Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
15:33:35 (667516): wrapper (7.7.26015): starting
15:33:35 (667516): wrapper: running run_atlas (--nthreads 4)
[2026-03-02 15:33:35] Arguments: --nthreads 4
[2026-03-02 15:33:35] Threads: 4
[2026-03-02 15:33:35] Checking for CVMFS
[2026-03-02 15:33:35] No cvmfs_config command found, will try listing directly
[2026-03-02 15:33:35] CVMFS is ok
[2026-03-02 15:33:35] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-02 15:33:35] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-02 15:33:35] Further information can be found at the LHC@home message board.
[2026-03-02 15:33:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-02 15:33:35] Checking for apptainer binary...
[2026-03-02 15:33:35] which: no apptainer in ((null))
[2026-03-02 15:33:35] apptainer is not installed, using version from CVMFS
[2026-03-02 15:33:35] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-02 15:33:35] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot200/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut23.grid.cesnet.cz
[2026-03-02 15:33:35] apptainer works
[2026-03-02 15:33:35] Set ATHENA_PROC_NUMBER=4
[2026-03-02 15:33:35] Set ATHENA_CORE_NUMBER=4
[2026-03-02 15:33:35] Starting ATLAS job with PandaID=7035105055
[2026-03-02 15:33:35] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot200/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-02 16:38:59]  *** The last 200 lines of the pilot log: ***
[2026-03-02 16:38:59]  surl=/var/lib/boinc/var/slot200/slots/0/PanDA_Pilot-7035105055/log.48700930._002050.job.log.tgz.1
[2026-03-02 16:38:59]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b5/c6/log.48700930._002050.job.log.tgz.1
[2026-03-02 16:38:59]  workdir=None
[2026-03-02 16:38:59] ]
[2026-03-02 16:38:59] 2026-03-02 15:38:00,140 | INFO     | transferring file log.48700930._002050.job.log.tgz.1 from /var/lib/boinc/var/slot200/slots/0/PanDA_Pilot-7035105055/log.48700930._002050.job.log.tgz.1 to /var/lib/
[2026-03-02 16:38:59] 2026-03-02 15:38:00,140 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot200/slots/0/PanDA_Pilot-7035105055/log.48700930._002050.job.log.tgz.1 /var/lib/boinc/var/slot200/slots/0/
[2026-03-02 16:38:59] 2026-03-02 15:38:00,160 | INFO     | adding to output.list: log.48700930._002050.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b5/c6/log.48700930._002050.job.log.tg
[2026-03-02 16:38:59] 2026-03-02 15:38:00,160 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-02 16:38:59] 2026-03-02 15:38:00,161 | INFO     | summary of transferred files:
[2026-03-02 16:38:59] 2026-03-02 15:38:00,161 | INFO     |  -- lfn=log.48700930._002050.job.log.tgz.1, status_code=0, status=transferred
[2026-03-02 16:38:59] 2026-03-02 15:38:00,161 | INFO     | stage-out finished correctly
[2026-03-02 16:38:59] 2026-03-02 15:38:00,411 | INFO     | time since job start (3853s) is within the limit (349056.0s)
[2026-03-02 16:38:59] 2026-03-02 15:38:00,910 | WARNING  | process 688868 can no longer be monitored (due to stat problems) - aborting
[2026-03-02 16:38:59] 2026-03-02 15:38:00,911 | INFO     | using path: /var/lib/boinc/var/slot200/slots/0/PanDA_Pilot-7035105055/memory_monitor_summary.json (trf name=prmon)
[2026-03-02 16:38:59] 2026-03-02 15:38:00,911 | INFO     | using path: /var/lib/boinc/var/slot200/slots/0/PanDA_Pilot-7035105055/memory_monitor_summary.json (trf name=prmon)
[2026-03-02 16:38:59] 2026-03-02 15:38:00,911 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-03-02 16:38:59] 2026-03-02 15:38:00,911 | WARNING  | maxPSS not found in memory monitor output
[2026-03-02 16:38:59] 2026-03-02 15:38:00,912 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 2438744 B
[2026-03-02 16:38:59] 2026-03-02 15:38:00,912 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 16333 B
[2026-03-02 16:38:59] 2026-03-02 15:38:00,912 | INFO     | executing command: df -mP /var/lib/boinc/var/slot200/slots/0
[2026-03-02 16:38:59] 2026-03-02 15:38:00,922 | INFO     | sufficient remaining disk space (21271412736 B)
