Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
07:07:42 (872040): wrapper (7.7.26015): starting
07:07:42 (872040): wrapper: running run_atlas (--nthreads 4)
[2026-03-02 07:07:42] Arguments: --nthreads 4
[2026-03-02 07:07:42] Threads: 4
[2026-03-02 07:07:42] Checking for CVMFS
[2026-03-02 07:07:42] No cvmfs_config command found, will try listing directly
[2026-03-02 07:07:42] CVMFS is ok
[2026-03-02 07:07:42] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-02 07:07:42] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-02 07:07:42] Further information can be found at the LHC@home message board.
[2026-03-02 07:07:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-02 07:07:42] Checking for apptainer binary...
[2026-03-02 07:07:42] which: no apptainer in ((null))
[2026-03-02 07:07:42] apptainer is not installed, using version from CVMFS
[2026-03-02 07:07:42] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-02 07:07:42] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot248/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut21.grid.cesnet.cz
[2026-03-02 07:07:42] apptainer works
[2026-03-02 07:07:42] Set ATHENA_PROC_NUMBER=4
[2026-03-02 07:07:42] Set ATHENA_CORE_NUMBER=4
[2026-03-02 07:07:42] Starting ATLAS job with PandaID=7034855121
[2026-03-02 07:07:42] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot248/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-02 08:16:08]  *** The last 200 lines of the pilot log: ***
[2026-03-02 08:16:08]  filetype=log
[2026-03-02 08:16:08]  guid=587e908a-7525-4218-ae7e-718edd0657ee
[2026-03-02 08:16:08]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-03-02 08:16:08]  is_altstaged=None
[2026-03-02 08:16:08]  is_tar=False
[2026-03-02 08:16:08]  lfn=log.48700946._002628.job.log.tgz.1
[2026-03-02 08:16:08]  mtime=0
[2026-03-02 08:16:08]  protocol_id=None
[2026-03-02 08:16:08]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-02 08:16:08]  replicas=None
[2026-03-02 08:16:08]  scope=mc23_13p6TeV
[2026-03-02 08:16:08]  status=None
[2026-03-02 08:16:08]  status_code=0
[2026-03-02 08:16:08]  storage_token=
[2026-03-02 08:16:08]  surl=/var/lib/boinc/var/slot248/slots/0/PanDA_Pilot-7034855121/log.48700946._002628.job.log.tgz.1
[2026-03-02 08:16:08]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/25/d9/log.48700946._002628.job.log.tgz.1
[2026-03-02 08:16:08]  workdir=None
[2026-03-02 08:16:08] ]
[2026-03-02 08:16:08] 2026-03-02 07:15:27,405 | INFO     | transferring file log.48700946._002628.job.log.tgz.1 from /var/lib/boinc/var/slot248/slots/0/PanDA_Pilot-7034855121/log.48700946._002628.job.log.tgz.1 to /var/lib/
[2026-03-02 08:16:08] 2026-03-02 07:15:27,405 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot248/slots/0/PanDA_Pilot-7034855121/log.48700946._002628.job.log.tgz.1 /var/lib/boinc/var/slot248/slots/0/
[2026-03-02 08:16:08] 2026-03-02 07:15:27,430 | INFO     | adding to output.list: log.48700946._002628.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/25/d9/log.48700946._002628.job.log.tg
[2026-03-02 08:16:08] 2026-03-02 07:15:27,430 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-02 08:16:08] 2026-03-02 07:15:27,430 | INFO     | summary of transferred files:
[2026-03-02 08:16:08] 2026-03-02 07:15:27,430 | INFO     |  -- lfn=log.48700946._002628.job.log.tgz.1, status_code=0, status=transferred
