Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
10:15:58 (2084877): wrapper (7.7.26015): starting
10:15:58 (2084877): wrapper: running run_atlas (--nthreads 4)
[2026-03-02 10:15:58] Arguments: --nthreads 4
[2026-03-02 10:15:58] Threads: 4
[2026-03-02 10:15:58] Checking for CVMFS
[2026-03-02 10:15:58] No cvmfs_config command found, will try listing directly
[2026-03-02 10:15:58] CVMFS is ok
[2026-03-02 10:15:58] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-02 10:15:58] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-02 10:15:58] Further information can be found at the LHC@home message board.
[2026-03-02 10:15:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-02 10:15:58] Checking for apptainer binary...
[2026-03-02 10:15:58] which: no apptainer in ((null))
[2026-03-02 10:15:58] apptainer is not installed, using version from CVMFS
[2026-03-02 10:15:58] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-02 10:15:58] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot96/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut23.grid.cesnet.cz
[2026-03-02 10:15:58] apptainer works
[2026-03-02 10:15:58] Set ATHENA_PROC_NUMBER=4
[2026-03-02 10:15:58] Set ATHENA_CORE_NUMBER=4
[2026-03-02 10:15:58] Starting ATLAS job with PandaID=7035116415
[2026-03-02 10:15:58] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot96/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-02 12:01:30]  *** The last 200 lines of the pilot log: ***
[2026-03-02 12:01:30] 2026-03-02 11:00:39,834 | INFO     | using path: /var/lib/boinc/var/slot96/slots/0/PanDA_Pilot-7035116415/memory_monitor_summary.json (trf name=prmon)
[2026-03-02 12:01:30] 2026-03-02 11:00:39,835 | INFO     | extracted standard info from prmon json
[2026-03-02 12:01:30] 2026-03-02 11:00:39,835 | INFO     | extracted standard memory fields from prmon json
[2026-03-02 12:01:30] 2026-03-02 11:00:39,835 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-02 12:01:30] 2026-03-02 11:00:39,835 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-02 12:01:30] 2026-03-02 11:00:39,835 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-02 12:01:30] 2026-03-02 11:00:39,836 | INFO     | fitting pss+swap vs Time
[2026-03-02 12:01:30] 2026-03-02 11:00:39,837 | INFO     | sum of square deviations: 338804492.0
[2026-03-02 12:01:30] 2026-03-02 11:00:39,837 | INFO     | sum of deviations: -2860221436.000001
[2026-03-02 12:01:30] 2026-03-02 11:00:39,837 | INFO     | mean x: 1772446105.0
[2026-03-02 12:01:30] 2026-03-02 11:00:39,837 | INFO     | mean y: 2337560.4077669904
[2026-03-02 12:01:30] 2026-03-02 11:00:39,837 | INFO     | intersect: 14965505001.752401
[2026-03-02 12:01:30] 2026-03-02 11:00:39,837 | INFO     | chi2: 1.9487307500989142
[2026-03-02 12:01:30] 2026-03-02 11:00:39,837 | INFO     | sum of square deviations: 291817564.5
[2026-03-02 12:01:30] 2026-03-02 11:00:39,837 | INFO     | sum of deviations: 3729414035.0000005
[2026-03-02 12:01:30] 2026-03-02 11:00:39,837 | INFO     | mean x: 1772445952.5
[2026-03-02 12:01:30] 2026-03-02 11:00:39,838 | INFO     | mean y: 2358110.3673469387
[2026-03-02 12:01:30] 2026-03-02 11:00:39,838 | INFO     | intersect: -22649413460.882416
