Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
19:38:29 (272627): wrapper (7.7.26015): starting
19:38:29 (272627): wrapper: running run_atlas (--nthreads 12)
[2026-03-01 19:38:29] Arguments: --nthreads 12
[2026-03-01 19:38:29] Threads: 12
[2026-03-01 19:38:29] Checking for CVMFS
[2026-03-01 19:38:29] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-01 19:38:29] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-01 19:38:29] Running cvmfs_config stat atlas.cern.ch
[2026-03-01 19:38:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-01 19:38:29] 2.11.0.0 141266 1 46616 156781 2 186 5102024 6144001 4402 130560 0 282145 99.994 2778 533 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2026-03-01 19:38:29] CVMFS is ok
[2026-03-01 19:38:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-01 19:38:29] Checking for apptainer binary...
[2026-03-01 19:38:29] apptainer is not installed, using version from CVMFS
[2026-03-01 19:38:29] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-01 19:38:30] radiat0r
[2026-03-01 19:38:30] apptainer works
[2026-03-01 19:38:30] Set ATHENA_PROC_NUMBER=12
[2026-03-01 19:38:30] Set ATHENA_CORE_NUMBER=12
[2026-03-01 19:38:30] Starting ATLAS job with PandaID=7031258655
[2026-03-01 19:38:30] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/19 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-01 20:37:58]  *** The last 200 lines of the pilot log: ***
[2026-03-01 20:37:58]  direct_access_lan=False
[2026-03-01 20:37:58]  direct_access_wan=False
[2026-03-01 20:37:58]  domain=
[2026-03-01 20:37:58]  filesize=366529
[2026-03-01 20:37:58]  filetype=log
[2026-03-01 20:37:58]  guid=70db4ad5-96e0-4842-bfee-260c76cbcd3a
[2026-03-01 20:37:58]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-03-01 20:37:58]  is_altstaged=None
[2026-03-01 20:37:58]  is_tar=False
[2026-03-01 20:37:58]  lfn=log.48838536._000461.job.log.tgz.1
[2026-03-01 20:37:58]  mtime=0
[2026-03-01 20:37:58]  protocol_id=None
[2026-03-01 20:37:58]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-01 20:37:58]  replicas=None
[2026-03-01 20:37:58]  scope=mc23_13p6TeV
[2026-03-01 20:37:58]  status=None
[2026-03-01 20:37:58]  status_code=0
[2026-03-01 20:37:58]  storage_token=
[2026-03-01 20:37:58]  surl=/var/lib/boinc/slots/19/PanDA_Pilot-7031258655/log.48838536._000461.job.log.tgz.1
[2026-03-01 20:37:58]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/da/46/log.48838536._000461.job.log.tgz.1
[2026-03-01 20:37:58]  workdir=None
[2026-03-01 20:37:58] ]
[2026-03-01 20:37:58] 2026-03-01 20:37:17,456 | INFO     | transferring file log.48838536._000461.job.log.tgz.1 from /var/lib/boinc/slots/19/PanDA_Pilot-7031258655/log.48838536._000461.job.log.tgz.1 to /var/lib/boinc/slots
[2026-03-01 20:37:58] 2026-03-01 20:37:17,457 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/19/PanDA_Pilot-7031258655/log.48838536._000461.job.log.tgz.1 /var/lib/boinc/slots/19/log.48838536._000461.j
[2026-03-01 20:37:58] 2026-03-01 20:37:17,483 | INFO     | adding to output.list: log.48838536._000461.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/da/46/log.48838536._000461.job.log.tg
[2026-03-01 20:37:58] 2026-03-01 20:37:17,484 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-01 20:37:58] 2026-03-01 20:37:17,484 | INFO     | summary of transferred files:
[2026-03-01 20:37:58] 2026-03-01 20:37:17,484 | INFO     |  -- lfn=log.48838536._000461.job.log.tgz.1, status_code=0, status=transferred
