Stderr output

<core_client_version>8.2.5</core_client_version>
<![CDATA[
<stderr_txt>
2026-03-02 11:25:36 (31657): vboxwrapper version 26210
2026-03-02 11:25:36 (31657): BOINC client version: 8.2.5
2026-03-02 11:25:36 (31657): Detected: VirtualBox VboxManage Interface (Version: 7.0.22)
2026-03-02 11:25:36 (31657): Detected: Sandbox Configuration Enabled
2026-03-02 11:25:36 (31657): Successfully copied 'init_data.xml' to the shared directory.
2026-03-02 11:25:36 (31657): Create VM. (boinc_9fe61b79c7a7a65c, slot#0)
2026-03-02 11:25:36 (31657): Setting Memory Size for VM. (4400MB)
2026-03-02 11:25:36 (31657): Setting CPU Count for VM. (4)
2026-03-02 11:25:36 (31657): Setting Chipset Options for VM.
2026-03-02 11:25:36 (31657): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-03-02 11:25:36 (31657): Setting Boot Options for VM.
2026-03-02 11:25:37 (31657): Setting Network Configuration for NAT. (Driver: virtio)
2026-03-02 11:25:37 (31657): Enabling VM Network Access.
2026-03-02 11:25:37 (31657): Disabling USB Support for VM.
2026-03-02 11:25:37 (31657): Disabling COM Port Support for VM.
2026-03-02 11:25:37 (31657): Disabling Audio Support for VM.
2026-03-02 11:25:37 (31657): Disabling Clipboard Support for VM.
2026-03-02 11:25:37 (31657): Disabling Drag and Drop Support for VM.
2026-03-02 11:25:37 (31657): Adding storage controller(s) to VM.
2026-03-02 11:25:37 (31657): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-03-02 11:25:37 (31657): Adding VirtualBox Guest Additions to VM.
2026-03-02 11:25:37 (31657): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-03-02 11:25:38 (31657): forwarding host port 50911 to guest port 80
2026-03-02 11:25:38 (31657): Enabling remote desktop for VM.
2026-03-02 11:25:38 (31657): Enabling shared directory for VM.
2026-03-02 11:25:38 (31657): Starting VM using VBoxManage interface. (boinc_9fe61b79c7a7a65c, slot#0)
2026-03-02 11:25:41 (31657): Successfully started VM. (PID = '31742')
2026-03-02 11:25:41 (31657): Reporting VM Process ID to BOINC.
2026-03-02 11:25:41 (31657): Guest Log: BIOS: VirtualBox 7.0.22
2026-03-02 11:25:41 (31657): Guest Log: CPUID EDX: 0x178bfbff
2026-03-02 11:25:41 (31657): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-03-02 11:25:41 (31657): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-03-02 11:25:41 (31657): VM state change detected. (old = 'poweredoff', new = 'running')
2026-03-02 11:25:41 (31657): Detected: Web Application Enabled (http://localhost:50911)
2026-03-02 11:25:41 (31657): Detected: Remote Desktop Enabled (localhost:50913)
2026-03-02 11:25:41 (31657): Preference change detected
2026-03-02 11:25:41 (31657): Setting CPU throttle for VM. (17%)
2026-03-02 11:25:41 (31657): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-03-02 11:25:43 (31657): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-03-02 11:25:43 (31657): Guest Log: BIOS: Booting from Hard Disk...
