Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:38:04 (21592): wrapper (7.7.26015): starting
02:38:04 (21592): wrapper: running run_atlas (--nthreads 8)
[2026-03-02 02:38:04] Arguments: --nthreads 8
[2026-03-02 02:38:04] Threads: 8
[2026-03-02 02:38:04] Checking for CVMFS
[2026-03-02 02:38:05] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-02 02:38:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-02 02:38:06] Running cvmfs_config stat atlas.cern.ch
[2026-03-02 02:38:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-02 02:38:08] 2.11.2.0 18097 109644 133160 156790 1 53 21935414 25165824 899 130560 159 36523950 99.764 32892363 1064 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-03-02 02:38:08] CVMFS is ok
[2026-03-02 02:38:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-02 02:38:08] Checking for apptainer binary...
[2026-03-02 02:38:08] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-02 02:38:08] Running /usr/bin/apptainer --version
[2026-03-02 02:38:08] apptainer version 1.3.2-1.el7
[2026-03-02 02:38:08] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-02 02:38:29] cg-vwn387.simple-grid.lan
[2026-03-02 02:38:29] apptainer works
[2026-03-02 02:38:29] Set ATHENA_PROC_NUMBER=8
[2026-03-02 02:38:29] Set ATHENA_CORE_NUMBER=8
[2026-03-02 02:38:30] Starting ATLAS job with PandaID=7035103935
[2026-03-02 02:38:30] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/16 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-02 12:05:05]  *** The last 200 lines of the pilot log: ***
[2026-03-02 12:05:05] 2026-03-02 11:03:49,369 | INFO     | extracted standard memory fields from prmon json
[2026-03-02 12:05:05] 2026-03-02 11:03:49,369 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-02 12:05:05] 2026-03-02 11:03:49,370 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-02 12:05:05] 2026-03-02 11:03:49,370 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-02 12:05:05] 2026-03-02 11:03:49,381 | INFO     | fitting pss+swap vs Time
[2026-03-02 12:05:05] 2026-03-02 11:03:49,382 | INFO     | sum of square deviations: 50195694640.0
[2026-03-02 12:05:05] 2026-03-02 11:03:49,392 | INFO     | sum of deviations: 320031383624.99994
[2026-03-02 12:05:05] 2026-03-02 11:03:49,392 | INFO     | mean x: 1772432785.0
[2026-03-02 12:05:05] 2026-03-02 11:03:49,392 | INFO     | mean y: 2487329.620183486
[2026-03-02 12:05:05] 2026-03-02 11:03:49,392 | INFO     | intersect: -11297966237.842628
[2026-03-02 12:05:05] 2026-03-02 11:03:49,393 | INFO     | chi2: 7.184656865982301
[2026-03-02 12:05:05] 2026-03-02 11:03:49,394 | INFO     | sum of square deviations: 48826794555.0
[2026-03-02 12:05:05] 2026-03-02 11:03:49,403 | INFO     | sum of deviations: 353504937693.0
[2026-03-02 12:05:05] 2026-03-02 11:03:49,403 | INFO     | mean x: 1772432632.5
[2026-03-02 12:05:05] 2026-03-02 11:03:49,404 | INFO     | mean y: 2491028.4
[2026-03-02 12:05:05] 2026-03-02 11:03:49,404 | INFO     | intersect: -12829882938.13536
[2026-03-02 12:05:05] 2026-03-02 11:03:49,405 | INFO     | chi2: 6.435673772228478
