Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
10:29:00 (2156818): wrapper (7.7.26015): starting
10:29:00 (2156818): wrapper: running run_atlas (--nthreads 4)
[2026-03-02 10:29:00] Arguments: --nthreads 4
[2026-03-02 10:29:00] Threads: 4
[2026-03-02 10:29:00] Checking for CVMFS
[2026-03-02 10:29:00] No cvmfs_config command found, will try listing directly
[2026-03-02 10:29:00] CVMFS is ok
[2026-03-02 10:29:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-02 10:29:00] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-02 10:29:00] Further information can be found at the LHC@home message board.
[2026-03-02 10:29:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-02 10:29:00] Checking for apptainer binary...
[2026-03-02 10:29:00] which: no apptainer in ((null))
[2026-03-02 10:29:00] apptainer is not installed, using version from CVMFS
[2026-03-02 10:29:00] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-02 10:29:01] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot180/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut23.grid.cesnet.cz
[2026-03-02 10:29:01] apptainer works
[2026-03-02 10:29:01] Set ATHENA_PROC_NUMBER=4
[2026-03-02 10:29:01] Set ATHENA_CORE_NUMBER=4
[2026-03-02 10:29:01] Starting ATLAS job with PandaID=7035002545
[2026-03-02 10:29:01] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot180/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-02 13:34:37]  *** The last 200 lines of the pilot log: ***
[2026-03-02 13:34:37] 2026-03-02 12:33:37,654 | INFO     | extracted standard memory fields from prmon json
[2026-03-02 13:34:37] 2026-03-02 12:33:37,654 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-02 13:34:37] 2026-03-02 12:33:37,654 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-02 13:34:37] 2026-03-02 12:33:37,654 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-02 13:34:37] 2026-03-02 12:33:37,656 | INFO     | fitting pss+swap vs Time
[2026-03-02 13:34:37] 2026-03-02 12:33:37,656 | INFO     | sum of square deviations: 1838657730.0
[2026-03-02 13:34:37] 2026-03-02 12:33:37,657 | INFO     | sum of deviations: 20333581643.999996
[2026-03-02 13:34:37] 2026-03-02 12:33:37,657 | INFO     | mean x: 1772449264.0
[2026-03-02 13:34:37] 2026-03-02 12:33:37,657 | INFO     | mean y: 2331442.6132596685
[2026-03-02 13:34:37] 2026-03-02 12:33:37,657 | INFO     | intersect: -19599055608.03249
[2026-03-02 13:34:37] 2026-03-02 12:33:37,657 | INFO     | chi2: 1.0997655290301593
[2026-03-02 13:34:37] 2026-03-02 12:33:37,657 | INFO     | sum of square deviations: 1690450300.0
[2026-03-02 13:34:37] 2026-03-02 12:33:37,658 | INFO     | sum of deviations: 19632355259.5
[2026-03-02 13:34:37] 2026-03-02 12:33:37,658 | INFO     | mean x: 1772449111.5
[2026-03-02 13:34:37] 2026-03-02 12:33:37,658 | INFO     | mean y: 2330720.9261363638
[2026-03-02 13:34:37] 2026-03-02 12:33:37,658 | INFO     | intersect: -20582332807.101353
[2026-03-02 13:34:37] 2026-03-02 12:33:37,658 | INFO     | chi2: 1.1003839420403625
[2026-03-02 13:34:37] 2026-03-02 12:33:37,658 | INFO     | current chi2=1.1003839420403625 (change=-0.056231350581474444 %)
[2026-03-02 13:34:37] 2026-03-02 12:33:37,658 | INFO     | right removable region: 175
[2026-03-02 13:34:37] 2026-03-02 12:33:37,658 | INFO     | sum of square deviations: 1690450300.0
[2026-03-02 13:34:37] 2026-03-02 12:33:37,659 | INFO     | sum of deviations: 1546793958.0