[2026-03-01 20:37:58] 2026-03-01 20:37:17,485 | INFO     | stage-out finished correctly
[2026-03-01 20:37:58] 2026-03-01 20:37:17,588 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-01 20:37:58] 2026-03-01 20:37:17,684 | INFO     | job 7031258655 has state=finished
[2026-03-01 20:37:58] 2026-03-01 20:37:17,684 | INFO     | preparing for final server update for job 7031258655 in state='finished'
[2026-03-01 20:37:58] 2026-03-01 20:37:17,685 | INFO     | reading metadata from: /var/lib/boinc/slots/19/PanDA_Pilot-7031258655/jobReport.json
[2026-03-01 20:37:58] 2026-03-01 20:37:17,687 | INFO     | added worker_node to metadata from /var/lib/boinc/slots/19/workernode_map.json
[2026-03-01 20:37:58] 2026-03-01 20:37:17,687 | INFO     | this job has now completed (state=finished)
[2026-03-01 20:37:58] 2026-03-01 20:37:17,688 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-01 20:37:58] 2026-03-01 20:37:17,688 | INFO     | log transfer has been attempted: DONE
[2026-03-01 20:37:58] 2026-03-01 20:37:17,688 | INFO     | job 7031258655 has finished - writing final server update
[2026-03-01 20:37:58] 2026-03-01 20:37:17,688 | INFO     | total number of processed events: 400 (read)
[2026-03-01 20:37:58] 2026-03-01 20:37:17,757 | INFO     | using path: /var/lib/boinc/slots/19/PanDA_Pilot-7031258655/memory_monitor_summary.json (trf name=prmon)
[2026-03-01 20:37:58] 2026-03-01 20:37:17,758 | INFO     | extracted standard info from prmon json
[2026-03-01 20:37:58] 2026-03-01 20:37:17,758 | INFO     | extracted standard memory fields from prmon json
[2026-03-01 20:37:58] 2026-03-01 20:37:17,758 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-01 20:37:58] 2026-03-01 20:37:17,758 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-01 20:37:58] 2026-03-01 20:37:17,758 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-01 20:37:58] 2026-03-01 20:37:17,760 | INFO     | fitting pss+swap vs Time
[2026-03-01 20:37:58] 2026-03-01 20:37:17,760 | INFO     | sum of square deviations: 41117050.0
[2026-03-01 20:37:58] 2026-03-01 20:37:17,760 | INFO     | sum of deviations: 529977150.0000001
[2026-03-01 20:37:58] 2026-03-01 20:37:17,760 | INFO     | mean x: 1772395779.0
[2026-03-01 20:37:58] 2026-03-01 20:37:17,761 | INFO     | mean y: 2699600.7843137253
[2026-03-01 20:37:58] 2026-03-01 20:37:17,761 | INFO     | intersect: -22842549842.60839
[2026-03-01 20:37:58] 2026-03-01 20:37:17,761 | INFO     | chi2: 0.0012033372103021044
[2026-03-01 20:37:58] 2026-03-01 20:37:17,761 | INFO     | current memory leak: 12.89 B/s (using 51 data points, chi2=0.00)
[2026-03-01 20:37:58] 2026-03-01 20:37:17,761 | INFO     | could have reported an average CPU frequency of 1952 MHz (5 samples)
[2026-03-01 20:37:58] 2026-03-01 20:37:17,761 | INFO     | ..............................
[2026-03-01 20:37:58] 2026-03-01 20:37:17,761 | INFO     | . Timing measurements:
[2026-03-01 20:37:58] 2026-03-01 20:37:17,762 | INFO     | . get job = 0 s
[2026-03-01 20:37:58] 2026-03-01 20:37:17,762 | INFO     | . initial setup = 6 s
[2026-03-01 20:37:58] 2026-03-01 20:37:17,762 | INFO     | . payload setup = 6 s
[2026-03-01 20:37:58] 2026-03-01 20:37:17,762 | INFO     | . stage-in = 0 s
[2026-03-01 20:37:58] 2026-03-01 20:37:17,762 | INFO     | . payload execution = 3487 s
[2026-03-01 20:37:58] 2026-03-01 20:37:17,762 | INFO     | . stage-out = 0 s
[2026-03-01 20:37:58] 2026-03-01 20:37:17,762 | INFO     | . log creation = 0 s
[2026-03-01 20:37:58] 2026-03-01 20:37:17,762 | INFO     | ..............................