[2026-03-02 12:05:05] 2026-03-02 11:03:49,405 | INFO     | current chi2=6.435673772228478 (change=10.424758032635992 %)
[2026-03-02 12:05:05] 2026-03-02 11:03:49,405 | INFO     | right removable region: 539
[2026-03-02 12:05:05] 2026-03-02 11:03:49,406 | INFO     | sum of square deviations: 48826794555.0
[2026-03-02 12:05:05] 2026-03-02 11:03:49,420 | INFO     | sum of deviations: 132138912571.49998
[2026-03-02 12:05:05] 2026-03-02 11:03:49,420 | INFO     | mean x: 1772432937.5
[2026-03-02 12:05:05] 2026-03-02 11:03:49,421 | INFO     | mean y: 2508253.2537037036
[2026-03-02 12:05:05] 2026-03-02 11:03:49,421 | INFO     | intersect: -4794189197.432743
[2026-03-02 12:05:05] 2026-03-02 11:03:49,421 | INFO     | chi2: 2.814402688565275
[2026-03-02 12:05:05] 2026-03-02 11:03:49,422 | INFO     | current chi2=2.814402688565275 (change=60.827597739694085 %)
[2026-03-02 12:05:05] 2026-03-02 11:03:49,423 | INFO     | sum of square deviations: 47483011220.0
[2026-03-02 12:05:05] 2026-03-02 11:03:49,432 | INFO     | sum of deviations: 11116847278.000023
[2026-03-02 12:05:05] 2026-03-02 11:03:49,432 | INFO     | mean x: 1772433090.0
[2026-03-02 12:05:05] 2026-03-02 11:03:49,432 | INFO     | mean y: 2521964.442990654
[2026-03-02 12:05:05] 2026-03-02 11:03:49,432 | INFO     | intersect: -412444725.0264492
[2026-03-02 12:05:05] 2026-03-02 11:03:49,433 | INFO     | chi2: 0.8803265112627726
[2026-03-02 12:05:05] 2026-03-02 11:03:49,433 | INFO     | current chi2=0.8803265112627726 (change=68.7206626528791 %)
[2026-03-02 12:05:05] 2026-03-02 11:03:49,434 | INFO     | sum of square deviations: 46164112072.5
[2026-03-02 12:05:05] 2026-03-02 11:03:49,443 | INFO     | sum of deviations: -3205301455.5
[2026-03-02 12:05:05] 2026-03-02 11:03:49,443 | INFO     | mean x: 1772433242.5
[2026-03-02 12:05:05] 2026-03-02 11:03:49,443 | INFO     | mean y: 2523616.0433962266
[2026-03-02 12:05:05] 2026-03-02 11:03:49,443 | INFO     | intersect: 125588538.05553474
[2026-03-02 12:05:05] 2026-03-02 11:03:49,444 | INFO     | chi2: 0.8492175620983122
[2026-03-02 12:05:05] 2026-03-02 11:03:49,444 | INFO     | current chi2=0.8492175620983122 (change=3.533796695482517 %)
[2026-03-02 12:05:05] 2026-03-02 11:03:49,445 | INFO     | left removable region: 30
[2026-03-02 12:05:05] 2026-03-02 11:03:49,445 | INFO     | sum of square deviations: 40891222510.0
[2026-03-02 12:05:05] 2026-03-02 11:03:49,453 | INFO     | sum of deviations: 46722904311.0
[2026-03-02 12:05:05] 2026-03-02 11:03:49,453 | INFO     | mean x: 1772433517.0
[2026-03-02 12:05:05] 2026-03-02 11:03:49,454 | INFO     | mean y: 2525965.591355599
[2026-03-02 12:05:05] 2026-03-02 11:03:49,454 | INFO     | intersect: -2022682294.9870143
[2026-03-02 12:05:05] 2026-03-02 11:03:49,454 | INFO     | chi2: 0.006376507099882701
[2026-03-02 12:05:05] 2026-03-02 11:03:49,455 | INFO     | current memory leak: 1.14 B/s (using 509 data points, chi2=0.01)
[2026-03-02 12:05:05] 2026-03-02 11:03:49,456 | INFO     | could have reported an average CPU frequency of 1999 MHz (22 samples)
[2026-03-02 12:05:05] 2026-03-02 11:03:49,456 | INFO     | ..............................
