Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
06:19:48 (3241561): wrapper (7.7.26015): starting
06:19:48 (3241561): wrapper: running run_atlas (--nthreads 4)
[2026-03-03 06:19:48] Arguments: --nthreads 4
[2026-03-03 06:19:48] Threads: 4
[2026-03-03 06:19:48] Checking for CVMFS
[2026-03-03 06:19:48] No cvmfs_config command found, will try listing directly
[2026-03-03 06:19:48] CVMFS is ok
[2026-03-03 06:19:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-03 06:19:48] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-03 06:19:48] Further information can be found at the LHC@home message board.
[2026-03-03 06:19:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-03 06:19:48] Checking for apptainer binary...
[2026-03-03 06:19:48] which: no apptainer in ((null))
[2026-03-03 06:19:48] apptainer is not installed, using version from CVMFS
[2026-03-03 06:19:48] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-03 06:19:48] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot84/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut12.grid.cesnet.cz
[2026-03-03 06:19:48] apptainer works
[2026-03-03 06:19:49] Set ATHENA_PROC_NUMBER=4
[2026-03-03 06:19:49] Set ATHENA_CORE_NUMBER=4
[2026-03-03 06:19:49] Starting ATLAS job with PandaID=7035002828
[2026-03-03 06:19:49] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot84/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-03 15:01:18]  *** The last 200 lines of the pilot log: ***
[2026-03-03 15:01:18] 2026-03-03 13:44:31,828 | INFO     | job 7035002828 has finished - writing final server update
[2026-03-03 15:01:18] 2026-03-03 13:44:31,828 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_2543970/.job.ad'
[2026-03-03 15:01:18] 2026-03-03 13:44:31,828 | INFO     | total number of processed events: 400 (read)
[2026-03-03 15:01:18] 2026-03-03 13:44:31,854 | INFO     | using path: /scratch/boinc/var/slot84/slots/0/PanDA_Pilot-7035002828/memory_monitor_summary.json (trf name=prmon)
[2026-03-03 15:01:18] 2026-03-03 13:44:31,855 | INFO     | extracted standard info from prmon json
[2026-03-03 15:01:18] 2026-03-03 13:44:31,855 | INFO     | extracted standard memory fields from prmon json
[2026-03-03 15:01:18] 2026-03-03 13:44:31,855 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-03 15:01:18] 2026-03-03 13:44:31,855 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-03 15:01:18] 2026-03-03 13:44:31,855 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-03 15:01:18] 2026-03-03 13:44:31,868 | INFO     | fitting pss+swap vs Time
[2026-03-03 15:01:18] 2026-03-03 13:44:31,869 | INFO     | sum of square deviations: 37837435020.0
[2026-03-03 15:01:18] 2026-03-03 13:44:31,876 | INFO     | sum of deviations: -63257202733.5
[2026-03-03 15:01:18] 2026-03-03 13:44:31,876 | INFO     | mean x: 1772530339.5
[2026-03-03 15:01:18] 2026-03-03 13:44:31,877 | INFO     | mean y: 2373506.8125
[2026-03-03 15:01:18] 2026-03-03 13:44:31,877 | INFO     | intersect: 2965716845.9623184
[2026-03-03 15:01:18] 2026-03-03 13:44:31,877 | INFO     | chi2: 2.208432850552641
[2026-03-03 15:01:18] 2026-03-03 13:44:31,878 | INFO     | sum of square deviations: 36704650990.0
[2026-03-03 15:01:18] 2026-03-03 13:44:31,884 | INFO     | sum of deviations: -31738432858.00001
[2026-03-03 15:01:18] 2026-03-03 13:44:31,884 | INFO     | mean x: 1772530187.0