[2026-03-02 13:34:37] 2026-03-02 12:33:37,659 | INFO     | mean x: 1772449416.5
[2026-03-02 13:34:37] 2026-03-02 12:33:37,659 | INFO     | mean y: 2350477.5681818184
[2026-03-02 13:34:37] 2026-03-02 12:33:37,659 | INFO     | intersect: -1619474221.0359864
[2026-03-02 13:34:37] 2026-03-02 12:33:37,659 | INFO     | chi2: 0.000983771075583083
[2026-03-02 13:34:37] 2026-03-02 12:33:37,659 | INFO     | current chi2=0.000983771075583083 (change=99.91054719850597 %)
[2026-03-02 13:34:37] 2026-03-02 12:33:37,659 | INFO     | sum of square deviations: 1550429070.0
[2026-03-02 13:34:37] 2026-03-02 12:33:37,660 | INFO     | sum of deviations: 976317749.0
[2026-03-02 13:34:37] 2026-03-02 12:33:37,660 | INFO     | mean x: 1772449569.0
[2026-03-02 13:34:37] 2026-03-02 12:33:37,660 | INFO     | mean y: 2351092.1578947366
[2026-03-02 13:34:37] 2026-03-02 12:33:37,660 | INFO     | intersect: -1113774764.1652842
[2026-03-02 13:34:37] 2026-03-02 12:33:37,660 | INFO     | chi2: 0.0004996083893387399
[2026-03-02 13:34:37] 2026-03-02 12:33:37,660 | INFO     | current chi2=0.0004996083893387399 (change=49.21497472949985 %)
[2026-03-02 13:34:37] 2026-03-02 12:33:37,660 | INFO     | sum of square deviations: 1418361477.5
[2026-03-02 13:34:37] 2026-03-02 12:33:37,660 | INFO     | sum of deviations: 881294816.0000002
[2026-03-02 13:34:37] 2026-03-02 12:33:37,660 | INFO     | mean x: 1772449721.5
[2026-03-02 13:34:37] 2026-03-02 12:33:37,661 | INFO     | mean y: 2351203.7831325303
[2026-03-02 13:34:37] 2026-03-02 12:33:37,661 | INFO     | intersect: -1098955322.0623524
[2026-03-02 13:34:37] 2026-03-02 12:33:37,661 | INFO     | chi2: 0.00048375082633272183
[2026-03-02 13:34:37] 2026-03-02 12:33:37,661 | INFO     | current chi2=0.00048375082633272183 (change=3.17399854454134 %)
[2026-03-02 13:34:37] 2026-03-02 12:33:37,661 | INFO     | left removable region: 30
[2026-03-02 13:34:37] 2026-03-02 12:33:37,661 | INFO     | sum of square deviations: 945282840.0
[2026-03-02 13:34:37] 2026-03-02 12:33:37,661 | INFO     | sum of deviations: 877405517.0
[2026-03-02 13:34:37] 2026-03-02 12:33:37,661 | INFO     | mean x: 1772449996.0
[2026-03-02 13:34:37] 2026-03-02 12:33:37,661 | INFO     | mean y: 2350756.103448276
[2026-03-02 13:34:37] 2026-03-02 12:33:37,661 | INFO     | intersect: -1642826051.609498
[2026-03-02 13:34:37] 2026-03-02 12:33:37,662 | INFO     | chi2: 0.0003675696825801573
[2026-03-02 13:34:37] 2026-03-02 12:33:37,662 | INFO     | current memory leak: 0.93 B/s (using 145 data points, chi2=0.00)
[2026-03-02 13:34:37] 2026-03-02 12:33:37,662 | INFO     | could have reported an average CPU frequency of 3600 MHz (10 samples)
[2026-03-02 13:34:37] 2026-03-02 12:33:37,662 | INFO     | ..............................
[2026-03-02 13:34:37] 2026-03-02 12:33:37,662 | INFO     | . Timing measurements:
[2026-03-02 13:34:37] 2026-03-02 12:33:37,662 | INFO     | . get job = 0 s
[2026-03-02 13:34:37] 2026-03-02 12:33:37,662 | INFO     | . initial setup = 5 s
[2026-03-02 13:34:37] 2026-03-02 12:33:37,662 | INFO     | . payload setup = 4 s
[2026-03-02 13:34:37] 2026-03-02 12:33:37,662 | INFO     | . stage-in = 0 s
[2026-03-02 13:34:37] 2026-03-02 12:33:37,662 | INFO     | . payload execution = 11044 s
[2026-03-02 13:34:37] 2026-03-02 12:33:37,662 | INFO     | . stage-out = 0 s
[2026-03-02 13:34:37] 2026-03-02 12:33:37,662 | INFO     | . log creation = 0 s
[2026-03-02 13:34:37] 2026-03-02 12:33:37,662 | INFO     | ..............................