[2026-03-02 12:05:05] 2026-03-02 11:03:49,456 | INFO     | . Timing measurements:
[2026-03-02 12:05:05] 2026-03-02 11:03:49,456 | INFO     | . get job = 0 s
[2026-03-02 12:05:05] 2026-03-02 11:03:49,456 | INFO     | . initial setup = 119 s
[2026-03-02 12:05:05] 2026-03-02 11:03:49,456 | INFO     | . payload setup = 148 s
[2026-03-02 12:05:05] 2026-03-02 11:03:49,456 | INFO     | . stage-in = 0 s
[2026-03-02 12:05:05] 2026-03-02 11:03:49,456 | INFO     | . payload execution = 33360 s
[2026-03-02 12:05:05] 2026-03-02 11:03:49,457 | INFO     | . stage-out = 4 s
[2026-03-02 12:05:05] 2026-03-02 11:03:49,457 | INFO     | . log creation = 1 s
[2026-03-02 12:05:05] 2026-03-02 11:03:49,457 | INFO     | ..............................
[2026-03-02 12:05:05] 2026-03-02 11:03:49,600 | INFO     | 
[2026-03-02 12:05:05] 2026-03-02 11:03:49,601 | INFO     | job summary report
[2026-03-02 12:05:05] 2026-03-02 11:03:49,601 | INFO     | --------------------------------------------------
[2026-03-02 12:05:05] 2026-03-02 11:03:49,601 | INFO     | PanDA job id: 7035103935
[2026-03-02 12:05:05] 2026-03-02 11:03:49,601 | INFO     | task id: 48844583
[2026-03-02 12:05:05] 2026-03-02 11:03:49,601 | INFO     | errors: (none)
[2026-03-02 12:05:05] 2026-03-02 11:03:49,601 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-02 12:05:05] 2026-03-02 11:03:49,601 | INFO     | pilot state: finished 
[2026-03-02 12:05:05] 2026-03-02 11:03:49,601 | INFO     | transexitcode: 0
[2026-03-02 12:05:05] 2026-03-02 11:03:49,601 | INFO     | exeerrorcode: 0
[2026-03-02 12:05:05] 2026-03-02 11:03:49,601 | INFO     | exeerrordiag: 
[2026-03-02 12:05:05] 2026-03-02 11:03:49,602 | INFO     | exitcode: 0
[2026-03-02 12:05:05] 2026-03-02 11:03:49,602 | INFO     | exitmsg: OK
[2026-03-02 12:05:05] 2026-03-02 11:03:49,602 | INFO     | cpuconsumptiontime: 129584 s
[2026-03-02 12:05:05] 2026-03-02 11:03:49,602 | INFO     | nevents: 400
[2026-03-02 12:05:05] 2026-03-02 11:03:49,602 | INFO     | neventsw: 0
[2026-03-02 12:05:05] 2026-03-02 11:03:49,602 | INFO     | pid: 30035
[2026-03-02 12:05:05] 2026-03-02 11:03:49,602 | INFO     | pgrp: 30035
[2026-03-02 12:05:05] 2026-03-02 11:03:49,602 | INFO     | corecount: 8
[2026-03-02 12:05:05] 2026-03-02 11:03:49,602 | INFO     | event service: False
[2026-03-02 12:05:05] 2026-03-02 11:03:49,603 | INFO     | sizes: {0: 2281935, 1: 2282392, 2: 2282452, 12: 2282480, 33513: 2322166, 33514: 2322165, 33519: 2331405, 33521: 2331543}
[2026-03-02 12:05:05] 2026-03-02 11:03:49,603 | INFO     | --------------------------------------------------
[2026-03-02 12:05:05] 2026-03-02 11:03:49,603 | INFO     | 
[2026-03-02 12:05:05] 2026-03-02 11:03:49,603 | INFO     | executing command: ls -lF /var/lib/boinc/slots/16
[2026-03-02 12:05:05] 2026-03-02 11:03:49,817 | INFO     | time since job start (33533s) is within the limit (349056.0s)
[2026-03-02 12:05:05] 2026-03-02 11:03:50,284 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-02 12:05:05] 2026-03-02 11:03:50,284 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-02 12:05:05] 2026-03-02 11:03:50,284 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-02 12:05:05] 2026-03-02 11:03:50,284 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-02 12:05:05] 2026-03-02 11:03:50,284 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-02 12:05:05] 2026-03-02 11:03:50,285 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-02 12:05:05] 2026-03-02 11:03:50,285 