2026-03-02 11:25:48 (31657): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-03-02 11:25:48 (31657): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-03-02 11:25:48 (31657): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-03-02 11:25:48 (31657): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-03-02 11:25:48 (31657): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-03-02 11:25:48 (31657): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-03-02 11:25:48 (31657): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-03-02 11:25:48 (31657): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-03-02 11:25:48 (31657): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-03-02 11:25:48 (31657): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-03-02 11:25:48 (31657): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-03-02 11:25:48 (31657): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-03-02 11:25:48 (31657): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-03-02 11:25:48 (31657): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-03-02 11:25:48 (31657): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-03-02 11:25:48 (31657): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-03-02 11:25:48 (31657): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-03-02 11:25:48 (31657): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-03-02 11:25:48 (31657): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-03-02 11:25:48 (31657): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-03-02 11:25:48 (31657): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-03-02 11:25:48 (31657): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-03-02 11:25:48 (31657): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-03-02 11:25:48 (31657): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-03-02 11:25:48 (31657): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-03-02 11:25:48 (31657): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-03-02 11:25:48 (31657): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-03-02 11:25:48 (31657): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-03-02 11:25:48 (31657): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-03-02 11:25:48 (31657): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-03-02 11:25:48 (31657): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-03-02 11:25:48 (31657): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-03-02 11:26:03 (31657): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-03-02 11:26:03 (31657): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-03-02 11:26:37 (31657): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-03-02 11:26:37 (31657): Guest Log: 00:00:00.000153 main     Log opened 2026-03-02T10:26:35.142750000Z
2026-03-02 11:26:37 (31657): Guest Log: 00:00:00.000252 main     OS Product: Linux
2026-03-02 11:26:37 (31657): Guest Log: 00:00:00.000291 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-03-02 11:26:37 (31657): Guest Log: 00:00:00.000325 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-03-02 11:26:37 (31657): Guest Log: 00:00:00.000360 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-03-02 11:26:37 (31657): Guest Log: 00:00:00.000361 main     Process ID: 1302
2026-03-02 11:26:37 (31657): Guest Log: 00:00:00.000361 main     Package type: LINUX_64BITS_GENERIC
2026-03-02 11:26:37 (31657): Guest Log: 00:00:00.002446 main     5.2.32 r132073 started. Verbose level = 0
2026-03-02 11:26:38 (31657): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-03-02 11:26:38 (31657): Guest Log: [INFO] Mounting shared directory