[2026-03-02 08:16:08] 2026-03-02 07:15:27,431 | INFO     | stage-out finished correctly
[2026-03-02 08:16:08] 2026-03-02 07:15:28,521 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-02 08:16:08] 2026-03-02 07:15:28,918 | INFO     | time since job start (4053s) is within the limit (349056.0s)
[2026-03-02 08:16:08] 2026-03-02 07:15:29,439 | INFO     | monitor loop #296: job 0:7034855121 is in state 'finished'
[2026-03-02 08:16:08] 2026-03-02 07:15:29,439 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-02 08:16:08] 2026-03-02 07:15:30,009 | INFO     | job 7034855121 has state=finished
[2026-03-02 08:16:08] 2026-03-02 07:15:30,009 | INFO     | preparing for final server update for job 7034855121 in state='finished'
[2026-03-02 08:16:08] 2026-03-02 07:15:30,009 | INFO     | reading metadata from: /var/lib/boinc/var/slot248/slots/0/PanDA_Pilot-7034855121/jobReport.json
[2026-03-02 08:16:08] 2026-03-02 07:15:30,010 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot248/slots/0/workernode_map.json
[2026-03-02 08:16:08] 2026-03-02 07:15:30,011 | INFO     | this job has now completed (state=finished)
[2026-03-02 08:16:08] 2026-03-02 07:15:30,011 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-02 08:16:08] 2026-03-02 07:15:30,011 | INFO     | log transfer has been attempted: DONE
[2026-03-02 08:16:08] 2026-03-02 07:15:30,011 | INFO     | job 7034855121 has finished - writing final server update
[2026-03-02 08:16:08] 2026-03-02 07:15:30,011 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_18346/.job.ad'
[2026-03-02 08:16:08] 2026-03-02 07:15:30,011 | INFO     | total number of processed events: 400 (read)
[2026-03-02 08:16:08] 2026-03-02 07:15:30,029 | INFO     | using path: /var/lib/boinc/var/slot248/slots/0/PanDA_Pilot-7034855121/memory_monitor_summary.json (trf name=prmon)
[2026-03-02 08:16:08] 2026-03-02 07:15:30,029 | INFO     | extracted standard info from prmon json
[2026-03-02 08:16:08] 2026-03-02 07:15:30,029 | INFO     | extracted standard memory fields from prmon json
[2026-03-02 08:16:08] 2026-03-02 07:15:30,029 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-02 08:16:08] 2026-03-02 07:15:30,029 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-02 08:16:08] 2026-03-02 07:15:30,029 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-02 08:16:08] 2026-03-02 07:15:30,030 | INFO     | fitting pss+swap vs Time
[2026-03-02 08:16:08] 2026-03-02 07:15:30,030 | INFO     | sum of square deviations: 66959395.0
[2026-03-02 08:16:08] 2026-03-02 07:15:30,031 | INFO     | sum of deviations: 426192542.99999976
[2026-03-02 08:16:08] 2026-03-02 07:15:30,031 | INFO     | mean x: 1772433800.5
[2026-03-02 08:16:08] 2026-03-02 07:15:30,031 | INFO     | mean y: 2308194.8333333335
[2026-03-02 08:16:08] 2026-03-02 07:15:30,031 | INFO     | intersect: -11279126900.783184
[2026-03-02 08:16:08] 2026-03-02 07:15:30,031 | INFO     | chi2: 9.40568169459934e-05
[2026-03-02 08:16:08] 2026-03-02 07:15:30,031 | INFO     | current memory leak: 6.36 B/s (using 60 data points, chi2=0.00)
[2026-03-02 08:16:08] 2026-03-02 07:15:30,031 | INFO     | could have reported an average CPU frequency of 3594 MHz (6 samples)
[2026-03-02 08:16:08] 2026-03-02 07:15:30,031 | INFO     | ..............................
