Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:00:13 (101893): wrapper (7.7.26015): starting
00:00:13 (101893): wrapper: running run_atlas (--nthreads 8)
[2026-03-02 00:00:13] Arguments: --nthreads 8
[2026-03-02 00:00:13] Threads: 8
[2026-03-02 00:00:13] Checking for CVMFS
[2026-03-02 00:00:14] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-02 00:00:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-02 00:00:14] Running cvmfs_config stat atlas.cern.ch
[2026-03-02 00:00:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-02 00:00:15] 2.13.3.0 10228 98489 225780 156795 1 345 28285311 32935936 26938 16776704 0 436378038 99.773 285605493 33277 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-03-02 00:00:15] CVMFS is ok
[2026-03-02 00:00:15] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-02 00:00:15] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-02 00:00:15] Further information can be found at the LHC@home message board.
[2026-03-02 00:00:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-02 00:00:15] Checking for apptainer binary...
[2026-03-02 00:00:15] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-02 00:00:15] Running /usr/bin/apptainer --version
[2026-03-02 00:00:15] apptainer version 1.4.5-2.el9
[2026-03-02 00:00:15] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-02 00:00:15] c-8-1.aglt2.org
[2026-03-02 00:00:15] apptainer works
[2026-03-02 00:00:15] Set ATHENA_PROC_NUMBER=8
[2026-03-02 00:00:15] Set ATHENA_CORE_NUMBER=8
[2026-03-02 00:00:15] Starting ATLAS job with PandaID=7035212404
[2026-03-02 00:00:15] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-02 19:45:40]  *** The last 200 lines of the pilot log: ***
[2026-03-02 19:45:40] 2026-03-03 00:44:21,041 | INFO     | extracted standard memory fields from prmon json
[2026-03-02 19:45:40] 2026-03-03 00:44:21,041 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-02 19:45:40] 2026-03-03 00:44:21,064 | INFO     | monitor loop #2989: job 0:7035212404 is in state 'finished'
[2026-03-02 19:45:40] 2026-03-03 00:44:21,065 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-02 19:45:40] 2026-03-03 00:44:21,078 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-02 19:45:40] 2026-03-03 00:44:21,079 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-02 19:45:40] 2026-03-03 00:44:21,257 | INFO     | fitting pss+swap vs Time
[2026-03-02 19:45:40] 2026-03-03 00:44:21,277 | INFO     | sum of square deviations: 485241241287.5505
[2026-03-02 19:45:40] 2026-03-03 00:44:22,005 | INFO     | sum of deviations: 800924614830.0828
[2026-03-02 19:45:40] 2026-03-03 00:44:22,005 | INFO     | mean x: 1772463211.857881
[2026-03-02 19:45:40] 2026-03-03 00:44:22,005 | INFO     | mean y: 2505027.570198105
[2026-03-02 19:45:40] 2026-03-03 00:44:22,005 | INFO     | intersect: -2923069500.041964
[2026-03-02 19:45:40] 2026-03-03 00:44:22,007 | INFO     | chi2: 6.154052000265619
[2026-03-02 19:45:40] 2026-03-03 00:44:22,012 | INFO     | sum of square deviations: 478998779556.0158
[2026-03-02 19:45:40] 2026-03-03 00:44:22,089 | INFO     | sum of deviations: 1018393112164.2344
[2026-03-02 19:45:40] 2026-03-03 00:44:22,090 | INFO     | mean x: 1772463059.3589966
[2026-03-02 19:45:40] 2026-03-03 00:44:22,090 | INFO     | mean y: 2510330.857266436
[2026-03-02 19:45:40] 2026-03-03 00:44:22,090 | INFO     | intersect: -3765900463.194993
[2026-03-02 19:45:40] 2026-03-03 00:44:22,092 | INFO     | chi2: 4.06639997798239