[2026-03-02 13:34:37] 2026-03-02 12:33:37,989 | INFO     | 
[2026-03-02 13:34:37] 2026-03-02 12:33:37,990 | INFO     | job summary report
[2026-03-02 13:34:37] 2026-03-02 12:33:37,990 | INFO     | --------------------------------------------------
[2026-03-02 13:34:37] 2026-03-02 12:33:37,990 | INFO     | PanDA job id: 7035002545
[2026-03-02 13:34:37] 2026-03-02 12:33:37,990 | INFO     | task id: 48845018
[2026-03-02 13:34:37] 2026-03-02 12:33:37,990 | INFO     | errors: (none)
[2026-03-02 13:34:37] 2026-03-02 12:33:37,990 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-02 13:34:37] 2026-03-02 12:33:37,990 | INFO     | pilot state: finished 
[2026-03-02 13:34:37] 2026-03-02 12:33:37,990 | INFO     | transexitcode: 0
[2026-03-02 13:34:37] 2026-03-02 12:33:37,990 | INFO     | exeerrorcode: 0
[2026-03-02 13:34:37] 2026-03-02 12:33:37,990 | INFO     | exeerrordiag: 
[2026-03-02 13:34:37] 2026-03-02 12:33:37,990 | INFO     | exitcode: 0
[2026-03-02 13:34:37] 2026-03-02 12:33:37,990 | INFO     | exitmsg: OK
[2026-03-02 13:34:37] 2026-03-02 12:33:37,990 | INFO     | cpuconsumptiontime: 42513 s
[2026-03-02 13:34:37] 2026-03-02 12:33:37,990 | INFO     | nevents: 400
[2026-03-02 13:34:37] 2026-03-02 12:33:37,990 | INFO     | neventsw: 0
[2026-03-02 13:34:37] 2026-03-02 12:33:37,990 | INFO     | pid: 2180295
[2026-03-02 13:34:37] 2026-03-02 12:33:37,990 | INFO     | pgrp: 2180295
[2026-03-02 13:34:37] 2026-03-02 12:33:37,990 | INFO     | corecount: 4
[2026-03-02 13:34:37] 2026-03-02 12:33:37,990 | INFO     | event service: False
[2026-03-02 13:34:37] 2026-03-02 12:33:37,990 | INFO     | sizes: {0: 2282360, 10: 2282360, 11052: 2311568, 11053: 2320784}
[2026-03-02 13:34:37] 2026-03-02 12:33:37,990 | INFO     | --------------------------------------------------
[2026-03-02 13:34:37] 2026-03-02 12:33:37,990 | INFO     | 
[2026-03-02 13:34:37] 2026-03-02 12:33:37,990 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot180/slots/0
[2026-03-02 13:34:37] 2026-03-02 12:33:38,010 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-02 13:34:37] 2026-03-02 12:33:38,010 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-02 13:34:37] 2026-03-02 12:33:38,010 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-02 13:34:37] 2026-03-02 12:33:38,010 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-02 13:34:37] 2026-03-02 12:33:38,010 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-02 13:34:37] 2026-03-02 12:33:38,010 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-02 13:34:37] 2026-03-02 12:33:38,010 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-02 13:34:37] 2026-03-02 12:33:38,010 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-02 13:34:37] 2026-03-02 12:33:38,010 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-02 13:34:37] 2026-03-02 12:33:38,011 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-02 13:34:37] 2026-03-02 12:33:38,011 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-02 13:34:37] 2026-03-02 12:33:38,011 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-02 13:34:37] 2026-03-02 12:33:38,011 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-02 13:34:37] 2026-03-02 12:33:38,011 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-02 13:34:37] 2026-03-02 12:33:38,011 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-02 