[2026-03-02 08:16:08] 2026-03-02 07:15:30,031 | INFO     | . Timing measurements:
[2026-03-02 08:16:08] 2026-03-02 07:15:30,031 | INFO     | . get job = 0 s
[2026-03-02 08:16:08] 2026-03-02 07:15:30,031 | INFO     | . initial setup = 5 s
[2026-03-02 08:16:08] 2026-03-02 07:15:30,031 | INFO     | . payload setup = 5 s
[2026-03-02 08:16:08] 2026-03-02 07:15:30,031 | INFO     | . stage-in = 0 s
[2026-03-02 08:16:08] 2026-03-02 07:15:30,031 | INFO     | . payload execution = 4032 s
[2026-03-02 08:16:08] 2026-03-02 07:15:30,031 | INFO     | . stage-out = 0 s
[2026-03-02 08:16:08] 2026-03-02 07:15:30,031 | INFO     | . log creation = 0 s
[2026-03-02 08:16:08] 2026-03-02 07:15:30,031 | INFO     | ..............................
[2026-03-02 08:16:08] 2026-03-02 07:15:30,077 | INFO     | 
[2026-03-02 08:16:08] 2026-03-02 07:15:30,077 | INFO     | job summary report
[2026-03-02 08:16:08] 2026-03-02 07:15:30,077 | INFO     | --------------------------------------------------
[2026-03-02 08:16:08] 2026-03-02 07:15:30,077 | INFO     | PanDA job id: 7034855121
[2026-03-02 08:16:08] 2026-03-02 07:15:30,077 | INFO     | task id: 48700946
[2026-03-02 08:16:08] 2026-03-02 07:15:30,078 | INFO     | errors: (none)
[2026-03-02 08:16:08] 2026-03-02 07:15:30,078 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-02 08:16:08] 2026-03-02 07:15:30,078 | INFO     | pilot state: finished 
[2026-03-02 08:16:08] 2026-03-02 07:15:30,078 | INFO     | transexitcode: 0
[2026-03-02 08:16:08] 2026-03-02 07:15:30,078 | INFO     | exeerrorcode: 0
[2026-03-02 08:16:08] 2026-03-02 07:15:30,078 | INFO     | exeerrordiag: 
[2026-03-02 08:16:08] 2026-03-02 07:15:30,078 | INFO     | exitcode: 0
[2026-03-02 08:16:08] 2026-03-02 07:15:30,078 | INFO     | exitmsg: OK
[2026-03-02 08:16:08] 2026-03-02 07:15:30,078 | INFO     | cpuconsumptiontime: 15302 s
[2026-03-02 08:16:08] 2026-03-02 07:15:30,078 | INFO     | nevents: 400
[2026-03-02 08:16:08] 2026-03-02 07:15:30,078 | INFO     | neventsw: 0
[2026-03-02 08:16:08] 2026-03-02 07:15:30,078 | INFO     | pid: 890703
[2026-03-02 08:16:08] 2026-03-02 07:15:30,078 | INFO     | pgrp: 890703
[2026-03-02 08:16:08] 2026-03-02 07:15:30,078 | INFO     | corecount: 4
[2026-03-02 08:16:08] 2026-03-02 07:15:30,078 | INFO     | event service: False
[2026-03-02 08:16:08] 2026-03-02 07:15:30,078 | INFO     | sizes: {0: 2281944, 1: 2282206, 11: 2282234, 4041: 2317122, 4042: 2317122, 4044: 2317316}
[2026-03-02 08:16:08] 2026-03-02 07:15:30,078 | INFO     | --------------------------------------------------
[2026-03-02 08:16:08] 2026-03-02 07:15:30,078 | INFO     | 
[2026-03-02 08:16:08] 2026-03-02 07:15:30,078 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot248/slots/0
[2026-03-02 08:16:08] 2026-03-02 07:15:30,095 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-02 08:16:08] 2026-03-02 07:15:30,095 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-02 08:16:08] 2026-03-02 07:15:30,095 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-02 08:16:08] 2026-03-02 07:15:30,095 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-02 08:16:08] 2026-03-02 07:15:30,095 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-02 08:16:08] 2026-03-02 07:15:30,095 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-02 08:16:08] 2026-03-02 07:15:30,095 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-02 