[2026-03-02 19:45:40] 2026-03-03 00:44:22,092 | INFO     | current chi2=4.06639997798239 (change=33.923210629242696 %)
[2026-03-02 19:45:40] 2026-03-03 00:44:22,094 | INFO     | sum of square deviations: 472810296488.3082
[2026-03-02 19:45:40] 2026-03-03 00:44:22,720 | INFO     | sum of deviations: 1012964581321.7281
[2026-03-02 19:45:40] 2026-03-03 00:44:22,720 | INFO     | mean x: 1772462906.862728
[2026-03-02 19:45:40] 2026-03-03 00:44:22,720 | INFO     | mean y: 2510197.086880973
[2026-03-02 19:45:40] 2026-03-03 00:44:22,720 | INFO     | intersect: -3794873573.304199
[2026-03-02 19:45:40] 2026-03-03 00:44:22,764 | INFO     | chi2: 4.065978743724149
[2026-03-02 19:45:40] 2026-03-03 00:44:22,764 | INFO     | current chi2=4.065978743724149 (change=0.010358898793069301 %)
[2026-03-02 19:45:40] 2026-03-03 00:44:22,764 | INFO     | right removable region: 1150
[2026-03-02 19:45:40] 2026-03-03 00:44:22,766 | INFO     | sum of square deviations: 478998099953.94806
[2026-03-02 19:45:40] 2026-03-03 00:44:23,637 | INFO     | sum of deviations: 455398392975.4076
[2026-03-02 19:45:40] 2026-03-03 00:44:23,637 | INFO     | mean x: 1772463364.365052
[2026-03-02 19:45:40] 2026-03-03 00:44:23,637 | INFO     | mean y: 2513464.8070934257
[2026-03-02 19:45:40] 2026-03-03 00:44:23,637 | INFO     | intersect: -1682622588.5869238
[2026-03-02 19:45:40] 2026-03-03 00:44:23,639 | INFO     | chi2: 3.031094732859453
[2026-03-02 19:45:40] 2026-03-03 00:44:23,639 | INFO     | current chi2=3.031094732859453 (change=50.74635812748046 %)
[2026-03-02 19:45:40] 2026-03-03 00:44:23,645 | INFO     | sum of square deviations: 472808938866.4559
[2026-03-02 19:45:40] 2026-03-03 00:44:23,682 | INFO     | monitor loop #2990: job 0:7035212404 is in state 'finished'
[2026-03-02 19:45:40] 2026-03-03 00:44:23,682 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-02 19:45:40] 2026-03-03 00:44:23,764 | INFO     | sum of deviations: 301728231599.4398
[2026-03-02 19:45:40] 2026-03-03 00:44:23,764 | INFO     | mean x: 1772463516.8696785
[2026-03-02 19:45:40] 2026-03-03 00:44:23,764 | INFO     | mean y: 2517249.296264118
[2026-03-02 19:45:40] 2026-03-03 00:44:23,764 | INFO     | intersect: -1128599864.948198
[2026-03-02 19:45:40] 2026-03-03 00:44:23,771 | INFO     | chi2: 2.4177977177087002
[2026-03-02 19:45:40] 2026-03-03 00:44:23,771 | INFO     | current chi2=2.4177977177087002 (change=20.233515254476554 %)
[2026-03-02 19:45:40] 2026-03-03 00:44:23,771 | INFO     | left removable region: 20
[2026-03-02 19:45:40] 2026-03-03 00:44:23,773 | INFO     | sum of square deviations: 447397652675.5434
[2026-03-02 19:45:40] 2026-03-03 00:44:24,120 | INFO     | sum of deviations: 372141476133.164
[2026-03-02 19:45:40] 2026-03-03 00:44:24,120 | INFO     | mean x: 1772463486.3849556
[2026-03-02 19:45:40] 2026-03-03 00:44:24,120 | INFO     | mean y: 2526204.9743362833
[2026-03-02 19:45:40] 2026-03-03 00:44:24,121 | INFO     | intersect: -1471793506.519064
[2026-03-02 19:45:40] 2026-03-03 00:44:24,122 | INFO     | chi2: 0.06679116225871183
[2026-03-02 19:45:40] 2026-03-03 00:44:24,122 | INFO     | current memory leak: 0.83 B/s (using 1130 data points, chi2=0.07)
[2026-03-02 19:45:40] 2026-03-03 00:44:24,299 | INFO     | could have reported an average CPU frequency of 2600 MHz (43 samples)
[2026-03-02 19:45:40] 2026-03-03 00:44:24,300 | INFO     | ..............................