[2026-03-02 12:01:30] 2026-03-02 11:00:39,838 | INFO     | chi2: 1.1300535947872163
[2026-03-02 12:01:30] 2026-03-02 11:00:39,838 | INFO     | current chi2=1.1300535947872163 (change=42.01078857457056 %)
[2026-03-02 12:01:30] 2026-03-02 11:00:39,838 | INFO     | sum of square deviations: 249388862.0
[2026-03-02 12:01:30] 2026-03-02 11:00:39,838 | INFO     | sum of deviations: 3613263508.0
[2026-03-02 12:01:30] 2026-03-02 11:00:39,838 | INFO     | mean x: 1772445800.0
[2026-03-02 12:01:30] 2026-03-02 11:00:39,838 | INFO     | mean y: 2357692.5483870967
[2026-03-02 12:01:30] 2026-03-02 11:00:39,838 | INFO     | intersect: -25677673394.998203
[2026-03-02 12:01:30] 2026-03-02 11:00:39,838 | INFO     | chi2: 1.1321840690837621
[2026-03-02 12:01:30] 2026-03-02 11:00:39,838 | INFO     | current chi2=1.1321840690837621 (change=-0.18852860664072657 %)
[2026-03-02 12:01:30] 2026-03-02 11:00:39,838 | INFO     | right removable region: 92
[2026-03-02 12:01:30] 2026-03-02 11:00:39,838 | INFO     | sum of square deviations: 291817564.5
[2026-03-02 12:01:30] 2026-03-02 11:00:39,839 | INFO     | sum of deviations: -11062500548.0
[2026-03-02 12:01:30] 2026-03-02 11:00:39,839 | INFO     | mean x: 1772446257.5
[2026-03-02 12:01:30] 2026-03-02 11:00:39,839 | INFO     | mean y: 2363101.0
[2026-03-02 12:01:30] 2026-03-02 11:00:39,839 | INFO     | intersect: 67193958399.55613
[2026-03-02 12:01:30] 2026-03-02 11:00:39,839 | INFO     | chi2: 0.8869982851353655
[2026-03-02 12:01:30] 2026-03-02 11:00:39,839 | INFO     | current chi2=0.8869982851353655 (change=54.483281741700694 %)
[2026-03-02 12:01:30] 2026-03-02 11:00:39,839 | INFO     | sum of square deviations: 249388862.0
[2026-03-02 12:01:30] 2026-03-02 11:00:39,839 | INFO     | sum of deviations: -8036712423.999998
[2026-03-02 12:01:30] 2026-03-02 11:00:39,839 | INFO     | mean x: 1772446410.0
[2026-03-02 12:01:30] 2026-03-02 11:00:39,839 | INFO     | mean y: 2352286.430107527
[2026-03-02 12:01:30] 2026-03-02 11:00:39,839 | INFO     | intersect: 57120549024.988525
[2026-03-02 12:01:30] 2026-03-02 11:00:39,839 | INFO     | chi2: 0.8611426046982295
[2026-03-02 12:01:30] 2026-03-02 11:00:39,839 | INFO     | current chi2=0.8611426046982295 (change=2.9149639712313746 %)
[2026-03-02 12:01:30] 2026-03-02 11:00:39,839 | INFO     | left removable region: 20
[2026-03-02 12:01:30] 2026-03-02 11:00:39,839 | INFO     | sum of square deviations: 115715658.0
[2026-03-02 12:01:30] 2026-03-02 11:00:39,840 | INFO     | sum of deviations: -681049323.0
[2026-03-02 12:01:30] 2026-03-02 11:00:39,840 | INFO     | mean x: 1772446379.5
[2026-03-02 12:01:30] 2026-03-02 11:00:39,840 | INFO     | mean y: 2371445.138888889
[2026-03-02 12:01:30] 2026-03-02 11:00:39,840 | INFO     | intersect: 10434178407.791048
[2026-03-02 12:01:30] 2026-03-02 11:00:39,840 | INFO     | chi2: 0.00018496333218351332
[2026-03-02 12:01:30] 2026-03-02 11:00:39,840 | INFO     | current memory leak: -5.89 B/s (using 72 data points, chi2=0.00)
[2026-03-02 12:01:30] 2026-03-02 11:00:39,840 | INFO     | could have reported an average CPU frequency of 3568 MHz (7 samples)
[2026-03-02 12:01:30] 2026-03-02 11:00:39,840 | INFO     | ..............................
