Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
2026-03-03 04:12:11 (15376): vboxwrapper version 26210
2026-03-03 04:12:11 (15376): BOINC client version: 8.2.8
2026-03-03 04:12:12 (15376): Detected: VirtualBox VboxManage Interface (Version: 7.2.6)
2026-03-03 04:12:12 (15376): Successfully copied 'init_data.xml' to the shared directory.
2026-03-03 04:12:12 (15376): Create VM. (boinc_920ff7aba9b33a79, slot#0)
2026-03-03 04:12:13 (15376): Setting Memory Size for VM. (4400MB)
2026-03-03 04:12:13 (15376): Setting CPU Count for VM. (4)
2026-03-03 04:12:13 (15376): Setting Chipset Options for VM.
2026-03-03 04:12:14 (15376): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-03-03 04:12:14 (15376): Setting Boot Options for VM.
2026-03-03 04:12:15 (15376): Setting Network Configuration for NAT. (Driver: virtio)
2026-03-03 04:12:15 (15376): Enabling VM Network Access.
2026-03-03 04:12:15 (15376): Disabling USB Support for VM.
2026-03-03 04:12:15 (15376): Disabling COM Port Support for VM.
2026-03-03 04:12:16 (15376): Disabling LPT Port Support for VM.
2026-03-03 04:12:16 (15376): Disabling Audio Support for VM.
2026-03-03 04:12:16 (15376): Disabling Clipboard Support for VM.
2026-03-03 04:12:16 (15376): Disabling Drag and Drop Support for VM.
2026-03-03 04:12:17 (15376): Adding storage controller(s) to VM.
2026-03-03 04:12:17 (15376): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-03-03 04:12:17 (15376): Adding VirtualBox Guest Additions to VM.
2026-03-03 04:12:18 (15376): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-03-03 04:12:18 (15376): forwarding host port 12005 to guest port 80
2026-03-03 04:12:18 (15376): Enabling remote desktop for VM.
2026-03-03 04:12:19 (15376): Required extension pack not installed, remote desktop not enabled.
2026-03-03 04:12:19 (15376): Enabling shared directory for VM.
2026-03-03 04:12:19 (15376): Starting VM using VBoxManage interface. (boinc_920ff7aba9b33a79, slot#0)
2026-03-03 04:12:27 (15376): Successfully started VM. (PID = '11924')
2026-03-03 04:12:27 (15376): Reporting VM Process ID to BOINC.
2026-03-03 04:12:27 (15376): Guest Log: BIOS: VirtualBox 7.2.6
2026-03-03 04:12:27 (15376): Guest Log: CPUID EDX: 0x178bfbff
2026-03-03 04:12:27 (15376): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-03-03 04:12:27 (15376): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-03-03 04:12:27 (15376): VM state change detected. (old = 'poweredoff', new = 'running')
2026-03-03 04:12:27 (15376): Detected: Web Application Enabled (http://localhost:12005)
2026-03-03 04:12:27 (15376): Preference change detected
2026-03-03 04:12:27 (15376): Setting CPU throttle for VM. (100%)
2026-03-03 04:12:27 (15376): Setting checkpoint interval to 999 seconds. (Higher value of (Preference: 999 seconds) or (Vbox_job.xml: 900 seconds))
2026-03-03 04:12:29 (15376): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-03-03 04:12:29 (15376): Guest Log: BIOS: Booting from Hard Disk...