[2026-03-02 16:38:59] 2026-03-02 15:38:00,923 | INFO     | work directory size check will use 5033164800 B as a max limit (20% grace limit added, divider=1)
[2026-03-02 16:38:59] 2026-03-02 15:38:00,923 | INFO     | size of work directory /var/lib/boinc/var/slot200/slots/0/PanDA_Pilot-7035105055: 2732872 B (within 5033164800 B limit)
[2026-03-02 16:38:59] 2026-03-02 15:38:00,923 | INFO     | pfn file=/var/lib/boinc/var/slot200/slots/0/PanDA_Pilot-7035105055/HITS.48700930._002050.pool.root.1 does not exist (skip from workdir size calculation)
[2026-03-02 16:38:59] 2026-03-02 15:38:00,923 | INFO     | total size of present files: 0 B (workdir size: 2732872 B)
[2026-03-02 16:38:59] 2026-03-02 15:38:00,923 | INFO     | output file size check: skipping output file /var/lib/boinc/var/slot200/slots/0/PanDA_Pilot-7035105055/HITS.48700930._002050.pool.root.1 since it does not exist
[2026-03-02 16:38:59] 2026-03-02 15:38:01,373 | INFO     | number of running child processes to parent process 688868: 1
[2026-03-02 16:38:59] 2026-03-02 15:38:01,373 | INFO     | maximum number of monitored processes: 6
[2026-03-02 16:38:59] 2026-03-02 15:38:01,749 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-02 16:38:59] 2026-03-02 15:38:01,799 | INFO     | job 7035105055 has state=finished
[2026-03-02 16:38:59] 2026-03-02 15:38:01,800 | INFO     | preparing for final server update for job 7035105055 in state='finished'
[2026-03-02 16:38:59] 2026-03-02 15:38:01,800 | INFO     | reading metadata from: /var/lib/boinc/var/slot200/slots/0/PanDA_Pilot-7035105055/jobReport.json
[2026-03-02 16:38:59] 2026-03-02 15:38:01,801 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot200/slots/0/workernode_map.json
[2026-03-02 16:38:59] 2026-03-02 15:38:01,801 | INFO     | this job has now completed (state=finished)
[2026-03-02 16:38:59] 2026-03-02 15:38:01,801 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-02 16:38:59] 2026-03-02 15:38:01,801 | INFO     | log transfer has been attempted: DONE
[2026-03-02 16:38:59] 2026-03-02 15:38:01,801 | INFO     | job 7035105055 has finished - writing final server update
[2026-03-02 16:38:59] 2026-03-02 15:38:01,802 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_16499/.job.ad'
[2026-03-02 16:38:59] 2026-03-02 15:38:01,802 | INFO     | total number of processed events: 400 (read)
[2026-03-02 16:38:59] 2026-03-02 15:38:01,814 | INFO     | using path: /var/lib/boinc/var/slot200/slots/0/PanDA_Pilot-7035105055/memory_monitor_summary.json (trf name=prmon)
[2026-03-02 16:38:59] 2026-03-02 15:38:01,814 | INFO     | extracted standard info from prmon json
[2026-03-02 16:38:59] 2026-03-02 15:38:01,814 | INFO     | extracted standard memory fields from prmon json
[2026-03-02 16:38:59] 2026-03-02 15:38:01,814 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-02 16:38:59] 2026-03-02 15:38:01,814 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-02 16:38:59] 2026-03-02 15:38:01,814 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-02 16:38:59] 2026-03-02 15:38:01,815 | INFO     | fitting pss+swap vs Time
[2026-03-02 16:38:59] 2026-03-02 15:38:01,815 | INFO     | sum of square deviations: 54438230.0
[2026-03-02 16:38:59] 2026-03-02 15:38:01,815 | INFO     | sum of deviations: -421693976.00000006
[2026-03-02 16:38:59] 2026-03-02 15:38:01,815 | INFO     | mean x: 1772464030.5
[2026-03-02 16:38:59] 2026-03-02 15:38:01,815 | INFO     | mean y: 2327987.0714285714
[2026-03-02 16:38:59] 2026-03-02 15:38:01,815 | INFO     | intersect: 13732337290.065489
[2026-03-02 16:38:59] 2026-03-02 15:38:01,816 | INFO     | chi2: 0.0003683267461593128
[2026-03-02 16:38:59] 2026-03-02 15:38:01,816 | INFO     | current memory leak: -7.75 B/s (using 56 data points, chi2=0.00)
[2026-03-02 16:38:59] 2026-03-02 15:38:01,816 | INFO     | could have reported an average CPU frequency of 3593 MHz (6 samples)
[2026-03-02 16:38:59] 2026-03-02 15:38:01,816 | INFO     | ..............................
