22:55:30,941 | INFO     | cpuconsumptiontime: 13 s
[2026-03-01 14:56:37] 2026-03-01 22:55:30,941 | INFO     | nevents: 0
[2026-03-01 14:56:37] 2026-03-01 22:55:30,941 | INFO     | neventsw: 0
[2026-03-01 14:56:37] 2026-03-01 22:55:30,941 | INFO     | pid: 478264
[2026-03-01 14:56:37] 2026-03-01 22:55:30,941 | INFO     | pgrp: 478264
[2026-03-01 14:56:37] 2026-03-01 22:55:30,941 | INFO     | corecount: 12
[2026-03-01 14:56:37] 2026-03-01 22:55:30,941 | INFO     | event service: False
[2026-03-01 14:56:37] 2026-03-01 22:55:30,942 | INFO     | sizes: {0: 2282323, 59: 2305628, 60: 2309948, 179: 2310086}
[2026-03-01 14:56:37] 2026-03-01 22:55:30,942 | INFO     | --------------------------------------------------
[2026-03-01 14:56:37] 2026-03-01 22:55:30,942 | INFO     | 
[2026-03-01 14:56:37] 2026-03-01 22:55:30,942 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2026-03-01 14:56:37] 2026-03-01 22:55:30,960 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-01 14:56:37] 2026-03-01 22:55:30,960 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-01 14:56:37] 2026-03-01 22:55:30,960 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-01 14:56:37] 2026-03-01 22:55:30,960 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-01 14:56:37] 2026-03-01 22:55:30,960 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-01 14:56:37] 2026-03-01 22:55:30,961 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-01 14:56:37] 2026-03-01 22:55:30,961 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-01 14:56:37] 2026-03-01 22:55:30,961 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-01 14:56:37] 2026-03-01 22:55:30,961 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-01 14:56:37] 2026-03-01 22:55:30,961 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-01 14:56:37] 2026-03-01 22:55:30,961 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-01 14:56:37] 2026-03-01 22:55:30,961 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-01 14:56:37] 2026-03-01 22:55:30,961 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-01 14:56:37] 2026-03-01 22:55:30,961 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-01 14:56:37] 2026-03-01 22:55:30,961 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-01 14:56:37] 2026-03-01 22:55:30,961 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-01 14:56:37] 2026-03-01 22:55:30,961 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-01 14:56:37] 2026-03-01 22:55:30,961 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-01 14:56:37] 2026-03-01 22:55:30,961 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-01 14:56:37] 2026-03-01 22:55:30,961 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-01 14:56:37] 2026-03-01 22:55:30,961 | INFO     | job 7035543257 has completed (purged errors)
[2026-03-01 14:56:37] 2026-03-01 22:55:30,962 | INFO     | overall cleanup function is called
[2026-03-01 14:56:37] 2026-03-01 22:55:31,522 | INFO     | PID=473685 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-01 14:56:37] 2026-03-01 22:55:31,522 | INFO     | .. there are 35 such processes running
[2026-03-01 14:56:37] 2026-03-01 22:55:31,968 | INFO     | --- collectZombieJob: --- 10, [478264]
[2026-03-01 14:56:37] 2026-03-01 22:55:31,969 | INFO     | zombie collector waiting for pid 478264
[2026-03-01 14:56:37] 2026-03-01 22:55:31,969 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-01 14:56:37] 2026-03-01 22:55:31,969 | INFO     | collected zombie processes
[2026-03-01 14:56:37] 2026-03-01 22:55:31,969 | INFO     | will attempt to kill all subprocesses of pid=478264
[2026-03-01 14:56:37] 2026-03-01 22:55:32,161 | INFO     | process IDs to be killed: [478264] (in reverse order)
