Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:04:07 (44636): wrapper (7.7.26015): starting
11:04:07 (44636): wrapper: running run_atlas (--nthreads 4)
[2026-03-02 11:04:07] Arguments: --nthreads 4
[2026-03-02 11:04:07] Threads: 4
[2026-03-02 11:04:07] Checking for CVMFS
[2026-03-02 11:04:07] No cvmfs_config command found, will try listing directly
[2026-03-02 11:04:07] CVMFS is ok
[2026-03-02 11:04:07] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-02 11:04:07] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-02 11:04:07] Further information can be found at the LHC@home message board.
[2026-03-02 11:04:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-02 11:04:07] Checking for apptainer binary...
[2026-03-02 11:04:07] which: no apptainer in ((null))
[2026-03-02 11:04:07] apptainer is not installed, using version from CVMFS
[2026-03-02 11:04:07] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-02 11:04:07] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot44/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut04.grid.cesnet.cz
[2026-03-02 11:04:07] apptainer works
[2026-03-02 11:04:07] Set ATHENA_PROC_NUMBER=4
[2026-03-02 11:04:07] Set ATHENA_CORE_NUMBER=4
[2026-03-02 11:04:07] Starting ATLAS job with PandaID=7035116404
[2026-03-02 11:04:07] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot44/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-02 14:54:55]  *** The last 200 lines of the pilot log: ***
[2026-03-02 14:54:55] 2026-03-02 13:53:58,530 | INFO     | mean y: 2328838.4867256638
[2026-03-02 14:54:55] 2026-03-02 13:53:58,530 | INFO     | intersect: -11250314295.929535
[2026-03-02 14:54:55] 2026-03-02 13:53:58,530 | INFO     | chi2: 2.0896598404613096
[2026-03-02 14:54:55] 2026-03-02 13:53:58,530 | INFO     | sum of square deviations: 3346927870.0
[2026-03-02 14:54:55] 2026-03-02 13:53:58,532 | INFO     | sum of deviations: 36059397747.99999
[2026-03-02 14:54:55] 2026-03-02 13:53:58,532 | INFO     | mean x: 1772452601.0
[2026-03-02 14:54:55] 2026-03-02 13:53:58,532 | INFO     | mean y: 2337426.3167420817
[2026-03-02 14:54:55] 2026-03-02 13:53:58,532 | INFO     | intersect: -19093853412.398922
[2026-03-02 14:54:55] 2026-03-02 13:53:58,533 | INFO     | chi2: 1.321811188514695
[2026-03-02 14:54:55] 2026-03-02 13:53:58,533 | INFO     | current chi2=1.321811188514695 (change=36.74515043448917 %)
[2026-03-02 14:54:55] 2026-03-02 13:53:58,533 | INFO     | sum of square deviations: 3124858590.0
[2026-03-02 14:54:55] 2026-03-02 13:53:58,534 | INFO     | sum of deviations: 35134393107.50001
[2026-03-02 14:54:55] 2026-03-02 13:53:58,534 | INFO     | mean x: 1772452448.5
[2026-03-02 14:54:55] 2026-03-02 13:53:58,535 | INFO     | mean y: 2336791.0046296297
[2026-03-02 14:54:55] 2026-03-02 13:53:58,535 | INFO     | intersect: -19926258150.61476
[2026-03-02 14:54:55] 2026-03-02 13:53:58,535 | INFO     | chi2: 1.3221181504999937
[2026-03-02 14:54:55] 2026-03-02 13:53:58,535 | INFO     | current chi2=1.3221181504999937 (change=-0.023222831518289716 %)
