Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:58:26 (3464710): wrapper (7.7.26015): starting
05:58:26 (3464710): wrapper: running run_atlas (--nthreads 4)
[2026-03-02 05:58:26] Arguments: --nthreads 4
[2026-03-02 05:58:26] Threads: 4
[2026-03-02 05:58:26] Checking for CVMFS
[2026-03-02 05:58:26] No cvmfs_config command found, will try listing directly
[2026-03-02 05:58:26] CVMFS is ok
[2026-03-02 05:58:26] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-02 05:58:26] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-02 05:58:26] Further information can be found at the LHC@home message board.
[2026-03-02 05:58:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-02 05:58:26] Checking for apptainer binary...
[2026-03-02 05:58:26] which: no apptainer in ((null))
[2026-03-02 05:58:26] apptainer is not installed, using version from CVMFS
[2026-03-02 05:58:26] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-02 05:58:26] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot28/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut08.grid.cesnet.cz
[2026-03-02 05:58:26] apptainer works
[2026-03-02 05:58:26] Set ATHENA_PROC_NUMBER=4
[2026-03-02 05:58:26] Set ATHENA_CORE_NUMBER=4
[2026-03-02 05:58:26] Starting ATLAS job with PandaID=7035457968
[2026-03-02 05:58:26] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot28/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-02 12:45:35]  *** The last 200 lines of the pilot log: ***
[2026-03-02 12:45:35] 2026-03-02 11:44:45,000 | INFO     | reading metadata from: /scratch/boinc/var/slot28/slots/0/PanDA_Pilot-7035457968/jobReport.json
[2026-03-02 12:45:35] 2026-03-02 11:44:45,003 | INFO     | added worker_node to metadata from /scratch/boinc/var/slot28/slots/0/workernode_map.json
[2026-03-02 12:45:35] 2026-03-02 11:44:45,003 | INFO     | this job has now completed (state=finished)
[2026-03-02 12:45:35] 2026-03-02 11:44:45,003 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-02 12:45:35] 2026-03-02 11:44:45,004 | INFO     | log transfer has been attempted: DONE
[2026-03-02 12:45:35] 2026-03-02 11:44:45,004 | INFO     | job 7035457968 has finished - writing final server update
[2026-03-02 12:45:35] 2026-03-02 11:44:45,004 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_1720862/.job.ad'
[2026-03-02 12:45:35] 2026-03-02 11:44:45,004 | INFO     | total number of processed events: 400 (read)
[2026-03-02 12:45:35] 2026-03-02 11:44:45,016 | INFO     | using path: /scratch/boinc/var/slot28/slots/0/PanDA_Pilot-7035457968/memory_monitor_summary.json (trf name=prmon)
[2026-03-02 12:45:35] 2026-03-02 11:44:45,017 | INFO     | extracted standard info from prmon json
[2026-03-02 12:45:35] 2026-03-02 11:44:45,017 | INFO     | extracted standard memory fields from prmon json
[2026-03-02 12:45:35] 2026-03-02 11:44:45,017 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-02 12:45:35] 2026-03-02 11:44:45,017 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-02 12:45:35] 2026-03-02 11:44:45,017 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-02 12:45:35] 2026-03-02 11:44:45,024 | INFO     | fitting pss+swap vs Time
[2026-03-02 12:45:35] 2026-03-02 11:44:45,025 | INFO     | sum of square deviations: 19696741400.0
[2026-03-02 12:45:35] 2026-03-02 11:44:45,028 | INFO     | sum of deviations: 71943102380.99998
