Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
06:41:09 (80673): wrapper (7.7.26015): starting
06:41:09 (80673): wrapper: running run_atlas (--nthreads 4)
[2026-03-02 06:41:09] Arguments: --nthreads 4
[2026-03-02 06:41:09] Threads: 4
[2026-03-02 06:41:09] Checking for CVMFS
[2026-03-02 06:41:09] No cvmfs_config command found, will try listing directly
[2026-03-02 06:41:09] CVMFS is ok
[2026-03-02 06:41:09] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-02 06:41:09] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-02 06:41:09] Further information can be found at the LHC@home message board.
[2026-03-02 06:41:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-02 06:41:09] Checking for apptainer binary...
[2026-03-02 06:41:09] which: no apptainer in ((null))
[2026-03-02 06:41:09] apptainer is not installed, using version from CVMFS
[2026-03-02 06:41:09] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-02 06:41:09] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot116/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut22.grid.cesnet.cz
[2026-03-02 06:41:09] apptainer works
[2026-03-02 06:41:09] Set ATHENA_PROC_NUMBER=4
[2026-03-02 06:41:09] Set ATHENA_CORE_NUMBER=4
[2026-03-02 06:41:09] Starting ATLAS job with PandaID=7034442902
[2026-03-02 06:41:09] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot116/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-02 08:25:53]  *** The last 200 lines of the pilot log: ***
[2026-03-02 08:25:53] 2026-03-02 07:25:20,410 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_16236/.job.ad'
[2026-03-02 08:25:53] 2026-03-02 07:25:20,410 | INFO     | total number of processed events: 400 (read)
[2026-03-02 08:25:53] 2026-03-02 07:25:20,428 | INFO     | using path: /var/lib/boinc/var/slot116/slots/0/PanDA_Pilot-7034442902/memory_monitor_summary.json (trf name=prmon)
[2026-03-02 08:25:53] 2026-03-02 07:25:20,429 | INFO     | extracted standard info from prmon json
[2026-03-02 08:25:53] 2026-03-02 07:25:20,429 | INFO     | extracted standard memory fields from prmon json
[2026-03-02 08:25:53] 2026-03-02 07:25:20,429 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-02 08:25:53] 2026-03-02 07:25:20,429 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-02 08:25:53] 2026-03-02 07:25:20,429 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-02 08:25:53] 2026-03-02 07:25:20,430 | INFO     | fitting pss+swap vs Time
[2026-03-02 08:25:53] 2026-03-02 07:25:20,430 | INFO     | sum of square deviations: 329031285.5
[2026-03-02 08:25:53] 2026-03-02 07:25:20,431 | INFO     | sum of deviations: 9914372974.5
[2026-03-02 08:25:53] 2026-03-02 07:25:20,431 | INFO     | mean x: 1772433184.5
[2026-03-02 08:25:53] 2026-03-02 07:25:20,431 | INFO     | mean y: 2321327.4803921566
[2026-03-02 08:25:53] 2026-03-02 07:25:20,431 | INFO     | intersect: -53404647668.827324
[2026-03-02 08:25:53] 2026-03-02 07:25:20,431 | INFO     | chi2: 1.0898399998577408
[2026-03-02 08:25:53] 2026-03-02 07:25:20,431 | INFO     | sum of square deviations: 282974608.0
[2026-03-02 08:25:53] 2026-03-02 07:25:20,431 | INFO     | sum of deviations: 9416087856.000002
[2026-03-02 08:25:53] 2026-03-02 07:25:20,431 | INFO     | mean x: 1772433032.0
[2026-03-02 08:25:53] 2026-03-02 07:25:20,431 | INFO     | mean y: 2319676.216494845