[2026-03-02 16:38:59] 2026-03-02 15:38:01,816 | INFO     | . Timing measurements:
[2026-03-02 16:38:59] 2026-03-02 15:38:01,816 | INFO     | . get job = 0 s
[2026-03-02 16:38:59] 2026-03-02 15:38:01,816 | INFO     | . initial setup = 4 s
[2026-03-02 16:38:59] 2026-03-02 15:38:01,816 | INFO     | . payload setup = 4 s
[2026-03-02 16:38:59] 2026-03-02 15:38:01,816 | INFO     | . stage-in = 0 s
[2026-03-02 16:38:59] 2026-03-02 15:38:01,816 | INFO     | . payload execution = 3831 s
[2026-03-02 16:38:59] 2026-03-02 15:38:01,816 | INFO     | . stage-out = 0 s
[2026-03-02 16:38:59] 2026-03-02 15:38:01,816 | INFO     | . log creation = 0 s
[2026-03-02 16:38:59] 2026-03-02 15:38:01,816 | INFO     | ..............................
[2026-03-02 16:38:59] 2026-03-02 15:38:01,895 | INFO     | 
[2026-03-02 16:38:59] 2026-03-02 15:38:01,896 | INFO     | job summary report
[2026-03-02 16:38:59] 2026-03-02 15:38:01,896 | INFO     | --------------------------------------------------
[2026-03-02 16:38:59] 2026-03-02 15:38:01,896 | INFO     | PanDA job id: 7035105055
[2026-03-02 16:38:59] 2026-03-02 15:38:01,896 | INFO     | task id: 48700930
[2026-03-02 16:38:59] 2026-03-02 15:38:01,896 | INFO     | errors: (none)
[2026-03-02 16:38:59] 2026-03-02 15:38:01,896 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-02 16:38:59] 2026-03-02 15:38:01,896 | INFO     | pilot state: finished 
[2026-03-02 16:38:59] 2026-03-02 15:38:01,896 | INFO     | transexitcode: 0
[2026-03-02 16:38:59] 2026-03-02 15:38:01,896 | INFO     | exeerrorcode: 0
[2026-03-02 16:38:59] 2026-03-02 15:38:01,896 | INFO     | exeerrordiag: 
[2026-03-02 16:38:59] 2026-03-02 15:38:01,896 | INFO     | exitcode: 0
[2026-03-02 16:38:59] 2026-03-02 15:38:01,896 | INFO     | exitmsg: OK
[2026-03-02 16:38:59] 2026-03-02 15:38:01,896 | INFO     | cpuconsumptiontime: 14496 s
[2026-03-02 16:38:59] 2026-03-02 15:38:01,896 | INFO     | nevents: 400
[2026-03-02 16:38:59] 2026-03-02 15:38:01,896 | INFO     | neventsw: 0
[2026-03-02 16:38:59] 2026-03-02 15:38:01,896 | INFO     | pid: 688868
[2026-03-02 16:38:59] 2026-03-02 15:38:01,896 | INFO     | pgrp: 688868
[2026-03-02 16:38:59] 2026-03-02 15:38:01,896 | INFO     | corecount: 4
[2026-03-02 16:38:59] 2026-03-02 15:38:01,896 | INFO     | event service: False
[2026-03-02 16:38:59] 2026-03-02 15:38:01,896 | INFO     | sizes: {0: 2281123, 1: 2282253, 11: 2282253, 3840: 2308035, 3842: 2317057, 3844: 2317463}
[2026-03-02 16:38:59] 2026-03-02 15:38:01,896 | INFO     | --------------------------------------------------
[2026-03-02 16:38:59] 2026-03-02 15:38:01,896 | INFO     | 
[2026-03-02 16:38:59] 2026-03-02 15:38:01,896 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot200/slots/0
[2026-03-02 16:38:59] 2026-03-02 15:38:01,913 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-02 16:38:59] 2026-03-02 15:38:01,914 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-02 16:38:59] 2026-03-02 15:38:01,914 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-02 16:38:59] 2026-03-02 15:38:01,914 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-02 16:38:59] 2026-03-02 15:38:01,914 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-02 16:38:59] 2026-03-02 15:38:01,914 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-02 16:38:59] 2026-03-02 15:38:01,914 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-02 