[2026-03-02 12:45:35] 2026-03-02 11:44:45,029 | INFO     | mean x: 1772439685.0
[2026-03-02 12:45:35] 2026-03-02 11:44:45,029 | INFO     | mean y: 2324095.3709273185
[2026-03-02 12:45:35] 2026-03-02 11:44:45,029 | INFO     | intersect: -6471579741.438464
[2026-03-02 12:45:35] 2026-03-02 11:44:45,029 | INFO     | chi2: 1.316054747720294
[2026-03-02 12:45:35] 2026-03-02 11:44:45,030 | INFO     | sum of square deviations: 18965499782.5
[2026-03-02 12:45:35] 2026-03-02 11:44:45,034 | INFO     | sum of deviations: 70572439884.0
[2026-03-02 12:45:35] 2026-03-02 11:44:45,034 | INFO     | mean x: 1772439532.5
[2026-03-02 12:45:35] 2026-03-02 11:44:45,034 | INFO     | mean y: 2323809.507614213
[2026-03-02 12:45:35] 2026-03-02 11:44:45,034 | INFO     | intersect: -6593093331.610972
[2026-03-02 12:45:35] 2026-03-02 11:44:45,035 | INFO     | chi2: 1.316214875982794
[2026-03-02 12:45:35] 2026-03-02 11:44:45,035 | INFO     | current chi2=1.316214875982794 (change=-0.012167294922760084 %)
[2026-03-02 12:45:35] 2026-03-02 11:44:45,035 | INFO     | right removable region: 393
[2026-03-02 12:45:35] 2026-03-02 11:44:45,036 | INFO     | sum of square deviations: 18965499782.5
[2026-03-02 12:45:35] 2026-03-02 11:44:45,040 | INFO     | sum of deviations: 19345703144.5
[2026-03-02 12:45:35] 2026-03-02 11:44:45,040 | INFO     | mean x: 1772439837.5
[2026-03-02 12:45:35] 2026-03-02 11:44:45,040 | INFO     | mean y: 2334997.3274111673
[2026-03-02 12:45:35] 2026-03-02 11:44:45,040 | INFO     | intersect: -1805637127.3724256
[2026-03-02 12:45:35] 2026-03-02 11:44:45,041 | INFO     | chi2: 0.0061870213927426275
[2026-03-02 12:45:35] 2026-03-02 11:44:45,041 | INFO     | current chi2=0.0061870213927426275 (change=99.5298811539976 %)
[2026-03-02 12:45:35] 2026-03-02 11:44:45,041 | INFO     | sum of square deviations: 18252584090.0
[2026-03-02 12:45:35] 2026-03-02 11:44:45,045 | INFO     | sum of deviations: 20274918493.0
[2026-03-02 12:45:35] 2026-03-02 11:44:45,045 | INFO     | mean x: 1772439990.0
[2026-03-02 12:45:35] 2026-03-02 11:44:45,045 | INFO     | mean y: 2334798.061696658
[2026-03-02 12:45:35] 2026-03-02 11:44:45,045 | INFO     | intersect: -1966486501.639749
[2026-03-02 12:45:35] 2026-03-02 11:44:45,046 | INFO     | chi2: 0.0054238449714515856
[2026-03-02 12:45:35] 2026-03-02 11:44:45,046 | INFO     | current chi2=0.0054238449714515856 (change=12.335118514156868 %)
[2026-03-02 12:45:35] 2026-03-02 11:44:45,046 | INFO     | left removable region: 20
[2026-03-02 12:45:35] 2026-03-02 11:44:45,046 | INFO     | sum of square deviations: 16091695202.0
[2026-03-02 12:45:35] 2026-03-02 11:44:45,049 | INFO     | sum of deviations: 20196809761.999996
[2026-03-02 12:45:35] 2026-03-02 11:44:45,050 | INFO     | mean x: 1772440112.0
[2026-03-02 12:45:35] 2026-03-02 11:44:45,050 | INFO     | mean y: 2334449.887399464
[2026-03-02 12:45:35] 2026-03-02 11:44:45,050 | INFO     | intersect: -2222268695.2276506
[2026-03-02 12:45:35] 2026-03-02 11:44:45,050 | INFO     | chi2: 0.0024380069463437117
[2026-03-02 12:45:35] 2026-03-02 11:44:45,051 | INFO     | current memory leak: 1.26 B/s (using 373 data points, chi2=0.00)
[2026-03-02 12:45:35] 2026-03-02 11:44:45,051 | INFO     | could have reported an average CPU frequency of 2670 MHz (17 samples)
[2026-03-02 12:45:35] 2026-03-02 11:44:45,052 | INFO     | ..............................