[2026-03-02 19:45:40] 2026-03-03 00:44:24,300 | INFO     | . Timing measurements:
[2026-03-02 19:45:40] 2026-03-03 00:44:24,300 | INFO     | . get job = 0 s
[2026-03-02 19:45:40] 2026-03-03 00:44:24,300 | INFO     | . initial setup = 46 s
[2026-03-02 19:45:40] 2026-03-03 00:44:24,300 | INFO     | . payload setup = 55 s
[2026-03-02 19:45:40] 2026-03-03 00:44:24,300 | INFO     | . stage-in = 0 s
[2026-03-02 19:45:40] 2026-03-03 00:44:24,300 | INFO     | . payload execution = 70862 s
[2026-03-02 19:45:40] 2026-03-03 00:44:24,301 | INFO     | . stage-out = 12 s
[2026-03-02 19:45:40] 2026-03-03 00:44:24,301 | INFO     | . log creation = 1 s
[2026-03-02 19:45:40] 2026-03-03 00:44:24,301 | INFO     | ..............................
[2026-03-02 19:45:40] 2026-03-03 00:44:24,732 | INFO     | 
[2026-03-02 19:45:40] 2026-03-03 00:44:24,733 | INFO     | job summary report
[2026-03-02 19:45:40] 2026-03-03 00:44:24,733 | INFO     | --------------------------------------------------
[2026-03-02 19:45:40] 2026-03-03 00:44:24,733 | INFO     | PanDA job id: 7035212404
[2026-03-02 19:45:40] 2026-03-03 00:44:24,733 | INFO     | task id: 48838447
[2026-03-02 19:45:40] 2026-03-03 00:44:24,733 | INFO     | errors: (none)
[2026-03-02 19:45:40] 2026-03-03 00:44:24,733 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-02 19:45:40] 2026-03-03 00:44:24,733 | INFO     | pilot state: finished 
[2026-03-02 19:45:40] 2026-03-03 00:44:24,733 | INFO     | transexitcode: 0
[2026-03-02 19:45:40] 2026-03-03 00:44:24,733 | INFO     | exeerrorcode: 0
[2026-03-02 19:45:40] 2026-03-03 00:44:24,734 | INFO     | exeerrordiag: 
[2026-03-02 19:45:40] 2026-03-03 00:44:24,734 | INFO     | exitcode: 0
[2026-03-02 19:45:40] 2026-03-03 00:44:24,734 | INFO     | exitmsg: OK
[2026-03-02 19:45:40] 2026-03-03 00:44:24,734 | INFO     | cpuconsumptiontime: 54222 s
[2026-03-02 19:45:40] 2026-03-03 00:44:24,734 | INFO     | nevents: 400
[2026-03-02 19:45:40] 2026-03-03 00:44:24,734 | INFO     | neventsw: 0
[2026-03-02 19:45:40] 2026-03-03 00:44:24,734 | INFO     | pid: 129135
[2026-03-02 19:45:40] 2026-03-03 00:44:24,734 | INFO     | pgrp: 129135
[2026-03-02 19:45:40] 2026-03-03 00:44:24,734 | INFO     | corecount: 8
[2026-03-02 19:45:40] 2026-03-03 00:44:24,734 | INFO     | event service: False
[2026-03-02 19:45:40] 2026-03-03 00:44:24,735 | INFO     | sizes: {0: 2281192, 1: 2281793, 2: 2281877, 3: 2281933, 5: 2281933, 7: 2282550, 8: 2282550, 70924: 2336643, 70926: 2336642, 70939: 2345696, 70940: 2345752, 70945: 
[2026-03-02 19:45:40] 2026-03-03 00:44:24,735 | INFO     | --------------------------------------------------
[2026-03-02 19:45:40] 2026-03-03 00:44:24,735 | INFO     | 
[2026-03-02 19:45:40] 2026-03-03 00:44:24,735 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-03-02 19:45:40] 2026-03-03 00:44:25,064 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-02 19:45:40] 2026-03-03 00:44:25,064 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-02 19:45:40] 2026-03-03 00:44:25,064 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-02 19:45:40] 2026-03-03 00:44:25,064 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-02 19:45:40] 2026-03-03 00:44:25,064 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-02 19:45:40] 2026-03-03 00:44:25,065 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-02 19:45:40] 2026-03-03 00:44:25,065 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-02 19:45:40] 2026-03-03 