16:38:59] 2026-03-02 15:38:01,914 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-02 16:38:59] 2026-03-02 15:38:01,914 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-02 16:38:59] 2026-03-02 15:38:01,914 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-02 16:38:59] 2026-03-02 15:38:01,914 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-02 16:38:59] 2026-03-02 15:38:01,914 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-02 16:38:59] 2026-03-02 15:38:01,914 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-02 16:38:59] 2026-03-02 15:38:01,914 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-02 16:38:59] 2026-03-02 15:38:01,914 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-02 16:38:59] 2026-03-02 15:38:01,914 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-02 16:38:59] 2026-03-02 15:38:01,914 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-02 16:38:59] 2026-03-02 15:38:01,914 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-02 16:38:59] 2026-03-02 15:38:01,914 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-02 16:38:59] 2026-03-02 15:38:01,914 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-02 16:38:59] 2026-03-02 15:38:01,914 | INFO     | job 7035105055 has completed (purged errors)
[2026-03-02 16:38:59] 2026-03-02 15:38:01,915 | INFO     | overall cleanup function is called
[2026-03-02 16:38:59] 2026-03-02 15:38:02,922 | INFO     | --- collectZombieJob: --- 10, [688868]
[2026-03-02 16:38:59] 2026-03-02 15:38:02,922 | INFO     | zombie collector waiting for pid 688868
[2026-03-02 16:38:59] 2026-03-02 15:38:02,922 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-02 16:38:59] 2026-03-02 15:38:02,922 | INFO     | collected zombie processes
[2026-03-02 16:38:59] 2026-03-02 15:38:02,922 | INFO     | will attempt to kill all subprocesses of pid=688868
[2026-03-02 16:38:59] 2026-03-02 15:38:03,382 | INFO     | process IDs to be killed: [688868] (in reverse order)
[2026-03-02 16:38:59] 2026-03-02 15:38:03,608 | WARNING  | found no corresponding commands to process id(s)
[2026-03-02 16:38:59] 2026-03-02 15:38:03,608 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-02 16:38:59] 2026-03-02 15:38:03,637 | INFO     | did not find any defunct processes belonging to 688868
[2026-03-02 16:38:59] 2026-03-02 15:38:03,667 | INFO     | did not find any defunct processes belonging to 688868
[2026-03-02 16:38:59] 2026-03-02 15:38:03,667 | INFO     | ready for new job
[2026-03-02 16:38:59] 2026-03-02 15:38:03,667 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-02 16:38:59] 2026-03-02 15:38:03,668 | INFO     | **************************************
[2026-03-02 16:38:59] 2026-03-02 15:38:03,669 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-02 16:38:59] 2026-03-02 15:38:03,669 | INFO     | **************************************
[2026-03-02 16:38:59] 2026-03-02 15:38:03,669 | INFO     | 
[2026-03-02 16:38:59] 2026-03-02 15:38:03,675 | INFO     | architecture information:
[2026-03-02 16:38:59] 2026-03-02 15:38:03,675 | INFO     | executing command: cat /etc/os-release
[2026-03-02 16:38:59] 2026-03-02 15:38:03,688 | INFO     | cat /etc/os-release:
[2026-03-02 16:38:59] NAME="CentOS Linux"
[2026-03-02 16:38:59] VERSION="7 (Core)"
[2026-03-02 16:38:59] ID="centos"
[2026-03-02 16:38:59] ID_LIKE="rhel fedora"