[2026-03-02 12:45:35] 2026-03-02 11:44:45,052 | INFO     | . Timing measurements:
[2026-03-02 12:45:35] 2026-03-02 11:44:45,052 | INFO     | . get job = 0 s
[2026-03-02 12:45:35] 2026-03-02 11:44:45,052 | INFO     | . initial setup = 6 s
[2026-03-02 12:45:35] 2026-03-02 11:44:45,052 | INFO     | . payload setup = 6 s
[2026-03-02 12:45:35] 2026-03-02 11:44:45,052 | INFO     | . stage-in = 0 s
[2026-03-02 12:45:35] 2026-03-02 11:44:45,052 | INFO     | . payload execution = 24336 s
[2026-03-02 12:45:35] 2026-03-02 11:44:45,052 | INFO     | . stage-out = 1 s
[2026-03-02 12:45:35] 2026-03-02 11:44:45,052 | INFO     | . log creation = 0 s
[2026-03-02 12:45:35] 2026-03-02 11:44:45,052 | INFO     | ..............................
[2026-03-02 12:45:35] 2026-03-02 11:44:45,142 | INFO     | 
[2026-03-02 12:45:35] 2026-03-02 11:44:45,143 | INFO     | job summary report
[2026-03-02 12:45:35] 2026-03-02 11:44:45,143 | INFO     | --------------------------------------------------
[2026-03-02 12:45:35] 2026-03-02 11:44:45,143 | INFO     | PanDA job id: 7035457968
[2026-03-02 12:45:35] 2026-03-02 11:44:45,143 | INFO     | task id: 48844242
[2026-03-02 12:45:35] 2026-03-02 11:44:45,143 | INFO     | errors: (none)
[2026-03-02 12:45:35] 2026-03-02 11:44:45,143 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-02 12:45:35] 2026-03-02 11:44:45,143 | INFO     | pilot state: finished 
[2026-03-02 12:45:35] 2026-03-02 11:44:45,143 | INFO     | transexitcode: 0
[2026-03-02 12:45:35] 2026-03-02 11:44:45,143 | INFO     | exeerrorcode: 0
[2026-03-02 12:45:35] 2026-03-02 11:44:45,143 | INFO     | exeerrordiag: 
[2026-03-02 12:45:35] 2026-03-02 11:44:45,143 | INFO     | exitcode: 0
[2026-03-02 12:45:35] 2026-03-02 11:44:45,143 | INFO     | exitmsg: OK
[2026-03-02 12:45:35] 2026-03-02 11:44:45,143 | INFO     | cpuconsumptiontime: 94535 s
[2026-03-02 12:45:35] 2026-03-02 11:44:45,144 | INFO     | nevents: 400
[2026-03-02 12:45:35] 2026-03-02 11:44:45,144 | INFO     | neventsw: 0
[2026-03-02 12:45:35] 2026-03-02 11:44:45,144 | INFO     | pid: 3473801
[2026-03-02 12:45:35] 2026-03-02 11:44:45,144 | INFO     | pgrp: 3473801
[2026-03-02 12:45:35] 2026-03-02 11:44:45,144 | INFO     | corecount: 4
[2026-03-02 12:45:35] 2026-03-02 11:44:45,144 | INFO     | event service: False
[2026-03-02 12:45:35] 2026-03-02 11:44:45,144 | INFO     | sizes: {0: 2281902, 1: 2282419, 12: 2282419, 24345: 2317605, 24346: 2317604, 24347: 2326680, 24348: 2326864, 24350: 2327122}
[2026-03-02 12:45:35] 2026-03-02 11:44:45,144 | INFO     | --------------------------------------------------
[2026-03-02 12:45:35] 2026-03-02 11:44:45,144 | INFO     | 
[2026-03-02 12:45:35] 2026-03-02 11:44:45,144 | INFO     | executing command: ls -lF /scratch/boinc/var/slot28/slots/0
[2026-03-02 12:45:35] 2026-03-02 11:44:45,168 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-02 12:45:35] 2026-03-02 11:44:45,168 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-02 12:45:35] 2026-03-02 11:44:45,168 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-02 12:45:35] 2026-03-02 11:44:45,168 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-02 12:45:35] 2026-03-02 11:44:45,168 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-02 12:45:35] 2026-03-02 11:44:45,169 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-02 12:45:35] 2026-03-02 11:44:45,169 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-02 