[2026-03-02 14:54:55] 2026-03-02 13:53:58,535 | INFO     | right removable region: 215
[2026-03-02 14:54:55] 2026-03-02 13:53:58,536 | INFO     | sum of square deviations: 3346927870.0
[2026-03-02 14:54:55] 2026-03-02 13:53:58,537 | INFO     | sum of deviations: -6989978714.999999
[2026-03-02 14:54:55] 2026-03-02 13:53:58,537 | INFO     | mean x: 1772452906.0
[2026-03-02 14:54:55] 2026-03-02 13:53:58,537 | INFO     | mean y: 2348126.619909502
[2026-03-02 14:54:55] 2026-03-02 13:53:58,537 | INFO     | intersect: 3704073579.78299
[2026-03-02 14:54:55] 2026-03-02 13:53:58,538 | INFO     | chi2: 0.7910130150644226
[2026-03-02 14:54:55] 2026-03-02 13:53:58,538 | INFO     | current chi2=0.7910130150644226 (change=62.146326414073215 %)
[2026-03-02 14:54:55] 2026-03-02 13:53:58,538 | INFO     | sum of square deviations: 3124858590.0
[2026-03-02 14:54:55] 2026-03-02 13:53:58,540 | INFO     | sum of deviations: -6238143985.500001
[2026-03-02 14:54:55] 2026-03-02 13:53:58,540 | INFO     | mean x: 1772453058.5
[2026-03-02 14:54:55] 2026-03-02 13:53:58,540 | INFO     | mean y: 2347607.486111111
[2026-03-02 14:54:55] 2026-03-02 13:53:58,540 | INFO     | intersect: 3540689285.3611593
[2026-03-02 14:54:55] 2026-03-02 13:53:58,541 | INFO     | chi2: 0.7864022739490045
[2026-03-02 14:54:55] 2026-03-02 13:53:58,541 | INFO     | current chi2=0.7864022739490045 (change=0.5828906765892499 %)
[2026-03-02 14:54:55] 2026-03-02 13:53:58,541 | INFO     | left removable region: 20
[2026-03-02 14:54:55] 2026-03-02 13:53:58,541 | INFO     | sum of square deviations: 2299168690.0
[2026-03-02 14:54:55] 2026-03-02 13:53:58,542 | INFO     | sum of deviations: 4180462918.9999995
[2026-03-02 14:54:55] 2026-03-02 13:53:58,542 | INFO     | mean x: 1772453028.0
[2026-03-02 14:54:55] 2026-03-02 13:53:58,543 | INFO     | mean y: 2358981.041025641
[2026-03-02 14:54:55] 2026-03-02 13:53:58,543 | INFO     | intersect: -3220403311.8915854
[2026-03-02 14:54:55] 2026-03-02 13:53:58,543 | INFO     | chi2: 0.00037941758738760264
[2026-03-02 14:54:55] 2026-03-02 13:53:58,543 | INFO     | current memory leak: 1.82 B/s (using 195 data points, chi2=0.00)
[2026-03-02 14:54:55] 2026-03-02 13:53:58,544 | INFO     | could have reported an average CPU frequency of 2504 MHz (11 samples)
[2026-03-02 14:54:55] 2026-03-02 13:53:58,544 | INFO     | ..............................
[2026-03-02 14:54:55] 2026-03-02 13:53:58,544 | INFO     | . Timing measurements:
[2026-03-02 14:54:55] 2026-03-02 13:53:58,544 | INFO     | . get job = 0 s
[2026-03-02 14:54:55] 2026-03-02 13:53:58,544 | INFO     | . initial setup = 6 s
[2026-03-02 14:54:55] 2026-03-02 13:53:58,544 | INFO     | . payload setup = 6 s
[2026-03-02 14:54:55] 2026-03-02 13:53:58,544 | INFO     | . stage-in = 0 s
[2026-03-02 14:54:55] 2026-03-02 13:53:58,544 | INFO     | . payload execution = 13745 s
[2026-03-02 14:54:55] 2026-03-02 13:53:58,545 | INFO     | . stage-out = 1 s
[2026-03-02 14:54:55] 2026-03-02 13:53:58,545 | INFO     | . log creation = 0 s
[2026-03-02 14:54:55] 2026-03-02 13:53:58,545 | INFO     | ..............................