2026-03-03 04:12:32 (15376): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-03-03 04:12:32 (15376): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-03-03 04:12:32 (15376): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-03-03 04:12:32 (15376): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-03-03 04:12:32 (15376): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-03-03 04:12:32 (15376): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-03-03 04:12:32 (15376): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-03-03 04:12:32 (15376): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-03-03 04:12:32 (15376): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-03-03 04:12:32 (15376): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-03-03 04:12:32 (15376): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-03-03 04:12:32 (15376): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-03-03 04:12:32 (15376): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-03-03 04:12:32 (15376): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-03-03 04:12:32 (15376): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-03-03 04:12:32 (15376): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-03-03 04:12:32 (15376): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-03-03 04:12:32 (15376): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-03-03 04:12:32 (15376): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-03-03 04:12:32 (15376): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-03-03 04:12:32 (15376): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-03-03 04:12:32 (15376): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-03-03 04:12:32 (15376): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-03-03 04:12:32 (15376): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-03-03 04:12:32 (15376): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-03-03 04:12:32 (15376): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-03-03 04:12:32 (15376): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-03-03 04:12:32 (15376): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-03-03 04:12:32 (15376): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-03-03 04:12:32 (15376): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-03-03 04:12:32 (15376): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-03-03 04:12:32 (15376): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-03-03 04:12:40 (15376): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-03-03 04:12:40 (15376): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-03-03 04:12:51 (15376): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-03-03 04:12:51 (15376): Guest Log: 00:00:00.000277 main     Log opened 2026-03-03T04:12:49.090219000Z
2026-03-03 04:12:51 (15376): Guest Log: 00:00:00.000482 main     OS Product: Linux
2026-03-03 04:12:51 (15376): Guest Log: 00:00:00.000576 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-03-03 04:12:51 (15376): Guest Log: 00:00:00.000643 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-03-03 04:12:51 (15376): Guest Log: 00:00:00.000714 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-03-03 04:12:51 (15376): Guest Log: 00:00:00.000716 main     Process ID: 1309
2026-03-03 04:12:51 (15376): Guest Log: 00:00:00.000717 main     Package type: LINUX_64BITS_GENERIC
2026-03-03 04:12:51 (15376): Guest Log: 00:00:00.003086 main     5.2.32 r132073 started. Verbose level = 0
2026-03-03 04:12:51 (15376): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-03-03 04:12:51 (15376): Guest Log: [INFO] Mounting shared directory
2026-03-03 04:12:51 (15376): Guest Log: [INFO] Checking for init_data.xml
2026-03-03 04:13:01 (15376): Guest Log: 00:00:10.036486 timesync vgsvcTimeSyncWorker: Radical guest time change: -3 587 931 471 000ns (GuestNow=1 772 507 581 163 953 000 ns GuestLast=1 772 511 169 095 424 000 ns fSetTimeLastLoop=true )
2026-03-03 04:13:46 (15376): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-03-03 04:13:46 (15376): Guest Log: [INFO] Detected branch: prod
2026-03-03 04:13:47 (15376): Guest Log: This is the prod version of the ATLAS job wrapper
2026-03-03 04:13:47 (15376): Guest Log: Copying input files
2026-03-03 04:13:49 (15376): Guest Log: Copied input files into RunAtlas.