12:45:35] 2026-03-02 11:44:45,169 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-02 12:45:35] 2026-03-02 11:44:45,169 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-02 12:45:35] 2026-03-02 11:44:45,169 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-02 12:45:35] 2026-03-02 11:44:45,169 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-02 12:45:35] 2026-03-02 11:44:45,169 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-02 12:45:35] 2026-03-02 11:44:45,169 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-02 12:45:35] 2026-03-02 11:44:45,169 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-02 12:45:35] 2026-03-02 11:44:45,169 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-02 12:45:35] 2026-03-02 11:44:45,169 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-02 12:45:35] 2026-03-02 11:44:45,169 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-02 12:45:35] 2026-03-02 11:44:45,170 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-02 12:45:35] 2026-03-02 11:44:45,170 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-02 12:45:35] 2026-03-02 11:44:45,170 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-02 12:45:35] 2026-03-02 11:44:45,170 | INFO     | job 7035457968 has completed (purged errors)
[2026-03-02 12:45:35] 2026-03-02 11:44:45,170 | INFO     | overall cleanup function is called
[2026-03-02 12:45:35] 2026-03-02 11:44:46,178 | INFO     | --- collectZombieJob: --- 10, [3473801]
[2026-03-02 12:45:35] 2026-03-02 11:44:46,178 | INFO     | zombie collector waiting for pid 3473801
[2026-03-02 12:45:35] 2026-03-02 11:44:46,179 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-02 12:45:35] 2026-03-02 11:44:46,179 | INFO     | collected zombie processes
[2026-03-02 12:45:35] 2026-03-02 11:44:46,179 | INFO     | will attempt to kill all subprocesses of pid=3473801
[2026-03-02 12:45:35] 2026-03-02 11:44:46,537 | INFO     | process IDs to be killed: [3473801] (in reverse order)
[2026-03-02 12:45:35] 2026-03-02 11:44:46,654 | WARNING  | found no corresponding commands to process id(s)
[2026-03-02 12:45:35] 2026-03-02 11:44:46,654 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-02 12:45:35] 2026-03-02 11:44:46,665 | INFO     | did not find any defunct processes belonging to 3473801
[2026-03-02 12:45:35] 2026-03-02 11:44:46,675 | INFO     | did not find any defunct processes belonging to 3473801
[2026-03-02 12:45:35] 2026-03-02 11:44:46,676 | INFO     | ready for new job
[2026-03-02 12:45:35] 2026-03-02 11:44:46,676 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-02 12:45:35] 2026-03-02 11:44:46,679 | INFO     | **************************************
[2026-03-02 12:45:35] 2026-03-02 11:44:46,679 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-02 12:45:35] 2026-03-02 11:44:46,679 | INFO     | **************************************
[2026-03-02 12:45:35] 2026-03-02 11:44:46,679 | INFO     | 
[2026-03-02 12:45:35] 2026-03-02 11:44:46,683 | INFO     | architecture information:
[2026-03-02 12:45:35] 2026-03-02 11:44:46,684 | INFO     | executing command: cat /etc/os-release
[2026-03-02 12:45:35] 2026-03-02 11:44:46,698 | INFO     | cat /etc/os-release:
[2026-03-02 12:45:35] NAME="CentOS Linux"
[2026-03-02 12:45:35] VERSION="7 (Core)"
[2026-03-02 12:45:35] ID="centos"
[2026-03-02 12:45:35] ID_LIKE="rhel fedora"
[2026-03-02 12:45:35] VERSION_ID="7"