[2026-03-02 14:54:55] 2026-03-02 13:53:58,635 | INFO     | 
[2026-03-02 14:54:55] 2026-03-02 13:53:58,635 | INFO     | job summary report
[2026-03-02 14:54:55] 2026-03-02 13:53:58,636 | INFO     | --------------------------------------------------
[2026-03-02 14:54:55] 2026-03-02 13:53:58,636 | INFO     | PanDA job id: 7035116404
[2026-03-02 14:54:55] 2026-03-02 13:53:58,636 | INFO     | task id: 48838416
[2026-03-02 14:54:55] 2026-03-02 13:53:58,636 | INFO     | errors: (none)
[2026-03-02 14:54:55] 2026-03-02 13:53:58,636 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-02 14:54:55] 2026-03-02 13:53:58,636 | INFO     | pilot state: finished 
[2026-03-02 14:54:55] 2026-03-02 13:53:58,636 | INFO     | transexitcode: 0
[2026-03-02 14:54:55] 2026-03-02 13:53:58,636 | INFO     | exeerrorcode: 0
[2026-03-02 14:54:55] 2026-03-02 13:53:58,636 | INFO     | exeerrordiag: 
[2026-03-02 14:54:55] 2026-03-02 13:53:58,636 | INFO     | exitcode: 0
[2026-03-02 14:54:55] 2026-03-02 13:53:58,636 | INFO     | exitmsg: OK
[2026-03-02 14:54:55] 2026-03-02 13:53:58,636 | INFO     | cpuconsumptiontime: 52227 s
[2026-03-02 14:54:55] 2026-03-02 13:53:58,636 | INFO     | nevents: 400
[2026-03-02 14:54:55] 2026-03-02 13:53:58,637 | INFO     | neventsw: 0
[2026-03-02 14:54:55] 2026-03-02 13:53:58,637 | INFO     | pid: 53447
[2026-03-02 14:54:55] 2026-03-02 13:53:58,637 | INFO     | pgrp: 53447
[2026-03-02 14:54:55] 2026-03-02 13:53:58,637 | INFO     | corecount: 4
[2026-03-02 14:54:55] 2026-03-02 13:53:58,637 | INFO     | event service: False
[2026-03-02 14:54:55] 2026-03-02 13:53:58,637 | INFO     | sizes: {0: 2281805, 1: 2282266, 11: 2282266, 13753: 2312566, 13756: 2321586, 13758: 2321642, 13760: 2321964}
[2026-03-02 14:54:55] 2026-03-02 13:53:58,637 | INFO     | --------------------------------------------------
[2026-03-02 14:54:55] 2026-03-02 13:53:58,637 | INFO     | 
[2026-03-02 14:54:55] 2026-03-02 13:53:58,637 | INFO     | executing command: ls -lF /scratch/boinc/var/slot44/slots/0
[2026-03-02 14:54:55] 2026-03-02 13:53:58,663 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-02 14:54:55] 2026-03-02 13:53:58,664 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-02 14:54:55] 2026-03-02 13:53:58,664 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-02 14:54:55] 2026-03-02 13:53:58,664 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-02 14:54:55] 2026-03-02 13:53:58,664 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-02 14:54:55] 2026-03-02 13:53:58,664 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-02 14:54:55] 2026-03-02 13:53:58,664 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-02 14:54:55] 2026-03-02 13:53:58,664 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-02 14:54:55] 2026-03-02 13:53:58,664 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-02 14:54:55] 2026-03-02 13:53:58,664 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-02 14:54:55] 2026-03-02 13:53:58,664 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-02 14:54:55] 2026-03-02 13:53:58,665 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-02 14:54:55] 2026-03-02 13:53:58,665 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-02 14:54:55] 2026-03-02 13:53:58,665 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-02 14:54:55] 2026-03-02 13:53:58,665 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-02 14:54:55] 2026-03-02 13:53:58,665 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-02 14:54:55] 2026-03-02 13:53:58,665 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-02 14:54:55] 2026-03-02 13:53:58,665 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-02 14:54:55] 2026-03-02 13:53:58,665 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-02 14:54:55] 2026-03-02 13:53:58,665 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-02 14:54:55] 2026-03-02 13:53:58,665 | INFO     | job 7035116404 has completed (purged errors)