[2026-03-01 14:56:37] 2026-03-01 22:55:32,242 | WARNING  | found no corresponding commands to process id(s)
[2026-03-01 14:56:37] 2026-03-01 22:55:32,242 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-01 14:56:37] 2026-03-01 22:55:32,272 | INFO     | did not find any defunct processes belonging to 478264
[2026-03-01 14:56:37] 2026-03-01 22:55:32,280 | INFO     | did not find any defunct processes belonging to 478264
[2026-03-01 14:56:37] 2026-03-01 22:55:32,280 | INFO     | ready for new job
[2026-03-01 14:56:37] 2026-03-01 22:55:32,280 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-01 14:56:37] 2026-03-01 22:55:32,281 | INFO     | **************************************
[2026-03-01 14:56:37] 2026-03-01 22:55:32,281 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-01 14:56:37] 2026-03-01 22:55:32,281 | INFO     | **************************************
[2026-03-01 14:56:37] 2026-03-01 22:55:32,282 | INFO     | 
[2026-03-01 14:56:37] 2026-03-01 22:55:32,283 | INFO     | architecture information:
[2026-03-01 14:56:37] 2026-03-01 22:55:32,284 | INFO     | executing command: cat /etc/os-release
[2026-03-01 14:56:37] 2026-03-01 22:55:32,303 | INFO     | cat /etc/os-release:
[2026-03-01 14:56:37] NAME="CentOS Linux"
[2026-03-01 14:56:37] VERSION="7 (Core)"
[2026-03-01 14:56:37] ID="centos"
[2026-03-01 14:56:37] ID_LIKE="rhel fedora"
[2026-03-01 14:56:37] VERSION_ID="7"
[2026-03-01 14:56:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-01 14:56:37] ANSI_COLOR="0;31"
[2026-03-01 14:56:37] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-01 14:56:37] HOME_URL="https://www.centos.org/"
[2026-03-01 14:56:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-01 14:56:37] 
[2026-03-01 14:56:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-01 14:56:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-01 14:56:37] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-01 14:56:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-01 14:56:37] 
[2026-03-01 14:56:37] 2026-03-01 22:55:32,303 | INFO     | **************************************
[2026-03-01 14:56:37] 2026-03-01 22:55:32,807 | INFO     | executing command: df -mP /home/boinc/slots/0
[2026-03-01 14:56:37] 2026-03-01 22:55:32,852 | INFO     | sufficient remaining disk space (1885009346560 B)
[2026-03-01 14:56:37] 2026-03-01 22:55:32,852 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-01 14:56:37] 2026-03-01 22:55:32,852 | INFO     | current server update state: UPDATING_FINAL
[2026-03-01 14:56:37] 2026-03-01 22:55:32,852 | INFO     | update_server=False
[2026-03-01 14:56:37] 2026-03-01 22:55:32,853 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-01 14:56:37] 2026-03-01 22:55:32,872 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-01 14:56:37] 2026-03-01 22:55:32,873 | INFO     | aborting loop
[2026-03-01 14:56:37] 2026-03-01 22:55:32,884 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-01 14:56:37] 2026-03-01 22:55:32,894 | INFO     | all job control threads have been joined
[2026-03-01 14:56:37] 2026-03-01 22:55:32,978 | INFO     | all payload control threads have been joined
[2026-03-01 14:56:37] 2026-03-01 22:55:33,180 | INFO     | all data control threads have been joined
[2026-03-01 14:56:37] 2026-03-01 22:55:33,858 | INFO     | [job] retrieve thread has finished
[2026-03-01 14:56:37] 2026-03-01 22:55:33,879 | INFO     | [job] job monitor thread has finished
[2026-03-01 14:56:37] 2026-03-01 22:55:33,901 | INFO     | [job] control thread has finished
[2026-03-01 14:56:37] 2026-03-01 22:55:33,984 | INFO     | [payload] control thread has finished
[2026-03-01 14:56:37] 2026-03-01 22:55:34,179 | INFO     | [payload] execute_payloads thread has finished