[2026-03-02 12:01:30] 2026-03-02 11:00:39,840 | INFO     | . Timing measurements:
[2026-03-02 12:01:30] 2026-03-02 11:00:39,840 | INFO     | . get job = 0 s
[2026-03-02 12:01:30] 2026-03-02 11:00:39,840 | INFO     | . initial setup = 5 s
[2026-03-02 12:01:30] 2026-03-02 11:00:39,840 | INFO     | . payload setup = 5 s
[2026-03-02 12:01:30] 2026-03-02 11:00:39,840 | INFO     | . stage-in = 0 s
[2026-03-02 12:01:30] 2026-03-02 11:00:39,840 | INFO     | . payload execution = 6244 s
[2026-03-02 12:01:30] 2026-03-02 11:00:39,840 | INFO     | . stage-out = 0 s
[2026-03-02 12:01:30] 2026-03-02 11:00:39,840 | INFO     | . log creation = 0 s
[2026-03-02 12:01:30] 2026-03-02 11:00:39,840 | INFO     | ..............................
[2026-03-02 12:01:30] 2026-03-02 11:00:39,983 | INFO     | 
[2026-03-02 12:01:30] 2026-03-02 11:00:39,984 | INFO     | job summary report
[2026-03-02 12:01:30] 2026-03-02 11:00:39,984 | INFO     | --------------------------------------------------
[2026-03-02 12:01:30] 2026-03-02 11:00:39,984 | INFO     | PanDA job id: 7035116415
[2026-03-02 12:01:30] 2026-03-02 11:00:39,984 | INFO     | task id: 48838416
[2026-03-02 12:01:30] 2026-03-02 11:00:39,984 | INFO     | errors: (none)
[2026-03-02 12:01:30] 2026-03-02 11:00:39,984 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-02 12:01:30] 2026-03-02 11:00:39,984 | INFO     | pilot state: finished 
[2026-03-02 12:01:30] 2026-03-02 11:00:39,984 | INFO     | transexitcode: 0
[2026-03-02 12:01:30] 2026-03-02 11:00:39,984 | INFO     | exeerrorcode: 0
[2026-03-02 12:01:30] 2026-03-02 11:00:39,984 | INFO     | exeerrordiag: 
[2026-03-02 12:01:30] 2026-03-02 11:00:39,984 | INFO     | exitcode: 0
[2026-03-02 12:01:30] 2026-03-02 11:00:39,984 | INFO     | exitmsg: OK
[2026-03-02 12:01:30] 2026-03-02 11:00:39,984 | INFO     | cpuconsumptiontime: 24058 s
[2026-03-02 12:01:30] 2026-03-02 11:00:39,984 | INFO     | nevents: 400
[2026-03-02 12:01:30] 2026-03-02 11:00:39,984 | INFO     | neventsw: 0
[2026-03-02 12:01:30] 2026-03-02 11:00:39,984 | INFO     | pid: 2095344
[2026-03-02 12:01:30] 2026-03-02 11:00:39,984 | INFO     | pgrp: 2095344
[2026-03-02 12:01:30] 2026-03-02 11:00:39,984 | INFO     | corecount: 4
[2026-03-02 12:01:30] 2026-03-02 11:00:39,984 | INFO     | event service: False
[2026-03-02 12:01:30] 2026-03-02 11:00:39,984 | INFO     | sizes: {0: 2282238, 11: 2282238, 6253: 2309102, 6254: 2318178, 6256: 2318316}
[2026-03-02 12:01:30] 2026-03-02 11:00:39,984 | INFO     | --------------------------------------------------
[2026-03-02 12:01:30] 2026-03-02 11:00:39,984 | INFO     | 
[2026-03-02 12:01:30] 2026-03-02 11:00:39,984 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot96/slots/0
[2026-03-02 12:01:30] 2026-03-02 11:00:40,003 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-02 12:01:30] 2026-03-02 11:00:40,003 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-02 12:01:30] 2026-03-02 11:00:40,004 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-02 12:01:30] 2026-03-02 11:00:40,004 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-02 12:01:30] 2026-03-02 11:00:40,004 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-02 12:01:30] 2026-03-02 11:00:40,004 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-02 12:01:30] 2026-03-02 11:00:40,004 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-02 12:01:30] 2026-03-02 11:00:40,004 