[2026-03-02 12:45:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-02 12:45:35] ANSI_COLOR="0;31"
[2026-03-02 12:45:35] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-02 12:45:35] HOME_URL="https://www.centos.org/"
[2026-03-02 12:45:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-02 12:45:35] 
[2026-03-02 12:45:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-02 12:45:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-02 12:45:35] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-02 12:45:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-02 12:45:35] 
[2026-03-02 12:45:35] 2026-03-02 11:44:46,699 | INFO     | **************************************
[2026-03-02 12:45:35] 2026-03-02 11:44:47,202 | INFO     | executing command: df -mP /scratch/boinc/var/slot28/slots/0
[2026-03-02 12:45:35] 2026-03-02 11:44:47,217 | INFO     | sufficient remaining disk space (664886312960 B)
[2026-03-02 12:45:35] 2026-03-02 11:44:47,217 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-02 12:45:35] 2026-03-02 11:44:47,218 | INFO     | current server update state: UPDATING_FINAL
[2026-03-02 12:45:35] 2026-03-02 11:44:47,218 | INFO     | update_server=False
[2026-03-02 12:45:35] 2026-03-02 11:44:47,218 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-02 12:45:35] 2026-03-02 11:44:47,333 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-02 12:45:35] 2026-03-02 11:44:47,333 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-02 12:45:35] 2026-03-02 11:44:47,334 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-02 12:45:35] 2026-03-02 11:44:47,334 | INFO     | will abort loop
[2026-03-02 12:45:35] 2026-03-02 11:44:47,612 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-02 12:45:35] 2026-03-02 11:44:47,749 | INFO     | all payload control threads have been joined
[2026-03-02 12:45:35] 2026-03-02 11:44:47,849 | INFO     | all job control threads have been joined
[2026-03-02 12:45:35] 2026-03-02 11:44:48,219 | INFO     | [job] retrieve thread has finished
[2026-03-02 12:45:35] 2026-03-02 11:44:48,252 | INFO     | all data control threads have been joined
[2026-03-02 12:45:35] 2026-03-02 11:44:48,338 | INFO     | [job] job monitor thread has finished
[2026-03-02 12:45:35] 2026-03-02 11:44:48,371 | INFO     | [payload] validate_post thread has finished
[2026-03-02 12:45:35] 2026-03-02 11:44:48,747 | INFO     | [job] create_data_payload thread has finished
[2026-03-02 12:45:35] 2026-03-02 11:44:48,754 | INFO     | [payload] control thread has finished
[2026-03-02 12:45:35] 2026-03-02 11:44:48,854 | INFO     | [job] control thread has finished
[2026-03-02 12:45:35] 2026-03-02 11:44:48,946 | INFO     | [data] copytool_in thread has finished
[2026-03-02 12:45:35] 2026-03-02 11:44:49,059 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-02 12:45:35] 2026-03-02 11:44:49,120 | INFO     | [payload] execute_payloads thread has finished
[2026-03-02 12:45:35] 2026-03-02 11:44:49,257 | INFO     | [data] control thread has finished
[2026-03-02 12:45:35] 2026-03-02 11:44:49,335 | INFO     | [payload] validate_pre thread has finished
[2026-03-02 12:45:35] 2026-03-02 11:44:49,511 | INFO     | [payload] failed_post thread has finished
[2026-03-02 12:45:35] 2026-03-02 11:44:49,614 | INFO     | [data] copytool_out thread has finished
[2026-03-02 12:45:35] 2026-03-02 11:44:49,636 | INFO     | [job] validate thread has finished