[2026-03-02 08:25:53] 2026-03-02 07:25:20,431 | INFO     | intersect: -58976064519.260376
[2026-03-02 08:25:53] 2026-03-02 07:25:20,432 | INFO     | chi2: 1.0916160852325796
[2026-03-02 08:25:53] 2026-03-02 07:25:20,432 | INFO     | current chi2=1.0916160852325796 (change=-0.1629675342316845 %)
[2026-03-02 08:25:53] 2026-03-02 07:25:20,432 | INFO     | right removable region: 96
[2026-03-02 08:25:53] 2026-03-02 07:25:20,432 | INFO     | sum of square deviations: 282974608.0
[2026-03-02 08:25:53] 2026-03-02 07:25:20,432 | INFO     | sum of deviations: 21716609.999999955
[2026-03-02 08:25:53] 2026-03-02 07:25:20,433 | INFO     | mean x: 1772433337.0
[2026-03-02 08:25:53] 2026-03-02 07:25:20,433 | INFO     | mean y: 2353071.9175257734
[2026-03-02 08:25:53] 2026-03-02 07:25:20,433 | INFO     | intersect: -133670593.96074799
[2026-03-02 08:25:53] 2026-03-02 07:25:20,433 | INFO     | chi2: 0.0004041372721045619
[2026-03-02 08:25:53] 2026-03-02 07:25:20,433 | INFO     | current chi2=0.0004041372721045619 (change=99.9629177427735 %)
[2026-03-02 08:25:53] 2026-03-02 07:25:20,433 | INFO     | sum of square deviations: 241429643.0
[2026-03-02 08:25:53] 2026-03-02 07:25:20,433 | INFO     | sum of deviations: -197794817.99999997
[2026-03-02 08:25:53] 2026-03-02 07:25:20,433 | INFO     | mean x: 1772433489.5
[2026-03-02 08:25:53] 2026-03-02 07:25:20,433 | INFO     | mean y: 2353868.695652174
[2026-03-02 08:25:53] 2026-03-02 07:25:20,433 | INFO     | intersect: 1454446309.0293248
[2026-03-02 08:25:53] 2026-03-02 07:25:20,433 | INFO     | chi2: 0.00013590144426542302
[2026-03-02 08:25:53] 2026-03-02 07:25:20,433 | INFO     | current chi2=0.00013590144426542302 (change=66.37245469646724 %)
[2026-03-02 08:25:53] 2026-03-02 07:25:20,433 | INFO     | sum of square deviations: 204163828.0
[2026-03-02 08:25:53] 2026-03-02 07:25:20,434 | INFO     | sum of deviations: -157948154.0
[2026-03-02 08:25:53] 2026-03-02 07:25:20,434 | INFO     | mean x: 1772433642.0
[2026-03-02 08:25:53] 2026-03-02 07:25:20,434 | INFO     | mean y: 2353704.3103448274
[2026-03-02 08:25:53] 2026-03-02 07:25:20,434 | INFO     | intersect: 1373569284.3855622
[2026-03-02 08:25:53] 2026-03-02 07:25:20,434 | INFO     | chi2: 0.00013478919173132744
[2026-03-02 08:25:53] 2026-03-02 07:25:20,434 | INFO     | current chi2=0.00013478919173132744 (change=0.818425838008966 %)
[2026-03-02 08:25:53] 2026-03-02 07:25:20,434 | INFO     | left removable region: 30
[2026-03-02 08:25:53] 2026-03-02 07:25:20,434 | INFO     | sum of square deviations: 89127252.5
[2026-03-02 08:25:53] 2026-03-02 07:25:20,434 | INFO     | sum of deviations: 29177306.500000004
[2026-03-02 08:25:53] 2026-03-02 07:25:20,434 | INFO     | mean x: 1772433916.5
[2026-03-02 08:25:53] 2026-03-02 07:25:20,434 | INFO     | mean y: 2352599.1666666665
[2026-03-02 08:25:53] 2026-03-02 07:25:20,434 | INFO     | intersect: -577883481.0683424
[2026-03-02 08:25:53] 2026-03-02 07:25:20,434 | INFO     | chi2: 6.282403921497614e-05
[2026-03-02 08:25:53] 2026-03-02 07:25:20,434 | INFO     | current memory leak: 0.33 B/s (using 66 data points, chi2=0.00)
[2026-03-02 08:25:53] 2026-03-02 07:25:20,435 | INFO     | could have reported an average CPU frequency of 3579 MHz (7 samples)
[2026-03-02 08:25:53] 2026-03-02 07:25:20,435 | INFO     | ..............................