[2026-03-03 15:01:18] 2026-03-03 13:44:31,884 | INFO     | mean y: 2377715.2525458247
[2026-03-03 15:01:18] 2026-03-03 13:44:31,885 | INFO     | intersect: 1535080760.0030525
[2026-03-03 15:01:18] 2026-03-03 13:44:31,885 | INFO     | chi2: 1.4211004963442642
[2026-03-03 15:01:18] 2026-03-03 13:44:31,885 | INFO     | current chi2=1.4211004963442642 (change=35.65117925190045 %)
[2026-03-03 15:01:18] 2026-03-03 13:44:31,886 | INFO     | sum of square deviations: 35594704597.5
[2026-03-03 15:01:18] 2026-03-03 13:44:31,892 | INFO     | sum of deviations: -31602019564.5
[2026-03-03 15:01:18] 2026-03-03 13:44:31,892 | INFO     | mean x: 1772530034.5
[2026-03-03 15:01:18] 2026-03-03 13:44:31,892 | INFO     | mean y: 2377733.9897119342
[2026-03-03 15:01:18] 2026-03-03 13:44:31,892 | INFO     | intersect: 1576081729.074057
[2026-03-03 15:01:18] 2026-03-03 13:44:31,893 | INFO     | chi2: 1.4207263614933126
[2026-03-03 15:01:18] 2026-03-03 13:44:31,893 | INFO     | current chi2=1.4207263614933126 (change=0.02632712126370112 %)
[2026-03-03 15:01:18] 2026-03-03 13:44:31,893 | INFO     | right removable region: 485
[2026-03-03 15:01:18] 2026-03-03 13:44:31,894 | INFO     | sum of square deviations: 36704650990.0
[2026-03-03 15:01:18] 2026-03-03 13:44:31,900 | INFO     | sum of deviations: -121459556165.0
[2026-03-03 15:01:18] 2026-03-03 13:44:31,900 | INFO     | mean x: 1772530492.0
[2026-03-03 15:01:18] 2026-03-03 13:44:31,900 | INFO     | mean y: 2381295.568228106
[2026-03-03 15:01:18] 2026-03-03 13:44:31,900 | INFO     | intersect: 5867871391.248582
[2026-03-03 15:01:18] 2026-03-03 13:44:31,900 | INFO     | chi2: 0.9650488204244331
[2026-03-03 15:01:18] 2026-03-03 13:44:31,901 | INFO     | current chi2=0.9650488204244331 (change=56.30164529644004 %)
[2026-03-03 15:01:18] 2026-03-03 13:44:31,901 | INFO     | sum of square deviations: 35594704597.5
[2026-03-03 15:01:18] 2026-03-03 13:44:31,907 | INFO     | sum of deviations: -119980801149.50003
[2026-03-03 15:01:18] 2026-03-03 13:44:31,907 | INFO     | mean x: 1772530644.5
[2026-03-03 15:01:18] 2026-03-03 13:44:31,907 | INFO     | mean y: 2381088.829218107
[2026-03-03 15:01:18] 2026-03-03 13:44:31,908 | INFO     | intersect: 5977136300.144738
[2026-03-03 15:01:18] 2026-03-03 13:44:31,908 | INFO     | chi2: 0.9607034053740837
[2026-03-03 15:01:18] 2026-03-03 13:44:31,908 | INFO     | current chi2=0.9607034053740837 (change=0.45027929762540103 %)
[2026-03-03 15:01:18] 2026-03-03 13:44:31,908 | INFO     | left removable region: 20
[2026-03-03 15:01:18] 2026-03-03 13:44:31,909 | INFO     | sum of square deviations: 31177068280.0
[2026-03-03 15:01:18] 2026-03-03 13:44:31,914 | INFO     | sum of deviations: -69308078548.99998
[2026-03-03 15:01:18] 2026-03-03 13:44:31,914 | INFO     | mean x: 1772530614.0
[2026-03-03 15:01:18] 2026-03-03 13:44:31,915 | INFO     | mean y: 2382855.1333333333
[2026-03-03 15:01:18] 2026-03-03 13:44:31,915 | INFO     | intersect: 3942801175.493094
[2026-03-03 15:01:18] 2026-03-03 13:44:31,915 | INFO     | chi2: 0.149647777950784
[2026-03-03 15:01:18] 2026-03-03 13:44:31,915 | INFO     | current memory leak: -2.22 B/s (using 465 data points, chi2=0.15)
[2026-03-03 15:01:18] 2026-03-03 13:44:31,916 | INFO     | could have reported an average CPU frequency of 2702 MHz (20 samples)
[2026-03-03 15:01:18] 2026-03-03 13:44:31,917 | INFO     | ..............................