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-02 12:05:05] 2026-03-02 11:03:50,285 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-02 12:05:05] 2026-03-02 11:03:50,285 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-02 12:05:05] 2026-03-02 11:03:50,285 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-02 12:05:05] 2026-03-02 11:03:50,285 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-02 12:05:05] 2026-03-02 11:03:50,285 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-02 12:05:05] 2026-03-02 11:03:50,285 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-02 12:05:05] 2026-03-02 11:03:50,285 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-02 12:05:05] 2026-03-02 11:03:50,286 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-02 12:05:05] 2026-03-02 11:03:50,286 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-02 12:05:05] 2026-03-02 11:03:50,286 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-02 12:05:05] 2026-03-02 11:03:50,286 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-02 12:05:05] 2026-03-02 11:03:50,286 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-02 12:05:05] 2026-03-02 11:03:50,286 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-02 12:05:05] 2026-03-02 11:03:50,286 | INFO     | job 7035103935 has completed (purged errors)
[2026-03-02 12:05:05] 2026-03-02 11:03:50,287 | INFO     | overall cleanup function is called
[2026-03-02 12:05:05] 2026-03-02 11:03:50,936 | INFO     | PID=25588 has CPU usage=9.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-02 12:05:05] 2026-03-02 11:03:50,937 | INFO     | .. there are 2 such processes running
[2026-03-02 12:05:05] 2026-03-02 11:03:51,295 | INFO     | --- collectZombieJob: --- 10, [30035]
[2026-03-02 12:05:05] 2026-03-02 11:03:51,296 | INFO     | zombie collector waiting for pid 30035
[2026-03-02 12:05:05] 2026-03-02 11:03:51,296 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-02 12:05:05] 2026-03-02 11:03:51,296 | INFO     | collected zombie processes
[2026-03-02 12:05:05] 2026-03-02 11:03:51,296 | INFO     | will attempt to kill all subprocesses of pid=30035
[2026-03-02 12:05:05] 2026-03-02 11:03:51,387 | INFO     | process IDs to be killed: [30035] (in reverse order)
[2026-03-02 12:05:05] 2026-03-02 11:03:52,295 | WARNING  | found no corresponding commands to process id(s)
[2026-03-02 12:05:05] 2026-03-02 11:03:52,295 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-02 12:05:05] 2026-03-02 11:03:52,297 | INFO     | did not find any defunct processes belonging to 30035
[2026-03-02 12:05:05] 2026-03-02 11:03:52,299 | INFO     | did not find any defunct processes belonging to 30035
[2026-03-02 12:05:05] 2026-03-02 11:03:52,299 | INFO     | ready for new job
[2026-03-02 12:05:05] 2026-03-02 11:03:52,299 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-02 12:05:05] 2026-03-02 11:03:52,302 | INFO     | **************************************
[2026-03-02 12:05:05] 2026-03-02 11:03:52,303 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-02 12:05:05] 2026-03-02 11:03:52,303 | INFO     | **************************************
[2026-03-02 12:05:05] 2026-03-02 11:03:52,303 | INFO     | 
[2026-03-02 12:05:05] 2026-03-02 11:03:52,303 | INFO     | pilot is running in a VM
[2026-03-02 12:05:05] 2026-03-02 11:03:52,304 | INFO     | architecture information:
[2026-03-02 12:05:05] 2026-03-02 11:03:52,309 | INFO     | executing command: cat /etc/os-release