2026-03-03 04:13:50 (15376): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-03-03 04:13:50 (15376): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-03-03 04:13:50 (15376): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-03-03 04:13:50 (15376): Guest Log: Further information can be found at the LHC@home message board.
2026-03-03 04:13:58 (15376): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-03-03 04:13:59 (15376): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-03-03 04:13:59 (15376): Guest Log: 2.6.3.0 1608 0 32188 156830 4 1 3117743 4096001 0 65024 0 0 n/a 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2026-03-03 04:14:00 (15376): Guest Log: copied the webapp to /var/www
2026-03-03 04:14:00 (15376): Guest Log: ATHENA_PROC_NUMBER=4
2026-03-03 04:14:00 (15376): Guest Log: ATHENA_CORE_NUMBER=4
2026-03-03 04:14:01 (15376): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-03-03 04:14:01 (15376): Guest Log:  *** Starting ATLAS job. (PandaID=7035268617 taskID=48844445) ***
2026-03-03 05:57:50 (15376): Status Report: Elapsed Time: '6000.735928'
2026-03-03 05:57:50 (15376): Status Report: CPU Time: '21821.953125'
2026-03-03 07:39:13 (15376): Status Report: Elapsed Time: '12000.850904'
2026-03-03 07:39:13 (15376): Status Report: CPU Time: '45448.359375'
2026-03-03 09:20:27 (15376): Status Report: Elapsed Time: '18001.011770'
2026-03-03 09:20:27 (15376): Status Report: CPU Time: '69207.296875'
2026-03-03 11:01:45 (15376): Status Report: Elapsed Time: '24001.011770'
2026-03-03 11:01:45 (15376): Status Report: CPU Time: '92984.484375'
2026-03-03 12:43:09 (15376): Status Report: Elapsed Time: '30001.535843'
2026-03-03 12:43:09 (15376): Status Report: CPU Time: '116715.843750'
2026-03-03 13:58:11 (15376): Guest Log:  *** Job finished ***
2026-03-03 13:58:11 (15376): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-03-03 13:58:11 (15376): Guest Log: 2026-03-03 12:57:51,464 | INFO     | end of generic workflow (traces error code: 0)
2026-03-03 13:58:11 (15376): Guest Log: 2026-03-03 12:57:51,464 | INFO     | traces error code: 0
2026-03-03 13:58:11 (15376): Guest Log: 2026-03-03 12:57:51,465 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-03-03 13:58:11 (15376): Guest Log: 2026-03-03 12:58:09,814 | INFO     | PID=6002 has CPU usage=7.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE -z -t
2026-03-03 13:58:11 (15376): Guest Log: 2026-03-03 12:58:09,816 | INFO     | found 0 job(s) in 20 queues
2026-03-03 13:58:11 (15376): Guest Log: 2026-03-03 12:58:09,816 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-03-03 13:58:11 (15376): Guest Log: 2026-03-03 12:58:09,816 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-03-03 13:58:11 (15376): Guest Log: 2026-03-03 12:58:09,817 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-03-03 13:58:11 (15376): Guest Log: 2026-03-03 12:58:09,817 | CRITICAL | thread 'MainThread' is not alive
2026-03-03 13:58:11 (15376): Guest Log: 2026-03-03 12:58:09,817 | INFO     | [monitor] control thread has ended
2026-03-03 13:58:11 (15376): Guest Log: 2026-03-03 12:58:09,982 [wrapper] ==== pilot stdout END ====
2026-03-03 13:58:11 (15376): Guest Log: 2026-03-03 12:58:09,991 [wrapper] ==== wrapper stdout RESUME ====
2026-03-03 13:58:11 (15376): Guest Log: 2026-03-03 12:58:10,002 [wrapper] pilotpid: 6002
2026-03-03 13:58:11 (15376): Guest Log: 2026-03-03 12:58:10,012 [wrapper] Pilot exit status: 0
2026-03-03 13:58:11 (15376): Guest Log: 2026-03-03 12:58:10,152 [wrapper] pandaids: 7035268617
2026-03-03 13:58:11 (15376): Guest Log: 2026-03-03 12:58:10,221 [wrapper] cleanup supervisor_pilot  2244 6003
2026-03-03 13:58:11 (15376): Guest Log: 2026-03-03 12:58:10,233 [wrapper] Test setup, not cleaning
2026-03-03 13:58:11 (15376): Guest Log: 2026-03-03 12:58:10,242 [wrapper] apfmon messages muted
2026-03-03 13:58:11 (15376): Guest Log: 2026-03-03 12:58:10,252 [wrapper] ==== wrapper stdout END ====
2026-03-03 13:58:11 (15376): Guest Log: 2026-03-03 12:58:10,267 [wrapper] ==== wrapper stderr END ====
2026-03-03 13:58:11 (15376): Guest Log:  *** Error codes and diagnostics ***
2026-03-03 13:58:11 (15376): Guest Log:     "exeErrorCode": 0,
2026-03-03 13:58:11 (15376): Guest Log:     "exeErrorDiag": "",
2026-03-03 13:58:11 (15376): Guest Log:     "pilotErrorCode": 0,
2026-03-03 13:58:11 (15376): Guest Log:     "pilotErrorDiag": "",
2026-03-03 13:58:11 (15376): Guest Log:  *** Listing of results directory ***
2026-03-03 13:58:11 (15376): Guest Log: total 160868
2026-03-03 13:58:11 (15376): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Mar  1 16:16 queuedata.json