[2026-03-03 15:01:18] 2026-03-03 13:44:31,917 | INFO     | . Timing measurements:
[2026-03-03 15:01:18] 2026-03-03 13:44:31,917 | INFO     | . get job = 0 s
[2026-03-03 15:01:18] 2026-03-03 13:44:31,917 | INFO     | . initial setup = 8 s
[2026-03-03 15:01:18] 2026-03-03 13:44:31,917 | INFO     | . payload setup = 9 s
[2026-03-03 15:01:18] 2026-03-03 13:44:31,917 | INFO     | . stage-in = 0 s
[2026-03-03 15:01:18] 2026-03-03 13:44:31,917 | INFO     | . payload execution = 30228 s
[2026-03-03 15:01:18] 2026-03-03 13:44:31,917 | INFO     | . stage-out = 1 s
[2026-03-03 15:01:18] 2026-03-03 13:44:31,917 | INFO     | . log creation = 0 s
[2026-03-03 15:01:18] 2026-03-03 13:44:31,917 | INFO     | ..............................
[2026-03-03 15:01:18] 2026-03-03 13:44:32,504 | INFO     | 
[2026-03-03 15:01:18] 2026-03-03 13:44:32,505 | INFO     | job summary report
[2026-03-03 15:01:18] 2026-03-03 13:44:32,505 | INFO     | --------------------------------------------------
[2026-03-03 15:01:18] 2026-03-03 13:44:32,505 | INFO     | PanDA job id: 7035002828
[2026-03-03 15:01:18] 2026-03-03 13:44:32,505 | INFO     | task id: 48845110
[2026-03-03 15:01:18] 2026-03-03 13:44:32,505 | INFO     | errors: (none)
[2026-03-03 15:01:18] 2026-03-03 13:44:32,505 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-03 15:01:18] 2026-03-03 13:44:32,505 | INFO     | pilot state: finished 
[2026-03-03 15:01:18] 2026-03-03 13:44:32,505 | INFO     | transexitcode: 0
[2026-03-03 15:01:18] 2026-03-03 13:44:32,505 | INFO     | exeerrorcode: 0
[2026-03-03 15:01:18] 2026-03-03 13:44:32,505 | INFO     | exeerrordiag: 
[2026-03-03 15:01:18] 2026-03-03 13:44:32,505 | INFO     | exitcode: 0
[2026-03-03 15:01:18] 2026-03-03 13:44:32,505 | INFO     | exitmsg: OK
[2026-03-03 15:01:18] 2026-03-03 13:44:32,506 | INFO     | cpuconsumptiontime: 116895 s
[2026-03-03 15:01:18] 2026-03-03 13:44:32,506 | INFO     | nevents: 400
[2026-03-03 15:01:18] 2026-03-03 13:44:32,506 | INFO     | neventsw: 0
[2026-03-03 15:01:18] 2026-03-03 13:44:32,506 | INFO     | pid: 3260516
[2026-03-03 15:01:18] 2026-03-03 13:44:32,506 | INFO     | pgrp: 3260516
[2026-03-03 15:01:18] 2026-03-03 13:44:32,506 | INFO     | corecount: 4
[2026-03-03 15:01:18] 2026-03-03 13:44:32,506 | INFO     | event service: False
[2026-03-03 15:01:18] 2026-03-03 13:44:32,506 | INFO     | sizes: {0: 2282151, 1: 2282441, 11: 2282441, 30242: 2322109, 30245: 2335984, 30247: 2336122}
[2026-03-03 15:01:18] 2026-03-03 13:44:32,506 | INFO     | --------------------------------------------------
[2026-03-03 15:01:18] 2026-03-03 13:44:32,506 | INFO     | 
[2026-03-03 15:01:18] 2026-03-03 13:44:32,506 | INFO     | executing command: ls -lF /scratch/boinc/var/slot84/slots/0
[2026-03-03 15:01:18] 2026-03-03 13:44:32,538 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-03 15:01:18] 2026-03-03 13:44:32,538 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-03 15:01:18] 2026-03-03 13:44:32,538 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-03 15:01:18] 2026-03-03 13:44:32,538 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-03 15:01:18] 2026-03-03 13:44:32,538 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-03 15:01:18] 2026-03-03 13:44:32,538 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-03 15:01:18] 2026-03-03 13:44:32,539 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-03 