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-02 12:01:30] 2026-03-02 11:00:40,004 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-02 12:01:30] 2026-03-02 11:00:40,004 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-02 12:01:30] 2026-03-02 11:00:40,004 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-02 12:01:30] 2026-03-02 11:00:40,004 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-02 12:01:30] 2026-03-02 11:00:40,004 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-02 12:01:30] 2026-03-02 11:00:40,004 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-02 12:01:30] 2026-03-02 11:00:40,004 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-02 12:01:30] 2026-03-02 11:00:40,004 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-02 12:01:30] 2026-03-02 11:00:40,004 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-02 12:01:30] 2026-03-02 11:00:40,004 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-02 12:01:30] 2026-03-02 11:00:40,004 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-02 12:01:30] 2026-03-02 11:00:40,004 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-02 12:01:30] 2026-03-02 11:00:40,004 | INFO     | job 7035116415 has completed (purged errors)
[2026-03-02 12:01:30] 2026-03-02 11:00:40,004 | INFO     | overall cleanup function is called
[2026-03-02 12:01:30] 2026-03-02 11:00:41,010 | INFO     | --- collectZombieJob: --- 10, [2095344]
[2026-03-02 12:01:30] 2026-03-02 11:00:41,011 | INFO     | zombie collector waiting for pid 2095344
[2026-03-02 12:01:30] 2026-03-02 11:00:41,011 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-02 12:01:30] 2026-03-02 11:00:41,011 | INFO     | collected zombie processes
[2026-03-02 12:01:30] 2026-03-02 11:00:41,011 | INFO     | will attempt to kill all subprocesses of pid=2095344
[2026-03-02 12:01:30] 2026-03-02 11:00:41,502 | INFO     | process IDs to be killed: [2095344] (in reverse order)
[2026-03-02 12:01:30] 2026-03-02 11:00:41,725 | WARNING  | found no corresponding commands to process id(s)
[2026-03-02 12:01:30] 2026-03-02 11:00:41,726 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-02 12:01:30] 2026-03-02 11:00:41,758 | INFO     | did not find any defunct processes belonging to 2095344
[2026-03-02 12:01:30] 2026-03-02 11:00:41,788 | INFO     | did not find any defunct processes belonging to 2095344
[2026-03-02 12:01:30] 2026-03-02 11:00:41,788 | INFO     | ready for new job
[2026-03-02 12:01:30] 2026-03-02 11:00:41,788 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-02 12:01:30] 2026-03-02 11:00:41,789 | INFO     | **************************************
[2026-03-02 12:01:30] 2026-03-02 11:00:41,789 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-02 12:01:30] 2026-03-02 11:00:41,789 | INFO     | **************************************
[2026-03-02 12:01:30] 2026-03-02 11:00:41,789 | INFO     | 
[2026-03-02 12:01:30] 2026-03-02 11:00:41,795 | INFO     | architecture information:
[2026-03-02 12:01:30] 2026-03-02 11:00:41,796 | INFO     | executing command: cat /etc/os-release
[2026-03-02 12:01:30] 2026-03-02 11:00:41,813 | INFO     | cat /etc/os-release:
[2026-03-02 12:01:30] NAME="CentOS Linux"
[2026-03-02 12:01:30] VERSION="7 (Core)"
[2026-03-02 12:01:30] ID="centos"
[2026-03-02 12:01:30] ID_LIKE="rhel fedora"
[2026-03-02 12:01:30] VERSION_ID="7"
[2026-03-02 12:01:30] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-02 12:01:30] ANSI_COLOR="0;31"