[2026-03-01 20:37:58] 2026-03-01 20:37:18,170 | INFO     | 
[2026-03-01 20:37:58] 2026-03-01 20:37:18,170 | INFO     | job summary report
[2026-03-01 20:37:58] 2026-03-01 20:37:18,170 | INFO     | --------------------------------------------------
[2026-03-01 20:37:58] 2026-03-01 20:37:18,170 | INFO     | PanDA job id: 7031258655
[2026-03-01 20:37:58] 2026-03-01 20:37:18,170 | INFO     | task id: 48838536
[2026-03-01 20:37:58] 2026-03-01 20:37:18,170 | INFO     | errors: (none)
[2026-03-01 20:37:58] 2026-03-01 20:37:18,171 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-01 20:37:58] 2026-03-01 20:37:18,171 | INFO     | pilot state: finished 
[2026-03-01 20:37:58] 2026-03-01 20:37:18,171 | INFO     | transexitcode: 0
[2026-03-01 20:37:58] 2026-03-01 20:37:18,171 | INFO     | exeerrorcode: 0
[2026-03-01 20:37:58] 2026-03-01 20:37:18,171 | INFO     | exeerrordiag: 
[2026-03-01 20:37:58] 2026-03-01 20:37:18,171 | INFO     | exitcode: 0
[2026-03-01 20:37:58] 2026-03-01 20:37:18,171 | INFO     | exitmsg: OK
[2026-03-01 20:37:58] 2026-03-01 20:37:18,171 | INFO     | cpuconsumptiontime: 38037 s
[2026-03-01 20:37:58] 2026-03-01 20:37:18,171 | INFO     | nevents: 400
[2026-03-01 20:37:58] 2026-03-01 20:37:18,171 | INFO     | neventsw: 0
[2026-03-01 20:37:58] 2026-03-01 20:37:18,171 | INFO     | pid: 335848
[2026-03-01 20:37:58] 2026-03-01 20:37:18,171 | INFO     | pgrp: 335848
[2026-03-01 20:37:58] 2026-03-01 20:37:18,172 | INFO     | corecount: 12
[2026-03-01 20:37:58] 2026-03-01 20:37:18,172 | INFO     | event service: False
[2026-03-01 20:37:58] 2026-03-01 20:37:18,172 | INFO     | sizes: {0: 2282282, 11: 2282282, 3497: 2308107, 3498: 2308106, 3500: 2317388}
[2026-03-01 20:37:58] 2026-03-01 20:37:18,172 | INFO     | --------------------------------------------------
[2026-03-01 20:37:58] 2026-03-01 20:37:18,172 | INFO     | 
[2026-03-01 20:37:58] 2026-03-01 20:37:18,172 | INFO     | executing command: ls -lF /var/lib/boinc/slots/19
[2026-03-01 20:37:58] 2026-03-01 20:37:18,201 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-01 20:37:58] 2026-03-01 20:37:18,202 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-01 20:37:58] 2026-03-01 20:37:18,202 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-01 20:37:58] 2026-03-01 20:37:18,202 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-01 20:37:58] 2026-03-01 20:37:18,202 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-01 20:37:58] 2026-03-01 20:37:18,202 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-01 20:37:58] 2026-03-01 20:37:18,202 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-01 20:37:58] 2026-03-01 20:37:18,202 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-01 20:37:58] 2026-03-01 20:37:18,202 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-01 20:37:58] 2026-03-01 20:37:18,202 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-01 20:37:58] 2026-03-01 20:37:18,203 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-01 20:37:58] 2026-03-01 20:37:18,203 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-01 20:37:58] 2026-03-01 20:37:18,203 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-01 20:37:58] 2026-03-01 20:37:18,203 