00:44:25,065 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-02 19:45:40] 2026-03-03 00:44:25,065 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-02 19:45:40] 2026-03-03 00:44:25,065 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-02 19:45:40] 2026-03-03 00:44:25,065 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-02 19:45:40] 2026-03-03 00:44:25,065 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-02 19:45:40] 2026-03-03 00:44:25,065 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-02 19:45:40] 2026-03-03 00:44:25,066 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-02 19:45:40] 2026-03-03 00:44:25,066 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-02 19:45:40] 2026-03-03 00:44:25,066 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-02 19:45:40] 2026-03-03 00:44:25,066 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-02 19:45:40] 2026-03-03 00:44:25,066 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-02 19:45:40] 2026-03-03 00:44:25,066 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-02 19:45:40] 2026-03-03 00:44:25,066 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-02 19:45:40] 2026-03-03 00:44:25,066 | INFO     | job 7035212404 has completed (purged errors)
[2026-03-02 19:45:40] 2026-03-03 00:44:25,067 | INFO     | overall cleanup function is called
[2026-03-02 19:45:40] 2026-03-03 00:44:25,355 | INFO     | PID=108273 has CPU usage=10.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-02 19:45:40] 2026-03-03 00:44:25,355 | INFO     | .. there are 42 such processes running
[2026-03-02 19:45:40] 2026-03-03 00:44:26,171 | INFO     | --- collectZombieJob: --- 10, [129135]
[2026-03-02 19:45:40] 2026-03-03 00:44:26,172 | INFO     | zombie collector waiting for pid 129135
[2026-03-02 19:45:40] 2026-03-03 00:44:26,172 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-02 19:45:40] 2026-03-03 00:44:26,172 | INFO     | collected zombie processes
[2026-03-02 19:45:40] 2026-03-03 00:44:26,172 | INFO     | will attempt to kill all subprocesses of pid=129135
[2026-03-02 19:45:40] 2026-03-03 00:44:31,937 | INFO     | process IDs to be killed: [129135] (in reverse order)
[2026-03-02 19:45:40] 2026-03-03 00:44:33,234 | WARNING  | found no corresponding commands to process id(s)
[2026-03-02 19:45:40] 2026-03-03 00:44:33,288 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-02 19:45:40] 2026-03-03 00:44:33,833 | INFO     | did not find any defunct processes belonging to 129135
[2026-03-02 19:45:40] 2026-03-03 00:44:34,058 | INFO     | did not find any defunct processes belonging to 129135
[2026-03-02 19:45:40] 2026-03-03 00:44:34,058 | INFO     | ready for new job
[2026-03-02 19:45:40] 2026-03-03 00:44:34,058 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-02 19:45:40] 2026-03-03 00:44:34,194 | INFO     | **************************************
[2026-03-02 19:45:40] 2026-03-03 00:44:34,194 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-02 19:45:40] 2026-03-03 00:44:34,194 | INFO     | **************************************
[2026-03-02 19:45:40] 2026-03-03 00:44:34,194 | INFO     | 
[2026-03-02 19:45:40] 2026-03-03 00:44:34,196 | INFO     | architecture information:
[2026-03-02 19:45:40] 2026-03-03 00:44:34,216 | INFO     | executing command: cat /etc/os-release
[2026-03-02 19:45:40] 2026-03-03 00:44:34,540 | INFO     | cat /etc/os-release:
[2026-03-02 19:45:40] NAME="CentOS Linux"