[2026-03-02 08:25:53] 2026-03-02 07:25:20,435 | INFO     | . Timing measurements:
[2026-03-02 08:25:53] 2026-03-02 07:25:20,435 | INFO     | . get job = 0 s
[2026-03-02 08:25:53] 2026-03-02 07:25:20,435 | INFO     | . initial setup = 5 s
[2026-03-02 08:25:53] 2026-03-02 07:25:20,435 | INFO     | . payload setup = 5 s
[2026-03-02 08:25:53] 2026-03-02 07:25:20,435 | INFO     | . stage-in = 0 s
[2026-03-02 08:25:53] 2026-03-02 07:25:20,435 | INFO     | . payload execution = 6214 s
[2026-03-02 08:25:53] 2026-03-02 07:25:20,435 | INFO     | . stage-out = 0 s
[2026-03-02 08:25:53] 2026-03-02 07:25:20,435 | INFO     | . log creation = 0 s
[2026-03-02 08:25:53] 2026-03-02 07:25:20,435 | INFO     | ..............................
[2026-03-02 08:25:53] 2026-03-02 07:25:20,487 | INFO     | 
[2026-03-02 08:25:53] 2026-03-02 07:25:20,488 | INFO     | job summary report
[2026-03-02 08:25:53] 2026-03-02 07:25:20,488 | INFO     | --------------------------------------------------
[2026-03-02 08:25:53] 2026-03-02 07:25:20,488 | INFO     | PanDA job id: 7034442902
[2026-03-02 08:25:53] 2026-03-02 07:25:20,488 | INFO     | task id: 48838521
[2026-03-02 08:25:53] 2026-03-02 07:25:20,488 | INFO     | errors: (none)
[2026-03-02 08:25:53] 2026-03-02 07:25:20,488 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-02 08:25:53] 2026-03-02 07:25:20,488 | INFO     | pilot state: finished 
[2026-03-02 08:25:53] 2026-03-02 07:25:20,488 | INFO     | transexitcode: 0
[2026-03-02 08:25:53] 2026-03-02 07:25:20,488 | INFO     | exeerrorcode: 0
[2026-03-02 08:25:53] 2026-03-02 07:25:20,488 | INFO     | exeerrordiag: 
[2026-03-02 08:25:53] 2026-03-02 07:25:20,488 | INFO     | exitcode: 0
[2026-03-02 08:25:53] 2026-03-02 07:25:20,488 | INFO     | exitmsg: OK
[2026-03-02 08:25:53] 2026-03-02 07:25:20,488 | INFO     | cpuconsumptiontime: 23805 s
[2026-03-02 08:25:53] 2026-03-02 07:25:20,488 | INFO     | nevents: 400
[2026-03-02 08:25:53] 2026-03-02 07:25:20,488 | INFO     | neventsw: 0
[2026-03-02 08:25:53] 2026-03-02 07:25:20,488 | INFO     | pid: 91193
[2026-03-02 08:25:53] 2026-03-02 07:25:20,488 | INFO     | pgrp: 91193
[2026-03-02 08:25:53] 2026-03-02 07:25:20,488 | INFO     | corecount: 4
[2026-03-02 08:25:53] 2026-03-02 07:25:20,488 | INFO     | event service: False
[2026-03-02 08:25:53] 2026-03-02 07:25:20,488 | INFO     | sizes: {0: 2282286, 11: 2282286, 6223: 2309237, 6224: 2318415, 6225: 2318471, 6226: 2318665}
[2026-03-02 08:25:53] 2026-03-02 07:25:20,488 | INFO     | --------------------------------------------------
[2026-03-02 08:25:53] 2026-03-02 07:25:20,488 | INFO     | 
[2026-03-02 08:25:53] 2026-03-02 07:25:20,489 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot116/slots/0
[2026-03-02 08:25:53] 2026-03-02 07:25:20,543 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-02 08:25:53] 2026-03-02 07:25:20,544 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-02 08:25:53] 2026-03-02 07:25:20,544 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-02 08:25:53] 2026-03-02 07:25:20,544 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-02 08:25:53] 2026-03-02 07:25:20,544 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-02 08:25:53] 2026-03-02 07:25:20,544 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-02 08:25:53] 2026-03-02 07:25:20,544 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-02 08:25:53] 