08:16:08] 2026-03-02 07:15:30,095 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-02 08:16:08] 2026-03-02 07:15:30,095 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-02 08:16:08] 2026-03-02 07:15:30,095 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-02 08:16:08] 2026-03-02 07:15:30,095 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-02 08:16:08] 2026-03-02 07:15:30,095 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-02 08:16:08] 2026-03-02 07:15:30,095 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-02 08:16:08] 2026-03-02 07:15:30,095 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-02 08:16:08] 2026-03-02 07:15:30,095 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-02 08:16:08] 2026-03-02 07:15:30,096 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-02 08:16:08] 2026-03-02 07:15:30,096 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-02 08:16:08] 2026-03-02 07:15:30,096 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-02 08:16:08] 2026-03-02 07:15:30,096 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-02 08:16:08] 2026-03-02 07:15:30,096 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-02 08:16:08] 2026-03-02 07:15:30,096 | INFO     | job 7034855121 has completed (purged errors)
[2026-03-02 08:16:08] 2026-03-02 07:15:30,096 | INFO     | overall cleanup function is called
[2026-03-02 08:16:08] 2026-03-02 07:15:31,102 | INFO     | --- collectZombieJob: --- 10, [890703]
[2026-03-02 08:16:08] 2026-03-02 07:15:31,103 | INFO     | zombie collector waiting for pid 890703
[2026-03-02 08:16:08] 2026-03-02 07:15:31,103 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-02 08:16:08] 2026-03-02 07:15:31,103 | INFO     | collected zombie processes
[2026-03-02 08:16:08] 2026-03-02 07:15:31,103 | INFO     | will attempt to kill all subprocesses of pid=890703
[2026-03-02 08:16:08] 2026-03-02 07:15:31,522 | INFO     | process IDs to be killed: [890703] (in reverse order)
[2026-03-02 08:16:08] 2026-03-02 07:15:31,732 | WARNING  | found no corresponding commands to process id(s)
[2026-03-02 08:16:08] 2026-03-02 07:15:31,733 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-02 08:16:08] 2026-03-02 07:15:31,764 | INFO     | did not find any defunct processes belonging to 890703
[2026-03-02 08:16:08] 2026-03-02 07:15:31,793 | INFO     | did not find any defunct processes belonging to 890703
[2026-03-02 08:16:08] 2026-03-02 07:15:31,794 | INFO     | ready for new job
[2026-03-02 08:16:08] 2026-03-02 07:15:31,794 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-02 08:16:08] 2026-03-02 07:15:31,795 | INFO     | **************************************
[2026-03-02 08:16:08] 2026-03-02 07:15:31,795 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-02 08:16:08] 2026-03-02 07:15:31,795 | INFO     | **************************************
[2026-03-02 08:16:08] 2026-03-02 07:15:31,795 | INFO     | 
[2026-03-02 08:16:08] 2026-03-02 07:15:31,801 | INFO     | architecture information:
[2026-03-02 08:16:08] 2026-03-02 07:15:31,801 | INFO     | executing command: cat /etc/os-release
[2026-03-02 08:16:08] 2026-03-02 07:15:31,817 | INFO     | cat /etc/os-release:
[2026-03-02 08:16:08] NAME="CentOS Linux"
[2026-03-02 08:16:08] VERSION="7 (Core)"
[2026-03-02 08:16:08] ID="centos"
[2026-03-02 08:16:08] ID_LIKE="rhel fedora"
[2026-03-02 08:16:08] VERSION_ID="7"