[2026-03-02 12:05:05] 2026-03-02 11:03:52,669 | INFO     | cat /etc/os-release:
[2026-03-02 12:05:05] NAME="CentOS Linux"
[2026-03-02 12:05:05] VERSION="7 (Core)"
[2026-03-02 12:05:05] ID="centos"
[2026-03-02 12:05:05] ID_LIKE="rhel fedora"
[2026-03-02 12:05:05] VERSION_ID="7"
[2026-03-02 12:05:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-02 12:05:05] ANSI_COLOR="0;31"
[2026-03-02 12:05:05] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-02 12:05:05] HOME_URL="https://www.centos.org/"
[2026-03-02 12:05:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-02 12:05:05] 
[2026-03-02 12:05:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-02 12:05:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-02 12:05:05] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-02 12:05:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-02 12:05:05] 
[2026-03-02 12:05:05] 2026-03-02 11:03:52,669 | INFO     | **************************************
[2026-03-02 12:05:05] 2026-03-02 11:03:53,173 | INFO     | executing command: df -mP /var/lib/boinc/slots/16
[2026-03-02 12:05:05] 2026-03-02 11:03:53,444 | INFO     | sufficient remaining disk space (496996712448 B)
[2026-03-02 12:05:05] 2026-03-02 11:03:53,444 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-02 12:05:05] 2026-03-02 11:03:53,444 | INFO     | current server update state: UPDATING_FINAL
[2026-03-02 12:05:05] 2026-03-02 11:03:53,445 | INFO     | update_server=False
[2026-03-02 12:05:05] 2026-03-02 11:03:53,445 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-02 12:05:05] 2026-03-02 11:03:53,445 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-02 12:05:05] 2026-03-02 11:03:53,545 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-02 12:05:05] 2026-03-02 11:03:53,546 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-02 12:05:05] 2026-03-02 11:03:53,546 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-02 12:05:05] 2026-03-02 11:03:53,546 | INFO     | will abort loop
[2026-03-02 12:05:05] 2026-03-02 11:03:53,812 | INFO     | all data control threads have been joined
[2026-03-02 12:05:05] 2026-03-02 11:03:54,321 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-02 12:05:05] 2026-03-02 11:03:54,450 | INFO     | [job] retrieve thread has finished
[2026-03-02 12:05:05] 2026-03-02 11:03:54,472 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-02 12:05:05] 2026-03-02 11:03:54,551 | INFO     | [job] job monitor thread has finished
[2026-03-02 12:05:05] 2026-03-02 11:03:54,616 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-02 12:05:05] 2026-03-02 11:03:54,818 | INFO     | [data] control thread has finished
[2026-03-02 12:05:05] 2026-03-02 11:03:54,837 | INFO     | all job control threads have been joined
[2026-03-02 12:05:05] 2026-03-02 11:03:54,861 | INFO     | [payload] validate_post thread has finished
[2026-03-02 12:05:05] 2026-03-02 11:03:54,884 | INFO     | all payload control threads have been joined
[2026-03-02 12:05:05] 2026-03-02 11:03:55,021 | INFO     | [payload] execute_payloads thread has finished
[2026-03-02 12:05:05] 2026-03-02 11:03:55,148 | INFO     | [payload] failed_post thread has finished
[2026-03-02 12:05:05] 2026-03-02 11:03:55,310 | INFO     | [data] copytool_in thread has finished
[2026-03-02 12:05:05] 2026-03-02 11:03:55,417 | INFO     | [job] validate thread has finished
[2026-03-02 12:05:05] 2026-03-02 11:03:55,452 | INFO     | [data] copytool_out thread has finished