2026-03-02 07:25:20,544 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-02 08:25:53] 2026-03-02 07:25:20,544 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-02 08:25:53] 2026-03-02 07:25:20,544 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-02 08:25:53] 2026-03-02 07:25:20,544 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-02 08:25:53] 2026-03-02 07:25:20,544 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-02 08:25:53] 2026-03-02 07:25:20,544 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-02 08:25:53] 2026-03-02 07:25:20,544 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-02 08:25:53] 2026-03-02 07:25:20,544 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-02 08:25:53] 2026-03-02 07:25:20,544 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-02 08:25:53] 2026-03-02 07:25:20,544 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-02 08:25:53] 2026-03-02 07:25:20,544 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-02 08:25:53] 2026-03-02 07:25:20,544 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-02 08:25:53] 2026-03-02 07:25:20,544 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-02 08:25:53] 2026-03-02 07:25:20,544 | INFO     | job 7034442902 has completed (purged errors)
[2026-03-02 08:25:53] 2026-03-02 07:25:20,544 | INFO     | overall cleanup function is called
[2026-03-02 08:25:53] 2026-03-02 07:25:21,550 | INFO     | --- collectZombieJob: --- 10, [91193]
[2026-03-02 08:25:53] 2026-03-02 07:25:21,551 | INFO     | zombie collector waiting for pid 91193
[2026-03-02 08:25:53] 2026-03-02 07:25:21,551 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-02 08:25:53] 2026-03-02 07:25:21,551 | INFO     | collected zombie processes
[2026-03-02 08:25:53] 2026-03-02 07:25:21,551 | INFO     | will attempt to kill all subprocesses of pid=91193
[2026-03-02 08:25:53] 2026-03-02 07:25:22,175 | INFO     | process IDs to be killed: [91193] (in reverse order)
[2026-03-02 08:25:53] 2026-03-02 07:25:22,454 | WARNING  | found no corresponding commands to process id(s)
[2026-03-02 08:25:53] 2026-03-02 07:25:22,454 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-02 08:25:53] 2026-03-02 07:25:22,486 | INFO     | did not find any defunct processes belonging to 91193
[2026-03-02 08:25:53] 2026-03-02 07:25:22,516 | INFO     | did not find any defunct processes belonging to 91193
[2026-03-02 08:25:53] 2026-03-02 07:25:22,516 | INFO     | ready for new job
[2026-03-02 08:25:53] 2026-03-02 07:25:22,516 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-02 08:25:53] 2026-03-02 07:25:22,517 | INFO     | **************************************
[2026-03-02 08:25:53] 2026-03-02 07:25:22,517 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-02 08:25:53] 2026-03-02 07:25:22,517 | INFO     | **************************************
[2026-03-02 08:25:53] 2026-03-02 07:25:22,517 | INFO     | 
[2026-03-02 08:25:53] 2026-03-02 07:25:22,524 | INFO     | architecture information:
[2026-03-02 08:25:53] 2026-03-02 07:25:22,524 | INFO     | executing command: cat /etc/os-release
[2026-03-02 08:25:53] 2026-03-02 07:25:22,541 | INFO     | cat /etc/os-release:
[2026-03-02 08:25:53] NAME="CentOS Linux"
[2026-03-02 08:25:53] VERSION="7 (Core)"
[2026-03-02 08:25:53] ID="centos"
[2026-03-02 08:25:53] ID_LIKE="rhel fedora"
[2026-03-02 08:25:53] VERSION_ID="7"