[2026-03-02 16:38:59] VERSION_ID="7"
[2026-03-02 16:38:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-02 16:38:59] ANSI_COLOR="0;31"
[2026-03-02 16:38:59] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-02 16:38:59] HOME_URL="https://www.centos.org/"
[2026-03-02 16:38:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-02 16:38:59] 
[2026-03-02 16:38:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-02 16:38:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-02 16:38:59] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-02 16:38:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-02 16:38:59] 
[2026-03-02 16:38:59] 2026-03-02 15:38:03,688 | INFO     | **************************************
[2026-03-02 16:38:59] 2026-03-02 15:38:04,191 | INFO     | executing command: df -mP /var/lib/boinc/var/slot200/slots/0
[2026-03-02 16:38:59] 2026-03-02 15:38:04,207 | INFO     | sufficient remaining disk space (21270364160 B)
[2026-03-02 16:38:59] 2026-03-02 15:38:04,208 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-02 16:38:59] 2026-03-02 15:38:04,208 | INFO     | current server update state: UPDATING_FINAL
[2026-03-02 16:38:59] 2026-03-02 15:38:04,208 | INFO     | update_server=False
[2026-03-02 16:38:59] 2026-03-02 15:38:04,208 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-02 16:38:59] 2026-03-02 15:38:04,208 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-02 16:38:59] 2026-03-02 15:38:04,209 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-02 16:38:59] 2026-03-02 15:38:04,879 | INFO     | all data control threads have been joined
[2026-03-02 16:38:59] 2026-03-02 15:38:04,880 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-02 16:38:59] 2026-03-02 15:38:04,881 | INFO     | aborting loop
[2026-03-02 16:38:59] 2026-03-02 15:38:05,103 | INFO     | all payload control threads have been joined
[2026-03-02 16:38:59] 2026-03-02 15:38:05,213 | INFO     | [job] retrieve thread has finished
[2026-03-02 16:38:59] 2026-03-02 15:38:05,574 | INFO     | [payload] validate_post thread has finished
[2026-03-02 16:38:59] 2026-03-02 15:38:05,885 | INFO     | [data] control thread has finished
[2026-03-02 16:38:59] 2026-03-02 15:38:05,886 | INFO     | [job] job monitor thread has finished
[2026-03-02 16:38:59] 2026-03-02 15:38:05,887 | INFO     | all job control threads have been joined
[2026-03-02 16:38:59] 2026-03-02 15:38:06,012 | INFO     | [job] validate thread has finished
[2026-03-02 16:38:59] 2026-03-02 15:38:06,109 | INFO     | [payload] control thread has finished
[2026-03-02 16:38:59] 2026-03-02 15:38:06,213 | INFO     | [data] copytool_out thread has finished
[2026-03-02 16:38:59] 2026-03-02 15:38:06,225 | INFO     | [payload] failed_post thread has finished
[2026-03-02 16:38:59] 2026-03-02 15:38:06,364 | INFO     | [job] create_data_payload thread has finished
[2026-03-02 16:38:59] 2026-03-02 15:38:06,368 | INFO     | [payload] validate_pre thread has finished
[2026-03-02 16:38:59] 2026-03-02 15:38:06,403 | INFO     | [data] copytool_in thread has finished
[2026-03-02 16:38:59] 2026-03-02 15:38:06,643 | INFO     | [payload] execute_payloads thread has finished
[2026-03-02 16:38:59] 2026-03-02 15:38:06,861 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-02 16:38:59] 2026-03-02 15:38:06,893 | INFO     | [job] control thread has finished