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-01 20:37:58] 2026-03-01 20:37:18,203 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-01 20:37:58] 2026-03-01 20:37:18,203 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-01 20:37:58] 2026-03-01 20:37:18,203 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-01 20:37:58] 2026-03-01 20:37:18,203 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-01 20:37:58] 2026-03-01 20:37:18,203 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-01 20:37:58] 2026-03-01 20:37:18,203 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-01 20:37:58] 2026-03-01 20:37:18,204 | INFO     | job 7031258655 has completed (purged errors)
[2026-03-01 20:37:58] 2026-03-01 20:37:18,204 | INFO     | overall cleanup function is called
[2026-03-01 20:37:58] 2026-03-01 20:37:19,209 | INFO     | --- collectZombieJob: --- 10, [335848]
[2026-03-01 20:37:58] 2026-03-01 20:37:19,210 | INFO     | zombie collector waiting for pid 335848
[2026-03-01 20:37:58] 2026-03-01 20:37:19,210 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-01 20:37:58] 2026-03-01 20:37:19,210 | INFO     | collected zombie processes
[2026-03-01 20:37:58] 2026-03-01 20:37:19,210 | INFO     | will attempt to kill all subprocesses of pid=335848
[2026-03-01 20:37:58] 2026-03-01 20:37:20,013 | INFO     | process IDs to be killed: [335848] (in reverse order)
[2026-03-01 20:37:58] 2026-03-01 20:37:20,294 | WARNING  | found no corresponding commands to process id(s)
[2026-03-01 20:37:58] 2026-03-01 20:37:20,295 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-01 20:37:58] 2026-03-01 20:37:20,321 | INFO     | did not find any defunct processes belonging to 335848
[2026-03-01 20:37:58] 2026-03-01 20:37:20,346 | INFO     | did not find any defunct processes belonging to 335848
[2026-03-01 20:37:58] 2026-03-01 20:37:20,347 | INFO     | ready for new job
[2026-03-01 20:37:58] 2026-03-01 20:37:20,347 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-01 20:37:58] 2026-03-01 20:37:20,349 | INFO     | **************************************
[2026-03-01 20:37:58] 2026-03-01 20:37:20,349 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-01 20:37:58] 2026-03-01 20:37:20,349 | INFO     | **************************************
[2026-03-01 20:37:58] 2026-03-01 20:37:20,349 | INFO     | 
[2026-03-01 20:37:58] 2026-03-01 20:37:20,388 | INFO     | architecture information:
[2026-03-01 20:37:58] 2026-03-01 20:37:20,389 | INFO     | executing command: cat /etc/os-release
[2026-03-01 20:37:58] 2026-03-01 20:37:20,413 | INFO     | cat /etc/os-release:
[2026-03-01 20:37:58] NAME="CentOS Linux"
[2026-03-01 20:37:58] VERSION="7 (Core)"
[2026-03-01 20:37:58] ID="centos"
[2026-03-01 20:37:58] ID_LIKE="rhel fedora"
[2026-03-01 20:37:58] VERSION_ID="7"
[2026-03-01 20:37:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-01 20:37:58] ANSI_COLOR="0;31"
[2026-03-01 20:37:58] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-01 20:37:58] HOME_URL="https://www.centos.org/"
[2026-03-01 20:37:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-01 20:37:58] 