[2026-03-02 19:45:40] VERSION="7 (Core)"
[2026-03-02 19:45:40] ID="centos"
[2026-03-02 19:45:40] ID_LIKE="rhel fedora"
[2026-03-02 19:45:40] VERSION_ID="7"
[2026-03-02 19:45:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-02 19:45:40] ANSI_COLOR="0;31"
[2026-03-02 19:45:40] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-02 19:45:40] HOME_URL="https://www.centos.org/"
[2026-03-02 19:45:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-02 19:45:40] 
[2026-03-02 19:45:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-02 19:45:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-02 19:45:40] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-02 19:45:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-02 19:45:40] 
[2026-03-02 19:45:40] 2026-03-03 00:44:34,540 | INFO     | **************************************
[2026-03-02 19:45:40] 2026-03-03 00:44:35,043 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-03-02 19:45:40] 2026-03-03 00:44:35,368 | INFO     | sufficient remaining disk space (74325164032 B)
[2026-03-02 19:45:40] 2026-03-03 00:44:35,368 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-02 19:45:40] 2026-03-03 00:44:35,368 | INFO     | current server update state: UPDATING_FINAL
[2026-03-02 19:45:40] 2026-03-03 00:44:35,368 | INFO     | update_server=False
[2026-03-02 19:45:40] 2026-03-03 00:44:35,369 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-02 19:45:40] 2026-03-03 00:44:35,369 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-02 19:45:40] 2026-03-03 00:44:35,369 | INFO     | aborting loop
[2026-03-02 19:45:40] 2026-03-03 00:44:35,374 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-02 19:45:40] 2026-03-03 00:44:35,392 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-02 19:45:40] 2026-03-03 00:44:35,423 | INFO     | all data control threads have been joined
[2026-03-02 19:45:40] 2026-03-03 00:44:36,375 | INFO     | [job] job monitor thread has finished
[2026-03-02 19:45:40] 2026-03-03 00:44:36,394 | INFO     | [job] retrieve thread has finished
[2026-03-02 19:45:40] 2026-03-03 00:44:36,434 | INFO     | [data] control thread has finished
[2026-03-02 19:45:40] 2026-03-03 00:44:36,651 | INFO     | all payload control threads have been joined
[2026-03-02 19:45:40] 2026-03-03 00:44:36,858 | INFO     | [job] validate thread has finished
[2026-03-02 19:45:40] 2026-03-03 00:44:36,867 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-02 19:45:40] 2026-03-03 00:44:36,875 | INFO     | [data] copytool_in thread has finished
[2026-03-02 19:45:40] 2026-03-03 00:44:37,212 | INFO     | all job control threads have been joined
[2026-03-02 19:45:40] 2026-03-03 00:44:37,477 | INFO     | [data] copytool_out thread has finished
[2026-03-02 19:45:40] 2026-03-03 00:44:37,684 | INFO     | [payload] control thread has finished
[2026-03-02 19:45:40] 2026-03-03 00:44:37,703 | INFO     | [job] create_data_payload thread has finished
[2026-03-02 19:45:40] 2026-03-03 00:44:37,748 | INFO     | [payload] execute_payloads thread has finished
[2026-03-02 19:45:40] 2026-03-03 00:44:37,749 | INFO     | [payload] validate_pre thread has finished
[2026-03-02 19:45:40] 2026-03-03 00:44:37,887 | INFO     | [payload] failed_post thread has finished
[2026-03-02 19:45:40] 2026-03-03 00:44:37,927 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-02 19:45:40] 2026-03-03 00:44:37,933 | INFO     | [payload] validate_post thread has finished