15:01:18] 2026-03-03 13:44:32,539 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-03 15:01:18] 2026-03-03 13:44:32,539 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-03 15:01:18] 2026-03-03 13:44:32,539 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-03 15:01:18] 2026-03-03 13:44:32,539 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-03 15:01:18] 2026-03-03 13:44:32,539 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-03 15:01:18] 2026-03-03 13:44:32,539 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-03 15:01:18] 2026-03-03 13:44:32,539 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-03 15:01:18] 2026-03-03 13:44:32,539 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-03 15:01:18] 2026-03-03 13:44:32,539 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-03 15:01:18] 2026-03-03 13:44:32,540 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-03 15:01:18] 2026-03-03 13:44:32,540 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-03 15:01:18] 2026-03-03 13:44:32,540 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-03 15:01:18] 2026-03-03 13:44:32,540 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-03 15:01:18] 2026-03-03 13:44:32,540 | INFO     | job 7035002828 has completed (purged errors)
[2026-03-03 15:01:18] 2026-03-03 13:44:32,540 | INFO     | overall cleanup function is called
[2026-03-03 15:01:18] 2026-03-03 13:44:33,549 | INFO     | --- collectZombieJob: --- 10, [3260516]
[2026-03-03 15:01:18] 2026-03-03 13:44:33,549 | INFO     | zombie collector waiting for pid 3260516
[2026-03-03 15:01:18] 2026-03-03 13:44:33,549 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-03 15:01:18] 2026-03-03 13:44:33,549 | INFO     | collected zombie processes
[2026-03-03 15:01:18] 2026-03-03 13:44:33,549 | INFO     | will attempt to kill all subprocesses of pid=3260516
[2026-03-03 15:01:18] 2026-03-03 13:44:34,414 | INFO     | process IDs to be killed: [3260516] (in reverse order)
[2026-03-03 15:01:18] 2026-03-03 13:44:34,732 | WARNING  | found no corresponding commands to process id(s)
[2026-03-03 15:01:18] 2026-03-03 13:44:34,732 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-03 15:01:18] 2026-03-03 13:44:34,764 | INFO     | did not find any defunct processes belonging to 3260516
[2026-03-03 15:01:18] 2026-03-03 13:44:34,790 | INFO     | did not find any defunct processes belonging to 3260516
[2026-03-03 15:01:18] 2026-03-03 13:44:34,791 | INFO     | ready for new job
[2026-03-03 15:01:18] 2026-03-03 13:44:34,791 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-03 15:01:18] 2026-03-03 13:44:34,795 | INFO     | **************************************
[2026-03-03 15:01:18] 2026-03-03 13:44:34,795 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-03 15:01:18] 2026-03-03 13:44:34,795 | INFO     | **************************************
[2026-03-03 15:01:18] 2026-03-03 13:44:34,795 | INFO     | 
[2026-03-03 15:01:18] 2026-03-03 13:44:34,803 | INFO     | architecture information:
[2026-03-03 15:01:18] 2026-03-03 13:44:34,804 | INFO     | executing command: cat /etc/os-release
[2026-03-03 15:01:18] 2026-03-03 13:44:34,830 | INFO     | cat /etc/os-release:
[2026-03-03 15:01:18] NAME="CentOS Linux"
[2026-03-03 15:01:18] VERSION="7 (Core)"
[2026-03-03 15:01:18] ID="centos"
[2026-03-03 15:01:18] ID_LIKE="rhel fedora"