[2026-03-02 14:54:55] 2026-03-02 13:53:58,666 | INFO     | overall cleanup function is called
[2026-03-02 14:54:55] 2026-03-02 13:53:59,673 | INFO     | --- collectZombieJob: --- 10, [53447]
[2026-03-02 14:54:55] 2026-03-02 13:53:59,674 | INFO     | zombie collector waiting for pid 53447
[2026-03-02 14:54:55] 2026-03-02 13:53:59,676 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-02 14:54:55] 2026-03-02 13:53:59,676 | INFO     | collected zombie processes
[2026-03-02 14:54:55] 2026-03-02 13:53:59,676 | INFO     | will attempt to kill all subprocesses of pid=53447
[2026-03-02 14:54:55] 2026-03-02 13:54:00,280 | INFO     | process IDs to be killed: [53447] (in reverse order)
[2026-03-02 14:54:55] 2026-03-02 13:54:00,420 | WARNING  | found no corresponding commands to process id(s)
[2026-03-02 14:54:55] 2026-03-02 13:54:00,421 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-02 14:54:55] 2026-03-02 13:54:00,448 | INFO     | did not find any defunct processes belonging to 53447
[2026-03-02 14:54:55] 2026-03-02 13:54:00,474 | INFO     | did not find any defunct processes belonging to 53447
[2026-03-02 14:54:55] 2026-03-02 13:54:00,474 | INFO     | ready for new job
[2026-03-02 14:54:55] 2026-03-02 13:54:00,475 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-02 14:54:55] 2026-03-02 13:54:00,477 | INFO     | **************************************
[2026-03-02 14:54:55] 2026-03-02 13:54:00,477 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-02 14:54:55] 2026-03-02 13:54:00,477 | INFO     | **************************************
[2026-03-02 14:54:55] 2026-03-02 13:54:00,477 | INFO     | 
[2026-03-02 14:54:55] 2026-03-02 13:54:00,482 | INFO     | architecture information:
[2026-03-02 14:54:55] 2026-03-02 13:54:00,482 | INFO     | executing command: cat /etc/os-release
[2026-03-02 14:54:55] 2026-03-02 13:54:00,498 | INFO     | cat /etc/os-release:
[2026-03-02 14:54:55] NAME="CentOS Linux"
[2026-03-02 14:54:55] VERSION="7 (Core)"
[2026-03-02 14:54:55] ID="centos"
[2026-03-02 14:54:55] ID_LIKE="rhel fedora"
[2026-03-02 14:54:55] VERSION_ID="7"
[2026-03-02 14:54:55] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-02 14:54:55] ANSI_COLOR="0;31"
[2026-03-02 14:54:55] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-02 14:54:55] HOME_URL="https://www.centos.org/"
[2026-03-02 14:54:55] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-02 14:54:55] 
[2026-03-02 14:54:55] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-02 14:54:55] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-02 14:54:55] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-02 14:54:55] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-02 14:54:55] 
[2026-03-02 14:54:55] 2026-03-02 13:54:00,498 | INFO     | **************************************
[2026-03-02 14:54:55] 2026-03-02 13:54:00,543 | WARNING  | process 53447 can no longer be monitored (due to stat problems) - aborting
[2026-03-02 14:54:55] 2026-03-02 13:54:00,789 | INFO     | using path: /scratch/boinc/var/slot44/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-02 14:54:55] 2026-03-02 13:54:00,790 | INFO     | reaping zombies for max 20 seconds