2026-03-02 11:26:38 (31657): Guest Log: [INFO] Checking for init_data.xml
2026-03-02 11:26:45 (31657): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-03-02 11:26:45 (31657): Guest Log: [INFO] Detected branch: prod
2026-03-02 11:26:46 (31657): Guest Log: This is the prod version of the ATLAS job wrapper
2026-03-02 11:26:46 (31657): Guest Log: Copying input files
2026-03-02 11:27:01 (31657): Guest Log: Copied input files into RunAtlas.
2026-03-02 11:27:02 (31657): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-03-02 11:27:02 (31657): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-03-02 11:27:02 (31657): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-03-02 11:27:02 (31657): Guest Log: Further information can be found at the LHC@home message board.
2026-03-02 11:27:48 (31657): VM state change detected. (old = 'running', new = 'paused')
2026-03-02 11:28:12 (31657): VM state change detected. (old = 'paused', new = 'running')
2026-03-02 11:28:27 (31657): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-03-02 11:28:28 (31657): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-03-02 11:28:28 (31657): Guest Log: 2.6.3.0 1582 1 32168 156803 4 1 3117743 4096001 0 65024 0 0 n/a 0 0 http://s1swinburne-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2026-03-02 11:28:30 (31657): Guest Log: copied the webapp to /var/www
2026-03-02 11:28:31 (31657): Guest Log: ATHENA_PROC_NUMBER=4
2026-03-02 11:28:31 (31657): Guest Log: ATHENA_CORE_NUMBER=4
2026-03-02 11:28:31 (31657): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-03-02 11:28:31 (31657): Guest Log:  *** Starting ATLAS job. (PandaID=7035111763 taskID=48838462) ***
2026-03-02 11:51:58 (31657): VM state change detected. (old = 'running', new = 'paused')
2026-03-02 11:52:18 (31657): VM state change detected. (old = 'paused', new = 'running')
2026-03-02 12:01:16 (31657): VM state change detected. (old = 'running', new = 'paused')
2026-03-02 12:01:36 (31657): VM state change detected. (old = 'paused', new = 'running')
2026-03-02 12:12:05 (31657): VM state change detected. (old = 'running', new = 'paused')
2026-03-02 12:12:29 (31657): VM state change detected. (old = 'paused', new = 'running')
2026-03-02 12:16:49 (31657): VM state change detected. (old = 'running', new = 'paused')
2026-03-02 12:17:10 (31657): VM state change detected. (old = 'paused', new = 'running')
2026-03-02 12:48:21 (31657): VM state change detected. (old = 'running', new = 'paused')
2026-03-02 12:48:46 (31657): VM state change detected. (old = 'paused', new = 'running')
2026-03-02 13:01:03 (31657): VM state change detected. (old = 'running', new = 'paused')
2026-03-02 13:01:26 (31657): VM state change detected. (old = 'paused', new = 'running')
2026-03-02 13:08:01 (31657): Status Report: Elapsed Time: '6000.000000'
2026-03-02 13:08:01 (31657): Status Report: CPU Time: '15005.230000'
2026-03-02 13:23:07 (31657): VM state change detected. (old = 'running', new = 'paused')
2026-03-02 13:23:28 (31657): VM state change detected. (old = 'paused', new = 'running')
2026-03-02 13:31:35 (31657): VM state change detected. (old = 'running', new = 'paused')
2026-03-02 19:11:03 (31657): VM state change detected. (old = 'paused', new = 'running')
2026-03-02 19:11:12 (31657): Guest Log: 02:01:59.893738 timesync vgsvcTimeSyncWorker: Radical host time change: 20 429 279 000 000ns (HostNow=1 772 475 071 595 000 000 ns HostLast=1 772 454 642 316 000 000 ns)
2026-03-02 19:11:22 (31657): Guest Log: 02:02:09.903282 timesync vgsvcTimeSyncWorker: Radical guest time change: 20 566 778 775 000ns (GuestNow=1 772 475 081 709 816 000 ns GuestLast=1 772 454 514 931 041 000 ns fSetTimeLastLoop=true )