[2026-03-02 12:05:05] 2026-03-02 11:03:55,622 | INFO     | [job] queue monitor thread has finished
[2026-03-02 12:05:05] 2026-03-02 11:03:55,787 | INFO     | [payload] validate_pre thread has finished
[2026-03-02 12:05:05] 2026-03-02 11:03:55,835 | INFO     | [job] create_data_payload thread has finished
[2026-03-02 12:05:05] 2026-03-02 11:03:55,843 | INFO     | [job] control thread has finished
[2026-03-02 12:05:05] 2026-03-02 11:03:55,890 | INFO     | [payload] control thread has finished
[2026-03-02 12:05:05] 2026-03-02 11:03:58,330 | INFO     | [data] queue_monitor thread has finished
[2026-03-02 12:05:05] 2026-03-02 11:04:23,086 | INFO     | PID=25588 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-02 12:05:05] 2026-03-02 11:04:23,086 | INFO     | .. there are 2 such processes running
[2026-03-02 12:05:05] 2026-03-02 11:04:23,086 | INFO     | found 0 job(s) in 20 queues
[2026-03-02 12:05:05] 2026-03-02 11:04:23,086 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-02 12:05:05] 2026-03-02 11:04:23,086 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-02 12:05:05] 2026-03-02 11:04:53,464 | INFO     | [monitor] cgroup control has ended
[2026-03-02 12:05:05] 2026-03-02 11:04:54,602 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140203661571904)>', '<ExcThread(monitor, started 140203092076288)>']
[2026-03-02 12:05:05] 2026-03-02 11:04:55,278 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-02 12:05:05] 2026-03-02 11:04:55,279 | INFO     | [monitor] control thread has ended
[2026-03-02 12:05:05] 2026-03-02 11:04:59,628 | INFO     | all workflow threads have been joined
[2026-03-02 12:05:05] 2026-03-02 11:04:59,628 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-02 12:05:05] 2026-03-02 11:04:59,629 | INFO     | traces error code: 0
[2026-03-02 12:05:05] 2026-03-02 11:04:59,629 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-02 12:05:05] 2026-03-02 11:05:00,054 [wrapper] ==== pilot stdout END ====
[2026-03-02 12:05:05] 2026-03-02 11:05:00,166 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-02 12:05:05] 2026-03-02 11:05:00,230 [wrapper] pilotpid: 25588
[2026-03-02 12:05:05] 2026-03-02 11:05:00,343 [wrapper] Pilot exit status: 0
[2026-03-02 12:05:05] 2026-03-02 11:05:00,911 [wrapper] pandaids: 7035103935
[2026-03-02 12:05:05] 2026-03-02 11:05:01,899 [wrapper] cleanup supervisor_pilot  5615 25589
[2026-03-02 12:05:05] 2026-03-02 11:05:01,985 [wrapper] Test setup, not cleaning
[2026-03-02 12:05:05] 2026-03-02 11:05:02,062 [wrapper] apfmon messages muted
[2026-03-02 12:05:05] 2026-03-02 11:05:02,168 [wrapper] ==== wrapper stdout END ====
[2026-03-02 12:05:05] 2026-03-02 11:05:02,228 [wrapper] ==== wrapper stderr END ====
[2026-03-02 12:05:05]  *** Error codes and diagnostics ***
[2026-03-02 12:05:05]     "exeErrorCode": 0,
[2026-03-02 12:05:05]     "exeErrorDiag": "",
[2026-03-02 12:05:05]     "pilotErrorCode": 0,
[2026-03-02 12:05:05]     "pilotErrorDiag": "",
[2026-03-02 12:05:05]  *** Listing of results directory ***
[2026-03-02 12:05:05] total 473072
[2026-03-02 12:05:05] -rw-r--r--. 1 boinc boinc    584627 Mar  1 13:55 pilot3.tar.gz
[2026-03-02 12:05:05] -rwx------. 1 boinc boinc     36322 Mar  1 14:47 runpilot2-wrapper.sh
[2026-03-02 12:05:05] -rw-r--r--. 1 boinc boinc      5111 Mar  1 14:50 queuedata.json
[2026-03-02 12:05:05] -rw-r--r--. 1 boinc boinc       100 Mar  2 02:38 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-02 12:05:05] -rwxr-xr-x. 1 boinc boinc      7986 Mar  2 02:38 run_atlas