[2026-03-01 20:37:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-01 20:37:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-01 20:37:58] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-01 20:37:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-01 20:37:58] 
[2026-03-01 20:37:58] 2026-03-01 20:37:20,413 | INFO     | **************************************
[2026-03-01 20:37:58] 2026-03-01 20:37:20,917 | INFO     | executing command: df -mP /var/lib/boinc/slots/19
[2026-03-01 20:37:58] 2026-03-01 20:37:20,944 | INFO     | sufficient remaining disk space (1718820536320 B)
[2026-03-01 20:37:58] 2026-03-01 20:37:20,945 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-01 20:37:58] 2026-03-01 20:37:20,945 | INFO     | current server update state: UPDATING_FINAL
[2026-03-01 20:37:58] 2026-03-01 20:37:20,945 | INFO     | update_server=False
[2026-03-01 20:37:58] 2026-03-01 20:37:20,945 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-01 20:37:58] 2026-03-01 20:37:20,945 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-01 20:37:58] 2026-03-01 20:37:20,960 | INFO     | all job control threads have been joined
[2026-03-01 20:37:58] 2026-03-01 20:37:21,554 | INFO     | all data control threads have been joined
[2026-03-01 20:37:58] 2026-03-01 20:37:21,565 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-01 20:37:58] 2026-03-01 20:37:21,565 | INFO     | aborting loop
[2026-03-01 20:37:58] 2026-03-01 20:37:21,951 | INFO     | [job] retrieve thread has finished
[2026-03-01 20:37:58] 2026-03-01 20:37:21,965 | INFO     | [job] control thread has finished
[2026-03-01 20:37:58] 2026-03-01 20:37:21,966 | INFO     | all payload control threads have been joined
[2026-03-01 20:37:58] 2026-03-01 20:37:22,091 | INFO     | [payload] execute_payloads thread has finished
[2026-03-01 20:37:58] 2026-03-01 20:37:22,454 | INFO     | [job] validate thread has finished
[2026-03-01 20:37:58] 2026-03-01 20:37:22,560 | INFO     | [data] control thread has finished
[2026-03-01 20:37:58] 2026-03-01 20:37:22,571 | INFO     | [job] job monitor thread has finished
[2026-03-01 20:37:58] 2026-03-01 20:37:22,591 | INFO     | [payload] validate_post thread has finished
[2026-03-01 20:37:58] 2026-03-01 20:37:22,610 | INFO     | [job] create_data_payload thread has finished
[2026-03-01 20:37:58] 2026-03-01 20:37:22,810 | INFO     | [payload] validate_pre thread has finished
[2026-03-01 20:37:58] 2026-03-01 20:37:22,866 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-01 20:37:58] 2026-03-01 20:37:22,951 | INFO     | [data] copytool_out thread has finished
[2026-03-01 20:37:58] 2026-03-01 20:37:22,970 | INFO     | [payload] control thread has finished
[2026-03-01 20:37:58] 2026-03-01 20:37:23,146 | INFO     | [payload] failed_post thread has finished
[2026-03-01 20:37:58] 2026-03-01 20:37:23,169 | INFO     | [data] copytool_in thread has finished
[2026-03-01 20:37:58] 2026-03-01 20:37:23,689 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-01 20:37:58] 2026-03-01 20:37:23,871 | INFO     | [job] queue monitor thread has finished
[2026-03-01 20:37:58] 2026-03-01 20:37:27,695 | INFO     | [data] queue_monitor thread has finished
[2026-03-01 20:37:58] 2026-03-01 20:37:31,033 | INFO     | job.realtimelogging is not enabled
[2026-03-01 20:37:58] 2026-03-01 20:37:32,039 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-01 20:37:58] 2026-03-01 20:37:50,758 | INFO     | [monitor] cgroup control has ended
[2026-03-01 20:37:58] 2026-03-01 20:37:51,229 | INFO     | PID=291245 has CPU usage=11.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-01 20:37:58] 2026-03-01 20:37:51,229 | INFO     | .. there are 17 such processes running
[2026-03-01 20:37:58] 2026-03-01 20:37:51,230 | INFO     | found 0 job(s) in 20 queues
[2026-03-01 20:37:58] 2026-03-01 20:37:51,230 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-01 20:37:58] 2026-03-01 20:37:51,230 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-01 20:37:58] 2026-03-01 20:37:52,783 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140262518990656)>', '<ExcThread(monitor, started 140261795546880)>']
[2026-03-01 20:37:58] 2026-03-01 20:37:53,240 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-01 20:37:58] 2026-03-01 20:37:53,240 | INFO     | [monitor] control thread has ended
[2026-03-01 20:37:58] 2026-03-01 20:37:57,798 | INFO     | all workflow threads have been joined
[2026-03-01 20:37:58] 2026-03-01 20:37:57,799 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-01 20:37:58] 2026-03-01 20:37:57,799 | INFO     | traces error code: 0
[2026-03-01 20:37:58] 2026-03-01 20:37:57,799 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-01 20:37:58] 2026-03-01 20:37:57,959 [wrapper] ==== pilot stdout END ====
[2026-03-01 20:37:58] 2026-03-01 20:37:57,963 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-01 20:37:58] 2026-03-01 20:37:57,966 [wrapper] pilotpid: 291245
[2026-03-01 20:37:58] 2026-03-01 20:37:57,970 [wrapper] Pilot exit status: 0
[2026-03-01 20:37:58] 2026-03-01 20:37:57,985 [wrapper] pandaids: 7031258655
[2026-03-01 20:37:58] 2026-03-01 20:37:58,177 [wrapper] cleanup supervisor_pilot  522253 291247
[2026-03-01 20:37:58] 2026-03-01 20:37:58,180 [wrapper] Test setup, not cleaning
[2026-03-01 20:37:58] 2026-03-01 20:37:58,184 [wrapper] apfmon messages muted
[2026-03-01 20:37:58] 2026-03-01 20:37:58,187 [wrapper] ==== wrapper stdout END ====
[2026-03-01 20:37:58] 2026-03-01 20:37:58,190 [wrapper] ==== wrapper stderr END ====
[2026-03-01 20:37:58]  *** Error codes and diagnostics ***
[2026-03-01 20:37:58]     "exeErrorCode": 0,
[2026-03-01 20:37:58]     "exeErrorDiag": "",
[2026-03-01 20:37:58]     "pilotErrorCode": 0,
[2026-03-01 20:37:58]     "pilotErrorDiag": "",
[2026-03-01 20:37:58]  *** Listing of results directory ***
[2026-03-01 20:37:58] total 463536
[2026-03-01 20:37:58] -rw-r--r-- 1 boinc boinc    584627 Feb 27 05:46 pilot3.tar.gz
[2026-03-01 20:37:58] -rwx------ 1 boinc boinc     36322 Feb 27 05:46 runpilot2-wrapper.sh
[2026-03-01 20:37:58] -rw-r--r-- 1 boinc boinc      5111 Feb 27 05:47 queuedata.json
[2026-03-01 20:37:58] -rw-r--r-- 1 boinc boinc       100 Mar  1 19:38 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-01 20:37:58] -rwxr-xr-x 1 boinc boinc      7986 Mar  1 19:38 run_atlas
[2026-03-01 20:37:58] -rw-r--r-- 1 boinc boinc       105 Mar  1 19:38 job.xml
[2026-03-01 20:37:58] -rw-r--r-- 2 boinc boinc     15845 Mar  1 19:38 start_atlas.sh
[2026-03-01 20:37:58] drwxrwx--x 2 boinc boinc      4096 Mar  1 19:38 shared