2026-03-02 20:11:33 (31657): Guest Log:  *** Job finished ***
2026-03-02 20:11:33 (31657): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-03-02 20:11:33 (31657): Guest Log: 2026-03-02 19:11:17,322 | INFO     | PID=6007 has CPU usage=5.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE -z -t
2026-03-02 20:11:33 (31657): Guest Log: 2026-03-02 19:11:17,323 | INFO     | found 0 job(s) in 20 queues
2026-03-02 20:11:33 (31657): Guest Log: 2026-03-02 19:11:17,323 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-03-02 20:11:33 (31657): Guest Log: 2026-03-02 19:11:17,323 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-03-02 20:11:33 (31657): Guest Log: 2026-03-02 19:11:17,323 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-03-02 20:11:33 (31657): Guest Log: 2026-03-02 19:11:17,323 | INFO     | [monitor] control thread has ended
2026-03-02 20:11:33 (31657): Guest Log: 2026-03-02 19:11:21,005 | INFO     | all workflow threads have been joined
2026-03-02 20:11:33 (31657): Guest Log: 2026-03-02 19:11:21,006 | INFO     | end of generic workflow (traces error code: 0)
2026-03-02 20:11:33 (31657): Guest Log: 2026-03-02 19:11:21,006 | INFO     | traces error code: 0
2026-03-02 20:11:33 (31657): Guest Log: 2026-03-02 19:11:21,006 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-03-02 20:11:33 (31657): Guest Log: 2026-03-02 19:11:21,143 [wrapper] ==== pilot stdout END ====
2026-03-02 20:11:33 (31657): Guest Log: 2026-03-02 19:11:21,226 [wrapper] ==== wrapper stdout RESUME ====
2026-03-02 20:11:33 (31657): Guest Log: 2026-03-02 19:11:21,233 [wrapper] pilotpid: 6007
2026-03-02 20:11:33 (31657): Guest Log: 2026-03-02 19:11:21,239 [wrapper] Pilot exit status: 0
2026-03-02 20:11:33 (31657): Guest Log: 2026-03-02 19:11:21,534 [wrapper] pandaids: 7035111763
2026-03-02 20:11:33 (31657): Guest Log: 2026-03-02 19:11:21,657 [wrapper] cleanup supervisor_pilot 27051 6008
2026-03-02 20:11:33 (31657): Guest Log: 2026-03-02 19:11:21,663 [wrapper] Test setup, not cleaning
2026-03-02 20:11:33 (31657): Guest Log: 2026-03-02 19:11:21,745 [wrapper] apfmon messages muted
2026-03-02 20:11:33 (31657): Guest Log: 2026-03-02 19:11:21,847 [wrapper] ==== wrapper stdout END ====
2026-03-02 20:11:33 (31657): Guest Log: 2026-03-02 19:11:21,853 [wrapper] ==== wrapper stderr END ====
2026-03-02 20:11:33 (31657): Guest Log:  *** Error codes and diagnostics ***
2026-03-02 20:11:33 (31657): Guest Log:     "exeErrorCode": 0,
2026-03-02 20:11:33 (31657): Guest Log:     "exeErrorDiag": "",
2026-03-02 20:11:33 (31657): Guest Log:     "pilotErrorCode": 0,
2026-03-02 20:11:33 (31657): Guest Log:     "pilotErrorDiag": "",
2026-03-02 20:11:33 (31657): Guest Log:  *** Listing of results directory ***
2026-03-02 20:11:33 (31657): Guest Log: total 218268
2026-03-02 20:11:33 (31657): Guest Log: -rw-r--r--. 1 atlas atlas    584627 Mar  1 12:55 pilot3.tar.gz
2026-03-02 20:11:33 (31657): Guest Log: -rwx------. 1 atlas atlas     36322 Mar  1 13:44 runpilot2-wrapper.sh
2026-03-02 20:11:33 (31657): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Mar  1 13:45 queuedata.json
2026-03-02 20:11:33 (31657): Guest Log: -rw-r-----. 1 atlas atlas     15845 Mar  2 10:26 start_atlas.sh
2026-03-02 20:11:33 (31657): Guest Log: -rw-r-----. 1 atlas atlas    597970 Mar  2 10:26 input.tar.gz
2026-03-02 20:11:33 (31657): Guest Log: -rw-r--r--. 1 atlas atlas      8187 Mar  2 10:26 init_data.xml
2026-03-02 20:11:33 (31657): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Mar  2 10:26 EVNT.48220133._000074.pool.root.1 -> /data/./ATLAS.root_0