13:34:37] 2026-03-02 12:33:38,011 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-02 13:34:37] 2026-03-02 12:33:38,011 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-02 13:34:37] 2026-03-02 12:33:38,011 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-02 13:34:37] 2026-03-02 12:33:38,011 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-02 13:34:37] 2026-03-02 12:33:38,011 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-02 13:34:37] 2026-03-02 12:33:38,011 | INFO     | job 7035002545 has completed (purged errors)
[2026-03-02 13:34:37] 2026-03-02 12:33:38,011 | INFO     | overall cleanup function is called
[2026-03-02 13:34:37] 2026-03-02 12:33:38,141 | WARNING  | process 2180295 can no longer be monitored (due to stat problems) - aborting
[2026-03-02 13:34:37] 2026-03-02 12:33:38,429 | INFO     | using path: /var/lib/boinc/var/slot180/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-02 13:34:37] 2026-03-02 12:33:38,896 | INFO     | number of running child processes to parent process 2180295: 1
[2026-03-02 13:34:37] 2026-03-02 12:33:38,896 | INFO     | maximum number of monitored processes: 6
[2026-03-02 13:34:37] 2026-03-02 12:33:38,896 | INFO     | aborting job monitoring since job object (job id=7035002545) has expired
[2026-03-02 13:34:37] 2026-03-02 12:33:39,017 | INFO     | --- collectZombieJob: --- 10, [2180295]
[2026-03-02 13:34:37] 2026-03-02 12:33:39,018 | INFO     | zombie collector waiting for pid 2180295
[2026-03-02 13:34:37] 2026-03-02 12:33:39,018 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-02 13:34:37] 2026-03-02 12:33:39,018 | INFO     | collected zombie processes
[2026-03-02 13:34:37] 2026-03-02 12:33:39,018 | INFO     | will attempt to kill all subprocesses of pid=2180295
[2026-03-02 13:34:37] 2026-03-02 12:33:39,476 | INFO     | process IDs to be killed: [2180295] (in reverse order)
[2026-03-02 13:34:37] 2026-03-02 12:33:39,695 | WARNING  | found no corresponding commands to process id(s)
[2026-03-02 13:34:37] 2026-03-02 12:33:39,696 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-02 13:34:37] 2026-03-02 12:33:39,723 | INFO     | did not find any defunct processes belonging to 2180295
[2026-03-02 13:34:37] 2026-03-02 12:33:39,746 | INFO     | did not find any defunct processes belonging to 2180295
[2026-03-02 13:34:37] 2026-03-02 12:33:39,747 | INFO     | ready for new job
[2026-03-02 13:34:37] 2026-03-02 12:33:39,747 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-02 13:34:37] 2026-03-02 12:33:39,748 | INFO     | **************************************
[2026-03-02 13:34:37] 2026-03-02 12:33:39,748 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-02 13:34:37] 2026-03-02 12:33:39,748 | INFO     | **************************************
[2026-03-02 13:34:37] 2026-03-02 12:33:39,748 | INFO     | 
[2026-03-02 13:34:37] 2026-03-02 12:33:39,751 | INFO     | architecture information:
[2026-03-02 13:34:37] 2026-03-02 12:33:39,751 | INFO     | executing command: cat /etc/os-release
[2026-03-02 13:34:37] 2026-03-02 12:33:39,765 | INFO     | cat /etc/os-release:
[2026-03-02 13:34:37] NAME="CentOS Linux"
[2026-03-02 13:34:37] VERSION="7 (Core)"
[2026-03-02 13:34:37] ID="centos"
[2026-03-02 13:34:37] ID_LIKE="rhel fedora"
[2026-03-02 13:34:37] VERSION_ID="7"