[2026-03-02 08:25:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-02 08:25:53] ANSI_COLOR="0;31"
[2026-03-02 08:25:53] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-02 08:25:53] HOME_URL="https://www.centos.org/"
[2026-03-02 08:25:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-02 08:25:53] 
[2026-03-02 08:25:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-02 08:25:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-02 08:25:53] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-02 08:25:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-02 08:25:53] 
[2026-03-02 08:25:53] 2026-03-02 07:25:22,541 | INFO     | **************************************
[2026-03-02 08:25:53] 2026-03-02 07:25:23,043 | INFO     | executing command: df -mP /var/lib/boinc/var/slot116/slots/0
[2026-03-02 08:25:53] 2026-03-02 07:25:23,056 | INFO     | sufficient remaining disk space (20609761280 B)
[2026-03-02 08:25:53] 2026-03-02 07:25:23,057 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-02 08:25:53] 2026-03-02 07:25:23,057 | INFO     | current server update state: UPDATING_FINAL
[2026-03-02 08:25:53] 2026-03-02 07:25:23,057 | INFO     | update_server=False
[2026-03-02 08:25:53] 2026-03-02 07:25:23,057 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-02 08:25:53] 2026-03-02 07:25:23,098 | INFO     | all data control threads have been joined
[2026-03-02 08:25:53] 2026-03-02 07:25:23,335 | INFO     | all job control threads have been joined
[2026-03-02 08:25:53] 2026-03-02 07:25:23,916 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-02 08:25:53] 2026-03-02 07:25:23,916 | INFO     | aborting loop
[2026-03-02 08:25:53] 2026-03-02 07:25:24,062 | INFO     | [job] retrieve thread has finished
[2026-03-02 08:25:53] 2026-03-02 07:25:24,103 | INFO     | [data] control thread has finished
[2026-03-02 08:25:53] 2026-03-02 07:25:24,128 | INFO     | [job] validate thread has finished
[2026-03-02 08:25:53] 2026-03-02 07:25:24,272 | INFO     | [data] copytool_in thread has finished
[2026-03-02 08:25:53] 2026-03-02 07:25:24,284 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-02 08:25:53] 2026-03-02 07:25:24,334 | INFO     | all payload control threads have been joined
[2026-03-02 08:25:53] 2026-03-02 07:25:24,341 | INFO     | [job] control thread has finished
[2026-03-02 08:25:53] 2026-03-02 07:25:24,411 | INFO     | [payload] validate_post thread has finished
[2026-03-02 08:25:53] 2026-03-02 07:25:24,419 | INFO     | [payload] validate_pre thread has finished
[2026-03-02 08:25:53] 2026-03-02 07:25:24,543 | INFO     | [job] create_data_payload thread has finished
[2026-03-02 08:25:53] 2026-03-02 07:25:24,844 | INFO     | [payload] failed_post thread has finished
[2026-03-02 08:25:53] 2026-03-02 07:25:24,921 | INFO     | [job] job monitor thread has finished
[2026-03-02 08:25:53] 2026-03-02 07:25:25,339 | INFO     | [payload] control thread has finished
[2026-03-02 08:25:53] 2026-03-02 07:25:25,441 | INFO     | [payload] execute_payloads thread has finished
[2026-03-02 08:25:53] 2026-03-02 07:25:25,498 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-02 08:25:53] 2026-03-02 07:25:25,712 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-02 08:25:53] 2026-03-02 07:25:26,289 | INFO     | [data] copytool_out thread has finished
[2026-03-02 08:25:53] 2026-03-02 07:25:26,503 | INFO     | [job] queue monitor thread has finished