[2026-03-01 14:56:37] 2026-03-01 22:55:34,193 | INFO     | [data] control thread has finished
[2026-03-01 14:56:37] 2026-03-01 22:55:34,214 | INFO     | [payload] validate_pre thread has finished
[2026-03-01 14:56:37] 2026-03-01 22:55:34,414 | INFO     | [data] copytool_in thread has finished
[2026-03-01 14:56:37] 2026-03-01 22:55:34,501 | INFO     | [payload] failed_post thread has finished
[2026-03-01 14:56:37] 2026-03-01 22:55:34,891 | INFO     | [data] copytool_out thread has finished
[2026-03-01 14:56:37] 2026-03-01 22:55:35,108 | INFO     | [job] validate thread has finished
[2026-03-01 14:56:37] 2026-03-01 22:55:35,165 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-01 14:56:37] 2026-03-01 22:55:35,175 | INFO     | [job] create_data_payload thread has finished
[2026-03-01 14:56:37] 2026-03-01 22:55:35,368 | INFO     | [payload] validate_post thread has finished
[2026-03-01 14:56:37] 2026-03-01 22:55:35,585 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-01 14:56:37] 2026-03-01 22:55:35,780 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-01 14:56:37] 2026-03-01 22:55:36,786 | INFO     | [job] queue monitor thread has finished
[2026-03-01 14:56:37] 2026-03-01 22:55:39,597 | INFO     | [data] queue_monitor thread has finished
[2026-03-01 14:56:37] 2026-03-01 22:56:03,823 | INFO     | PID=473685 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-01 14:56:37] 2026-03-01 22:56:03,823 | INFO     | .. there are 35 such processes running
[2026-03-01 14:56:37] 2026-03-01 22:56:03,823 | INFO     | found 0 job(s) in 20 queues
[2026-03-01 14:56:37] 2026-03-01 22:56:03,823 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-01 14:56:37] 2026-03-01 22:56:03,823 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-01 14:56:37] 2026-03-01 22:56:31,483 | INFO     | [monitor] cgroup control has ended
[2026-03-01 14:56:37] 2026-03-01 22:56:32,009 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140217946789696)>', '<ExcThread(monitor, started 140217050720000)>']
[2026-03-01 14:56:37] 2026-03-01 22:56:32,034 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-01 14:56:37] 2026-03-01 22:56:32,035 | INFO     | [monitor] control thread has ended
[2026-03-01 14:56:37] 2026-03-01 22:56:37,035 | INFO     | all workflow threads have been joined
[2026-03-01 14:56:37] 2026-03-01 22:56:37,036 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-01 14:56:37] 2026-03-01 22:56:37,036 | INFO     | traces error code: 0
[2026-03-01 14:56:37] 2026-03-01 22:56:37,036 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-01 14:56:37] 2026-03-01 22:56:37,242 [wrapper] ==== pilot stdout END ====
[2026-03-01 14:56:37] 2026-03-01 22:56:37,253 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-01 14:56:37] 2026-03-01 22:56:37,256 [wrapper] pilotpid: 473685
[2026-03-01 14:56:37] 2026-03-01 22:56:37,259 [wrapper] Pilot exit status: 0
[2026-03-01 14:56:37] 2026-03-01 22:56:37,287 [wrapper] pandaids: 7035543257
[2026-03-01 14:56:37] 2026-03-01 22:56:37,366 [wrapper] cleanup supervisor_pilot  473691 473686
[2026-03-01 14:56:37] 2026-03-01 22:56:37,368 [wrapper] Test setup, not cleaning
[2026-03-01 14:56:37] 2026-03-01 22:56:37,371 [wrapper] apfmon messages muted
[2026-03-01 14:56:37] 2026-03-01 22:56:37,373 [wrapper] ==== wrapper stdout END ====
[2026-03-01 14:56:37] 2026-03-01 22:56:37,379 [wrapper] ==== wrapper stderr END ====
[2026-03-01 14:56:37]  *** Error codes and diagnostics ***
[2026-03-01 14:56:37]     "exeErrorCode": 65,
[2026-03-01 14:56:37]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2026-03-01 14:56:37]     "pilotErrorCode": 1305,