[2026-03-01 20:37:58] -rw-r--r-- 2 boinc boinc    597951 Mar  1 19:38 input.tar.gz
[2026-03-01 20:37:58] -rw-r--r-- 1 boinc boinc      9415 Mar  1 19:38 init_data.xml
[2026-03-01 20:37:58] -rw-r--r-- 2 boinc boinc 268791038 Mar  1 19:38 EVNT.48343704._000019.pool.root.1
[2026-03-01 20:37:58] -rw-r--r-- 1 boinc boinc         0 Mar  1 19:38 boinc_setup_complete
[2026-03-01 20:37:58] -rw-r--r-- 1 boinc boinc         0 Mar  1 19:38 boinc_lockfile
[2026-03-01 20:37:58] -rw-r--r-- 1 boinc boinc      2572 Mar  1 19:38 pandaJob.out
[2026-03-01 20:37:58] -rw------- 1 boinc boinc    998184 Mar  1 19:38 agis_schedconf.cvmfs.json
[2026-03-01 20:37:58] -rw------- 1 boinc boinc   1513015 Mar  1 19:38 agis_ddmendpoints.agis.ALL.json
[2026-03-01 20:37:58] -rw------- 1 boinc boinc       421 Mar  1 19:38 workernode_map.json
[2026-03-01 20:37:58] drwx------ 5 boinc boinc      4096 Mar  1 19:38 pilot3
[2026-03-01 20:37:58] -rw------- 1 boinc boinc 200178851 Mar  1 20:36 HITS.48838536._000461.pool.root.1
[2026-03-01 20:37:58] -rw-r--r-- 1 boinc boinc       529 Mar  1 20:36 boinc_task_state.xml
[2026-03-01 20:37:58] -rw------- 1 boinc boinc      1029 Mar  1 20:37 memory_monitor_summary.json
[2026-03-01 20:37:58] -rw------- 1 boinc boinc    366529 Mar  1 20:37 log.48838536._000461.job.log.tgz.1
[2026-03-01 20:37:58] -rw------- 1 boinc boinc      6281 Mar  1 20:37 heartbeat.json
[2026-03-01 20:37:58] -rw------- 1 boinc boinc        95 Mar  1 20:37 pilot_heartbeat.json
[2026-03-01 20:37:58] -rw-r--r-- 1 boinc boinc      8192 Mar  1 20:37 boinc_mmap_file
[2026-03-01 20:37:58] -rw-r--r-- 1 boinc boinc        27 Mar  1 20:37 wrapper_checkpoint.txt
[2026-03-01 20:37:58] -rw------- 1 boinc boinc      4895 Mar  1 20:37 pilotlog.txt
[2026-03-01 20:37:58] -rw------- 1 boinc boinc    513440 Mar  1 20:37 log.48838536._000461.job.log.1
[2026-03-01 20:37:58] -rw------- 1 boinc boinc       357 Mar  1 20:37 output.list
[2026-03-01 20:37:58] -rw-r--r-- 1 boinc boinc       620 Mar  1 20:37 runtime_log
[2026-03-01 20:37:58] -rw------- 1 boinc boinc    901120 Mar  1 20:37 result.tar.gz
[2026-03-01 20:37:58] -rw-r--r-- 1 boinc boinc      8787 Mar  1 20:37 runtime_log.err
[2026-03-01 20:37:58] -rw------- 1 boinc boinc       643 Mar  1 20:37 8OnLDmZr5F9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmnS4KDm0vAuSn.diag
[2026-03-01 20:37:58] -rw-r--r-- 1 boinc boinc     20417 Mar  1 20:37 stderr.txt
[2026-03-01 20:37:58] HITS file was successfully produced:
[2026-03-01 20:37:58] -rw------- 1 boinc boinc 200178851 Mar  1 20:36 shared/HITS.pool.root.1
[2026-03-01 20:37:58]  *** Contents of shared directory: ***
[2026-03-01 20:37:58] total 459468
[2026-03-01 20:37:58] -rw-r--r-- 2 boinc boinc     15845 Mar  1 19:38 start_atlas.sh
[2026-03-01 20:37:58] -rw-r--r-- 2 boinc boinc    597951 Mar  1 19:38 input.tar.gz
[2026-03-01 20:37:58] -rw-r--r-- 2 boinc boinc 268791038 Mar  1 19:38 ATLAS.root_0
[2026-03-01 20:37:58] -rw------- 1 boinc boinc 200178851 Mar  1 20:36 HITS.pool.root.1
[2026-03-01 20:37:58] -rw------- 1 boinc boinc    901120 Mar  1 20:37 result.tar.gz
20:37:59 (272627): run_atlas exited; CPU time 38245.487190
20:37:59 (272627): called boinc_finish(0)

</stderr_txt>
]]>

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