[2026-03-02 12:01:30] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-02 12:01:30] HOME_URL="https://www.centos.org/"
[2026-03-02 12:01:30] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-02 12:01:30] 
[2026-03-02 12:01:30] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-02 12:01:30] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-02 12:01:30] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-02 12:01:30] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-02 12:01:30] 
[2026-03-02 12:01:30] 2026-03-02 11:00:41,813 | INFO     | **************************************
[2026-03-02 12:01:30] 2026-03-02 11:00:42,316 | INFO     | executing command: df -mP /var/lib/boinc/var/slot96/slots/0
[2026-03-02 12:01:30] 2026-03-02 11:00:42,331 | INFO     | sufficient remaining disk space (20876099584 B)
[2026-03-02 12:01:30] 2026-03-02 11:00:42,332 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-02 12:01:30] 2026-03-02 11:00:42,332 | INFO     | current server update state: UPDATING_FINAL
[2026-03-02 12:01:30] 2026-03-02 11:00:42,332 | INFO     | update_server=False
[2026-03-02 12:01:30] 2026-03-02 11:00:42,332 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-02 12:01:30] 2026-03-02 11:00:42,437 | INFO     | all job control threads have been joined
[2026-03-02 12:01:30] 2026-03-02 11:00:42,566 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-02 12:01:30] 2026-03-02 11:00:42,567 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-02 12:01:30] 2026-03-02 11:00:42,567 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-02 12:01:30] 2026-03-02 11:00:42,567 | INFO     | will abort loop
[2026-03-02 12:01:30] 2026-03-02 11:00:43,331 | INFO     | all data control threads have been joined
[2026-03-02 12:01:30] 2026-03-02 11:00:43,337 | INFO     | [job] retrieve thread has finished
[2026-03-02 12:01:30] 2026-03-02 11:00:43,443 | INFO     | [job] control thread has finished
[2026-03-02 12:01:30] 2026-03-02 11:00:43,572 | INFO     | [job] job monitor thread has finished
[2026-03-02 12:01:30] 2026-03-02 11:00:43,729 | INFO     | all payload control threads have been joined
[2026-03-02 12:01:30] 2026-03-02 11:00:43,736 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-02 12:01:30] 2026-03-02 11:00:43,910 | INFO     | [payload] execute_payloads thread has finished
[2026-03-02 12:01:30] 2026-03-02 11:00:44,049 | INFO     | [job] create_data_payload thread has finished
[2026-03-02 12:01:30] 2026-03-02 11:00:44,183 | INFO     | [payload] validate_pre thread has finished
[2026-03-02 12:01:30] 2026-03-02 11:00:44,320 | INFO     | [job] validate thread has finished
[2026-03-02 12:01:30] 2026-03-02 11:00:44,337 | INFO     | [data] control thread has finished
[2026-03-02 12:01:30] 2026-03-02 11:00:44,357 | INFO     | [payload] validate_post thread has finished
[2026-03-02 12:01:30] 2026-03-02 11:00:44,613 | INFO     | [data] copytool_in thread has finished
[2026-03-02 12:01:30] 2026-03-02 11:00:44,676 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-02 12:01:30] 2026-03-02 11:00:44,735 | INFO     | [payload] control thread has finished
[2026-03-02 12:01:30] 2026-03-02 11:00:44,754 | INFO     | [payload] failed_post thread has finished
[2026-03-02 12:01:30] 2026-03-02 11:00:44,900 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-02 12:01:30] 2026-03-02 11:00:45,741 | INFO     | [data] copytool_out thread has finished