[2026-03-02 08:16:08] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-02 08:16:08] ANSI_COLOR="0;31"
[2026-03-02 08:16:08] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-02 08:16:08] HOME_URL="https://www.centos.org/"
[2026-03-02 08:16:08] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-02 08:16:08] 
[2026-03-02 08:16:08] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-02 08:16:08] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-02 08:16:08] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-02 08:16:08] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-02 08:16:08] 
[2026-03-02 08:16:08] 2026-03-02 07:15:31,818 | INFO     | **************************************
[2026-03-02 08:16:08] 2026-03-02 07:15:32,320 | INFO     | executing command: df -mP /var/lib/boinc/var/slot248/slots/0
[2026-03-02 08:16:08] 2026-03-02 07:15:32,333 | INFO     | sufficient remaining disk space (20472397824 B)
[2026-03-02 08:16:08] 2026-03-02 07:15:32,334 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-02 08:16:08] 2026-03-02 07:15:32,334 | INFO     | current server update state: UPDATING_FINAL
[2026-03-02 08:16:08] 2026-03-02 07:15:32,334 | INFO     | update_server=False
[2026-03-02 08:16:08] 2026-03-02 07:15:32,334 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-02 08:16:08] 2026-03-02 07:15:32,608 | INFO     | all data control threads have been joined
[2026-03-02 08:16:08] 2026-03-02 07:15:32,948 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-02 08:16:08] 2026-03-02 07:15:32,948 | INFO     | aborting loop
[2026-03-02 08:16:08] 2026-03-02 07:15:32,991 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-02 08:16:08] 2026-03-02 07:15:33,212 | INFO     | all job control threads have been joined
[2026-03-02 08:16:08] 2026-03-02 07:15:33,339 | INFO     | [job] retrieve thread has finished
[2026-03-02 08:16:08] 2026-03-02 07:15:33,388 | INFO     | [payload] validate_pre thread has finished
[2026-03-02 08:16:08] 2026-03-02 07:15:33,439 | INFO     | [job] validate thread has finished
[2026-03-02 08:16:08] 2026-03-02 07:15:33,440 | INFO     | [job] create_data_payload thread has finished
[2026-03-02 08:16:08] 2026-03-02 07:15:33,461 | INFO     | all payload control threads have been joined
[2026-03-02 08:16:08] 2026-03-02 07:15:33,585 | INFO     | [data] copytool_in thread has finished
[2026-03-02 08:16:08] 2026-03-02 07:15:33,613 | INFO     | [data] control thread has finished
[2026-03-02 08:16:08] 2026-03-02 07:15:33,905 | INFO     | [payload] execute_payloads thread has finished
[2026-03-02 08:16:08] 2026-03-02 07:15:33,953 | INFO     | [job] job monitor thread has finished
[2026-03-02 08:16:08] 2026-03-02 07:15:34,218 | INFO     | [job] control thread has finished
[2026-03-02 08:16:08] 2026-03-02 07:15:34,333 | INFO     | [payload] validate_post thread has finished
[2026-03-02 08:16:08] 2026-03-02 07:15:34,467 | INFO     | [payload] control thread has finished
[2026-03-02 08:16:08] 2026-03-02 07:15:34,486 | INFO     | [payload] failed_post thread has finished
[2026-03-02 08:16:08] 2026-03-02 07:15:34,581 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-02 08:16:08] 2026-03-02 07:15:34,996 | INFO     | [data] copytool_out thread has finished
[2026-03-02 08:16:08] 2026-03-02 07:15:35,087 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-02 08:16:08] 2026-03-02 07:15:36,093 | INFO     | [job] queue monitor thread has finished