[2026-03-02 13:34:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-02 13:34:37] ANSI_COLOR="0;31"
[2026-03-02 13:34:37] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-02 13:34:37] HOME_URL="https://www.centos.org/"
[2026-03-02 13:34:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-02 13:34:37] 
[2026-03-02 13:34:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-02 13:34:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-02 13:34:37] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-02 13:34:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-02 13:34:37] 
[2026-03-02 13:34:37] 2026-03-02 12:33:39,766 | INFO     | **************************************
[2026-03-02 13:34:37] 2026-03-02 12:33:40,268 | INFO     | executing command: df -mP /var/lib/boinc/var/slot180/slots/0
[2026-03-02 13:34:37] 2026-03-02 12:33:40,285 | INFO     | sufficient remaining disk space (20612907008 B)
[2026-03-02 13:34:37] 2026-03-02 12:33:40,285 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-02 13:34:37] 2026-03-02 12:33:40,286 | INFO     | current server update state: UPDATING_FINAL
[2026-03-02 13:34:37] 2026-03-02 12:33:40,286 | INFO     | update_server=False
[2026-03-02 13:34:37] 2026-03-02 12:33:40,286 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-02 13:34:37] 2026-03-02 12:33:40,286 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-02 13:34:37] 2026-03-02 12:33:40,286 | INFO     | aborting loop
[2026-03-02 13:34:37] 2026-03-02 12:33:40,564 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-02 13:34:37] 2026-03-02 12:33:40,820 | INFO     | all payload control threads have been joined
[2026-03-02 13:34:37] 2026-03-02 12:33:41,049 | INFO     | all data control threads have been joined
[2026-03-02 13:34:37] 2026-03-02 12:33:41,288 | INFO     | [job] job monitor thread has finished
[2026-03-02 13:34:37] 2026-03-02 12:33:41,291 | INFO     | [job] retrieve thread has finished
[2026-03-02 13:34:37] 2026-03-02 12:33:41,438 | INFO     | all job control threads have been joined
[2026-03-02 13:34:37] 2026-03-02 12:33:41,656 | INFO     | [job] create_data_payload thread has finished
[2026-03-02 13:34:37] 2026-03-02 12:33:41,762 | INFO     | [job] validate thread has finished
[2026-03-02 13:34:37] 2026-03-02 12:33:41,826 | INFO     | [payload] control thread has finished
[2026-03-02 13:34:37] 2026-03-02 12:33:42,054 | INFO     | [data] control thread has finished
[2026-03-02 13:34:37] 2026-03-02 12:33:42,234 | INFO     | [payload] execute_payloads thread has finished
[2026-03-02 13:34:37] 2026-03-02 12:33:42,248 | INFO     | [payload] validate_pre thread has finished
[2026-03-02 13:34:37] 2026-03-02 12:33:42,298 | INFO     | [payload] failed_post thread has finished
[2026-03-02 13:34:37] 2026-03-02 12:33:42,314 | INFO     | [data] copytool_in thread has finished
[2026-03-02 13:34:37] 2026-03-02 12:33:42,443 | INFO     | [job] control thread has finished
[2026-03-02 13:34:37] 2026-03-02 12:33:42,569 | INFO     | [data] copytool_out thread has finished
[2026-03-02 13:34:37] 2026-03-02 12:33:42,579 | INFO     | [payload] validate_post thread has finished
[2026-03-02 13:34:37] 2026-03-02 12:33:42,730 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-02 13:34:37] 2026-03-02 12:33:43,632 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-02 13:34:37] 2026-03-02 12:33:43,735 | INFO     | [job] queue monitor thread has finished