[2026-03-02 16:38:59] 2026-03-02 15:38:07,866 | INFO     | [job] queue monitor thread has finished
[2026-03-02 16:38:59] 2026-03-02 15:38:08,214 | INFO     | [data] queue_monitor thread has finished
[2026-03-02 16:38:59] 2026-03-02 15:38:14,800 | INFO     | job.realtimelogging is not enabled
[2026-03-02 16:38:59] 2026-03-02 15:38:15,802 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-02 16:38:59] 2026-03-02 15:38:34,043 | INFO     | PID=675959 has CPU usage=7.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-02 16:38:59] 2026-03-02 15:38:34,044 | INFO     | .. there are 46 such processes running
[2026-03-02 16:38:59] 2026-03-02 15:38:34,048 | INFO     | found 0 job(s) in 20 queues
[2026-03-02 16:38:59] 2026-03-02 15:38:34,048 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-02 16:38:59] 2026-03-02 15:38:34,048 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-02 16:38:59] 2026-03-02 15:38:53,502 | INFO     | [monitor] cgroup control has ended
[2026-03-02 16:38:59] 2026-03-02 15:38:54,507 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22868003977024)>', '<ExcThread(monitor, started 22867761960704)>']
[2026-03-02 16:38:59] 2026-03-02 15:38:55,154 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-02 16:38:59] 2026-03-02 15:38:55,155 | INFO     | [monitor] control thread has ended
[2026-03-02 16:38:59] 2026-03-02 15:38:59,532 | INFO     | all workflow threads have been joined
[2026-03-02 16:38:59] 2026-03-02 15:38:59,533 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-02 16:38:59] 2026-03-02 15:38:59,533 | INFO     | traces error code: 0
[2026-03-02 16:38:59] 2026-03-02 15:38:59,533 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-02 16:38:59] 2026-03-02 15:38:59,713 [wrapper] ==== pilot stdout END ====
[2026-03-02 16:38:59] 2026-03-02 15:38:59,716 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-02 16:38:59] 2026-03-02 15:38:59,718 [wrapper] pilotpid: 675959
[2026-03-02 16:38:59] 2026-03-02 15:38:59,720 [wrapper] Pilot exit status: 0
[2026-03-02 16:38:59] 2026-03-02 15:38:59,729 [wrapper] pandaids: 7035105055
[2026-03-02 16:38:59] 2026-03-02 15:38:59,861 [wrapper] cleanup supervisor_pilot 1183403 675960
[2026-03-02 16:38:59] 2026-03-02 15:38:59,864 [wrapper] Test setup, not cleaning
[2026-03-02 16:38:59] 2026-03-02 15:38:59,866 [wrapper] apfmon messages muted
[2026-03-02 16:38:59] 2026-03-02 15:38:59,868 [wrapper] ==== wrapper stdout END ====
[2026-03-02 16:38:59] 2026-03-02 15:38:59,869 [wrapper] ==== wrapper stderr END ====
[2026-03-02 16:38:59]  *** Error codes and diagnostics ***
[2026-03-02 16:38:59]     "exeErrorCode": 0,
[2026-03-02 16:38:59]     "exeErrorDiag": "",
[2026-03-02 16:38:59]     "pilotErrorCode": 0,
[2026-03-02 16:38:59]     "pilotErrorDiag": "",
[2026-03-02 16:38:59]  *** Listing of results directory ***
[2026-03-02 16:38:59] total 328504
[2026-03-02 16:38:59] -rw-r--r--. 1 boinc boinc    584627 Mar  1 13:55 pilot3.tar.gz
[2026-03-02 16:38:59] -rwx------. 1 boinc boinc     36322 Mar  1 14:46 runpilot2-wrapper.sh
[2026-03-02 16:38:59] -rw-r--r--. 1 boinc boinc      5111 Mar  1 14:50 queuedata.json
[2026-03-02 16:38:59] -rw-r--r--. 1 boinc boinc       100 Mar  2 15:33 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-02 16:38:59] -rwxr-xr-x. 1 boinc boinc      7986 Mar  2 15:33 run_atlas
[2026-03-02 16:38:59] -rw-r--r--. 1 boinc boinc       105 Mar  2 15:33 job.xml