[2026-03-02 08:25:53] 2026-03-02 07:25:29,717 | INFO     | [data] queue_monitor thread has finished
[2026-03-02 08:25:53] 2026-03-02 07:25:32,848 | INFO     | [monitor] cgroup control has ended
[2026-03-02 08:25:53] 2026-03-02 07:25:33,752 | INFO     | job.realtimelogging is not enabled
[2026-03-02 08:25:53] 2026-03-02 07:25:34,757 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-02 08:25:53] 2026-03-02 07:25:36,533 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22962516440896)>', '<ExcThread(monitor, started 22962274309888)>']
[2026-03-02 08:25:53] 2026-03-02 07:25:41,562 | INFO     | all workflow threads have been joined
[2026-03-02 08:25:53] 2026-03-02 07:25:41,562 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-02 08:25:53] 2026-03-02 07:25:41,562 | INFO     | traces error code: 0
[2026-03-02 08:25:53] 2026-03-02 07:25:41,562 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-02 08:25:53] 2026-03-02 07:25:53,125 | INFO     | PID=85341 has CPU usage=7.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-02 08:25:53] 2026-03-02 07:25:53,125 | INFO     | .. there are 48 such processes running
[2026-03-02 08:25:53] 2026-03-02 07:25:53,125 | INFO     | found 0 job(s) in 20 queues
[2026-03-02 08:25:53] 2026-03-02 07:25:53,125 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-02 08:25:53] 2026-03-02 07:25:53,125 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-02 08:25:53] 2026-03-02 07:25:53,125 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-02 08:25:53] 2026-03-02 07:25:53,125 | CRITICAL | thread 'MainThread' is not alive
[2026-03-02 08:25:53] 2026-03-02 07:25:53,125 | INFO     | [monitor] control thread has ended
[2026-03-02 08:25:53] 2026-03-02 07:25:53,311 [wrapper] ==== pilot stdout END ====
[2026-03-02 08:25:53] 2026-03-02 07:25:53,314 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-02 08:25:53] 2026-03-02 07:25:53,318 [wrapper] pilotpid: 85341
[2026-03-02 08:25:53] 2026-03-02 07:25:53,321 [wrapper] Pilot exit status: 0
[2026-03-02 08:25:53] 2026-03-02 07:25:53,349 [wrapper] pandaids: 7034442902
[2026-03-02 08:25:53] 2026-03-02 07:25:53,508 [wrapper] cleanup supervisor_pilot  960739 85342
[2026-03-02 08:25:53] 2026-03-02 07:25:53,511 [wrapper] Test setup, not cleaning
[2026-03-02 08:25:53] 2026-03-02 07:25:53,521 [wrapper] apfmon messages muted
[2026-03-02 08:25:53] 2026-03-02 07:25:53,538 [wrapper] ==== wrapper stdout END ====
[2026-03-02 08:25:53] 2026-03-02 07:25:53,562 [wrapper] ==== wrapper stderr END ====
[2026-03-02 08:25:53]  *** Error codes and diagnostics ***
[2026-03-02 08:25:53]     "exeErrorCode": 0,
[2026-03-02 08:25:53]     "exeErrorDiag": "",
[2026-03-02 08:25:53]     "pilotErrorCode": 0,
[2026-03-02 08:25:53]     "pilotErrorDiag": "",
[2026-03-02 08:25:53]  *** Listing of results directory ***
[2026-03-02 08:25:53] total 475120
[2026-03-02 08:25:53] -rw-r--r--. 1 boinc boinc    584627 Mar  1 06:54 pilot3.tar.gz
[2026-03-02 08:25:53] -rw-r--r--. 1 boinc boinc      5111 Mar  1 06:55 queuedata.json
[2026-03-02 08:25:53] -rwx------. 1 boinc boinc     36322 Mar  1 06:55 runpilot2-wrapper.sh
[2026-03-02 08:25:53] -rw-r--r--. 1 boinc boinc       100 Mar  2 06:41 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-02 08:25:53] -rwxr-xr-x. 1 boinc boinc      7986 Mar  2 06:41 run_atlas
[2026-03-02 08:25:53] -rw-r--r--. 1 boinc boinc       105 Mar  2 06:41 job.xml