[2026-03-02 13:34:37] 2026-03-02 12:33:47,638 | INFO     | [data] queue_monitor thread has finished
[2026-03-02 13:34:37] 2026-03-02 12:33:50,592 | INFO     | job.realtimelogging is not enabled
[2026-03-02 13:34:37] 2026-03-02 12:33:51,597 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-02 13:34:37] 2026-03-02 12:34:10,219 | INFO     | PID=2167123 has CPU usage=7.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-02 13:34:37] 2026-03-02 12:34:10,219 | INFO     | .. there are 47 such processes running
[2026-03-02 13:34:37] 2026-03-02 12:34:10,220 | INFO     | found 0 job(s) in 20 queues
[2026-03-02 13:34:37] 2026-03-02 12:34:10,220 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-02 13:34:37] 2026-03-02 12:34:10,220 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-02 13:34:37] 2026-03-02 12:34:31,611 | INFO     | [monitor] cgroup control has ended
[2026-03-02 13:34:37] 2026-03-02 12:34:32,518 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23116533995328)>', '<ExcThread(monitor, started 23116297553664)>']
[2026-03-02 13:34:37] 2026-03-02 12:34:33,334 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-02 13:34:37] 2026-03-02 12:34:33,335 | INFO     | [monitor] control thread has ended
[2026-03-02 13:34:37] 2026-03-02 12:34:37,543 | INFO     | all workflow threads have been joined
[2026-03-02 13:34:37] 2026-03-02 12:34:37,544 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-02 13:34:37] 2026-03-02 12:34:37,544 | INFO     | traces error code: 0
[2026-03-02 13:34:37] 2026-03-02 12:34:37,544 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-02 13:34:37] 2026-03-02 12:34:37,680 [wrapper] ==== pilot stdout END ====
[2026-03-02 13:34:37] 2026-03-02 12:34:37,683 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-02 13:34:37] 2026-03-02 12:34:37,685 [wrapper] pilotpid: 2167123
[2026-03-02 13:34:37] 2026-03-02 12:34:37,687 [wrapper] Pilot exit status: 0
[2026-03-02 13:34:37] 2026-03-02 12:34:37,696 [wrapper] pandaids: 7035002545
[2026-03-02 13:34:37] 2026-03-02 12:34:37,830 [wrapper] cleanup supervisor_pilot 3840907 2167124
[2026-03-02 13:34:37] 2026-03-02 12:34:37,832 [wrapper] Test setup, not cleaning
[2026-03-02 13:34:37] 2026-03-02 12:34:37,835 [wrapper] apfmon messages muted
[2026-03-02 13:34:37] 2026-03-02 12:34:37,837 [wrapper] ==== wrapper stdout END ====
[2026-03-02 13:34:37] 2026-03-02 12:34:37,839 [wrapper] ==== wrapper stderr END ====
[2026-03-02 13:34:37]  *** Error codes and diagnostics ***
[2026-03-02 13:34:37]     "exeErrorCode": 0,
[2026-03-02 13:34:37]     "exeErrorDiag": "",
[2026-03-02 13:34:37]     "pilotErrorCode": 0,
[2026-03-02 13:34:37]     "pilotErrorDiag": "",
[2026-03-02 13:34:37]  *** Listing of results directory ***
[2026-03-02 13:34:37] total 476320
[2026-03-02 13:34:37] -rw-r--r--. 1 boinc boinc    584627 Mar  1 13:02 pilot3.tar.gz
[2026-03-02 13:34:37] -rwx------. 1 boinc boinc     36322 Mar  1 13:02 runpilot2-wrapper.sh
[2026-03-02 13:34:37] -rw-r--r--. 1 boinc boinc      5111 Mar  1 13:03 queuedata.json
[2026-03-02 13:34:37] -rw-r--r--. 1 boinc boinc       100 Mar  2 10:28 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-02 13:34:37] -rwxr-xr-x. 1 boinc boinc      7986 Mar  2 10:28 run_atlas
[2026-03-02 13:34:37] -rw-r--r--. 1 boinc boinc       105 Mar  2 10:28 job.xml