[2026-03-02 16:38:59] -rw-r--r--. 1 boinc boinc      6705 Mar  2 15:33 init_data.xml
[2026-03-02 16:38:59] -rw-r--r--. 2 boinc boinc 189251019 Mar  2 15:33 EVNT.48700928._000082.pool.root.1
[2026-03-02 16:38:59] -rw-r--r--. 2 boinc boinc     15845 Mar  2 15:33 start_atlas.sh
[2026-03-02 16:38:59] drwxrwx--x. 2 boinc boinc      4096 Mar  2 15:33 shared
[2026-03-02 16:38:59] -rw-r--r--. 2 boinc boinc    597940 Mar  2 15:33 input.tar.gz
[2026-03-02 16:38:59] -rw-r--r--. 1 boinc boinc         0 Mar  2 15:33 boinc_lockfile
[2026-03-02 16:38:59] -rw-r--r--. 1 boinc boinc      2518 Mar  2 15:33 pandaJob.out
[2026-03-02 16:38:59] -rw-------. 1 boinc boinc    998107 Mar  2 15:33 agis_schedconf.cvmfs.json
[2026-03-02 16:38:59] -rw-------. 1 boinc boinc   1512931 Mar  2 15:33 agis_ddmendpoints.agis.ALL.json
[2026-03-02 16:38:59] -rw-------. 1 boinc boinc       445 Mar  2 15:33 workernode_map.json
[2026-03-02 16:38:59] drwx------. 5 boinc boinc      4096 Mar  2 15:33 pilot3
[2026-03-02 16:38:59] -rw-r--r--. 1 boinc boinc       530 Mar  2 16:37 boinc_task_state.xml
[2026-03-02 16:38:59] -rw-------. 1 boinc boinc 141541428 Mar  2 16:37 HITS.48700930._002050.pool.root.1
[2026-03-02 16:38:59] -rw-------. 1 boinc boinc      1027 Mar  2 16:37 memory_monitor_summary.json
[2026-03-02 16:38:59] -rw-------. 1 boinc boinc    255736 Mar  2 16:38 log.48700930._002050.job.log.tgz.1
[2026-03-02 16:38:59] -rw-------. 1 boinc boinc      6348 Mar  2 16:38 heartbeat.json
[2026-03-02 16:38:59] -rw-r--r--. 1 boinc boinc      8192 Mar  2 16:38 boinc_mmap_file
[2026-03-02 16:38:59] -rw-------. 1 boinc boinc        95 Mar  2 16:38 pilot_heartbeat.json
[2026-03-02 16:38:59] -rw-r--r--. 1 boinc boinc        27 Mar  2 16:38 wrapper_checkpoint.txt
[2026-03-02 16:38:59] -rw-------. 1 boinc boinc      4901 Mar  2 16:38 pilotlog.txt
[2026-03-02 16:38:59] -rw-------. 1 boinc boinc    577485 Mar  2 16:38 log.48700930._002050.job.log.1
[2026-03-02 16:38:59] -rw-------. 1 boinc boinc       357 Mar  2 16:38 output.list
[2026-03-02 16:38:59] -rw-r--r--. 1 boinc boinc       620 Mar  2 16:38 runtime_log
[2026-03-02 16:38:59] -rw-------. 1 boinc boinc    849920 Mar  2 16:38 result.tar.gz
[2026-03-02 16:38:59] -rw-r--r--. 1 boinc boinc      9221 Mar  2 16:38 runtime_log.err
[2026-03-02 16:38:59] -rw-------. 1 boinc boinc       662 Mar  2 16:38 QeTLDmOJwG9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmRVALDmpmNten.diag
[2026-03-02 16:38:59] -rw-r--r--. 1 boinc boinc     22501 Mar  2 16:38 stderr.txt
[2026-03-02 16:38:59] HITS file was successfully produced:
[2026-03-02 16:38:59] -rw-------. 1 boinc boinc 141541428 Mar  2 16:37 shared/HITS.pool.root.1
[2026-03-02 16:38:59]  *** Contents of shared directory: ***
[2026-03-02 16:38:59] total 324484
[2026-03-02 16:38:59] -rw-r--r--. 2 boinc boinc 189251019 Mar  2 15:33 ATLAS.root_0
[2026-03-02 16:38:59] -rw-r--r--. 2 boinc boinc     15845 Mar  2 15:33 start_atlas.sh
[2026-03-02 16:38:59] -rw-r--r--. 2 boinc boinc    597940 Mar  2 15:33 input.tar.gz
[2026-03-02 16:38:59] -rw-------. 1 boinc boinc 141541428 Mar  2 16:37 HITS.pool.root.1
[2026-03-02 16:38:59] -rw-------. 1 boinc boinc    849920 Mar  2 16:38 result.tar.gz
16:39:01 (667516): run_atlas exited; CPU time 14664.596020
16:39:01 (667516): called boinc_finish(0)

</stderr_txt>
]]>

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