[2026-03-02 14:54:55] 2026-03-02 13:54:00,805 | INFO     | checking for looping job (in state=finished)
[2026-03-02 14:54:55] 2026-03-02 13:54:00,805 | INFO     | using looping job limit: 7200 s
[2026-03-02 14:54:55] 2026-03-02 13:54:00,806 | INFO     | skipping file size check of payload stdout file (/scratch/boinc/var/slot44/slots/0/PanDA_Pilot-7035116404/payload.stdout) since it has not been created yet
[2026-03-02 14:54:55] 2026-03-02 13:54:00,806 | INFO     | executing command: df -mP /scratch/boinc/var/slot44/slots/0
[2026-03-02 14:54:55] 2026-03-02 13:54:00,822 | INFO     | sufficient remaining disk space (669016653824 B)
[2026-03-02 14:54:55] 2026-03-02 13:54:00,822 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-03-02 14:54:55] 2026-03-02 13:54:00,822 | INFO     | output file size check: skipping output file /scratch/boinc/var/slot44/slots/0/PanDA_Pilot-7035116404/HITS.48838416._009349.pool.root.1 since it does not exist
[2026-03-02 14:54:55] 2026-03-02 13:54:01,001 | INFO     | executing command: df -mP /scratch/boinc/var/slot44/slots/0
[2026-03-02 14:54:55] 2026-03-02 13:54:01,017 | INFO     | sufficient remaining disk space (669016653824 B)
[2026-03-02 14:54:55] 2026-03-02 13:54:01,018 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-02 14:54:55] 2026-03-02 13:54:01,018 | INFO     | current server update state: UPDATING_FINAL
[2026-03-02 14:54:55] 2026-03-02 13:54:01,018 | INFO     | update_server=False
[2026-03-02 14:54:55] 2026-03-02 13:54:01,018 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-02 14:54:55] 2026-03-02 13:54:01,191 | INFO     | number of running child processes to parent process 53447: 1
[2026-03-02 14:54:55] 2026-03-02 13:54:01,191 | INFO     | maximum number of monitored processes: 6
[2026-03-02 14:54:55] 2026-03-02 13:54:01,192 | INFO     | aborting job monitoring since job object (job id=7035116404) has expired
[2026-03-02 14:54:55] 2026-03-02 13:54:01,192 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-02 14:54:55] 2026-03-02 13:54:01,192 | INFO     | will abort loop
[2026-03-02 14:54:55] 2026-03-02 13:54:01,327 | INFO     | all data control threads have been joined
[2026-03-02 14:54:55] 2026-03-02 13:54:01,471 | INFO     | all job control threads have been joined
[2026-03-02 14:54:55] 2026-03-02 13:54:01,735 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-02 14:54:55] 2026-03-02 13:54:02,023 | INFO     | [job] retrieve thread has finished
[2026-03-02 14:54:55] 2026-03-02 13:54:02,047 | INFO     | [job] validate thread has finished
[2026-03-02 14:54:55] 2026-03-02 13:54:02,176 | INFO     | all payload control threads have been joined
[2026-03-02 14:54:55] 2026-03-02 13:54:02,196 | INFO     | [job] job monitor thread has finished
[2026-03-02 14:54:55] 2026-03-02 13:54:02,332 | INFO     | [data] control thread has finished
[2026-03-02 14:54:55] 2026-03-02 13:54:02,333 | INFO     | [job] create_data_payload thread has finished
[2026-03-02 14:54:55] 2026-03-02 13:54:02,405 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-02 14:54:55] 2026-03-02 13:54:02,451 | INFO     | [data] copytool_in thread has finished
[2026-03-02 14:54:55] 2026-03-02 13:54:02,475 | INFO     | [job] control thread has finished
[2026-03-02 14:54:55] 2026-03-02 13:54:02,566 | INFO     | [payload] validate_pre thread has finished
[2026-03-02 14:54:55] 2026-03-02 13:54:02,617 | INFO     | [payload] execute_payloads thread has finished
[2026-03-02 14:54:55] 2026-03-02 13:54:02,748 | INFO     | [payload] failed_post thread has finished
[2026-03-02 14:54:55] 2026-03-02 13:54:03,181 | INFO     | [payload] control thread has finished
[2026-03-02 14:54:55] 2026-03-02 13:54:03,386 | INFO     | [payload] validate_post thread has finished
[2026-03-02 14:54:55] 2026-03-02 13:54:03,656 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-02 14:54:55] 2026-03-02 13:54:03,740 | INFO     | [data] copytool_out thread has finished
[2026-03-02 14:54:55] 2026-03-02 13:54:04,661 | INFO     | [job] queue monitor thread has finished
[2026-03-02 14:54:55] 2026-03-02 13:54:06,410 | INFO     | [data] queue_monitor thread has finished
[2026-03-02 14:54:55] 2026-03-02 13:54:11,359 | INFO     | job.realtimelogging is not enabled
[2026-03-02 14:54:55] 2026-03-02 13:54:12,364 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-02 14:54:55] 2026-03-02 13:54:30,325 | INFO     | PID=48718 has CPU usage=8.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-02 14:54:55] 2026-03-02 13:54:30,325 | INFO     | .. there are 12 such processes running
[2026-03-02 14:54:55] 2026-03-02 13:54:30,325 | INFO     | found 0 job(s) in 20 queues
[2026-03-02 14:54:55] 2026-03-02 13:54:30,325 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-02 14:54:55] 2026-03-02 13:54:30,325 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-02 14:54:55] 2026-03-02 13:54:49,700 | INFO     | [monitor] cgroup control has ended
[2026-03-02 14:54:55] 2026-03-02 13:54:50,001 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22775957460800)>', '<ExcThread(monitor, started 22775709558528)>']
[2026-03-02 14:54:55] 2026-03-02 13:54:50,425 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-02 14:54:55] 2026-03-02 13:54:50,426 | INFO     | [monitor] control thread has ended
[2026-03-02 14:54:55] 2026-03-02 13:54:55,026 | INFO     | all workflow threads have been joined
[2026-03-02 14:54:55] 2026-03-02 13:54:55,027 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-02 14:54:55] 2026-03-02 13:54:55,027 | INFO     | traces error code: 0
[2026-03-02 14:54:55] 2026-03-02 13:54:55,027 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-02 14:54:55] 2026-03-02 13:54:55,170 [wrapper] ==== pilot stdout END ====
[2026-03-02 14:54:55] 2026-03-02 13:54:55,173 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-02 14:54:55] 2026-03-02 13:54:55,176 [wrapper] pilotpid: 48718
[2026-03-02 14:54:55] 2026-03-02 13:54:55,178 [wrapper] Pilot exit status: 0
[2026-03-02 14:54:55] 2026-03-02 13:54:55,190 [wrapper] pandaids: 7035116404
[2026-03-02 14:54:55] 2026-03-02 13:54:55,270 [wrapper] cleanup supervisor_pilot  261389 48719
[2026-03-02 14:54:55] 2026-03-02 13:54:55,273 [wrapper] Test setup, not cleaning
[2026-03-02 14:54:55] 2026-03-02 13:54:55,276 [wrapper] apfmon messages muted
[2026-03-02 14:54:55] 2026-03-02 13:54:55,279 [wrapper] ==== wrapper stdout END ====
[2026-03-02 14:54:55] 2026-03-02 13:54:55,281 [wrapper] ==== wrapper stderr END ====
[2026-03-02 14:54:55]  *** Error codes and diagnostics ***
[2026-03-02 14:54:55]     "exeErrorCode": 0,
[2026-03-02 14:54:55]     "exeErrorDiag": "",
[2026-03-02 14:54:55]     "pilotErrorCode": 0,
[2026-03-02 14:54:55]     "pilotErrorDiag": "",
[2026-03-02 14:54:55]  *** Listing of results directory ***
[2026-03-02 14:54:55] total 514672
[2026-03-02 14:54:55] -rw-r--r-- 1 boinc boinc    584627 Mar  1 15:22 pilot3.tar.gz
[2026-03-02 14:54:55] -rw-r--r-- 1 boinc boinc      5111 Mar  1 15:23 queuedata.json
[2026-03-02 14:54:55] -rwx------ 1 boinc boinc     36322 Mar  1 15:23 runpilot2-wrapper.sh