[2026-03-03 15:01:18] VERSION_ID="7"
[2026-03-03 15:01:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-03 15:01:18] ANSI_COLOR="0;31"
[2026-03-03 15:01:18] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-03 15:01:18] HOME_URL="https://www.centos.org/"
[2026-03-03 15:01:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-03 15:01:18] 
[2026-03-03 15:01:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-03 15:01:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-03 15:01:18] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-03 15:01:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-03 15:01:18] 
[2026-03-03 15:01:18] 2026-03-03 13:44:34,830 | INFO     | **************************************
[2026-03-03 15:01:18] 2026-03-03 13:44:35,333 | INFO     | executing command: df -mP /scratch/boinc/var/slot84/slots/0
[2026-03-03 15:01:18] 2026-03-03 13:44:35,355 | INFO     | sufficient remaining disk space (3320327438336 B)
[2026-03-03 15:01:18] 2026-03-03 13:44:35,356 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-03 15:01:18] 2026-03-03 13:44:35,356 | INFO     | current server update state: UPDATING_FINAL
[2026-03-03 15:01:18] 2026-03-03 13:44:35,356 | INFO     | update_server=False
[2026-03-03 15:01:18] 2026-03-03 13:44:35,356 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-03 15:01:18] 2026-03-03 13:44:35,356 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-03 15:01:18] 2026-03-03 13:44:35,357 | INFO     | aborting loop
[2026-03-03 15:01:18] 2026-03-03 13:44:35,629 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-03 15:01:18] 2026-03-03 13:44:35,815 | INFO     | all data control threads have been joined
[2026-03-03 15:01:18] 2026-03-03 13:44:36,225 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-03 15:01:18] 2026-03-03 13:44:36,361 | INFO     | [job] retrieve thread has finished
[2026-03-03 15:01:18] 2026-03-03 13:44:36,362 | INFO     | [job] job monitor thread has finished
[2026-03-03 15:01:18] 2026-03-03 13:44:36,453 | INFO     | [payload] validate_pre thread has finished
[2026-03-03 15:01:18] 2026-03-03 13:44:36,664 | INFO     | all job control threads have been joined
[2026-03-03 15:01:18] 2026-03-03 13:44:36,749 | INFO     | all payload control threads have been joined
[2026-03-03 15:01:18] 2026-03-03 13:44:36,820 | INFO     | [data] control thread has finished
[2026-03-03 15:01:18] 2026-03-03 13:44:36,884 | INFO     | [job] create_data_payload thread has finished
[2026-03-03 15:01:18] 2026-03-03 13:44:36,961 | INFO     | [payload] execute_payloads thread has finished
[2026-03-03 15:01:18] 2026-03-03 13:44:37,018 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-03 15:01:18] 2026-03-03 13:44:37,345 | INFO     | [data] copytool_in thread has finished
[2026-03-03 15:01:18] 2026-03-03 13:44:37,574 | INFO     | [payload] failed_post thread has finished
[2026-03-03 15:01:18] 2026-03-03 13:44:37,634 | INFO     | [data] copytool_out thread has finished
[2026-03-03 15:01:18] 2026-03-03 13:44:37,652 | INFO     | [payload] validate_post thread has finished
[2026-03-03 15:01:18] 2026-03-03 13:44:37,669 | INFO     | [job] control thread has finished
[2026-03-03 15:01:18] 2026-03-03 13:44:37,750 | INFO     | [job] validate thread has finished
[2026-03-03 15:01:18] 2026-03-03 13:44:37,754 | INFO     | [payload] control thread has finished