[2026-03-02 08:25:53] -rw-r--r--. 1 boinc boinc      6705 Mar  2 06:41 init_data.xml
[2026-03-02 08:25:53] -rw-r--r--. 2 boinc boinc 273992563 Mar  2 06:41 EVNT.48343683._000066.pool.root.1
[2026-03-02 08:25:53] -rw-r--r--. 2 boinc boinc     15845 Mar  2 06:41 start_atlas.sh
[2026-03-02 08:25:53] drwxrwx--x. 2 boinc boinc      4096 Mar  2 06:41 shared
[2026-03-02 08:25:53] -rw-r--r--. 2 boinc boinc    597959 Mar  2 06:41 input.tar.gz
[2026-03-02 08:25:53] -rw-r--r--. 1 boinc boinc         0 Mar  2 06:41 boinc_lockfile
[2026-03-02 08:25:53] -rw-r--r--. 1 boinc boinc      2563 Mar  2 06:41 pandaJob.out
[2026-03-02 08:25:53] -rw-------. 1 boinc boinc    998242 Mar  2 06:41 agis_schedconf.cvmfs.json
[2026-03-02 08:25:53] -rw-------. 1 boinc boinc   1513015 Mar  2 06:41 agis_ddmendpoints.agis.ALL.json
[2026-03-02 08:25:53] -rw-------. 1 boinc boinc       445 Mar  2 06:41 workernode_map.json
[2026-03-02 08:25:53] drwx------. 5 boinc boinc      4096 Mar  2 06:41 pilot3
[2026-03-02 08:25:53] -rw-------. 1 boinc boinc 206244393 Mar  2 08:24 HITS.48838521._001624.pool.root.1
[2026-03-02 08:25:53] -rw-r--r--. 1 boinc boinc       529 Mar  2 08:24 boinc_task_state.xml
[2026-03-02 08:25:53] -rw-------. 1 boinc boinc        95 Mar  2 08:25 pilot_heartbeat.json
[2026-03-02 08:25:53] -rw-------. 1 boinc boinc      1031 Mar  2 08:25 memory_monitor_summary.json
[2026-03-02 08:25:53] -rw-------. 1 boinc boinc    279447 Mar  2 08:25 log.48838521._001624.job.log.tgz.1
[2026-03-02 08:25:53] -rw-------. 1 boinc boinc      6347 Mar  2 08:25 heartbeat.json
[2026-03-02 08:25:53] -rw-r--r--. 1 boinc boinc      8192 Mar  2 08:25 boinc_mmap_file
[2026-03-02 08:25:53] -rw-r--r--. 1 boinc boinc        27 Mar  2 08:25 wrapper_checkpoint.txt
[2026-03-02 08:25:53] -rw-------. 1 boinc boinc       891 Mar  2 08:25 pilotlog.txt
[2026-03-02 08:25:53] -rw-------. 1 boinc boinc    897307 Mar  2 08:25 log.48838521._001624.job.log.1
[2026-03-02 08:25:53] -rw-------. 1 boinc boinc       357 Mar  2 08:25 output.list
[2026-03-02 08:25:53] -rw-r--r--. 1 boinc boinc       620 Mar  2 08:25 runtime_log
[2026-03-02 08:25:53] -rw-------. 1 boinc boinc   1198080 Mar  2 08:25 result.tar.gz
[2026-03-02 08:25:53] -rw-r--r--. 1 boinc boinc      9221 Mar  2 08:25 runtime_log.err
[2026-03-02 08:25:53] -rw-------. 1 boinc boinc       663 Mar  2 08:25 RouMDmPxoG9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDm518KDmzX0vHo.diag
[2026-03-02 08:25:53] -rw-r--r--. 1 boinc boinc     20847 Mar  2 08:25 stderr.txt
[2026-03-02 08:25:53] HITS file was successfully produced:
[2026-03-02 08:25:53] -rw-------. 1 boinc boinc 206244393 Mar  2 08:24 shared/HITS.pool.root.1
[2026-03-02 08:25:53]  *** Contents of shared directory: ***
[2026-03-02 08:25:53] total 470764
[2026-03-02 08:25:53] -rw-r--r--. 2 boinc boinc 273992563 Mar  2 06:41 ATLAS.root_0
[2026-03-02 08:25:53] -rw-r--r--. 2 boinc boinc     15845 Mar  2 06:41 start_atlas.sh
[2026-03-02 08:25:53] -rw-r--r--. 2 boinc boinc    597959 Mar  2 06:41 input.tar.gz
[2026-03-02 08:25:53] -rw-------. 1 boinc boinc 206244393 Mar  2 08:24 HITS.pool.root.1
[2026-03-02 08:25:53] -rw-------. 1 boinc boinc   1198080 Mar  2 08:25 result.tar.gz
08:25:54 (80673): run_atlas exited; CPU time 24103.449620
08:25:54 (80673): called boinc_finish(0)

</stderr_txt>
]]>

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