[2026-03-02 13:34:37] -rw-r--r--. 1 boinc boinc      6705 Mar  2 10:29 init_data.xml
[2026-03-02 13:34:37] -rw-r--r--. 2 boinc boinc 239755217 Mar  2 10:29 EVNT.48632687._000001.pool.root.1
[2026-03-02 13:34:37] -rw-r--r--. 2 boinc boinc     15845 Mar  2 10:29 start_atlas.sh
[2026-03-02 13:34:37] drwxrwx--x. 2 boinc boinc      4096 Mar  2 10:29 shared
[2026-03-02 13:34:37] -rw-r--r--. 2 boinc boinc    597953 Mar  2 10:29 input.tar.gz
[2026-03-02 13:34:37] -rw-r--r--. 1 boinc boinc         0 Mar  2 10:29 boinc_lockfile
[2026-03-02 13:34:37] -rw-r--r--. 1 boinc boinc      2621 Mar  2 10:29 pandaJob.out
[2026-03-02 13:34:37] -rw-------. 1 boinc boinc    997501 Mar  2 10:29 agis_schedconf.cvmfs.json
[2026-03-02 13:34:37] -rw-------. 1 boinc boinc       445 Mar  2 10:29 workernode_map.json
[2026-03-02 13:34:37] drwx------. 5 boinc boinc      4096 Mar  2 10:29 pilot3
[2026-03-02 13:34:37] -rw-------. 1 boinc boinc 240254143 Mar  2 13:33 HITS.48845018._000002.pool.root.1
[2026-03-02 13:34:37] -rw-r--r--. 1 boinc boinc       530 Mar  2 13:33 boinc_task_state.xml
[2026-03-02 13:34:37] -rw-------. 1 boinc boinc      1045 Mar  2 13:33 memory_monitor_summary.json
[2026-03-02 13:34:37] -rw-------. 1 boinc boinc   1513015 Mar  2 13:33 agis_ddmendpoints.agis.ALL.json
[2026-03-02 13:34:37] -rw-------. 1 boinc boinc    348025 Mar  2 13:33 log.48845018._000002.job.log.tgz.1
[2026-03-02 13:34:37] -rw-------. 1 boinc boinc      6347 Mar  2 13:33 heartbeat.json
[2026-03-02 13:34:37] -rw-r--r--. 1 boinc boinc      8192 Mar  2 13:34 boinc_mmap_file
[2026-03-02 13:34:37] -rw-r--r--. 1 boinc boinc        28 Mar  2 13:34 wrapper_checkpoint.txt
[2026-03-02 13:34:37] -rw-------. 1 boinc boinc        95 Mar  2 13:34 pilot_heartbeat.json
[2026-03-02 13:34:37] -rw-------. 1 boinc boinc      4902 Mar  2 13:34 pilotlog.txt
[2026-03-02 13:34:37] -rw-------. 1 boinc boinc   1563762 Mar  2 13:34 log.48845018._000002.job.log.1
[2026-03-02 13:34:37] -rw-------. 1 boinc boinc       357 Mar  2 13:34 output.list
[2026-03-02 13:34:37] -rw-r--r--. 1 boinc boinc       620 Mar  2 13:34 runtime_log
[2026-03-02 13:34:37] -rw-------. 1 boinc boinc   1925120 Mar  2 13:34 result.tar.gz
[2026-03-02 13:34:37] -rw-r--r--. 1 boinc boinc      9222 Mar  2 13:34 runtime_log.err
[2026-03-02 13:34:37] -rw-------. 1 boinc boinc       665 Mar  2 13:34 YQGNDmnguG9n9Rq4apOajLDm4fhM0noT9bVooX4SDmCJ8KDm1R7dEo.diag
[2026-03-02 13:34:37] -rw-r--r--. 1 boinc boinc     20834 Mar  2 13:34 stderr.txt
[2026-03-02 13:34:37] HITS file was successfully produced:
[2026-03-02 13:34:37] -rw-------. 1 boinc boinc 240254143 Mar  2 13:33 shared/HITS.pool.root.1
[2026-03-02 13:34:37]  *** Contents of shared directory: ***
[2026-03-02 13:34:37] total 471248
[2026-03-02 13:34:37] -rw-r--r--. 2 boinc boinc 239755217 Mar  2 10:29 ATLAS.root_0
[2026-03-02 13:34:37] -rw-r--r--. 2 boinc boinc     15845 Mar  2 10:29 start_atlas.sh
[2026-03-02 13:34:37] -rw-r--r--. 2 boinc boinc    597953 Mar  2 10:29 input.tar.gz
[2026-03-02 13:34:37] -rw-------. 1 boinc boinc 240254143 Mar  2 13:33 HITS.pool.root.1
[2026-03-02 13:34:37] -rw-------. 1 boinc boinc   1925120 Mar  2 13:34 result.tar.gz
13:34:39 (2156818): run_atlas exited; CPU time 43031.621498
13:34:39 (2156818): called boinc_finish(0)

</stderr_txt>
]]>

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