[2026-03-03 15:01:18] 2026-03-03 13:44:38,023 | INFO     | [job] queue monitor thread has finished
[2026-03-03 15:01:18] 2026-03-03 13:44:40,233 | INFO     | [data] queue_monitor thread has finished
[2026-03-03 15:01:18] 2026-03-03 13:44:46,332 | INFO     | job.realtimelogging is not enabled
[2026-03-03 15:01:18] 2026-03-03 13:44:47,337 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-03 15:01:18] 2026-03-03 13:45:02,824 | INFO     | [monitor] cgroup control has ended
[2026-03-03 15:01:18] 2026-03-03 13:45:03,829 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23019411117888)>', '<ExcThread(monitor, started 23019172144896)>']
[2026-03-03 15:01:18] 2026-03-03 13:45:05,177 | INFO     | PID=3250518 has CPU usage=12.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-03-03 15:01:18] 2026-03-03 13:45:05,177 | INFO     | .. there are 18 such processes running
[2026-03-03 15:01:18] 2026-03-03 13:45:05,180 | INFO     | found 0 job(s) in 20 queues
[2026-03-03 15:01:18] 2026-03-03 13:45:05,180 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-03 15:01:18] 2026-03-03 13:45:05,180 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-03 15:01:18] 2026-03-03 13:45:05,180 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-03 15:01:18] 2026-03-03 13:45:05,180 | INFO     | [monitor] control thread has ended
[2026-03-03 15:01:18] 2026-03-03 13:45:08,854 | INFO     | all workflow threads have been joined
[2026-03-03 15:01:18] 2026-03-03 13:45:08,854 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-03 15:01:18] 2026-03-03 13:45:08,854 | INFO     | traces error code: 0
[2026-03-03 15:01:18] 2026-03-03 13:45:08,855 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-03 15:01:18] 2026-03-03 13:45:09,000 [wrapper] ==== pilot stdout END ====
[2026-03-03 15:01:18] 2026-03-03 13:45:09,007 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-03 15:01:18] 2026-03-03 13:45:09,011 [wrapper] pilotpid: 3250518
[2026-03-03 15:01:18] 2026-03-03 13:45:09,015 [wrapper] Pilot exit status: 0
[2026-03-03 15:01:18] 2026-03-03 13:45:09,029 [wrapper] pandaids: 7035002828
[2026-03-03 15:01:18] 2026-03-03 13:45:09,237 [wrapper] cleanup supervisor_pilot 4082421 3250519
[2026-03-03 15:01:18] 2026-03-03 13:45:09,244 [wrapper] Test setup, not cleaning
[2026-03-03 15:01:18] 2026-03-03 13:45:09,250 [wrapper] apfmon messages muted
[2026-03-03 15:01:18] 2026-03-03 13:45:09,254 [wrapper] ==== wrapper stdout END ====
[2026-03-03 15:01:18] 2026-03-03 13:45:09,258 [wrapper] ==== wrapper stderr END ====
[2026-03-03 15:01:18]  *** Error codes and diagnostics ***
[2026-03-03 15:01:18]     "exeErrorCode": 0,
[2026-03-03 15:01:18]     "exeErrorDiag": "",
[2026-03-03 15:01:18]     "pilotErrorCode": 0,
[2026-03-03 15:01:18]     "pilotErrorDiag": "",
[2026-03-03 15:01:18]  *** Listing of results directory ***
[2026-03-03 15:01:18] total 651904
[2026-03-03 15:01:18] -rw-r--r-- 1 boinc boinc    584627 Mar  1 13:02 pilot3.tar.gz
[2026-03-03 15:01:18] -rwx------ 1 boinc boinc     36322 Mar  1 13:05 runpilot2-wrapper.sh
[2026-03-03 15:01:18] -rw-r--r-- 1 boinc boinc      5111 Mar  1 13:08 queuedata.json
[2026-03-03 15:01:18] -rw-r--r-- 1 boinc boinc       100 Mar  3 06:19 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-03 15:01:18] -rwxr-xr-x 1 boinc boinc      7986 Mar  3 06:19 run_atlas