[2026-03-02 14:54:55] -rw-r--r-- 1 boinc boinc       100 Mar  2 11:04 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-02 14:54:55] -rwxr-xr-x 1 boinc boinc      7986 Mar  2 11:04 run_atlas
[2026-03-02 14:54:55] -rw-r--r-- 1 boinc boinc       105 Mar  2 11:04 job.xml
[2026-03-02 14:54:55] -rw-r--r-- 2 boinc boinc 292249573 Mar  2 11:04 EVNT.48220085._000287.pool.root.1
[2026-03-02 14:54:55] -rw-r--r-- 1 boinc boinc      6641 Mar  2 11:04 init_data.xml
[2026-03-02 14:54:55] -rw-r--r-- 2 boinc boinc     15845 Mar  2 11:04 start_atlas.sh
[2026-03-02 14:54:55] drwxrwx--x 2 boinc boinc      4096 Mar  2 11:04 shared
[2026-03-02 14:54:55] -rw-r--r-- 2 boinc boinc    597967 Mar  2 11:04 input.tar.gz
[2026-03-02 14:54:55] -rw-r--r-- 1 boinc boinc         0 Mar  2 11:04 boinc_lockfile
[2026-03-02 14:54:55] -rw-r--r-- 1 boinc boinc      2566 Mar  2 11:04 pandaJob.out
[2026-03-02 14:54:55] -rw------- 1 boinc boinc    997501 Mar  2 11:04 agis_schedconf.cvmfs.json
[2026-03-02 14:54:55] -rw------- 1 boinc boinc       452 Mar  2 11:04 workernode_map.json
[2026-03-02 14:54:55] drwx------ 5 boinc boinc      4096 Mar  2 11:04 pilot3
[2026-03-02 14:54:55] -rw------- 1 boinc boinc 226196582 Mar  2 14:53 HITS.48838416._009349.pool.root.1
[2026-03-02 14:54:55] -rw-r--r-- 1 boinc boinc       530 Mar  2 14:53 boinc_task_state.xml
[2026-03-02 14:54:55] -rw------- 1 boinc boinc        95 Mar  2 14:53 pilot_heartbeat.json
[2026-03-02 14:54:55] -rw------- 1 boinc boinc      1034 Mar  2 14:53 memory_monitor_summary.json
[2026-03-02 14:54:55] -rw------- 1 boinc boinc   1512931 Mar  2 14:53 agis_ddmendpoints.agis.ALL.json
[2026-03-02 14:54:55] -rw------- 1 boinc boinc    385419 Mar  2 14:53 log.48838416._009349.job.log.tgz.1
[2026-03-02 14:54:55] -rw------- 1 boinc boinc      6397 Mar  2 14:53 heartbeat.json
[2026-03-02 14:54:55] -rw-r--r-- 1 boinc boinc        27 Mar  2 14:54 wrapper_checkpoint.txt
[2026-03-02 14:54:55] -rw-r--r-- 1 boinc boinc      8192 Mar  2 14:54 boinc_mmap_file
[2026-03-02 14:54:55] -rw------- 1 boinc boinc      6326 Mar  2 14:54 pilotlog.txt
[2026-03-02 14:54:55] -rw------- 1 boinc boinc   1937965 Mar  2 14:54 log.48838416._009349.job.log.1
[2026-03-02 14:54:55] -rw------- 1 boinc boinc       357 Mar  2 14:54 output.list
[2026-03-02 14:54:55] -rw-r--r-- 1 boinc boinc       620 Mar  2 14:54 runtime_log
[2026-03-02 14:54:55] -rw------- 1 boinc boinc   2344960 Mar  2 14:54 result.tar.gz
[2026-03-02 14:54:55] -rw-r--r-- 1 boinc boinc      9205 Mar  2 14:54 runtime_log.err
[2026-03-02 14:54:55] -rw------- 1 boinc boinc       665 Mar  2 14:54 XOILDmZswG9n9Rq4apOajLDm4fhM0noT9bVooX4SDmPm8KDmaNaFNn.diag
[2026-03-02 14:54:55] -rw-r--r-- 1 boinc boinc     21158 Mar  2 14:54 stderr.txt
[2026-03-02 14:54:55] HITS file was successfully produced:
[2026-03-02 14:54:55] -rw------- 1 boinc boinc 226196582 Mar  2 14:53 shared/HITS.pool.root.1
[2026-03-02 14:54:55]  *** Contents of shared directory: ***
[2026-03-02 14:54:55] total 509192
[2026-03-02 14:54:55] -rw-r--r-- 2 boinc boinc 292249573 Mar  2 11:04 ATLAS.root_0
[2026-03-02 14:54:55] -rw-r--r-- 2 boinc boinc     15845 Mar  2 11:04 start_atlas.sh
[2026-03-02 14:54:55] -rw-r--r-- 2 boinc boinc    597967 Mar  2 11:04 input.tar.gz
[2026-03-02 14:54:55] -rw------- 1 boinc boinc 226196582 Mar  2 14:53 HITS.pool.root.1
[2026-03-02 14:54:55] -rw------- 1 boinc boinc   2344960 Mar  2 14:54 result.tar.gz
14:54:56 (44636): run_atlas exited; CPU time 52804.631316
14:54:56 (44636): called boinc_finish(0)

</stderr_txt>
]]>

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