[2026-03-02 08:16:08] 2026-03-02 07:15:38,586 | INFO     | [data] queue_monitor thread has finished
[2026-03-02 08:16:08] 2026-03-02 07:15:42,736 | INFO     | job.realtimelogging is not enabled
[2026-03-02 08:16:08] 2026-03-02 07:15:43,741 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-02 08:16:08] 2026-03-02 07:16:01,489 | INFO     | [monitor] cgroup control has ended
[2026-03-02 08:16:08] 2026-03-02 07:16:02,547 | INFO     | PID=878493 has CPU usage=6.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-02 08:16:08] 2026-03-02 07:16:02,547 | INFO     | .. there are 43 such processes running
[2026-03-02 08:16:08] 2026-03-02 07:16:02,547 | INFO     | found 0 job(s) in 20 queues
[2026-03-02 08:16:08] 2026-03-02 07:16:02,547 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-02 08:16:08] 2026-03-02 07:16:02,547 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-02 08:16:08] 2026-03-02 07:16:03,452 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22763687753536)>', '<ExcThread(monitor, started 22763447527168)>']
[2026-03-02 08:16:08] 2026-03-02 07:16:03,551 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-02 08:16:08] 2026-03-02 07:16:03,552 | INFO     | [monitor] control thread has ended
[2026-03-02 08:16:08] 2026-03-02 07:16:08,477 | INFO     | all workflow threads have been joined
[2026-03-02 08:16:08] 2026-03-02 07:16:08,477 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-02 08:16:08] 2026-03-02 07:16:08,477 | INFO     | traces error code: 0
[2026-03-02 08:16:08] 2026-03-02 07:16:08,477 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-02 08:16:08] 2026-03-02 07:16:08,606 [wrapper] ==== pilot stdout END ====
[2026-03-02 08:16:08] 2026-03-02 07:16:08,608 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-02 08:16:08] 2026-03-02 07:16:08,610 [wrapper] pilotpid: 878493
[2026-03-02 08:16:08] 2026-03-02 07:16:08,612 [wrapper] Pilot exit status: 0
[2026-03-02 08:16:08] 2026-03-02 07:16:08,619 [wrapper] pandaids: 7034855121
[2026-03-02 08:16:08] 2026-03-02 07:16:08,749 [wrapper] cleanup supervisor_pilot 1426422 878494
[2026-03-02 08:16:08] 2026-03-02 07:16:08,751 [wrapper] Test setup, not cleaning
[2026-03-02 08:16:08] 2026-03-02 07:16:08,753 [wrapper] apfmon messages muted
[2026-03-02 08:16:08] 2026-03-02 07:16:08,755 [wrapper] ==== wrapper stdout END ====
[2026-03-02 08:16:08] 2026-03-02 07:16:08,757 [wrapper] ==== wrapper stderr END ====
[2026-03-02 08:16:08]  *** Error codes and diagnostics ***
[2026-03-02 08:16:08]     "exeErrorCode": 0,
[2026-03-02 08:16:08]     "exeErrorDiag": "",
[2026-03-02 08:16:08]     "pilotErrorCode": 0,
[2026-03-02 08:16:08]     "pilotErrorDiag": "",
[2026-03-02 08:16:08]  *** Listing of results directory ***
[2026-03-02 08:16:08] total 334488
[2026-03-02 08:16:08] -rw-r--r--. 1 boinc boinc    584627 Mar  1 11:14 pilot3.tar.gz
[2026-03-02 08:16:08] -rwx------. 1 boinc boinc     36322 Mar  1 11:17 runpilot2-wrapper.sh
[2026-03-02 08:16:08] -rw-r--r--. 1 boinc boinc      5111 Mar  1 11:20 queuedata.json
[2026-03-02 08:16:08] -rw-r--r--. 1 boinc boinc       100 Mar  2 07:07 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-02 08:16:08] -rwxr-xr-x. 1 boinc boinc      7986 Mar  2 07:07 run_atlas
[2026-03-02 08:16:08] -rw-r--r--. 1 boinc boinc       105 Mar  2 07:07 job.xml
