Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
15:56:43 (10418): wrapper (7.7.26015): starting
15:56:43 (10418): wrapper: running run_atlas (--nthreads 8)
[2026-03-01 15:56:43] Arguments: --nthreads 8
[2026-03-01 15:56:43] Threads: 8
[2026-03-01 15:56:43] Checking for CVMFS
[2026-03-01 15:56:43] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-01 15:56:43] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-01 15:56:43] Running cvmfs_config stat atlas.cern.ch
[2026-03-01 15:56:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-01 15:56:43] 2.11.0.0 4525 109094 84672 156772 0 50 2888103 4096000 0 130560 0 9138334 99.382 8039096 373 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://141.99.253.245:3128 1
[2026-03-01 15:56:43] CVMFS is ok
[2026-03-01 15:56:43] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-01 15:56:43] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-01 15:56:43] Further information can be found at the LHC@home message board.
[2026-03-01 15:56:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-01 15:56:43] Checking for apptainer binary...
[2026-03-01 15:56:43] /usr/bin/which: no apptainer in (/opt/ohpc/pub/libs/singularity/3.7.1/bin:/cm/shared/apps/slurm/current/sbin:/cm/shared/apps/slurm/current/bin:/home/mf493845/.local/bin:/home/mf493845/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin)
[2026-03-01 15:56:43] apptainer is not installed, using version from CVMFS
[2026-03-01 15:56:43] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-01 15:56:43] WARNING: Environment variable TMPDIR already has value [/tmp/job_11236144/atlas/pilot/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment hpc-node047
[2026-03-01 15:56:43] apptainer works
[2026-03-01 15:56:43] Set ATHENA_PROC_NUMBER=8
[2026-03-01 15:56:43] Set ATHENA_CORE_NUMBER=8
[2026-03-01 15:56:43] Starting ATLAS job with PandaID=7030264479
[2026-03-01 15:56:43] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/tmp/job_11236144/atlas/pilot/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-01 16:55:02]  *** The last 200 lines of the pilot log: ***
[2026-03-01 16:55:02]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-03-01 16:55:02]  is_altstaged=None
[2026-03-01 16:55:02]  is_tar=False
[2026-03-01 16:55:02]  lfn=log.48838591._000851.job.log.tgz.1
[2026-03-01 16:55:02]  mtime=0
[2026-03-01 16:55:02]  protocol_id=None
[2026-03-01 16:55:02]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-01 16:55:02]  replicas=None
[2026-03-01 16:55:02]  scope=mc23_13p6TeV
[2026-03-01 16:55:02]  status=None
[2026-03-01 16:55:02]  status_code=0
[2026-03-01 16:55:02]  storage_token=
[2026-03-01 16:55:02]  surl=/tmp/job_11236144/atlas/pilot/slots/0/PanDA_Pilot-7030264479/log.48838591._000851.job.log.tgz.1
[2026-03-01 16:55:02]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/24/fe/log.48838591._000851.job.log.tgz.1
[2026-03-01 16:55:02]  workdir=None
[2026-03-01 16:55:02] ]
[2026-03-01 16:55:02] 2026-03-01 15:54:15,122 | INFO     | transferring file log.48838591._000851.job.log.tgz.1 from /tmp/job_11236144/atlas/pilot/slots/0/PanDA_Pilot-7030264479/log.48838591._000851.job.log.tgz.1 to /tmp/j
[2026-03-01 16:55:02] 2026-03-01 15:54:15,122 | INFO     | executing command: /usr/bin/env mv /tmp/job_11236144/atlas/pilot/slots/0/PanDA_Pilot-7030264479/log.48838591._000851.job.log.tgz.1 /tmp/job_11236144/atlas/pilot/sl
[2026-03-01 16:55:02] 2026-03-01 15:54:15,131 | INFO     | adding to output.list: log.48838591._000851.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/24/fe/log.48838591._000851.job.log.tg
[2026-03-01 16:55:02] 2026-03-01 15:54:15,132 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-01 16:55:02] 2026-03-01 15:54:15,132 | INFO     | summary of transferred files:
[2026-03-01 16:55:02] 2026-03-01 15:54:15,132 | INFO     |  -- lfn=log.48838591._000851.job.log.tgz.1, status_code=0, status=transferred
[2026-03-01 16:55:02] 2026-03-01 15:54:15,132 | INFO     | stage-out finished correctly
[2026-03-01 16:55:02] 2026-03-01 15:54:15,402 | INFO     | time since job start (3445s) is within the limit (349056.0s)
[2026-03-01 16:55:02] 2026-03-01 15:54:16,538 | INFO     | PID=14303 has CPU usage=5.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-01 16:55:02] 2026-03-01 15:54:16,538 | INFO     | .. there are 3 such processes running
[2026-03-01 16:55:02] 2026-03-01 15:54:16,834 | INFO     | monitor loop #263: job 0:7030264479 is in state 'finished'
[2026-03-01 16:55:02] 2026-03-01 15:54:16,835 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-01 16:55:02] 2026-03-01 15:54:17,538 | INFO     | time since job start (3447s) is within the limit (349056.0s)
[2026-03-01 16:55:02] 2026-03-01 15:54:18,610 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-01 16:55:02] 2026-03-01 15:54:18,661 | INFO     | job 7030264479 has state=finished
[2026-03-01 16:55:02] 2026-03-01 15:54:18,661 | INFO     | preparing for final server update for job 7030264479 in state='finished'
[2026-03-01 16:55:02] 2026-03-01 15:54:18,661 | INFO     | reading metadata from: /tmp/job_11236144/atlas/pilot/slots/0/PanDA_Pilot-7030264479/jobReport.json
[2026-03-01 16:55:02] 2026-03-01 15:54:18,662 | INFO     | added worker_node to metadata from /tmp/job_11236144/atlas/pilot/slots/0/workernode_map.json
[2026-03-01 16:55:02] 2026-03-01 15:54:18,662 | INFO     | this job has now completed (state=finished)
[2026-03-01 16:55:02] 2026-03-01 15:54:18,662 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-01 16:55:02] 2026-03-01 15:54:18,662 | INFO     | log transfer has been attempted: DONE
[2026-03-01 16:55:02] 2026-03-01 15:54:18,662 | INFO     | job 7030264479 has finished - writing final server update
[2026-03-01 16:55:02] 2026-03-01 15:54:18,662 | INFO     | total number of processed events: 400 (read)
[2026-03-01 16:55:02] 2026-03-01 15:54:18,681 | INFO     | using path: /tmp/job_11236144/atlas/pilot/slots/0/PanDA_Pilot-7030264479/memory_monitor_summary.json (trf name=prmon)
[2026-03-01 16:55:02] 2026-03-01 15:54:18,681 | INFO     | extracted standard info from prmon json
[2026-03-01 16:55:02] 2026-03-01 15:54:18,681 | INFO     | extracted standard memory fields from prmon json
[2026-03-01 16:55:02] 2026-03-01 15:54:18,681 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-01 16:55:02] 2026-03-01 15:54:18,681 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-01 16:55:02] 2026-03-01 15:54:18,681 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-01 16:55:02] 2026-03-01 15:54:18,682 | INFO     | fitting pss+swap vs Time
[2026-03-01 16:55:02] 2026-03-01 15:54:18,682 | INFO     | sum of square deviations: 38744912.5
[2026-03-01 16:55:02] 2026-03-01 15:54:18,682 | INFO     | sum of deviations: -1820099913.5000002
[2026-03-01 16:55:02] 2026-03-01 15:54:18,682 | INFO     | mean x: 1772378825.5
[2026-03-01 16:55:02] 2026-03-01 15:54:18,682 | INFO     | mean y: 2599652.34
[2026-03-01 16:55:02] 2026-03-01 15:54:18,682 | INFO     | intersect: 83262732114.42213
[2026-03-01 16:55:02] 2026-03-01 15:54:18,682 | INFO     | chi2: 0.052545517450520954
[2026-03-01 16:55:02] 2026-03-01 15:54:18,682 | INFO     | current memory leak: -46.98 B/s (using 50 data points, chi2=0.05)
[2026-03-01 16:55:02] 2026-03-01 15:54:18,683 | INFO     | could have reported an average CPU frequency of 2364 MHz (5 samples)
[2026-03-01 16:55:02] 2026-03-01 15:54:18,683 | INFO     | ..............................