[2026-03-02 12:45:35] 2026-03-02 11:44:50,152 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-02 12:45:35] 2026-03-02 11:44:51,157 | INFO     | [job] queue monitor thread has finished
[2026-03-02 12:45:35] 2026-03-02 11:44:53,065 | INFO     | [data] queue_monitor thread has finished
[2026-03-02 12:45:35] 2026-03-02 11:44:57,390 | INFO     | job.realtimelogging is not enabled
[2026-03-02 12:45:35] 2026-03-02 11:44:58,395 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-02 12:45:35] 2026-03-02 11:45:18,101 | INFO     | PID=3468881 has CPU usage=6.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-02 12:45:35] 2026-03-02 11:45:18,101 | INFO     | .. there are 12 such processes running
[2026-03-02 12:45:35] 2026-03-02 11:45:18,102 | INFO     | found 0 job(s) in 20 queues
[2026-03-02 12:45:35] 2026-03-02 11:45:18,103 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-02 12:45:35] 2026-03-02 11:45:18,103 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-02 12:45:35] 2026-03-02 11:45:23,745 | INFO     | [monitor] cgroup control has ended
[2026-03-02 12:45:35] 2026-03-02 11:45:24,244 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23021414111040)>', '<ExcThread(monitor, started 23021168621312)>']
[2026-03-02 12:45:35] 2026-03-02 11:45:25,137 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-02 12:45:35] 2026-03-02 11:45:25,137 | INFO     | [monitor] control thread has ended
[2026-03-02 12:45:35] 2026-03-02 11:45:29,268 | INFO     | all workflow threads have been joined
[2026-03-02 12:45:35] 2026-03-02 11:45:29,268 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-02 12:45:35] 2026-03-02 11:45:29,269 | INFO     | traces error code: 0
[2026-03-02 12:45:35] 2026-03-02 11:45:29,269 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-02 12:45:35] 2026-03-02 11:45:29,413 [wrapper] ==== pilot stdout END ====
[2026-03-02 12:45:35] 2026-03-02 11:45:29,415 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-02 12:45:35] 2026-03-02 11:45:29,417 [wrapper] pilotpid: 3468881
[2026-03-02 12:45:35] 2026-03-02 11:45:29,420 [wrapper] Pilot exit status: 0
[2026-03-02 12:45:35] 2026-03-02 11:45:29,428 [wrapper] pandaids: 7035457968
[2026-03-02 12:45:35] 2026-03-02 11:45:29,497 [wrapper] cleanup supervisor_pilot 3824746 3468883
[2026-03-02 12:45:35] 2026-03-02 11:45:29,500 [wrapper] Test setup, not cleaning
[2026-03-02 12:45:35] 2026-03-02 11:45:29,502 [wrapper] apfmon messages muted
[2026-03-02 12:45:35] 2026-03-02 11:45:29,504 [wrapper] ==== wrapper stdout END ====
[2026-03-02 12:45:35] 2026-03-02 11:45:29,507 [wrapper] ==== wrapper stderr END ====
[2026-03-02 12:45:35]  *** Error codes and diagnostics ***
[2026-03-02 12:45:35]     "exeErrorCode": 0,
[2026-03-02 12:45:35]     "exeErrorDiag": "",
[2026-03-02 12:45:35]     "pilotErrorCode": 0,
[2026-03-02 12:45:35]     "pilotErrorDiag": "",
[2026-03-02 12:45:35]  *** Listing of results directory ***
[2026-03-02 12:45:35] total 421620
[2026-03-02 12:45:35] -rw-r--r-- 1 boinc boinc    584627 Mar  1 19:35 pilot3.tar.gz
[2026-03-02 12:45:35] -rwx------ 1 boinc boinc     36322 Mar  1 19:36 runpilot2-wrapper.sh
[2026-03-02 12:45:35] -rw-r--r-- 1 boinc boinc      5111 Mar  1 19:36 queuedata.json
[2026-03-02 12:45:35] -rw-r--r-- 1 boinc boinc       100 Mar  2 05:58 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-02 12:45:35] -rwxr-xr-x 1 boinc boinc      7986 Mar  2 05:58 run_atlas