[2026-03-02 12:01:30] 2026-03-02 11:00:45,905 | INFO     | [job] queue monitor thread has finished
[2026-03-02 12:01:30] 2026-03-02 11:00:48,681 | INFO     | [data] queue_monitor thread has finished
[2026-03-02 12:01:30] 2026-03-02 11:00:53,085 | INFO     | job.realtimelogging is not enabled
[2026-03-02 12:01:30] 2026-03-02 11:00:54,090 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-02 12:01:30] 2026-03-02 11:01:06,632 [wrapper] supervise_pilot (15 min periods counter: 8)
[2026-03-02 12:01:30] 2026-03-02 11:01:12,501 | INFO     | PID=2089524 has CPU usage=6.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-02 12:01:30] 2026-03-02 11:01:12,501 | INFO     | .. there are 47 such processes running
[2026-03-02 12:01:30] 2026-03-02 11:01:12,502 | INFO     | found 0 job(s) in 20 queues
[2026-03-02 12:01:30] 2026-03-02 11:01:12,502 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-02 12:01:30] 2026-03-02 11:01:12,502 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-02 12:01:30] 2026-03-02 11:01:22,754 | INFO     | [monitor] cgroup control has ended
[2026-03-02 12:01:30] 2026-03-02 11:01:24,784 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23144077829952)>', '<ExcThread(monitor, started 23143837345536)>']
[2026-03-02 12:01:30] 2026-03-02 11:01:25,566 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-02 12:01:30] 2026-03-02 11:01:25,567 | INFO     | [monitor] control thread has ended
[2026-03-02 12:01:30] 2026-03-02 11:01:29,811 | INFO     | all workflow threads have been joined
[2026-03-02 12:01:30] 2026-03-02 11:01:29,812 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-02 12:01:30] 2026-03-02 11:01:29,812 | INFO     | traces error code: 0
[2026-03-02 12:01:30] 2026-03-02 11:01:29,812 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-02 12:01:30] 2026-03-02 11:01:30,017 [wrapper] ==== pilot stdout END ====
[2026-03-02 12:01:30] 2026-03-02 11:01:30,020 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-02 12:01:30] 2026-03-02 11:01:30,021 [wrapper] pilotpid: 2089524
[2026-03-02 12:01:30] 2026-03-02 11:01:30,023 [wrapper] Pilot exit status: 0
[2026-03-02 12:01:30] 2026-03-02 11:01:30,030 [wrapper] pandaids: 7035116415
[2026-03-02 12:01:30] 2026-03-02 11:01:30,157 [wrapper] cleanup supervisor_pilot 2987574 2089525
[2026-03-02 12:01:30] 2026-03-02 11:01:30,161 [wrapper] Test setup, not cleaning
[2026-03-02 12:01:30] 2026-03-02 11:01:30,162 [wrapper] apfmon messages muted
[2026-03-02 12:01:30] 2026-03-02 11:01:30,164 [wrapper] ==== wrapper stdout END ====
[2026-03-02 12:01:30] 2026-03-02 11:01:30,165 [wrapper] ==== wrapper stderr END ====
[2026-03-02 12:01:30]  *** Error codes and diagnostics ***
[2026-03-02 12:01:30]     "exeErrorCode": 0,
[2026-03-02 12:01:30]     "exeErrorDiag": "",
[2026-03-02 12:01:30]     "pilotErrorCode": 0,
[2026-03-02 12:01:30]     "pilotErrorDiag": "",
[2026-03-02 12:01:30]  *** Listing of results directory ***
[2026-03-02 12:01:30] total 519816
[2026-03-02 12:01:30] -rw-r--r--. 1 boinc boinc    584627 Mar  1 15:22 pilot3.tar.gz
[2026-03-02 12:01:30] -rw-r--r--. 1 boinc boinc      5111 Mar  1 15:23 queuedata.json
[2026-03-02 12:01:30] -rwx------. 1 boinc boinc     36322 Mar  1 15:23 runpilot2-wrapper.sh
[2026-03-02 12:01:30] -rw-r--r--. 1 boinc boinc       100 Mar  2 10:15 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-02 12:01:30] -rwxr-xr-x. 1 boinc boinc      7986 Mar  2 10:15 run_atlas