[2026-03-01 16:55:02] 2026-03-01 15:54:18,683 | INFO     | . Timing measurements:
[2026-03-01 16:55:02] 2026-03-01 15:54:18,683 | INFO     | . get job = 0 s
[2026-03-01 16:55:02] 2026-03-01 15:54:18,683 | INFO     | . initial setup = 2 s
[2026-03-01 16:55:02] 2026-03-01 15:54:18,683 | INFO     | . payload setup = 2 s
[2026-03-01 16:55:02] 2026-03-01 15:54:18,683 | INFO     | . stage-in = 0 s
[2026-03-01 16:55:02] 2026-03-01 15:54:18,683 | INFO     | . payload execution = 3427 s
[2026-03-01 16:55:02] 2026-03-01 15:54:18,683 | INFO     | . stage-out = 0 s
[2026-03-01 16:55:02] 2026-03-01 15:54:18,683 | INFO     | . log creation = 0 s
[2026-03-01 16:55:02] 2026-03-01 15:54:18,683 | INFO     | ..............................
[2026-03-01 16:55:02] 2026-03-01 15:54:19,029 | INFO     | 
[2026-03-01 16:55:02] 2026-03-01 15:54:19,030 | INFO     | job summary report
[2026-03-01 16:55:02] 2026-03-01 15:54:19,030 | INFO     | --------------------------------------------------
[2026-03-01 16:55:02] 2026-03-01 15:54:19,030 | INFO     | PanDA job id: 7030264479
[2026-03-01 16:55:02] 2026-03-01 15:54:19,030 | INFO     | task id: 48838591
[2026-03-01 16:55:02] 2026-03-01 15:54:19,030 | INFO     | errors: (none)
[2026-03-01 16:55:02] 2026-03-01 15:54:19,030 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-01 16:55:02] 2026-03-01 15:54:19,030 | INFO     | pilot state: finished 
[2026-03-01 16:55:02] 2026-03-01 15:54:19,030 | INFO     | transexitcode: 0
[2026-03-01 16:55:02] 2026-03-01 15:54:19,030 | INFO     | exeerrorcode: 0
[2026-03-01 16:55:02] 2026-03-01 15:54:19,030 | INFO     | exeerrordiag: 
[2026-03-01 16:55:02] 2026-03-01 15:54:19,030 | INFO     | exitcode: 0
[2026-03-01 16:55:02] 2026-03-01 15:54:19,030 | INFO     | exitmsg: OK
[2026-03-01 16:55:02] 2026-03-01 15:54:19,030 | INFO     | cpuconsumptiontime: 22835 s
[2026-03-01 16:55:02] 2026-03-01 15:54:19,030 | INFO     | nevents: 400
[2026-03-01 16:55:02] 2026-03-01 15:54:19,030 | INFO     | neventsw: 0
[2026-03-01 16:55:02] 2026-03-01 15:54:19,030 | INFO     | pid: 18781
[2026-03-01 16:55:02] 2026-03-01 15:54:19,030 | INFO     | pgrp: 18781
[2026-03-01 16:55:02] 2026-03-01 15:54:19,030 | INFO     | corecount: 8
[2026-03-01 16:55:02] 2026-03-01 15:54:19,030 | INFO     | event service: False
[2026-03-01 16:55:02] 2026-03-01 15:54:19,030 | INFO     | sizes: {0: 2282132, 1: 2282394, 11: 2282422, 3433: 2308202, 3434: 2317230, 3437: 2317640}
[2026-03-01 16:55:02] 2026-03-01 15:54:19,030 | INFO     | --------------------------------------------------
[2026-03-01 16:55:02] 2026-03-01 15:54:19,030 | INFO     | 
[2026-03-01 16:55:02] 2026-03-01 15:54:19,030 | INFO     | executing command: ls -lF /tmp/job_11236144/atlas/pilot/slots/0
[2026-03-01 16:55:02] 2026-03-01 15:54:19,041 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-01 16:55:02] 2026-03-01 15:54:19,041 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-01 16:55:02] 2026-03-01 15:54:19,042 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-01 16:55:02] 2026-03-01 15:54:19,042 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-01 16:55:02] 2026-03-01 15:54:19,042 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-01 16:55:02] 2026-03-01 15:54:19,042 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-01 16:55:02] 2026-03-01 15:54:19,042 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-01 16:55:02] 2026-03-01 15:54:19,042 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-01 16:55:02] 2026-03-01 15:54:19,042 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-01 16:55:02] 2026-03-01 15:54:19,042 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-01 16:55:02] 2026-03-01 15:54:19,042 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-01 16:55:02] 2026-03-01 15:54:19,042 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-01 16:55:02] 2026-03-01 15:54:19,042 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-01 16:55:02] 2026-03-01 15:54:19,042 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-01 16:55:02] 2026-03-01 15:54:19,042 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-01 16:55:02] 2026-03-01 15:54:19,042 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-01 16:55:02] 2026-03-01 15:54:19,042 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-01 16:55:02] 2026-03-01 15:54:19,042 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-01 16:55:02] 2026-03-01 15:54:19,042 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-01 16:55:02] 2026-03-01 15:54:19,042 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-01 16:55:02] 2026-03-01 15:54:19,042 | INFO     | job 7030264479 has completed (purged errors)