[2026-03-02 19:45:40] 2026-03-03 00:44:38,223 | INFO     | [job] control thread has finished
[2026-03-02 19:45:40] 2026-03-03 00:44:38,932 | INFO     | [job] queue monitor thread has finished
[2026-03-02 19:45:40] 2026-03-03 00:44:39,484 | INFO     | [data] queue_monitor thread has finished
[2026-03-02 19:45:40] 2026-03-03 00:44:59,629 | INFO     | PID=108273 has CPU usage=4.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-02 19:45:40] 2026-03-03 00:44:59,629 | INFO     | .. there are 42 such processes running
[2026-03-02 19:45:40] 2026-03-03 00:44:59,630 | INFO     | found 0 job(s) in 20 queues
[2026-03-02 19:45:40] 2026-03-03 00:44:59,630 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-02 19:45:40] 2026-03-03 00:44:59,630 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-02 19:45:40] 2026-03-03 00:45:29,459 | INFO     | [monitor] cgroup control has ended
[2026-03-02 19:45:40] 2026-03-03 00:45:30,366 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139978004965184)>', '<ExcThread(monitor, started 139977455290112)>']
[2026-03-02 19:45:40] 2026-03-03 00:45:31,201 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-02 19:45:40] 2026-03-03 00:45:31,202 | INFO     | [monitor] control thread has ended
[2026-03-02 19:45:40] 2026-03-03 00:45:35,405 | INFO     | all workflow threads have been joined
[2026-03-02 19:45:40] 2026-03-03 00:45:35,454 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-02 19:45:40] 2026-03-03 00:45:35,455 | INFO     | traces error code: 0
[2026-03-02 19:45:40] 2026-03-03 00:45:35,455 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-02 19:45:40] 2026-03-03 00:45:38,268 [wrapper] ==== pilot stdout END ====
[2026-03-02 19:45:40] 2026-03-03 00:45:38,282 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-02 19:45:40] 2026-03-03 00:45:38,309 [wrapper] pilotpid: 108273
[2026-03-02 19:45:40] 2026-03-03 00:45:38,328 [wrapper] Pilot exit status: 0
[2026-03-02 19:45:40] 2026-03-03 00:45:38,521 [wrapper] pandaids: 7035212404
[2026-03-02 19:45:40] 2026-03-03 00:45:38,909 [wrapper] cleanup supervisor_pilot 3859613 108274
[2026-03-02 19:45:40] 2026-03-03 00:45:38,941 [wrapper] Test setup, not cleaning
[2026-03-02 19:45:40] 2026-03-03 00:45:38,945 [wrapper] apfmon messages muted
[2026-03-02 19:45:40] 2026-03-03 00:45:38,947 [wrapper] ==== wrapper stdout END ====
[2026-03-02 19:45:40] 2026-03-03 00:45:38,951 [wrapper] ==== wrapper stderr END ====
[2026-03-02 19:45:40]  *** Error codes and diagnostics ***
[2026-03-02 19:45:40]     "exeErrorCode": 0,
[2026-03-02 19:45:40]     "exeErrorDiag": "",
[2026-03-02 19:45:40]     "pilotErrorCode": 0,
[2026-03-02 19:45:40]     "pilotErrorDiag": "",
[2026-03-02 19:45:40]  *** Listing of results directory ***
[2026-03-02 19:45:40] total 501404
[2026-03-02 19:45:40] -rw-r--r--. 1 boincer umatlas      5111 Mar  1 11:16 queuedata.json
[2026-03-02 19:45:40] -rwx------. 1 boincer umatlas     36322 Mar  1 11:16 runpilot2-wrapper.sh
[2026-03-02 19:45:40] -rw-r--r--. 1 boincer umatlas    584627 Mar  1 11:16 pilot3.tar.gz
[2026-03-02 19:45:40] -rw-r--r--. 1 boincer umatlas       100 Mar  2 00:00 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-02 19:45:40] -rwxr-xr-x. 1 boincer umatlas      7986 Mar  2 00:00 run_atlas
[2026-03-02 19:45:40] -rw-r--r--. 1 boincer umatlas       105 Mar  2 00:00 job.xml
[2026-03-02 19:45:40] -rw-r--r--. 2 boincer umatlas 281625932 Mar  2 00:00 EVNT.48220117._000095.pool.root.1