[2026-03-02 12:45:35] -rw-r--r-- 1 boinc boinc       105 Mar  2 05:58 job.xml
[2026-03-02 12:45:35] -rw-r--r-- 1 boinc boinc      6639 Mar  2 05:58 init_data.xml
[2026-03-02 12:45:35] -rw-r--r-- 2 boinc boinc 217885620 Mar  2 05:58 EVNT.48452844._000001.pool.root.1
[2026-03-02 12:45:35] drwxrwx--x 2 boinc boinc      4096 Mar  2 05:58 shared
[2026-03-02 12:45:35] -rw-r--r-- 2 boinc boinc    597986 Mar  2 05:58 input.tar.gz
[2026-03-02 12:45:35] -rw-r--r-- 2 boinc boinc     15845 Mar  2 05:58 start_atlas.sh
[2026-03-02 12:45:35] -rw-r--r-- 1 boinc boinc         0 Mar  2 05:58 boinc_lockfile
[2026-03-02 12:45:35] -rw-r--r-- 1 boinc boinc      2649 Mar  2 05:58 pandaJob.out
[2026-03-02 12:45:35] -rw------- 1 boinc boinc    998242 Mar  2 05:58 agis_schedconf.cvmfs.json
[2026-03-02 12:45:35] -rw------- 1 boinc boinc       452 Mar  2 05:58 workernode_map.json
[2026-03-02 12:45:35] drwx------ 5 boinc boinc      4096 Mar  2 05:58 pilot3
[2026-03-02 12:45:35] -rw------- 1 boinc boinc 202030079 Mar  2 12:44 HITS.48844242._000023.pool.root.1
[2026-03-02 12:45:35] -rw-r--r-- 1 boinc boinc       530 Mar  2 12:44 boinc_task_state.xml
[2026-03-02 12:45:35] -rw------- 1 boinc boinc      1032 Mar  2 12:44 memory_monitor_summary.json
[2026-03-02 12:45:35] -rw------- 1 boinc boinc   1513015 Mar  2 12:44 agis_ddmendpoints.agis.ALL.json
[2026-03-02 12:45:35] -rw------- 1 boinc boinc    556986 Mar  2 12:44 log.48844242._000023.job.log.tgz.1
[2026-03-02 12:45:35] -rw------- 1 boinc boinc      6403 Mar  2 12:44 heartbeat.json
[2026-03-02 12:45:35] -rw------- 1 boinc boinc        95 Mar  2 12:45 pilot_heartbeat.json
[2026-03-02 12:45:35] -rw-r--r-- 1 boinc boinc      8192 Mar  2 12:45 boinc_mmap_file
[2026-03-02 12:45:35] -rw-r--r-- 1 boinc boinc        28 Mar  2 12:45 wrapper_checkpoint.txt
[2026-03-02 12:45:35] -rw------- 1 boinc boinc      5088 Mar  2 12:45 pilotlog.txt
[2026-03-02 12:45:35] -rw------- 1 boinc boinc   3393477 Mar  2 12:45 log.48844242._000023.job.log.1
[2026-03-02 12:45:35] -rw------- 1 boinc boinc       357 Mar  2 12:45 output.list
[2026-03-02 12:45:35] -rw-r--r-- 1 boinc boinc       620 Mar  2 12:45 runtime_log
[2026-03-02 12:45:35] -rw------- 1 boinc boinc   3962880 Mar  2 12:45 result.tar.gz
[2026-03-02 12:45:35] -rw-r--r-- 1 boinc boinc      9205 Mar  2 12:45 runtime_log.err
[2026-03-02 12:45:35] -rw------- 1 boinc boinc       665 Mar  2 12:45 W1mLDmPp0G9n9Rq4apOajLDm4fhM0noT9bVooX4SDmiP9KDmE9v1Dm.diag
[2026-03-02 12:45:35] -rw-r--r-- 1 boinc boinc     21140 Mar  2 12:45 stderr.txt
[2026-03-02 12:45:35] HITS file was successfully produced:
[2026-03-02 12:45:35] -rw------- 1 boinc boinc 202030079 Mar  2 12:44 shared/HITS.pool.root.1
[2026-03-02 12:45:35]  *** Contents of shared directory: ***
[2026-03-02 12:45:35] total 414556
[2026-03-02 12:45:35] -rw-r--r-- 2 boinc boinc 217885620 Mar  2 05:58 ATLAS.root_0
[2026-03-02 12:45:35] -rw-r--r-- 2 boinc boinc    597986 Mar  2 05:58 input.tar.gz
[2026-03-02 12:45:35] -rw-r--r-- 2 boinc boinc     15845 Mar  2 05:58 start_atlas.sh
[2026-03-02 12:45:35] -rw------- 1 boinc boinc 202030079 Mar  2 12:44 HITS.pool.root.1
[2026-03-02 12:45:35] -rw------- 1 boinc boinc   3962880 Mar  2 12:45 result.tar.gz
12:45:37 (3464710): run_atlas exited; CPU time 95523.459810
12:45:37 (3464710): called boinc_finish(0)

</stderr_txt>
]]>

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