[2026-03-01 14:56:37]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2026-03-01 14:56:37]  *** Listing of results directory ***
[2026-03-01 14:56:37] total 252088
[2026-03-01 14:56:37] -rw-r--r--. 1 boinc boinc    584627 Mar  1 11:52 pilot3.tar.gz
[2026-03-01 14:56:37] -rwx------. 1 boinc boinc     36322 Mar  1 11:53 runpilot2-wrapper.sh
[2026-03-01 14:56:37] -rw-r--r--. 1 boinc boinc      5111 Mar  1 11:54 queuedata.json
[2026-03-01 14:56:37] -rw-r--r--. 1 boinc boinc       100 Mar  1 14:51 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-01 14:56:37] -rwxr-xr-x. 1 boinc boinc      7986 Mar  1 14:51 run_atlas
[2026-03-01 14:56:37] -rw-r--r--. 1 boinc boinc       105 Mar  1 14:51 job.xml
[2026-03-01 14:56:37] -rw-r--r--. 2 boinc boinc 254002563 Mar  1 14:51 EVNT.48448880._000003.pool.root.1
[2026-03-01 14:56:37] -rw-r--r--. 1 boinc boinc      6593 Mar  1 14:51 init_data.xml
[2026-03-01 14:56:37] -rw-r--r--. 2 boinc boinc     15845 Mar  1 14:51 start_atlas.sh
[2026-03-01 14:56:37] drwxrwx--x. 2 boinc boinc      4096 Mar  1 14:51 shared
[2026-03-01 14:56:37] -rw-r--r--. 2 boinc boinc    597967 Mar  1 14:51 input.tar.gz
[2026-03-01 14:56:37] -rw-r--r--. 1 boinc boinc         0 Mar  1 14:51 boinc_lockfile
[2026-03-01 14:56:37] -rw-r--r--. 1 boinc boinc      2602 Mar  1 14:51 pandaJob.out
[2026-03-01 14:56:37] -rw-------. 1 boinc boinc    998184 Mar  1 14:52 agis_schedconf.cvmfs.json
[2026-03-01 14:56:37] -rw-------. 1 boinc boinc   1513015 Mar  1 14:52 agis_ddmendpoints.agis.ALL.json
[2026-03-01 14:56:37] -rw-------. 1 boinc boinc       445 Mar  1 14:52 workernode_map.json
[2026-03-01 14:56:37] drwx------. 5 boinc boinc      4096 Mar  1 14:52 pilot3
[2026-03-01 14:56:37] -rw-r--r--. 1 boinc boinc       522 Mar  1 14:53 boinc_task_state.xml
[2026-03-01 14:56:37] -rw-------. 1 boinc boinc       989 Mar  1 14:53 memory_monitor_summary.json
[2026-03-01 14:56:37] -rw-------. 1 boinc boinc     21238 Mar  1 14:53 log.48844610._000069.job.log.tgz.1
[2026-03-01 14:56:37] -rw-------. 1 boinc boinc        95 Mar  1 14:55 pilot_heartbeat.json
[2026-03-01 14:56:37] -rw-------. 1 boinc boinc      7024 Mar  1 14:55 heartbeat.json
[2026-03-01 14:56:37] -rw-r--r--. 1 boinc boinc      8192 Mar  1 14:56 boinc_mmap_file
[2026-03-01 14:56:37] -rw-r--r--. 1 boinc boinc        22 Mar  1 14:56 wrapper_checkpoint.txt
[2026-03-01 14:56:37] -rw-------. 1 boinc boinc      4818 Mar  1 14:56 pilotlog.txt
[2026-03-01 14:56:37] -rw-------. 1 boinc boinc     83725 Mar  1 14:56 log.48844610._000069.job.log.1
[2026-03-01 14:56:37] -rw-------. 1 boinc boinc       188 Mar  1 14:56 output.list
[2026-03-01 14:56:37] -rw-r--r--. 1 boinc boinc       620 Mar  1 14:56 runtime_log
[2026-03-01 14:56:37] -rw-------. 1 boinc boinc    122880 Mar  1 14:56 result.tar.gz
[2026-03-01 14:56:37] -rw-------. 1 boinc boinc       644 Mar  1 14:56 YtyKDmI21G9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmqXBLDmIbXg0n.diag
[2026-03-01 14:56:37] -rw-r--r--. 1 boinc boinc      8635 Mar  1 14:56 runtime_log.err
[2026-03-01 14:56:37] -rw-r--r--. 1 boinc boinc     21723 Mar  1 14:56 stderr.txt
[2026-03-01 14:56:37] No HITS result produced
[2026-03-01 14:56:37]  *** Contents of shared directory: ***
[2026-03-01 14:56:37] total 248776
[2026-03-01 14:56:37] -rw-r--r--. 2 boinc boinc 254002563 Mar  1 14:51 ATLAS.root_0
[2026-03-01 14:56:37] -rw-r--r--. 2 boinc boinc     15845 Mar  1 14:51 start_atlas.sh
[2026-03-01 14:56:37] -rw-r--r--. 2 boinc boinc    597967 Mar  1 14:51 input.tar.gz
[2026-03-01 14:56:37] -rw-------. 1 boinc boinc    122880 Mar  1 14:56 result.tar.gz
14:56:39 (469945): run_atlas exited; CPU time 19.708862
14:56:39 (469945): called boinc_finish(0)

</stderr_txt>
]]>

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