[2026-03-03 15:01:18] -rw-r--r-- 1 boinc boinc       105 Mar  3 06:19 job.xml
[2026-03-03 15:01:18] -rw-r--r-- 2 boinc boinc 300391626 Mar  3 06:19 EVNT.48449575._000003.pool.root.1
[2026-03-03 15:01:18] -rw-r--r-- 1 boinc boinc      6699 Mar  3 06:19 init_data.xml
[2026-03-03 15:01:18] -rw-r--r-- 2 boinc boinc     15845 Mar  3 06:19 start_atlas.sh
[2026-03-03 15:01:18] drwxrwx--x 2 boinc boinc      4096 Mar  3 06:19 shared
[2026-03-03 15:01:18] -rw-r--r-- 2 boinc boinc    597987 Mar  3 06:19 input.tar.gz
[2026-03-03 15:01:18] -rw-r--r-- 1 boinc boinc         0 Mar  3 06:19 boinc_lockfile
[2026-03-03 15:01:18] -rw-r--r-- 1 boinc boinc      2676 Mar  3 06:19 pandaJob.out
[2026-03-03 15:01:18] -rw------- 1 boinc boinc    997730 Mar  3 06:20 agis_schedconf.cvmfs.json
[2026-03-03 15:01:18] -rw------- 1 boinc boinc       443 Mar  3 06:20 workernode_map.json
[2026-03-03 15:01:18] drwx------ 5 boinc boinc      4096 Mar  3 06:20 pilot3
[2026-03-03 15:01:18] -rw------- 1 boinc boinc 353700303 Mar  3 14:43 HITS.48845110._000057.pool.root.1
[2026-03-03 15:01:18] -rw-r--r-- 1 boinc boinc       529 Mar  3 14:43 boinc_task_state.xml
[2026-03-03 15:01:18] -rw------- 1 boinc boinc      1031 Mar  3 14:44 memory_monitor_summary.json
[2026-03-03 15:01:18] -rw------- 1 boinc boinc   1516104 Mar  3 14:44 agis_ddmendpoints.agis.ALL.json
[2026-03-03 15:01:18] -rw------- 1 boinc boinc    609877 Mar  3 14:44 log.48845110._000057.job.log.tgz.1
[2026-03-03 15:01:18] -rw------- 1 boinc boinc      6349 Mar  3 14:44 heartbeat.json
[2026-03-03 15:01:18] -rw------- 1 boinc boinc        95 Mar  3 14:45 pilot_heartbeat.json
[2026-03-03 15:01:18] -rw------- 1 boinc boinc      4904 Mar  3 14:45 pilotlog.txt
[2026-03-03 15:01:18] -rw------- 1 boinc boinc   4149950 Mar  3 14:45 log.48845110._000057.job.log.1
[2026-03-03 15:01:18] -rw------- 1 boinc boinc       357 Mar  3 14:45 output.list
[2026-03-03 15:01:18] -rw-r--r-- 1 boinc boinc       620 Mar  3 14:45 runtime_log
[2026-03-03 15:01:18] -rw------- 1 boinc boinc   4782080 Mar  3 14:45 result.tar.gz
[2026-03-03 15:01:18] -rw-r--r-- 1 boinc boinc      9205 Mar  3 14:45 runtime_log.err
[2026-03-03 15:01:18] -rw------- 1 boinc boinc       669 Mar  3 14:45 ef2NDmkjuG9n9Rq4apOajLDm4fhM0noT9bVooX4SDmiO8KDm6AhKkn.diag
[2026-03-03 15:01:18] -rw-r--r-- 1 boinc boinc        27 Mar  3 15:01 wrapper_checkpoint.txt
[2026-03-03 15:01:18] -rw-r--r-- 1 boinc boinc      8192 Mar  3 15:01 boinc_mmap_file
[2026-03-03 15:01:18] -rw-r--r-- 1 boinc boinc     20879 Mar  3 15:01 stderr.txt
[2026-03-03 15:01:18] HITS file was successfully produced:
[2026-03-03 15:01:18] -rw------- 1 boinc boinc 353700303 Mar  3 14:43 shared/HITS.pool.root.1
[2026-03-03 15:01:18]  *** Contents of shared directory: ***
[2026-03-03 15:01:18] total 644044
[2026-03-03 15:01:18] -rw-r--r-- 2 boinc boinc 300391626 Mar  3 06:19 ATLAS.root_0
[2026-03-03 15:01:18] -rw-r--r-- 2 boinc boinc     15845 Mar  3 06:19 start_atlas.sh
[2026-03-03 15:01:18] -rw-r--r-- 2 boinc boinc    597987 Mar  3 06:19 input.tar.gz
[2026-03-03 15:01:18] -rw------- 1 boinc boinc 353700303 Mar  3 14:43 HITS.pool.root.1
[2026-03-03 15:01:18] -rw------- 1 boinc boinc   4782080 Mar  3 14:45 result.tar.gz
15:01:19 (3241561): run_atlas exited; CPU time 118953.490900
15:01:19 (3241561): called boinc_finish(0)

</stderr_txt>
]]>

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