[2026-03-02 12:01:30] -rw-r--r--. 1 boinc boinc       105 Mar  2 10:15 job.xml
[2026-03-02 12:01:30] -rw-r--r--. 1 boinc boinc      6703 Mar  2 10:15 init_data.xml
[2026-03-02 12:01:30] -rw-r--r--. 2 boinc boinc 290894741 Mar  2 10:15 EVNT.48220085._000297.pool.root.1
[2026-03-02 12:01:30] -rw-r--r--. 2 boinc boinc     15845 Mar  2 10:15 start_atlas.sh
[2026-03-02 12:01:30] drwxrwx--x. 2 boinc boinc      4096 Mar  2 10:15 shared
[2026-03-02 12:01:30] -rw-r--r--. 2 boinc boinc    597965 Mar  2 10:15 input.tar.gz
[2026-03-02 12:01:30] -rw-r--r--. 1 boinc boinc         0 Mar  2 10:15 boinc_lockfile
[2026-03-02 12:01:30] -rw-r--r--. 1 boinc boinc      2566 Mar  2 10:15 pandaJob.out
[2026-03-02 12:01:30] -rw-------. 1 boinc boinc    997501 Mar  2 10:16 agis_schedconf.cvmfs.json
[2026-03-02 12:01:30] -rw-------. 1 boinc boinc   1513015 Mar  2 10:16 agis_ddmendpoints.agis.ALL.json
[2026-03-02 12:01:30] -rw-------. 1 boinc boinc       444 Mar  2 10:16 workernode_map.json
[2026-03-02 12:01:30] drwx------. 5 boinc boinc      4096 Mar  2 10:16 pilot3
[2026-03-02 12:01:30] -rw-------. 1 boinc boinc 235106071 Mar  2 12:00 HITS.48838416._009360.pool.root.1
[2026-03-02 12:01:30] -rw-r--r--. 1 boinc boinc       529 Mar  2 12:00 boinc_task_state.xml
[2026-03-02 12:01:30] -rw-------. 1 boinc boinc      1031 Mar  2 12:00 memory_monitor_summary.json
[2026-03-02 12:01:30] -rw-------. 1 boinc boinc    277919 Mar  2 12:00 log.48838416._009360.job.log.tgz.1
[2026-03-02 12:01:30] -rw-------. 1 boinc boinc      6351 Mar  2 12:00 heartbeat.json
[2026-03-02 12:01:30] -rw-------. 1 boinc boinc        95 Mar  2 12:01 pilot_heartbeat.json
[2026-03-02 12:01:30] -rw-r--r--. 1 boinc boinc      8192 Mar  2 12:01 boinc_mmap_file
[2026-03-02 12:01:30] -rw-r--r--. 1 boinc boinc        27 Mar  2 12:01 wrapper_checkpoint.txt
[2026-03-02 12:01:30] -rw-------. 1 boinc boinc      5087 Mar  2 12:01 pilotlog.txt
[2026-03-02 12:01:30] -rw-------. 1 boinc boinc    902797 Mar  2 12:01 log.48838416._009360.job.log.1
[2026-03-02 12:01:30] -rw-------. 1 boinc boinc       357 Mar  2 12:01 output.list
[2026-03-02 12:01:30] -rw-r--r--. 1 boinc boinc       620 Mar  2 12:01 runtime_log
[2026-03-02 12:01:30] -rw-------. 1 boinc boinc   1198080 Mar  2 12:01 result.tar.gz
[2026-03-02 12:01:30] -rw-r--r--. 1 boinc boinc      9204 Mar  2 12:01 runtime_log.err
[2026-03-02 12:01:30] -rw-------. 1 boinc boinc       662 Mar  2 12:01 HM1LDmZswG9n9Rq4apOajLDm4fhM0noT9bVooX4SDmam8KDmPYzTEn.diag
[2026-03-02 12:01:30] -rw-r--r--. 1 boinc boinc     20778 Mar  2 12:01 stderr.txt
[2026-03-02 12:01:30] HITS file was successfully produced:
[2026-03-02 12:01:30] -rw-------. 1 boinc boinc 235106071 Mar  2 12:00 shared/HITS.pool.root.1
[2026-03-02 12:01:30]  *** Contents of shared directory: ***
[2026-03-02 12:01:30] total 515456
[2026-03-02 12:01:30] -rw-r--r--. 2 boinc boinc 290894741 Mar  2 10:15 ATLAS.root_0
[2026-03-02 12:01:30] -rw-r--r--. 2 boinc boinc     15845 Mar  2 10:15 start_atlas.sh
[2026-03-02 12:01:30] -rw-r--r--. 2 boinc boinc    597965 Mar  2 10:15 input.tar.gz
[2026-03-02 12:01:30] -rw-------. 1 boinc boinc 235106071 Mar  2 12:00 HITS.pool.root.1
[2026-03-02 12:01:30] -rw-------. 1 boinc boinc   1198080 Mar  2 12:01 result.tar.gz
12:01:32 (2084877): run_atlas exited; CPU time 24333.677950
12:01:32 (2084877): called boinc_finish(0)

</stderr_txt>
]]>

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