2026-03-02 20:11:33 (31657): Guest Log: -rw-r--r--. 1 atlas atlas      2561 Mar  2 10:28 pandaJob.out
2026-03-02 20:11:33 (31657): Guest Log: -rw-------. 1 atlas atlas    998143 Mar  2 10:29 agis_schedconf.cvmfs.json
2026-03-02 20:11:33 (31657): Guest Log: -rw-------. 1 atlas atlas       427 Mar  2 10:30 workernode_map.json
2026-03-02 20:11:33 (31657): Guest Log: drwx------. 5 atlas atlas      4096 Mar  2 10:30 pilot3
2026-03-02 20:11:33 (31657): Guest Log: -rw-------. 1 atlas atlas 216043157 Mar  2 19:09 HITS.48838462._003157.pool.root.1
2026-03-02 20:11:33 (31657): Guest Log: -rw-------. 1 atlas atlas      1033 Mar  2 19:10 memory_monitor_summary.json
2026-03-02 20:11:33 (31657): Guest Log: -rw-------. 1 atlas atlas   1512931 Mar  2 19:10 agis_ddmendpoints.agis.ALL.json
2026-03-02 20:11:33 (31657): Guest Log: -rw-------. 1 atlas atlas    360943 Mar  2 19:10 log.48838462._003157.job.log.tgz.1
2026-03-02 20:11:33 (31657): Guest Log: -rw-------. 1 atlas atlas      6381 Mar  2 19:10 heartbeat.json
2026-03-02 20:11:33 (31657): Guest Log: -rw-------. 1 atlas atlas        98 Mar  2 19:11 pilot_heartbeat.json
2026-03-02 20:11:33 (31657): Guest Log: -rw-------. 1 atlas atlas      4801 Mar  2 19:11 pilotlog.txt
2026-03-02 20:11:33 (31657): Guest Log: -rw-------. 1 atlas atlas   1442682 Mar  2 19:11 log.48838462._003157.job.log.1
2026-03-02 20:11:33 (31657): Guest Log: -rw-------. 1 atlas atlas       357 Mar  2 19:11 output.list
2026-03-02 20:11:33 (31657): Guest Log: -rw-r--r--. 1 atlas atlas       620 Mar  2 19:11 runtime_log
2026-03-02 20:11:33 (31657): Guest Log: -rw-------. 1 atlas atlas   1822720 Mar  2 19:11 result.tar.gz
2026-03-02 20:11:33 (31657): Guest Log: -rw-------. 1 atlas atlas       673 Mar  2 19:11 TmRLDmZHwG9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmjQALDmTMLaUm.diag
2026-03-02 20:11:33 (31657): Guest Log: -rw-r--r--. 1 atlas atlas      8800 Mar  2 19:11 runtime_log.err
2026-03-02 20:11:34 (31657): Guest Log: Looking for outputfile HITS.48838462._003157.pool.root.1
2026-03-02 20:11:34 (31657): Guest Log: HITS file was successfully produced
2026-03-02 20:11:34 (31657): Guest Log: -rw-------. 1 atlas atlas 216043157 Mar  2 19:09 /home/atlas/RunAtlas/HITS.48838462._003157.pool.root.1
2026-03-02 20:11:36 (31657): Guest Log: Successfully finished the ATLAS job!
2026-03-02 20:11:37 (31657): Guest Log: Copying the results back to the shared directory!
2026-03-02 20:11:39 (31657): Guest Log:  *** Contents of shared directory: ***
2026-03-02 20:11:41 (31657): Guest Log: total 272552
2026-03-02 20:11:41 (31657): Guest Log: -rw-rw----. 1 root root 276645534 Mar  2 10:25 ATLAS.root_0
2026-03-02 20:11:41 (31657): Guest Log: -rw-rw-r--. 1 root root      8187 Mar  2 10:25 init_data.xml
2026-03-02 20:11:41 (31657): Guest Log: -rw-rw----. 1 root root    597970 Mar  2 10:25 input.tar.gz
2026-03-02 20:11:41 (31657): Guest Log: -rw-r--r--. 1 root root   1822720 Mar  2  2026 result.tar.gz
2026-03-02 20:11:41 (31657): Guest Log: -rw-rw----. 1 root root     15845 Mar  2 10:25 start_atlas.sh
2026-03-02 20:11:41 (31657): Guest Log:  *** Success! Shutting down the machine. ***
2026-03-02 20:11:41 (31657): VM Completion File Detected.
2026-03-02 20:11:41 (31657): Powering off VM.
2026-03-02 20:11:41 (31657): Successfully stopped VM.
2026-03-02 20:11:41 (31657): Deregistering VM. (boinc_9fe61b79c7a7a65c, slot#0)
2026-03-02 20:11:41 (31657): Removing network bandwidth throttle group from VM.
2026-03-02 20:11:41 (31657): Removing VM from VirtualBox.
2026-03-02 20:11:46 (31657): called boinc_finish(0)

</stderr_txt>
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