Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
16:00:09 (2633202): wrapper (7.7.26015): starting
16:00:09 (2633202): wrapper: running run_atlas (--nthreads 9)
[2026-03-01 16:00:09] Arguments: --nthreads 9
[2026-03-01 16:00:09] Threads: 9
[2026-03-01 16:00:09] Checking for CVMFS
[2026-03-01 16:00:09] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-01 16:00:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-01 16:00:10] Running cvmfs_config stat atlas.cern.ch
[2026-03-01 16:00:11] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-01 16:00:11] 2.13.3.0 10955 96862 348956 156782 0 355 22547442 40960000 22925 16776704 0 211176182 99.635 223670390 34327 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-03-01 16:00:11] CVMFS is ok
[2026-03-01 16:00:11] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-01 16:00:11] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-01 16:00:11] Further information can be found at the LHC@home message board.
[2026-03-01 16:00:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-01 16:00:11] Checking for apptainer binary...
[2026-03-01 16:00:11] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-01 16:00:11] Running /usr/bin/apptainer --version
[2026-03-01 16:00:11] apptainer version 1.4.5-2.el9
[2026-03-01 16:00:11] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-01 16:00:12] c-211-33-1.aglt2.org
[2026-03-01 16:00:12] apptainer works
[2026-03-01 16:00:12] Set ATHENA_PROC_NUMBER=9
[2026-03-01 16:00:12] Set ATHENA_CORE_NUMBER=9
[2026-03-01 16:00:12] Starting ATLAS job with PandaID=7034441755
[2026-03-01 16:00:12] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-01 19:25:15]  *** The last 200 lines of the pilot log: ***
[2026-03-01 19:25:15] 2026-03-02 00:24:37,503 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-7034441755/memory_monitor_summary.json (trf name=prmon)
[2026-03-01 19:25:15] 2026-03-02 00:24:37,504 | INFO     | extracted standard info from prmon json
[2026-03-01 19:25:15] 2026-03-02 00:24:37,504 | INFO     | extracted standard memory fields from prmon json
[2026-03-01 19:25:15] 2026-03-02 00:24:37,504 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-01 19:25:15] 2026-03-02 00:24:37,505 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-01 19:25:15] 2026-03-02 00:24:37,505 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-01 19:25:15] 2026-03-02 00:24:37,531 | INFO     | fitting pss+swap vs Time
[2026-03-01 19:25:15] 2026-03-02 00:24:37,531 | INFO     | sum of square deviations: 2443610757.1356626
[2026-03-01 19:25:15] 2026-03-02 00:24:37,532 | INFO     | sum of deviations: 30254872610.26635
[2026-03-01 19:25:15] 2026-03-02 00:24:37,555 | INFO     | mean x: 1772405012.2110553
[2026-03-01 19:25:15] 2026-03-02 00:24:37,555 | INFO     | mean y: 2517773.969849246
[2026-03-01 19:25:15] 2026-03-02 00:24:37,555 | INFO     | intersect: -21942011526.228348
[2026-03-01 19:25:15] 2026-03-02 00:24:37,555 | INFO     | chi2: 3.916281718140285
[2026-03-01 19:25:15] 2026-03-02 00:24:37,556 | INFO     | sum of square deviations: 2264020199.407216
[2026-03-01 19:25:15] 2026-03-02 00:24:37,557 | INFO     | sum of deviations: 56983860422.3196
[2026-03-01 19:25:15] 2026-03-02 00:24:37,557 | INFO     | mean x: 1772404859.7164948
[2026-03-01 19:25:15] 2026-03-02 00:24:37,557 | INFO     | mean y: 2540108.587628866
[2026-03-01 19:25:15] 2026-03-02 00:24:37,557 | INFO     | intersect: -44607694006.97809
[2026-03-01 19:25:15] 2026-03-02 00:24:37,558 | INFO     | chi2: 2.2480943493760637
[2026-03-01 19:25:15] 2026-03-02 00:24:37,558 | INFO     | current chi2=2.2480943493760637 (change=42.59620448235755 %)
[2026-03-01 19:25:15] 2026-03-02 00:24:37,558 | INFO     | sum of square deviations: 2093441110.1058128
[2026-03-01 19:25:15] 2026-03-02 00:24:37,582 | INFO     | sum of deviations: 55015327078.39684
[2026-03-01 19:25:15] 2026-03-02 00:24:37,583 | INFO     | mean x: 1772404707.216931
[2026-03-01 19:25:15] 2026-03-02 00:24:37,583 | INFO     | mean y: 2538348.0634920634
[2026-03-01 19:25:15] 2026-03-02 00:24:37,583 | INFO     | intersect: -46575998880.48126
[2026-03-01 19:25:15] 2026-03-02 00:24:37,583 | INFO     | chi2: 2.249362544481034
[2026-03-01 19:25:15] 2026-03-02 00:24:37,583 | INFO     | current chi2=2.249362544481034 (change=-0.056412005364562375 %)
[2026-03-01 19:25:15] 2026-03-02 00:24:37,583 | INFO     | right removable region: 188
[2026-03-01 19:25:15] 2026-03-02 00:24:37,584 | INFO     | sum of square deviations: 2263994579.407216
[2026-03-01 19:25:15] 2026-03-02 00:24:37,585 | INFO     | sum of deviations: -14156631793.067013
[2026-03-01 19:25:15] 2026-03-02 00:24:37,585 | INFO     | mean x: 1772405164.7164948
[2026-03-01 19:25:15] 2026-03-02 00:24:37,585 | INFO     | mean y: 2555230.4896907215
[2026-03-01 19:25:15] 2026-03-02 00:24:37,585 | INFO     | intersect: 11085305840.074358
[2026-03-01 19:25:15] 2026-03-02 00:24:37,599 | INFO     | chi2: 1.8198105754316694
[2026-03-01 19:25:15] 2026-03-02 00:24:37,617 | INFO     | current chi2=1.8198105754316694 (change=53.532184188837206 %)
[2026-03-01 19:25:15] 2026-03-02 00:24:37,617 | INFO     | sum of square deviations: 2093401826.6666658
[2026-03-01 19:25:15] 2026-03-02 00:24:37,618 | INFO     | sum of deviations: -21320442888.555553
[2026-03-01 19:25:15] 2026-03-02 00:24:37,618 | INFO     | mean x: 1772405317.2222223
[2026-03-01 19:25:15] 2026-03-02 00:24:37,618 | INFO     | mean y: 2561579.798941799
[2026-03-01 19:25:15] 2026-03-02 00:24:37,618 | INFO     | intersect: 18053786079.482952
[2026-03-01 19:25:15] 2026-03-02 00:24:37,619 | INFO     | chi2: 1.759149317516981
[2026-03-01 19:25:15] 2026-03-02 00:24:37,619 | INFO     | current chi2=1.759149317516981 (change=3.3333830857807363 %)
[2026-03-01 19:25:15] 2026-03-02 00:24:37,619 | INFO     | left removable region: 20
[2026-03-01 19:25:15] 2026-03-02 00:24:37,619 | INFO     | sum of square deviations: 1470245161.994046
[2026-03-01 19:25:15] 2026-03-02 00:24:37,637 | INFO     | sum of deviations: 4845124492.315475
[2026-03-01 19:25:15] 2026-03-02 00:24:37,637 | INFO     | mean x: 1772405286.7440476
[2026-03-01 19:25:15] 2026-03-02 00:24:37,638 | INFO     | mean y: 2585557.5654761903
[2026-03-01 19:25:15] 2026-03-02 00:24:37,638 | INFO     | intersect: -5838293560.489935
[2026-03-01 19:25:15] 2026-03-02 00:24:37,638 | INFO     | chi2: 0.0008899920674408293
[2026-03-01 19:25:15] 2026-03-02 00:24:37,638 | INFO     | current memory leak: 3.30 B/s (using 168 data points, chi2=0.00)
[2026-03-01 19:25:15] 2026-03-02 00:24:37,639 | INFO     | could have reported an average CPU frequency of 2619 MHz (10 samples)
[2026-03-01 19:25:15] 2026-03-02 00:24:37,639 | INFO     | ..............................
[2026-03-01 19:25:15] 2026-03-02 00:24:37,639 | INFO     | . Timing measurements:
[2026-03-01 19:25:15] 2026-03-02 00:24:37,639 | INFO     | . get job = 0 s
[2026-03-01 19:25:15] 2026-03-02 00:24:37,639 | INFO     | . initial setup = 30 s
[2026-03-01 19:25:15] 2026-03-02 00:24:37,639 | INFO     | . payload setup = 35 s
[2026-03-01 19:25:15] 2026-03-02 00:24:37,639 | INFO     | . stage-in = 0 s
[2026-03-01 19:25:15] 2026-03-02 00:24:37,639 | INFO     | . payload execution = 12117 s
[2026-03-01 19:25:15] 2026-03-02 00:24:37,639 | INFO     | . stage-out = 4 s
[2026-03-01 19:25:15] 2026-03-02 00:24:37,640 | INFO     | . log creation = 0 s
[2026-03-01 19:25:15] 2026-03-02 00:24:37,669 | INFO     | ..............................
[2026-03-01 19:25:15] 2026-03-02 00:24:38,718 | INFO     | 
[2026-03-01 19:25:15] 2026-03-02 00:24:38,718 | INFO     | job summary report
[2026-03-01 19:25:15] 2026-03-02 00:24:38,718 | INFO     | --------------------------------------------------
[2026-03-01 19:25:15] 2026-03-02 00:24:38,718 | INFO     | PanDA job id: 7034441755
[2026-03-01 19:25:15] 2026-03-02 00:24:38,718 | INFO     | task id: 48838521
[2026-03-01 19:25:15] 2026-03-02 00:24:38,718 | INFO     | errors: (none)
[2026-03-01 19:25:15] 2026-03-02 00:24:38,718 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-01 19:25:15] 2026-03-02 00:24:38,718 | INFO     | pilot state: finished 
[2026-03-01 19:25:15] 2026-03-02 00:24:38,718 | INFO     | transexitcode: 0
[2026-03-01 19:25:15] 2026-03-02 00:24:38,719 | INFO     | exeerrorcode: 0
[2026-03-01 19:25:15] 2026-03-02 00:24:38,719 | INFO     | exeerrordiag: 
[2026-03-01 19:25:15] 2026-03-02 00:24:38,719 | INFO     | exitcode: 0
[2026-03-01 19:25:15] 2026-03-02 00:24:38,719 | INFO     | exitmsg: OK
[2026-03-01 19:25:15] 2026-03-02 00:24:38,719 | INFO     | cpuconsumptiontime: 46274 s
[2026-03-01 19:25:15] 2026-03-02 00:24:38,719 | INFO     | nevents: 400
[2026-03-01 19:25:15] 2026-03-02 00:24:38,719 | INFO     | neventsw: 0
[2026-03-01 19:25:15] 2026-03-02 00:24:38,719 | INFO     | pid: 2647395
[2026-03-01 19:25:15] 2026-03-02 00:24:38,719 | INFO     | pgrp: 2647395
[2026-03-01 19:25:15] 2026-03-02 00:24:38,719 | INFO     | corecount: 9
[2026-03-01 19:25:15] 2026-03-02 00:24:38,719 | INFO     | event service: False
[2026-03-01 19:25:15] 2026-03-02 00:24:38,719 | INFO     | sizes: {0: 2281841, 1: 2281869, 2: 2282302, 13: 2282330, 12157: 2312093, 12158: 2312092, 12163: 2321274, 12166: 2321330, 12169: 2321524}
[2026-03-01 19:25:15] 2026-03-02 00:24:38,719 | INFO     | --------------------------------------------------
[2026-03-01 19:25:15] 2026-03-02 00:24:38,720 | INFO     | 
[2026-03-01 19:25:15] 2026-03-02 00:24:38,720 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-03-01 19:25:15] 2026-03-02 00:24:38,847 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-01 19:25:15] 2026-03-02 00:24:38,847 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-01 19:25:15] 2026-03-02 00:24:38,847 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-01 19:25:15] 2026-03-02 00:24:38,848 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-01 19:25:15] 2026-03-02 00:24:38,848 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-01 19:25:15] 2026-03-02 00:24:38,848 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-01 19:25:15] 2026-03-02 00:24:38,848 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-01 19:25:15] 2026-03-02 00:24:38,848 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-01 19:25:15] 2026-03-02 00:24:38,848 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-01 19:25:15] 2026-03-02 00:24:38,848 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-01 19:25:15] 2026-03-02 00:24:38,848 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-01 19:25:15] 2026-03-02 00:24:38,848 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-01 19:25:15] 2026-03-02 00:24:38,848 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-01 19:25:15] 2026-03-02 00:24:38,848 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-01 19:25:15] 2026-03-02 00:24:38,848 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-01 19:25:15] 2026-03-02 00:24:38,849 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-01 19:25:15] 2026-03-02 00:24:38,849 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-01 19:25:15] 2026-03-02 00:24:38,849 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-01 19:25:15] 2026-03-02 00:24:38,849 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-01 19:25:15] 2026-03-02 00:24:38,849 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-01 19:25:15] 2026-03-02 00:24:38,849 | INFO     | job 7034441755 has completed (purged errors)
[2026-03-01 19:25:15] 2026-03-02 00:24:38,849 | INFO     | overall cleanup function is called
[2026-03-01 19:25:15] 2026-03-02 00:24:39,196 | INFO     | PID=2639263 has CPU usage=11.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-03-01 19:25:15] 2026-03-02 00:24:39,196 | INFO     | .. there are 25 such processes running
[2026-03-01 19:25:15] 2026-03-02 00:24:39,902 | INFO     | --- collectZombieJob: --- 10, [2647395]
[2026-03-01 19:25:15] 2026-03-02 00:24:39,902 | INFO     | zombie collector waiting for pid 2647395
[2026-03-01 19:25:15] 2026-03-02 00:24:39,902 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-01 19:25:15] 2026-03-02 00:24:39,902 | INFO     | collected zombie processes
[2026-03-01 19:25:15] 2026-03-02 00:24:39,902 | INFO     | will attempt to kill all subprocesses of pid=2647395
[2026-03-01 19:25:15] 2026-03-02 00:24:42,980 | INFO     | process IDs to be killed: [2647395] (in reverse order)
[2026-03-01 19:25:15] 2026-03-02 00:24:43,210 | WARNING  | found no corresponding commands to process id(s)
[2026-03-01 19:25:15] 2026-03-02 00:24:43,211 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-01 19:25:15] 2026-03-02 00:24:43,295 | INFO     | did not find any defunct processes belonging to 2647395
[2026-03-01 19:25:15] 2026-03-02 00:24:43,327 | INFO     | did not find any defunct processes belonging to 2647395
[2026-03-01 19:25:15] 2026-03-02 00:24:43,327 | INFO     | ready for new job
[2026-03-01 19:25:15] 2026-03-02 00:24:43,328 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-01 19:25:15] 2026-03-02 00:24:43,334 | INFO     | **************************************
[2026-03-01 19:25:15] 2026-03-02 00:24:43,334 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-01 19:25:15] 2026-03-02 00:24:43,334 | INFO     | **************************************
[2026-03-01 19:25:15] 2026-03-02 00:24:43,334 | INFO     | 
[2026-03-01 19:25:15] 2026-03-02 00:24:43,344 | INFO     | architecture information:
[2026-03-01 19:25:15] 2026-03-02 00:24:43,349 | INFO     | executing command: cat /etc/os-release
[2026-03-01 19:25:15] 2026-03-02 00:24:43,426 | INFO     | cat /etc/os-release:
[2026-03-01 19:25:15] NAME="CentOS Linux"
[2026-03-01 19:25:15] VERSION="7 (Core)"
[2026-03-01 19:25:15] ID="centos"
[2026-03-01 19:25:15] ID_LIKE="rhel fedora"
[2026-03-01 19:25:15] VERSION_ID="7"
[2026-03-01 19:25:15] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-01 19:25:15] ANSI_COLOR="0;31"
[2026-03-01 19:25:15] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-01 19:25:15] HOME_URL="https://www.centos.org/"
[2026-03-01 19:25:15] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-01 19:25:15] 
[2026-03-01 19:25:15] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-01 19:25:15] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-01 19:25:15] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-01 19:25:15] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-01 19:25:15] 
[2026-03-01 19:25:15] 2026-03-02 00:24:43,426 | INFO     | **************************************
[2026-03-01 19:25:15] 2026-03-02 00:24:43,930 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-03-01 19:25:15] 2026-03-02 00:24:43,993 | INFO     | sufficient remaining disk space (126590386176 B)
[2026-03-01 19:25:15] 2026-03-02 00:24:43,993 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-01 19:25:15] 2026-03-02 00:24:43,994 | INFO     | current server update state: UPDATING_FINAL
[2026-03-01 19:25:15] 2026-03-02 00:24:43,994 | INFO     | update_server=False
[2026-03-01 19:25:15] 2026-03-02 00:24:43,994 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-01 19:25:15] 2026-03-02 00:24:43,995 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-01 19:25:15] 2026-03-02 00:24:43,995 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-01 19:25:15] 2026-03-02 00:24:44,143 | INFO     | all job control threads have been joined
[2026-03-01 19:25:15] 2026-03-02 00:24:44,397 | INFO     | all data control threads have been joined
[2026-03-01 19:25:15] 2026-03-02 00:24:44,448 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-01 19:25:15] 2026-03-02 00:24:44,448 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-01 19:25:15] 2026-03-02 00:24:44,448 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-01 19:25:15] 2026-03-02 00:24:44,448 | INFO     | will abort loop
[2026-03-01 19:25:15] 2026-03-02 00:24:44,501 | INFO     | all payload control threads have been joined
[2026-03-01 19:25:15] 2026-03-02 00:24:45,000 | INFO     | [job] retrieve thread has finished
[2026-03-01 19:25:15] 2026-03-02 00:24:45,005 | INFO     | [job] queue monitor thread has finished
[2026-03-01 19:25:15] 2026-03-02 00:24:45,149 | INFO     | [job] control thread has finished
[2026-03-01 19:25:15] 2026-03-02 00:24:45,295 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-01 19:25:15] 2026-03-02 00:24:45,299 | INFO     | [job] create_data_payload thread has finished
[2026-03-01 19:25:15] 2026-03-02 00:24:45,373 | INFO     | [payload] execute_payloads thread has finished
[2026-03-01 19:25:15] 2026-03-02 00:24:45,397 | INFO     | [data] copytool_in thread has finished
[2026-03-01 19:25:15] 2026-03-02 00:24:45,403 | INFO     | [data] control thread has finished
[2026-03-01 19:25:15] 2026-03-02 00:24:45,454 | INFO     | [job] job monitor thread has finished
[2026-03-01 19:25:15] 2026-03-02 00:24:45,507 | INFO     | [payload] control thread has finished
[2026-03-01 19:25:15] 2026-03-02 00:24:45,541 | INFO     | [payload] validate_post thread has finished
[2026-03-01 19:25:15] 2026-03-02 00:24:45,584 | INFO     | [payload] validate_pre thread has finished
[2026-03-01 19:25:15] 2026-03-02 00:24:46,002 | INFO     | [data] copytool_out thread has finished
[2026-03-01 19:25:15] 2026-03-02 00:24:46,353 | INFO     | [payload] failed_post thread has finished
[2026-03-01 19:25:15] 2026-03-02 00:24:46,450 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-01 19:25:15] 2026-03-02 00:24:46,462 | INFO     | [job] validate thread has finished
[2026-03-01 19:25:15] 2026-03-02 00:24:50,459 | INFO     | [data] queue_monitor thread has finished
[2026-03-01 19:25:15] 2026-03-02 00:24:56,440 | INFO     | [monitor] cgroup control has ended
[2026-03-01 19:25:15] 2026-03-02 00:24:57,663 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140016152991552)>', '<ExcThread(monitor, started 140015774451456)>']
[2026-03-01 19:25:15] 2026-03-02 00:25:02,696 | INFO     | all workflow threads have been joined
[2026-03-01 19:25:15] 2026-03-02 00:25:02,696 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-01 19:25:15] 2026-03-02 00:25:02,696 | INFO     | traces error code: 0
[2026-03-01 19:25:15] 2026-03-02 00:25:02,696 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-01 19:25:15] 2026-03-02 00:25:14,359 | INFO     | PID=2639263 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-01 19:25:15] 2026-03-02 00:25:14,360 | INFO     | .. there are 25 such processes running
[2026-03-01 19:25:15] 2026-03-02 00:25:14,373 | INFO     | found 0 job(s) in 20 queues
[2026-03-01 19:25:15] 2026-03-02 00:25:14,373 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-01 19:25:15] 2026-03-02 00:25:14,373 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-01 19:25:15] 2026-03-02 00:25:14,373 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-01 19:25:15] 2026-03-02 00:25:14,373 | INFO     | [monitor] control thread has ended
[2026-03-01 19:25:15] 2026-03-02 00:25:14,692 [wrapper] ==== pilot stdout END ====
[2026-03-01 19:25:15] 2026-03-02 00:25:14,711 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-01 19:25:15] 2026-03-02 00:25:14,731 [wrapper] pilotpid: 2639263
[2026-03-01 19:25:15] 2026-03-02 00:25:14,761 [wrapper] Pilot exit status: 0
[2026-03-01 19:25:15] 2026-03-02 00:25:14,874 [wrapper] pandaids: 7034441755
[2026-03-01 19:25:15] 2026-03-02 00:25:15,176 [wrapper] cleanup supervisor_pilot 3085693 2639264
[2026-03-01 19:25:15] 2026-03-02 00:25:15,199 [wrapper] Test setup, not cleaning
[2026-03-01 19:25:15] 2026-03-02 00:25:15,222 [wrapper] apfmon messages muted
[2026-03-01 19:25:15] 2026-03-02 00:25:15,233 [wrapper] ==== wrapper stdout END ====
[2026-03-01 19:25:15] 2026-03-02 00:25:15,252 [wrapper] ==== wrapper stderr END ====
[2026-03-01 19:25:15]  *** Error codes and diagnostics ***
[2026-03-01 19:25:15]     "exeErrorCode": 0,
[2026-03-01 19:25:15]     "exeErrorDiag": "",
[2026-03-01 19:25:15]     "pilotErrorCode": 0,
[2026-03-01 19:25:15]     "pilotErrorDiag": "",
[2026-03-01 19:25:15]  *** Listing of results directory ***
[2026-03-01 19:25:15] total 463356
[2026-03-01 19:25:15] -rw-r--r--. 1 boincer umatlas    584627 Mar  1 00:54 pilot3.tar.gz
[2026-03-01 19:25:15] -rwx------. 1 boincer umatlas     36322 Mar  1 00:57 runpilot2-wrapper.sh
[2026-03-01 19:25:15] -rw-r--r--. 1 boincer umatlas      5111 Mar  1 00:59 queuedata.json
[2026-03-01 19:25:15] -rw-r--r--. 1 boincer umatlas       100 Mar  1 16:00 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-01 19:25:15] -rwxr-xr-x. 1 boincer umatlas      7986 Mar  1 16:00 run_atlas
[2026-03-01 19:25:15] -rw-r--r--. 1 boincer umatlas       105 Mar  1 16:00 job.xml
[2026-03-01 19:25:15] -rw-r--r--. 2 boincer umatlas 271270475 Mar  1 16:00 EVNT.48343683._000057.pool.root.1
[2026-03-01 19:25:15] -rw-r--r--. 2 boincer umatlas     15845 Mar  1 16:00 start_atlas.sh
[2026-03-01 19:25:15] drwxrwx--x. 2 boincer umatlas      4096 Mar  1 16:00 shared
[2026-03-01 19:25:15] -rw-r--r--. 2 boincer umatlas    597968 Mar  1 16:00 input.tar.gz
[2026-03-01 19:25:15] -rw-r--r--. 1 boincer umatlas         0 Mar  1 16:00 boinc_lockfile
[2026-03-01 19:25:15] -rw-r--r--. 1 boincer umatlas      2563 Mar  1 16:00 pandaJob.out
[2026-03-01 19:25:15] -rw-------. 1 boincer umatlas        57 Mar  1 16:00 setup.sh.local
[2026-03-01 19:25:15] -rw-------. 1 boincer umatlas    998184 Mar  1 16:01 agis_schedconf.cvmfs.json
[2026-03-01 19:25:15] -rw-------. 1 boincer umatlas       444 Mar  1 16:01 workernode_map.json
[2026-03-01 19:25:15] drwx------. 5 boincer umatlas      4096 Mar  1 16:01 pilot3
[2026-03-01 19:25:15] -rw-r--r--. 1 boincer umatlas      6860 Mar  1 19:19 init_data.xml
[2026-03-01 19:25:15] -rw-------. 1 boincer umatlas 195215045 Mar  1 19:23 HITS.48838521._001416.pool.root.1
[2026-03-01 19:25:15] -rw-r--r--. 1 boincer umatlas       530 Mar  1 19:23 boinc_task_state.xml
[2026-03-01 19:25:15] -rw-------. 1 boincer umatlas      1044 Mar  1 19:24 memory_monitor_summary.json
[2026-03-01 19:25:15] -rw-------. 1 boincer umatlas   1513015 Mar  1 19:24 agis_ddmendpoints.agis.ALL.json
[2026-03-01 19:25:15] -rw-------. 1 boincer umatlas    453902 Mar  1 19:24 log.48838521._001416.job.log.tgz.1
[2026-03-01 19:25:15] -rw-------. 1 boincer umatlas      6397 Mar  1 19:24 heartbeat.json
[2026-03-01 19:25:15] -rw-r--r--. 1 boincer umatlas      8192 Mar  1 19:25 boinc_mmap_file
[2026-03-01 19:25:15] -rw-r--r--. 1 boincer umatlas        28 Mar  1 19:25 wrapper_checkpoint.txt
[2026-03-01 19:25:15] -rw-------. 1 boincer umatlas        95 Mar  1 19:25 pilot_heartbeat.json
[2026-03-01 19:25:15] -rw-------. 1 boincer umatlas       823 Mar  1 19:25 pilotlog.txt
[2026-03-01 19:25:15] -rw-------. 1 boincer umatlas   1577049 Mar  1 19:25 log.48838521._001416.job.log.1
[2026-03-01 19:25:15] -rw-------. 1 boincer umatlas       357 Mar  1 19:25 output.list
[2026-03-01 19:25:15] -rw-r--r--. 1 boincer umatlas       620 Mar  1 19:25 runtime_log
[2026-03-01 19:25:15] -rw-------. 1 boincer umatlas   2048000 Mar  1 19:25 result.tar.gz
[2026-03-01 19:25:15] -rw-r--r--. 1 boincer umatlas      9352 Mar  1 19:25 runtime_log.err
[2026-03-01 19:25:15] -rw-------. 1 boincer umatlas       656 Mar  1 19:25 AxbLDmMzoG9n9Rq4apOajLDm4fhM0noT9bVooX4SDmqL7KDmlYB5Ym.diag
[2026-03-01 19:25:15] -rw-r--r--. 1 boincer umatlas     21282 Mar  1 19:25 stderr.txt
[2026-03-01 19:25:15] HITS file was successfully produced:
[2026-03-01 19:25:15] -rw-------. 1 boincer umatlas 195215045 Mar  1 19:23 shared/HITS.pool.root.1
[2026-03-01 19:25:15]  *** Contents of shared directory: ***
[2026-03-01 19:25:15] total 458164
[2026-03-01 19:25:15] -rw-r--r--. 2 boincer umatlas 271270475 Mar  1 16:00 ATLAS.root_0
[2026-03-01 19:25:15] -rw-r--r--. 2 boincer umatlas     15845 Mar  1 16:00 start_atlas.sh
[2026-03-01 19:25:15] -rw-r--r--. 2 boincer umatlas    597968 Mar  1 16:00 input.tar.gz
[2026-03-01 19:25:15] -rw-------. 1 boincer umatlas 195215045 Mar  1 19:23 HITS.pool.root.1
[2026-03-01 19:25:15] -rw-------. 1 boincer umatlas   2048000 Mar  1 19:25 result.tar.gz
19:25:17 (2633202): run_atlas exited; CPU time 46770.300278
19:25:17 (2633202): called boinc_finish(0)

</stderr_txt>
]]>

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