[2026-03-01 16:55:02] 2026-03-01 15:54:19,042 | INFO     | overall cleanup function is called
[2026-03-01 16:55:02] 2026-03-01 15:54:20,048 | INFO     | --- collectZombieJob: --- 10, [18781]
[2026-03-01 16:55:02] 2026-03-01 15:54:20,049 | INFO     | zombie collector waiting for pid 18781
[2026-03-01 16:55:02] 2026-03-01 15:54:20,049 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-01 16:55:02] 2026-03-01 15:54:20,049 | INFO     | collected zombie processes
[2026-03-01 16:55:02] 2026-03-01 15:54:20,049 | INFO     | will attempt to kill all subprocesses of pid=18781
[2026-03-01 16:55:02] 2026-03-01 15:54:20,153 | INFO     | process IDs to be killed: [18781] (in reverse order)
[2026-03-01 16:55:02] 2026-03-01 15:54:20,190 | WARNING  | found no corresponding commands to process id(s)
[2026-03-01 16:55:02] 2026-03-01 15:54:20,191 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-01 16:55:02] 2026-03-01 15:54:20,195 | INFO     | did not find any defunct processes belonging to 18781
[2026-03-01 16:55:02] 2026-03-01 15:54:20,198 | INFO     | did not find any defunct processes belonging to 18781
[2026-03-01 16:55:02] 2026-03-01 15:54:20,198 | INFO     | ready for new job
[2026-03-01 16:55:02] 2026-03-01 15:54:20,198 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-01 16:55:02] 2026-03-01 15:54:20,199 | INFO     | **************************************
[2026-03-01 16:55:02] 2026-03-01 15:54:20,199 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-01 16:55:02] 2026-03-01 15:54:20,199 | INFO     | **************************************
[2026-03-01 16:55:02] 2026-03-01 15:54:20,199 | INFO     | 
[2026-03-01 16:55:02] 2026-03-01 15:54:20,213 | INFO     | architecture information:
[2026-03-01 16:55:02] 2026-03-01 15:54:20,214 | INFO     | executing command: cat /etc/os-release
[2026-03-01 16:55:02] 2026-03-01 15:54:20,220 | INFO     | cat /etc/os-release:
[2026-03-01 16:55:02] NAME="CentOS Linux"
[2026-03-01 16:55:02] VERSION="7 (Core)"
[2026-03-01 16:55:02] ID="centos"
[2026-03-01 16:55:02] ID_LIKE="rhel fedora"
[2026-03-01 16:55:02] VERSION_ID="7"
[2026-03-01 16:55:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-01 16:55:02] ANSI_COLOR="0;31"
[2026-03-01 16:55:02] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-01 16:55:02] HOME_URL="https://www.centos.org/"
[2026-03-01 16:55:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-01 16:55:02] 
[2026-03-01 16:55:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-01 16:55:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-01 16:55:02] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-01 16:55:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-01 16:55:02] 
[2026-03-01 16:55:02] 2026-03-01 15:54:20,220 | INFO     | **************************************
[2026-03-01 16:55:02] 2026-03-01 15:54:20,723 | INFO     | executing command: df -mP /tmp/job_11236144/atlas/pilot/slots/0
[2026-03-01 16:55:02] 2026-03-01 15:54:20,732 | INFO     | sufficient remaining disk space (225565474816 B)
[2026-03-01 16:55:02] 2026-03-01 15:54:20,732 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-01 16:55:02] 2026-03-01 15:54:20,732 | INFO     | current server update state: UPDATING_FINAL
[2026-03-01 16:55:02] 2026-03-01 15:54:20,732 | INFO     | update_server=False