[2026-03-02 19:45:40] -rw-r--r--. 2 boincer umatlas     15845 Mar  2 00:00 start_atlas.sh
[2026-03-02 19:45:40] drwxrwx--x. 2 boincer umatlas      4096 Mar  2 00:00 shared
[2026-03-02 19:45:40] -rw-r--r--. 2 boincer umatlas    597966 Mar  2 00:00 input.tar.gz
[2026-03-02 19:45:40] -rw-r--r--. 1 boincer umatlas         0 Mar  2 00:00 boinc_lockfile
[2026-03-02 19:45:40] -rw-r--r--. 1 boincer umatlas      2571 Mar  2 00:00 pandaJob.out
[2026-03-02 19:45:40] -rw-------. 1 boincer umatlas        57 Mar  2 00:00 setup.sh.local
[2026-03-02 19:45:40] -rw-------. 1 boincer umatlas    998242 Mar  2 00:01 agis_schedconf.cvmfs.json
[2026-03-02 19:45:40] -rw-------. 1 boincer umatlas       438 Mar  2 00:01 workernode_map.json
[2026-03-02 19:45:40] drwx------. 5 boincer umatlas      4096 Mar  2 00:01 pilot3
[2026-03-02 19:45:40] -rw-r--r--. 1 boincer umatlas      6659 Mar  2 19:39 init_data.xml
[2026-03-02 19:45:40] -rw-------. 1 boincer umatlas 211690205 Mar  2 19:40 HITS.48838447._002358.pool.root.1
[2026-03-02 19:45:40] -rw-r--r--. 1 boincer umatlas       531 Mar  2 19:40 boinc_task_state.xml
[2026-03-02 19:45:40] -rw-------. 1 boincer umatlas      1044 Mar  2 19:43 memory_monitor_summary.json
[2026-03-02 19:45:40] -rw-------. 1 boincer umatlas   1512931 Mar  2 19:44 agis_ddmendpoints.agis.ALL.json
[2026-03-02 19:45:40] -rw-------. 1 boincer umatlas   1050348 Mar  2 19:44 log.48838447._002358.job.log.tgz.1
[2026-03-02 19:45:40] -rw-------. 1 boincer umatlas      6386 Mar  2 19:44 heartbeat.json
[2026-03-02 19:45:40] -rw-------. 1 boincer umatlas        95 Mar  2 19:44 pilot_heartbeat.json
[2026-03-02 19:45:40] -rw-r--r--. 1 boincer umatlas      8192 Mar  2 19:45 boinc_mmap_file
[2026-03-02 19:45:40] -rw-r--r--. 1 boincer umatlas        28 Mar  2 19:45 wrapper_checkpoint.txt
[2026-03-02 19:45:40] -rw-------. 1 boincer umatlas      4819 Mar  2 19:45 pilotlog.txt
[2026-03-02 19:45:40] -rw-------. 1 boincer umatlas   7045357 Mar  2 19:45 log.48838447._002358.job.log.1
[2026-03-02 19:45:40] -rw-------. 1 boincer umatlas       357 Mar  2 19:45 output.list
[2026-03-02 19:45:40] -rw-r--r--. 1 boincer umatlas       620 Mar  2 19:45 runtime_log
[2026-03-02 19:45:40] -rw-------. 1 boincer umatlas   8110080 Mar  2 19:45 result.tar.gz
[2026-03-02 19:45:40] -rw-------. 1 boincer umatlas       655 Mar  2 19:45 rvXMDmvdyG9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDm41ALDmWAy2Vn.diag
[2026-03-02 19:45:40] -rw-r--r--. 1 boincer umatlas      9327 Mar  2 19:45 runtime_log.err
[2026-03-02 19:45:40] -rw-r--r--. 1 boincer umatlas     21305 Mar  2 19:45 stderr.txt
[2026-03-02 19:45:40] HITS file was successfully produced:
[2026-03-02 19:45:40] -rw-------. 1 boincer umatlas 211690205 Mar  2 19:40 shared/HITS.pool.root.1
[2026-03-02 19:45:40]  *** Contents of shared directory: ***
[2026-03-02 19:45:40] total 490284
[2026-03-02 19:45:40] -rw-r--r--. 2 boincer umatlas 281625932 Mar  2 00:00 ATLAS.root_0
[2026-03-02 19:45:40] -rw-r--r--. 2 boincer umatlas     15845 Mar  2 00:00 start_atlas.sh
[2026-03-02 19:45:40] -rw-r--r--. 2 boincer umatlas    597966 Mar  2 00:00 input.tar.gz
[2026-03-02 19:45:40] -rw-------. 1 boincer umatlas 211690205 Mar  2 19:40 HITS.pool.root.1
[2026-03-02 19:45:40] -rw-------. 1 boincer umatlas   8110080 Mar  2 19:45 result.tar.gz
19:45:41 (101893): run_atlas exited; CPU time 57165.799184
19:45:41 (101893): called boinc_finish(0)

</stderr_txt>
]]>

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