[2026-03-02 08:16:08] -rw-r--r--. 1 boinc boinc      6705 Mar  2 07:07 init_data.xml
[2026-03-02 08:16:08] -rw-r--r--. 2 boinc boinc 189859986 Mar  2 07:07 EVNT.48700944._000103.pool.root.1
[2026-03-02 08:16:08] -rw-r--r--. 2 boinc boinc     15845 Mar  2 07:07 start_atlas.sh
[2026-03-02 08:16:08] drwxrwx--x. 2 boinc boinc      4096 Mar  2 07:07 shared
[2026-03-02 08:16:08] -rw-r--r--. 2 boinc boinc    597937 Mar  2 07:07 input.tar.gz
[2026-03-02 08:16:08] -rw-r--r--. 1 boinc boinc         0 Mar  2 07:07 boinc_lockfile
[2026-03-02 08:16:08] -rw-r--r--. 1 boinc boinc      2500 Mar  2 07:07 pandaJob.out
[2026-03-02 08:16:08] -rw-------. 1 boinc boinc    998242 Mar  2 07:07 agis_schedconf.cvmfs.json
[2026-03-02 08:16:08] -rw-------. 1 boinc boinc   1513015 Mar  2 07:07 agis_ddmendpoints.agis.ALL.json
[2026-03-02 08:16:08] -rw-------. 1 boinc boinc       442 Mar  2 07:07 workernode_map.json
[2026-03-02 08:16:08] drwx------. 5 boinc boinc      4096 Mar  2 07:07 pilot3
[2026-03-02 08:16:08] -rw-------. 1 boinc boinc        95 Mar  2 08:15 pilot_heartbeat.json
[2026-03-02 08:16:08] -rw-------. 1 boinc boinc 147017460 Mar  2 08:15 HITS.48700946._002628.pool.root.1
[2026-03-02 08:16:08] -rw-r--r--. 1 boinc boinc       529 Mar  2 08:15 boinc_task_state.xml
[2026-03-02 08:16:08] -rw-------. 1 boinc boinc      1029 Mar  2 08:15 memory_monitor_summary.json
[2026-03-02 08:16:08] -rw-------. 1 boinc boinc    253453 Mar  2 08:15 log.48700946._002628.job.log.tgz.1
[2026-03-02 08:16:08] -rw-------. 1 boinc boinc      6346 Mar  2 08:15 heartbeat.json
[2026-03-02 08:16:08] -rw-r--r--. 1 boinc boinc      8192 Mar  2 08:15 boinc_mmap_file
[2026-03-02 08:16:08] -rw-r--r--. 1 boinc boinc        27 Mar  2 08:15 wrapper_checkpoint.txt
[2026-03-02 08:16:08] -rw-------. 1 boinc boinc      4901 Mar  2 08:16 pilotlog.txt
[2026-03-02 08:16:08] -rw-------. 1 boinc boinc    603141 Mar  2 08:16 log.48700946._002628.job.log.1
[2026-03-02 08:16:08] -rw-------. 1 boinc boinc       357 Mar  2 08:16 output.list
[2026-03-02 08:16:08] -rw-r--r--. 1 boinc boinc       620 Mar  2 08:16 runtime_log
[2026-03-02 08:16:08] -rw-------. 1 boinc boinc    870400 Mar  2 08:16 result.tar.gz
[2026-03-02 08:16:08] -rw-r--r--. 1 boinc boinc      9221 Mar  2 08:16 runtime_log.err
[2026-03-02 08:16:08] -rw-------. 1 boinc boinc       662 Mar  2 08:16 GKMNDm42sG9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmnm9KDmYQffvn.diag
[2026-03-02 08:16:08] -rw-r--r--. 1 boinc boinc     21138 Mar  2 08:16 stderr.txt
[2026-03-02 08:16:08] HITS file was successfully produced:
[2026-03-02 08:16:08] -rw-------. 1 boinc boinc 147017460 Mar  2 08:15 shared/HITS.pool.root.1
[2026-03-02 08:16:08]  *** Contents of shared directory: ***
[2026-03-02 08:16:08] total 330444
[2026-03-02 08:16:08] -rw-r--r--. 2 boinc boinc 189859986 Mar  2 07:07 ATLAS.root_0
[2026-03-02 08:16:08] -rw-r--r--. 2 boinc boinc     15845 Mar  2 07:07 start_atlas.sh
[2026-03-02 08:16:08] -rw-r--r--. 2 boinc boinc    597937 Mar  2 07:07 input.tar.gz
[2026-03-02 08:16:08] -rw-------. 1 boinc boinc 147017460 Mar  2 08:15 HITS.pool.root.1
[2026-03-02 08:16:08] -rw-------. 1 boinc boinc    870400 Mar  2 08:16 result.tar.gz
08:16:09 (872040): run_atlas exited; CPU time 15485.766984
08:16:09 (872040): called boinc_finish(0)

</stderr_txt>
]]>

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