2026-03-03 13:58:11 (15376): Guest Log: -rwx------. 1 atlas atlas     36322 Mar  1 16:16 runpilot2-wrapper.sh
2026-03-03 13:58:11 (15376): Guest Log: -rw-r--r--. 1 atlas atlas    584627 Mar  1 16:16 pilot3.tar.gz
2026-03-03 13:58:11 (15376): Guest Log: -rwxr-xr-x. 1 atlas atlas      8683 Mar  3 03:13 init_data.xml
2026-03-03 13:58:11 (15376): Guest Log: -rwxr-xr-x. 1 atlas atlas    597983 Mar  3 03:13 input.tar.gz
2026-03-03 13:58:11 (15376): Guest Log: -rwxr-xr-x. 1 atlas atlas     15845 Mar  3 03:13 start_atlas.sh
2026-03-03 13:58:11 (15376): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Mar  3 03:13 EVNT.48453311._000001.pool.root.1 -> /data/./ATLAS.root_0
2026-03-03 13:58:11 (15376): Guest Log: -rw-r--r--. 1 atlas atlas      2649 Mar  3 03:14 pandaJob.out
2026-03-03 13:58:11 (15376): Guest Log: -rw-------. 1 atlas atlas    997730 Mar  3 03:14 agis_schedconf.cvmfs.json
2026-03-03 13:58:11 (15376): Guest Log: -rw-------. 1 atlas atlas       425 Mar  3 03:15 workernode_map.json
2026-03-03 13:58:11 (15376): Guest Log: drwx------. 5 atlas atlas      4096 Mar  3 03:15 pilot3
2026-03-03 13:58:11 (15376): Guest Log: -rw-------. 1 atlas atlas 149908051 Mar  3 12:56 HITS.48844445._000025.pool.root.1
2026-03-03 13:58:11 (15376): Guest Log: -rw-------. 1 atlas atlas         0 Mar  3 12:57 memory_monitor_summary.json
2026-03-03 13:58:11 (15376): Guest Log: -rw-------. 1 atlas atlas   1516104 Mar  3 12:57 agis_ddmendpoints.agis.ALL.json
2026-03-03 13:58:11 (15376): Guest Log: -rw-------. 1 atlas atlas    697652 Mar  3 12:57 log.48844445._000025.job.log.tgz.1
2026-03-03 13:58:11 (15376): Guest Log: -rw-------. 1 atlas atlas      6361 Mar  3 12:57 heartbeat.json
2026-03-03 13:58:11 (15376): Guest Log: -rw-------. 1 atlas atlas        95 Mar  3 12:58 pilot_heartbeat.json
2026-03-03 13:58:11 (15376): Guest Log: -rw-------. 1 atlas atlas       814 Mar  3 12:58 pilotlog.txt
2026-03-03 13:58:11 (15376): Guest Log: -rw-------. 1 atlas atlas   4787505 Mar  3 12:58 log.48844445._000025.job.log.1
2026-03-03 13:58:11 (15376): Guest Log: -rw-------. 1 atlas atlas       357 Mar  3 12:58 output.list
2026-03-03 13:58:11 (15376): Guest Log: -rw-r--r--. 1 atlas atlas       620 Mar  3 12:58 runtime_log
2026-03-03 13:58:11 (15376): Guest Log: -rw-------. 1 atlas atlas   5498880 Mar  3 12:58 result.tar.gz
2026-03-03 13:58:11 (15376): Guest Log: -rw-r--r--. 1 atlas atlas      8758 Mar  3 12:58 runtime_log.err
2026-03-03 13:58:11 (15376): Guest Log: -rw-------. 1 atlas atlas       661 Mar  3 12:58 J8NLDmwdyG9n9Rq4apOajLDm4fhM0noT9bVooX4SDmm68KDm7IxUEm.diag
2026-03-03 13:58:11 (15376): Guest Log: Looking for outputfile HITS.48844445._000025.pool.root.1
2026-03-03 13:58:11 (15376): Guest Log: HITS file was successfully produced
2026-03-03 13:58:11 (15376): Guest Log: -rw-------. 1 atlas atlas 149908051 Mar  3 12:56 /home/atlas/RunAtlas/HITS.48844445._000025.pool.root.1
2026-03-03 13:58:12 (15376): Guest Log: Successfully finished the ATLAS job!
2026-03-03 13:58:12 (15376): Guest Log: Copying the results back to the shared directory!
2026-03-03 13:58:13 (15376): Guest Log:  *** Contents of shared directory: ***
2026-03-03 13:58:13 (15376): Guest Log: total 356688
2026-03-03 13:58:13 (15376): Guest Log: -rwxrwxrwx. 1 root root 209208241 Mar  3 03:12 ATLAS.root_0
2026-03-03 13:58:13 (15376): Guest Log: -rwxrwxrwx. 1 root root 149908051 Mar  3 12:58 HITS.pool.root.1
2026-03-03 13:58:13 (15376): Guest Log: -rwxrwxrwx. 1 root root      8683 Mar  3 03:12 init_data.xml
2026-03-03 13:58:13 (15376): Guest Log: -rwxrwxrwx. 1 root root    597983 Mar  1 19:23 input.tar.gz
2026-03-03 13:58:13 (15376): Guest Log: -rwxrwxrwx. 1 root root   5498880 Mar  3 12:58 result.tar.gz
2026-03-03 13:58:13 (15376): Guest Log: -rwxrwxrwx. 1 root root     15845 Mar  1 19:23 start_atlas.sh
2026-03-03 13:58:13 (15376): Guest Log:  *** Success! Shutting down the machine. ***
2026-03-03 13:58:13 (15376): VM Completion File Detected.
2026-03-03 13:58:13 (15376): Powering off VM.
2026-03-03 13:58:14 (15376): Successfully stopped VM.
2026-03-03 13:58:14 (15376): Deregistering VM. (boinc_920ff7aba9b33a79, slot#0)
2026-03-03 13:58:14 (15376): Removing network bandwidth throttle group from VM.
2026-03-03 13:58:15 (15376): Removing VM from VirtualBox.
2026-03-03 13:58:20 (15376): called boinc_finish(0)

</stderr_txt>
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