[2026-03-02 12:05:05] -rw-r--r--. 1 boinc boinc       105 Mar  2 02:38 job.xml
[2026-03-02 12:05:05] -rw-r--r--. 1 boinc boinc      6392 Mar  2 02:38 init_data.xml
[2026-03-02 12:05:05] -rw-r--r--. 2 boinc boinc 235515368 Mar  2 02:38 EVNT.48453647._000003.pool.root.1
[2026-03-02 12:05:05] -rw-r--r--. 2 boinc boinc     15845 Mar  2 02:38 start_atlas.sh
[2026-03-02 12:05:05] drwxrwx--x. 2 boinc boinc        68 Mar  2 02:38 shared
[2026-03-02 12:05:05] -rw-r--r--. 2 boinc boinc    597991 Mar  2 02:38 input.tar.gz
[2026-03-02 12:05:05] -rw-r--r--. 1 boinc boinc         0 Mar  2 02:38 boinc_lockfile
[2026-03-02 12:05:05] -rw-r--r--. 1 boinc boinc      2691 Mar  2 02:38 pandaJob.out
[2026-03-02 12:05:05] -rw-------. 1 boinc boinc       415 Mar  2 02:44 workernode_map.json
[2026-03-02 12:05:05] -rw-------. 1 boinc boinc    998184 Mar  2 02:44 agis_schedconf.cvmfs.json
[2026-03-02 12:05:05] drwx------. 5 boinc boinc      4096 Mar  2 02:44 pilot3
[2026-03-02 12:05:05] -rw-------. 1 boinc boinc 234225689 Mar  2 12:02 HITS.48844583._000058.pool.root.1
[2026-03-02 12:05:05] -rw-r--r--. 1 boinc boinc       531 Mar  2 12:02 boinc_task_state.xml
[2026-03-02 12:05:05] -rw-------. 1 boinc boinc      1009 Mar  2 12:03 memory_monitor_summary.json
[2026-03-02 12:05:05] -rw-------. 1 boinc boinc   1513015 Mar  2 12:03 agis_ddmendpoints.agis.ALL.json
[2026-03-02 12:05:05] -rw-------. 1 boinc boinc        95 Mar  2 12:03 pilot_heartbeat.json
[2026-03-02 12:05:05] -rw-------. 1 boinc boinc    722226 Mar  2 12:03 log.48844583._000058.job.log.tgz.1
[2026-03-02 12:05:05] -rw-------. 1 boinc boinc      6304 Mar  2 12:03 heartbeat.json
[2026-03-02 12:05:05] -rw-r--r--. 1 boinc boinc      8192 Mar  2 12:04 boinc_mmap_file
[2026-03-02 12:05:05] -rw-r--r--. 1 boinc boinc        29 Mar  2 12:04 wrapper_checkpoint.txt
[2026-03-02 12:05:05] -rw-------. 1 boinc boinc      5067 Mar  2 12:04 pilotlog.txt
[2026-03-02 12:05:05] -rw-------. 1 boinc boinc   4661750 Mar  2 12:05 log.48844583._000058.job.log.1
[2026-03-02 12:05:05] -rw-------. 1 boinc boinc       357 Mar  2 12:05 output.list
[2026-03-02 12:05:05] -rw-r--r--. 1 boinc boinc       620 Mar  2 12:05 runtime_log
[2026-03-02 12:05:05] -rw-------. 1 boinc boinc   5396480 Mar  2 12:05 result.tar.gz
[2026-03-02 12:05:05] -rw-------. 1 boinc boinc       658 Mar  2 12:05 ZpVMDmgJwG9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmrXALDmYWXDLm.diag
[2026-03-02 12:05:05] -rw-r--r--. 1 boinc boinc      8832 Mar  2 12:05 runtime_log.err
[2026-03-02 12:05:05] -rw-r--r--. 1 boinc boinc     20739 Mar  2 12:05 stderr.txt
[2026-03-02 12:05:05] HITS file was successfully produced:
[2026-03-02 12:05:05] -rw-------. 1 boinc boinc 234225689 Mar  2 12:02 shared/HITS.pool.root.1
[2026-03-02 12:05:05]  *** Contents of shared directory: ***
[2026-03-02 12:05:05] total 464608
[2026-03-02 12:05:05] -rw-r--r--. 2 boinc boinc 235515368 Mar  2 02:38 ATLAS.root_0
[2026-03-02 12:05:05] -rw-r--r--. 2 boinc boinc     15845 Mar  2 02:38 start_atlas.sh
[2026-03-02 12:05:05] -rw-r--r--. 2 boinc boinc    597991 Mar  2 02:38 input.tar.gz
[2026-03-02 12:05:05] -rw-------. 1 boinc boinc 234225689 Mar  2 12:02 HITS.pool.root.1
[2026-03-02 12:05:05] -rw-------. 1 boinc boinc   5396480 Mar  2 12:05 result.tar.gz
12:05:06 (21592): run_atlas exited; CPU time 129963.145580
12:05:06 (21592): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN