Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
12:01:40 (2988042): wrapper (7.7.26015): starting
12:01:40 (2988042): wrapper: running run_atlas (--nthreads 4)
[2026-03-02 12:01:40] Arguments: --nthreads 4
[2026-03-02 12:01:40] Threads: 4
[2026-03-02 12:01:40] Checking for CVMFS
[2026-03-02 12:01:40] No cvmfs_config command found, will try listing directly
[2026-03-02 12:01:40] CVMFS is ok
[2026-03-02 12:01:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-02 12:01:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-02 12:01:40] Further information can be found at the LHC@home message board.
[2026-03-02 12:01:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-02 12:01:40] Checking for apptainer binary...
[2026-03-02 12:01:40] which: no apptainer in ((null))
[2026-03-02 12:01:40] apptainer is not installed, using version from CVMFS
[2026-03-02 12:01:40] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-02 12:01:40] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot96/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut23.grid.cesnet.cz
[2026-03-02 12:01:40] apptainer works
[2026-03-02 12:01:40] Set ATHENA_PROC_NUMBER=4
[2026-03-02 12:01:40] Set ATHENA_CORE_NUMBER=4
[2026-03-02 12:01:40] Starting ATLAS job with PandaID=7035123774
[2026-03-02 12:01:40] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot96/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-02 13:08:04]  *** The last 200 lines of the pilot log: ***
[2026-03-02 13:08:04]  direct_access_wan=False
[2026-03-02 13:08:04]  domain=
[2026-03-02 13:08:04]  filesize=270575
[2026-03-02 13:08:04]  filetype=log
[2026-03-02 13:08:04]  guid=83da09b7-02ee-4e49-8207-f29cb0ac9f36
[2026-03-02 13:08:04]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-03-02 13:08:04]  is_altstaged=None
[2026-03-02 13:08:04]  is_tar=False
[2026-03-02 13:08:04]  lfn=log.48700890._000800.job.log.tgz.1
[2026-03-02 13:08:04]  mtime=0
[2026-03-02 13:08:04]  protocol_id=None
[2026-03-02 13:08:04]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-02 13:08:04]  replicas=None
[2026-03-02 13:08:04]  scope=mc23_13p6TeV
[2026-03-02 13:08:04]  status=None
[2026-03-02 13:08:04]  status_code=0
[2026-03-02 13:08:04]  storage_token=
[2026-03-02 13:08:04]  surl=/var/lib/boinc/var/slot96/slots/0/PanDA_Pilot-7035123774/log.48700890._000800.job.log.tgz.1
[2026-03-02 13:08:04]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/69/09/log.48700890._000800.job.log.tgz.1
[2026-03-02 13:08:04]  workdir=None
[2026-03-02 13:08:04] ]
[2026-03-02 13:08:04] 2026-03-02 12:07:10,824 | INFO     | transferring file log.48700890._000800.job.log.tgz.1 from /var/lib/boinc/var/slot96/slots/0/PanDA_Pilot-7035123774/log.48700890._000800.job.log.tgz.1 to /var/lib/b
[2026-03-02 13:08:04] 2026-03-02 12:07:10,824 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot96/slots/0/PanDA_Pilot-7035123774/log.48700890._000800.job.log.tgz.1 /var/lib/boinc/var/slot96/slots/0/lo
[2026-03-02 13:08:04] 2026-03-02 12:07:10,839 | INFO     | adding to output.list: log.48700890._000800.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/69/09/log.48700890._000800.job.log.tg
[2026-03-02 13:08:04] 2026-03-02 12:07:10,840 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-02 13:08:04] 2026-03-02 12:07:10,840 | INFO     | summary of transferred files:
[2026-03-02 13:08:04] 2026-03-02 12:07:10,840 | INFO     |  -- lfn=log.48700890._000800.job.log.tgz.1, status_code=0, status=transferred
[2026-03-02 13:08:04] 2026-03-02 12:07:10,840 | INFO     | stage-out finished correctly
[2026-03-02 13:08:04] 2026-03-02 12:07:10,889 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-02 13:08:04] 2026-03-02 12:07:10,945 | INFO     | job 7035123774 has state=finished
[2026-03-02 13:08:04] 2026-03-02 12:07:10,945 | INFO     | preparing for final server update for job 7035123774 in state='finished'
[2026-03-02 13:08:04] 2026-03-02 12:07:11,463 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2026-03-02 13:08:04] 2026-03-02 12:07:11,464 | INFO     | reading metadata from: /var/lib/boinc/var/slot96/slots/0/PanDA_Pilot-7035123774/jobReport.json
[2026-03-02 13:08:04] 2026-03-02 12:07:11,465 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot96/slots/0/workernode_map.json
[2026-03-02 13:08:04] 2026-03-02 12:07:11,465 | INFO     | this job has now completed (state=finished)
[2026-03-02 13:08:04] 2026-03-02 12:07:11,465 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-02 13:08:04] 2026-03-02 12:07:11,465 | INFO     | log transfer has been attempted: DONE
[2026-03-02 13:08:04] 2026-03-02 12:07:11,466 | INFO     | job 7035123774 has finished - writing final server update
[2026-03-02 13:08:04] 2026-03-02 12:07:11,466 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_16097/.job.ad'
[2026-03-02 13:08:04] 2026-03-02 12:07:11,466 | INFO     | total number of processed events: 400 (read)
[2026-03-02 13:08:04] 2026-03-02 12:07:11,484 | INFO     | using path: /var/lib/boinc/var/slot96/slots/0/PanDA_Pilot-7035123774/memory_monitor_summary.json (trf name=prmon)
[2026-03-02 13:08:04] 2026-03-02 12:07:11,485 | INFO     | extracted standard info from prmon json
[2026-03-02 13:08:04] 2026-03-02 12:07:11,485 | INFO     | extracted standard memory fields from prmon json
[2026-03-02 13:08:04] 2026-03-02 12:07:11,485 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-02 13:08:04] 2026-03-02 12:07:11,485 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-02 13:08:04] 2026-03-02 12:07:11,485 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-02 13:08:04] 2026-03-02 12:07:11,486 | INFO     | fitting pss+swap vs Time
[2026-03-02 13:08:04] 2026-03-02 12:07:11,486 | INFO     | sum of square deviations: 57407588.0
[2026-03-02 13:08:04] 2026-03-02 12:07:11,486 | INFO     | sum of deviations: 246808562.00000003
[2026-03-02 13:08:04] 2026-03-02 12:07:11,486 | INFO     | mean x: 1772451346.0
[2026-03-02 13:08:04] 2026-03-02 12:07:11,486 | INFO     | mean y: 2317859.754385965
[2026-03-02 13:08:04] 2026-03-02 12:07:11,486 | INFO     | intersect: -7617862384.035416
[2026-03-02 13:08:04] 2026-03-02 12:07:11,486 | INFO     | chi2: 0.00021738367959373066
[2026-03-02 13:08:04] 2026-03-02 12:07:11,486 | INFO     | current memory leak: 4.30 B/s (using 57 data points, chi2=0.00)
[2026-03-02 13:08:04] 2026-03-02 12:07:11,487 | INFO     | could have reported an average CPU frequency of 3584 MHz (6 samples)
[2026-03-02 13:08:04] 2026-03-02 12:07:11,487 | INFO     | ..............................
[2026-03-02 13:08:04] 2026-03-02 12:07:11,487 | INFO     | . Timing measurements:
[2026-03-02 13:08:04] 2026-03-02 12:07:11,487 | INFO     | . get job = 0 s
[2026-03-02 13:08:04] 2026-03-02 12:07:11,487 | INFO     | . initial setup = 5 s
[2026-03-02 13:08:04] 2026-03-02 12:07:11,487 | INFO     | . payload setup = 5 s
[2026-03-02 13:08:04] 2026-03-02 12:07:11,487 | INFO     | . stage-in = 0 s
[2026-03-02 13:08:04] 2026-03-02 12:07:11,487 | INFO     | . payload execution = 3897 s
[2026-03-02 13:08:04] 2026-03-02 12:07:11,487 | INFO     | . stage-out = 0 s
[2026-03-02 13:08:04] 2026-03-02 12:07:11,487 | INFO     | . log creation = 0 s
[2026-03-02 13:08:04] 2026-03-02 12:07:11,487 | INFO     | ..............................
[2026-03-02 13:08:04] 2026-03-02 12:07:11,538 | INFO     | 
[2026-03-02 13:08:04] 2026-03-02 12:07:11,538 | INFO     | job summary report
[2026-03-02 13:08:04] 2026-03-02 12:07:11,538 | INFO     | --------------------------------------------------
[2026-03-02 13:08:04] 2026-03-02 12:07:11,538 | INFO     | PanDA job id: 7035123774
[2026-03-02 13:08:04] 2026-03-02 12:07:11,538 | INFO     | task id: 48700890
[2026-03-02 13:08:04] 2026-03-02 12:07:11,538 | INFO     | errors: (none)
[2026-03-02 13:08:04] 2026-03-02 12:07:11,538 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-02 13:08:04] 2026-03-02 12:07:11,538 | INFO     | pilot state: finished 
[2026-03-02 13:08:04] 2026-03-02 12:07:11,538 | INFO     | transexitcode: 0
[2026-03-02 13:08:04] 2026-03-02 12:07:11,538 | INFO     | exeerrorcode: 0
[2026-03-02 13:08:04] 2026-03-02 12:07:11,538 | INFO     | exeerrordiag: 
[2026-03-02 13:08:04] 2026-03-02 12:07:11,538 | INFO     | exitcode: 0
[2026-03-02 13:08:04] 2026-03-02 12:07:11,538 | INFO     | exitmsg: OK
[2026-03-02 13:08:04] 2026-03-02 12:07:11,538 | INFO     | cpuconsumptiontime: 14917 s
[2026-03-02 13:08:04] 2026-03-02 12:07:11,538 | INFO     | nevents: 400
[2026-03-02 13:08:04] 2026-03-02 12:07:11,538 | INFO     | neventsw: 0
[2026-03-02 13:08:04] 2026-03-02 12:07:11,539 | INFO     | pid: 2998460
[2026-03-02 13:08:04] 2026-03-02 12:07:11,539 | INFO     | pgrp: 2998460
[2026-03-02 13:08:04] 2026-03-02 12:07:11,539 | INFO     | corecount: 4
[2026-03-02 13:08:04] 2026-03-02 12:07:11,539 | INFO     | event service: False
[2026-03-02 13:08:04] 2026-03-02 12:07:11,539 | INFO     | sizes: {0: 2282211, 11: 2282211, 3905: 2308068, 3907: 2317282}
[2026-03-02 13:08:04] 2026-03-02 12:07:11,539 | INFO     | --------------------------------------------------
[2026-03-02 13:08:04] 2026-03-02 12:07:11,539 | INFO     | 
[2026-03-02 13:08:04] 2026-03-02 12:07:11,539 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot96/slots/0
[2026-03-02 13:08:04] 2026-03-02 12:07:11,560 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-02 13:08:04] 2026-03-02 12:07:11,560 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-02 13:08:04] 2026-03-02 12:07:11,560 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-02 13:08:04] 2026-03-02 12:07:11,560 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-02 13:08:04] 2026-03-02 12:07:11,560 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-02 13:08:04] 2026-03-02 12:07:11,560 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-02 13:08:04] 2026-03-02 12:07:11,560 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-02 13:08:04] 2026-03-02 12:07:11,560 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-02 13:08:04] 2026-03-02 12:07:11,560 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-02 13:08:04] 2026-03-02 12:07:11,560 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-02 13:08:04] 2026-03-02 12:07:11,560 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-02 13:08:04] 2026-03-02 12:07:11,560 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-02 13:08:04] 2026-03-02 12:07:11,560 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-02 13:08:04] 2026-03-02 12:07:11,560 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-02 13:08:04] 2026-03-02 12:07:11,560 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-02 13:08:04] 2026-03-02 12:07:11,560 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-02 13:08:04] 2026-03-02 12:07:11,560 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-02 13:08:04] 2026-03-02 12:07:11,560 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-02 13:08:04] 2026-03-02 12:07:11,560 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-02 13:08:04] 2026-03-02 12:07:11,560 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-02 13:08:04] 2026-03-02 12:07:11,561 | INFO     | job 7035123774 has completed (purged errors)
[2026-03-02 13:08:04] 2026-03-02 12:07:11,561 | INFO     | overall cleanup function is called
[2026-03-02 13:08:04] 2026-03-02 12:07:12,566 | INFO     | --- collectZombieJob: --- 10, [2998460]
[2026-03-02 13:08:04] 2026-03-02 12:07:12,567 | INFO     | zombie collector waiting for pid 2998460
[2026-03-02 13:08:04] 2026-03-02 12:07:12,567 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-02 13:08:04] 2026-03-02 12:07:12,567 | INFO     | collected zombie processes
[2026-03-02 13:08:04] 2026-03-02 12:07:12,567 | INFO     | will attempt to kill all subprocesses of pid=2998460
[2026-03-02 13:08:04] 2026-03-02 12:07:13,032 | INFO     | process IDs to be killed: [2998460] (in reverse order)
[2026-03-02 13:08:04] 2026-03-02 12:07:13,264 | WARNING  | found no corresponding commands to process id(s)
[2026-03-02 13:08:04] 2026-03-02 12:07:13,265 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-02 13:08:04] 2026-03-02 12:07:13,297 | INFO     | did not find any defunct processes belonging to 2998460
[2026-03-02 13:08:04] 2026-03-02 12:07:13,327 | INFO     | did not find any defunct processes belonging to 2998460
[2026-03-02 13:08:04] 2026-03-02 12:07:13,327 | INFO     | ready for new job
[2026-03-02 13:08:04] 2026-03-02 12:07:13,327 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-02 13:08:04] 2026-03-02 12:07:13,328 | INFO     | **************************************
[2026-03-02 13:08:04] 2026-03-02 12:07:13,332 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-02 13:08:04] 2026-03-02 12:07:13,332 | INFO     | **************************************
[2026-03-02 13:08:04] 2026-03-02 12:07:13,332 | INFO     | 
[2026-03-02 13:08:04] 2026-03-02 12:07:13,338 | INFO     | architecture information:
[2026-03-02 13:08:04] 2026-03-02 12:07:13,338 | INFO     | executing command: cat /etc/os-release
[2026-03-02 13:08:04] 2026-03-02 12:07:13,353 | INFO     | cat /etc/os-release:
[2026-03-02 13:08:04] NAME="CentOS Linux"
[2026-03-02 13:08:04] VERSION="7 (Core)"
[2026-03-02 13:08:04] ID="centos"
[2026-03-02 13:08:04] ID_LIKE="rhel fedora"
[2026-03-02 13:08:04] VERSION_ID="7"
[2026-03-02 13:08:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-02 13:08:04] ANSI_COLOR="0;31"
[2026-03-02 13:08:04] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-02 13:08:04] HOME_URL="https://www.centos.org/"
[2026-03-02 13:08:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-02 13:08:04] 
[2026-03-02 13:08:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-02 13:08:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-02 13:08:04] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-02 13:08:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-02 13:08:04] 
[2026-03-02 13:08:04] 2026-03-02 12:07:13,354 | INFO     | **************************************
[2026-03-02 13:08:04] 2026-03-02 12:07:13,857 | INFO     | executing command: df -mP /var/lib/boinc/var/slot96/slots/0
[2026-03-02 13:08:04] 2026-03-02 12:07:13,872 | INFO     | sufficient remaining disk space (20598226944 B)
[2026-03-02 13:08:04] 2026-03-02 12:07:13,872 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-02 13:08:04] 2026-03-02 12:07:13,872 | INFO     | current server update state: UPDATING_FINAL
[2026-03-02 13:08:04] 2026-03-02 12:07:13,872 | INFO     | update_server=False
[2026-03-02 13:08:04] 2026-03-02 12:07:13,873 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-02 13:08:04] 2026-03-02 12:07:13,873 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-02 13:08:04] 2026-03-02 12:07:13,873 | INFO     | aborting loop
[2026-03-02 13:08:04] 2026-03-02 12:07:13,893 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-02 13:08:04] 2026-03-02 12:07:14,305 | INFO     | all data control threads have been joined
[2026-03-02 13:08:04] 2026-03-02 12:07:14,737 | INFO     | all payload control threads have been joined
[2026-03-02 13:08:04] 2026-03-02 12:07:14,859 | INFO     | all job control threads have been joined
[2026-03-02 13:08:04] 2026-03-02 12:07:14,878 | INFO     | [job] retrieve thread has finished
[2026-03-02 13:08:04] 2026-03-02 12:07:14,878 | INFO     | [job] job monitor thread has finished
[2026-03-02 13:08:04] 2026-03-02 12:07:14,925 | INFO     | [job] validate thread has finished
[2026-03-02 13:08:04] 2026-03-02 12:07:14,930 | INFO     | [job] create_data_payload thread has finished
[2026-03-02 13:08:04] 2026-03-02 12:07:15,072 | INFO     | [payload] execute_payloads thread has finished
[2026-03-02 13:08:04] 2026-03-02 12:07:15,206 | INFO     | [payload] validate_pre thread has finished
[2026-03-02 13:08:04] 2026-03-02 12:07:15,311 | INFO     | [data] control thread has finished
[2026-03-02 13:08:04] 2026-03-02 12:07:15,342 | INFO     | [data] copytool_in thread has finished
[2026-03-02 13:08:04] 2026-03-02 12:07:15,426 | INFO     | [payload] validate_post thread has finished
[2026-03-02 13:08:04] 2026-03-02 12:07:15,742 | INFO     | [payload] control thread has finished
[2026-03-02 13:08:04] 2026-03-02 12:07:15,864 | INFO     | [job] control thread has finished
[2026-03-02 13:08:04] 2026-03-02 12:07:15,898 | INFO     | [data] copytool_out thread has finished
[2026-03-02 13:08:04] 2026-03-02 12:07:16,065 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-02 13:08:04] 2026-03-02 12:07:16,285 | INFO     | [payload] failed_post thread has finished
[2026-03-02 13:08:04] 2026-03-02 12:07:16,547 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-02 13:08:04] 2026-03-02 12:07:16,953 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-02 13:08:04] 2026-03-02 12:07:17,552 | INFO     | [job] queue monitor thread has finished
[2026-03-02 13:08:04] 2026-03-02 12:07:20,958 | INFO     | [data] queue_monitor thread has finished
[2026-03-02 13:08:04] 2026-03-02 12:07:43,391 | INFO     | PID=2992581 has CPU usage=5.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-02 13:08:04] 2026-03-02 12:07:43,391 | INFO     | .. there are 46 such processes running
[2026-03-02 13:08:04] 2026-03-02 12:07:43,392 | INFO     | found 0 job(s) in 20 queues
[2026-03-02 13:08:04] 2026-03-02 12:07:43,392 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-02 13:08:04] 2026-03-02 12:07:43,392 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-02 13:08:04] 2026-03-02 12:07:59,144 | INFO     | [monitor] cgroup control has ended
[2026-03-02 13:08:04] 2026-03-02 12:07:59,347 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22795219875648)>', '<ExcThread(monitor, started 22794976102144)>']
[2026-03-02 13:08:04] 2026-03-02 12:07:59,470 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-02 13:08:04] 2026-03-02 12:07:59,471 | INFO     | [monitor] control thread has ended
[2026-03-02 13:08:04] 2026-03-02 12:08:04,371 | INFO     | all workflow threads have been joined
[2026-03-02 13:08:04] 2026-03-02 12:08:04,372 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-02 13:08:04] 2026-03-02 12:08:04,372 | INFO     | traces error code: 0
[2026-03-02 13:08:04] 2026-03-02 12:08:04,372 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-02 13:08:04] 2026-03-02 12:08:04,563 [wrapper] ==== pilot stdout END ====
[2026-03-02 13:08:04] 2026-03-02 12:08:04,565 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-02 13:08:04] 2026-03-02 12:08:04,567 [wrapper] pilotpid: 2992581
[2026-03-02 13:08:04] 2026-03-02 12:08:04,569 [wrapper] Pilot exit status: 0
[2026-03-02 13:08:04] 2026-03-02 12:08:04,577 [wrapper] pandaids: 7035123774
[2026-03-02 13:08:04] 2026-03-02 12:08:04,702 [wrapper] cleanup supervisor_pilot 3560717 2992582
[2026-03-02 13:08:04] 2026-03-02 12:08:04,705 [wrapper] Test setup, not cleaning
[2026-03-02 13:08:04] 2026-03-02 12:08:04,707 [wrapper] apfmon messages muted
[2026-03-02 13:08:04] 2026-03-02 12:08:04,708 [wrapper] ==== wrapper stdout END ====
[2026-03-02 13:08:04] 2026-03-02 12:08:04,709 [wrapper] ==== wrapper stderr END ====
[2026-03-02 13:08:04]  *** Error codes and diagnostics ***
[2026-03-02 13:08:04]     "exeErrorCode": 0,
[2026-03-02 13:08:04]     "exeErrorDiag": "",
[2026-03-02 13:08:04]     "pilotErrorCode": 0,
[2026-03-02 13:08:04]     "pilotErrorDiag": "",
[2026-03-02 13:08:04]  *** Listing of results directory ***
[2026-03-02 13:08:04] total 334824
[2026-03-02 13:08:04] -rwx------. 1 boinc boinc     36322 Mar  1 16:13 runpilot2-wrapper.sh
[2026-03-02 13:08:04] -rw-r--r--. 1 boinc boinc      5111 Mar  1 16:13 queuedata.json
[2026-03-02 13:08:04] -rw-r--r--. 1 boinc boinc    584627 Mar  1 16:13 pilot3.tar.gz
[2026-03-02 13:08:04] -rw-r--r--. 1 boinc boinc       100 Mar  2 12:01 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-02 13:08:04] -rwxr-xr-x. 1 boinc boinc      7986 Mar  2 12:01 run_atlas
[2026-03-02 13:08:04] -rw-r--r--. 1 boinc boinc       105 Mar  2 12:01 job.xml
[2026-03-02 13:08:04] -rw-r--r--. 1 boinc boinc      6703 Mar  2 12:01 init_data.xml
[2026-03-02 13:08:04] -rw-r--r--. 2 boinc boinc 189870088 Mar  2 12:01 EVNT.48700888._000034.pool.root.1
[2026-03-02 13:08:04] -rw-r--r--. 2 boinc boinc     15845 Mar  2 12:01 start_atlas.sh
[2026-03-02 13:08:04] drwxrwx--x. 2 boinc boinc      4096 Mar  2 12:01 shared
[2026-03-02 13:08:04] -rw-r--r--. 2 boinc boinc    597916 Mar  2 12:01 input.tar.gz
[2026-03-02 13:08:04] -rw-r--r--. 1 boinc boinc         0 Mar  2 12:01 boinc_lockfile
[2026-03-02 13:08:04] -rw-r--r--. 1 boinc boinc      2509 Mar  2 12:01 pandaJob.out
[2026-03-02 13:08:04] -rw-------. 1 boinc boinc    998143 Mar  2 12:01 agis_schedconf.cvmfs.json
[2026-03-02 13:08:04] -rw-------. 1 boinc boinc   1513015 Mar  2 12:01 agis_ddmendpoints.agis.ALL.json
[2026-03-02 13:08:04] -rw-------. 1 boinc boinc       443 Mar  2 12:01 workernode_map.json
[2026-03-02 13:08:04] drwx------. 5 boinc boinc      4096 Mar  2 12:01 pilot3
[2026-03-02 13:08:04] -rw-------. 1 boinc boinc 147348167 Mar  2 13:06 HITS.48700890._000800.pool.root.1
[2026-03-02 13:08:04] -rw-r--r--. 1 boinc boinc       529 Mar  2 13:06 boinc_task_state.xml
[2026-03-02 13:08:04] -rw-------. 1 boinc boinc      1029 Mar  2 13:07 memory_monitor_summary.json
[2026-03-02 13:08:04] -rw-------. 1 boinc boinc    270575 Mar  2 13:07 log.48700890._000800.job.log.tgz.1
[2026-03-02 13:08:04] -rw-------. 1 boinc boinc      6343 Mar  2 13:07 heartbeat.json
[2026-03-02 13:08:04] -rw-------. 1 boinc boinc        95 Mar  2 13:07 pilot_heartbeat.json
[2026-03-02 13:08:04] -rw-r--r--. 1 boinc boinc      8192 Mar  2 13:08 boinc_mmap_file
[2026-03-02 13:08:04] -rw-r--r--. 1 boinc boinc        27 Mar  2 13:08 wrapper_checkpoint.txt
[2026-03-02 13:08:04] -rw-------. 1 boinc boinc      4829 Mar  2 13:08 pilotlog.txt
[2026-03-02 13:08:04] -rw-------. 1 boinc boinc    585286 Mar  2 13:08 log.48700890._000800.job.log.1
[2026-03-02 13:08:04] -rw-------. 1 boinc boinc       357 Mar  2 13:08 output.list
[2026-03-02 13:08:04] -rw-r--r--. 1 boinc boinc       620 Mar  2 13:08 runtime_log
[2026-03-02 13:08:04] -rw-------. 1 boinc boinc    870400 Mar  2 13:08 result.tar.gz
[2026-03-02 13:08:04] -rw-r--r--. 1 boinc boinc      9204 Mar  2 13:08 runtime_log.err
[2026-03-02 13:08:04] -rw-------. 1 boinc boinc       660 Mar  2 13:08 RVfMDmffxG9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDminALDmQR4tQn.diag
[2026-03-02 13:08:04] -rw-r--r--. 1 boinc boinc     20882 Mar  2 13:08 stderr.txt
[2026-03-02 13:08:04] HITS file was successfully produced:
[2026-03-02 13:08:04] -rw-------. 1 boinc boinc 147348167 Mar  2 13:06 shared/HITS.pool.root.1
[2026-03-02 13:08:04]  *** Contents of shared directory: ***
[2026-03-02 13:08:04] total 330780
[2026-03-02 13:08:04] -rw-r--r--. 2 boinc boinc 189870088 Mar  2 12:01 ATLAS.root_0
[2026-03-02 13:08:04] -rw-r--r--. 2 boinc boinc     15845 Mar  2 12:01 start_atlas.sh
[2026-03-02 13:08:04] -rw-r--r--. 2 boinc boinc    597916 Mar  2 12:01 input.tar.gz
[2026-03-02 13:08:04] -rw-------. 1 boinc boinc 147348167 Mar  2 13:06 HITS.pool.root.1
[2026-03-02 13:08:04] -rw-------. 1 boinc boinc    870400 Mar  2 13:08 result.tar.gz
13:08:06 (2988042): run_atlas exited; CPU time 15088.323014
13:08:06 (2988042): called boinc_finish(0)

</stderr_txt>
]]>

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