[2026-03-01 16:55:02] 2026-03-01 15:54:20,732 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-01 16:55:02] 2026-03-01 15:54:20,732 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-01 16:55:02] 2026-03-01 15:54:20,732 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-01 16:55:02] 2026-03-01 15:54:20,732 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-01 16:55:02] 2026-03-01 15:54:20,732 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-01 16:55:02] 2026-03-01 15:54:20,733 | INFO     | aborting loop
[2026-03-01 16:55:02] 2026-03-01 15:54:21,662 | INFO     | all payload control threads have been joined
[2026-03-01 16:55:02] 2026-03-01 15:54:21,737 | INFO     | [job] retrieve thread has finished
[2026-03-01 16:55:02] 2026-03-01 15:54:21,738 | INFO     | [job] queue monitor thread has finished
[2026-03-01 16:55:02] 2026-03-01 15:54:21,738 | INFO     | [job] job monitor thread has finished
[2026-03-01 16:55:02] 2026-03-01 15:54:21,813 | INFO     | all data control threads have been joined
[2026-03-01 16:55:02] 2026-03-01 15:54:21,919 | INFO     | [job] validate thread has finished
[2026-03-01 16:55:02] 2026-03-01 15:54:22,104 | INFO     | [payload] validate_post thread has finished
[2026-03-01 16:55:02] 2026-03-01 15:54:22,142 | INFO     | [data] copytool_in thread has finished
[2026-03-01 16:55:02] 2026-03-01 15:54:22,157 | INFO     | all job control threads have been joined
[2026-03-01 16:55:02] 2026-03-01 15:54:22,279 | INFO     | [payload] validate_pre thread has finished
[2026-03-01 16:55:02] 2026-03-01 15:54:22,667 | INFO     | [payload] control thread has finished
[2026-03-01 16:55:02] 2026-03-01 15:54:22,674 | INFO     | [payload] failed_post thread has finished
[2026-03-01 16:55:02] 2026-03-01 15:54:22,738 | INFO     | [data] copytool_out thread has finished
[2026-03-01 16:55:02] 2026-03-01 15:54:22,818 | INFO     | [data] control thread has finished
[2026-03-01 16:55:02] 2026-03-01 15:54:22,891 | INFO     | [payload] execute_payloads thread has finished
[2026-03-01 16:55:02] 2026-03-01 15:54:23,156 | INFO     | [job] create_data_payload thread has finished
[2026-03-01 16:55:02] 2026-03-01 15:54:23,162 | INFO     | [job] control thread has finished
[2026-03-01 16:55:02] 2026-03-01 15:54:24,738 | INFO     | [data] queue_monitor thread has finished
[2026-03-01 16:55:02] 2026-03-01 15:54:31,097 | INFO     | job.realtimelogging is not enabled
[2026-03-01 16:55:02] 2026-03-01 15:54:32,102 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-01 16:55:02] 2026-03-01 15:54:50,731 | INFO     | PID=14303 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-01 16:55:02] 2026-03-01 15:54:50,731 | INFO     | .. there are 3 such processes running
[2026-03-01 16:55:02] 2026-03-01 15:54:50,732 | INFO     | found 0 job(s) in 20 queues
[2026-03-01 16:55:02] 2026-03-01 15:54:50,732 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-01 16:55:02] 2026-03-01 15:54:50,732 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-01 16:55:02] 2026-03-01 15:54:55,371 | INFO     | [monitor] cgroup control has ended
[2026-03-01 16:55:02] 2026-03-01 15:54:57,014 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23456247945024)>', '<ExcThread(monitor, started 23456061089536)>']
[2026-03-01 16:55:02] 2026-03-01 15:54:57,767 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-01 16:55:02] 2026-03-01 15:54:57,767 | INFO     | [monitor] control thread has ended
[2026-03-01 16:55:02] 2026-03-01 15:55:02,039 | INFO     | all workflow threads have been joined
[2026-03-01 16:55:02] 2026-03-01 15:55:02,039 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-01 16:55:02] 2026-03-01 15:55:02,039 | INFO     | traces error code: 0
[2026-03-01 16:55:02] 2026-03-01 15:55:02,040 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-01 16:55:02] 2026-03-01 15:55:02,100 [wrapper] ==== pilot stdout END ====
[2026-03-01 16:55:02] 2026-03-01 15:55:02,101 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-01 16:55:02] 2026-03-01 15:55:02,102 [wrapper] pilotpid: 14303
[2026-03-01 16:55:02] 2026-03-01 15:55:02,103 [wrapper] Pilot exit status: 0
[2026-03-01 16:55:02] 2026-03-01 15:55:02,108 [wrapper] pandaids: 7030264479
[2026-03-01 16:55:02] 2026-03-01 15:55:02,132 [wrapper] cleanup supervisor_pilot 13429 14304
[2026-03-01 16:55:02] 2026-03-01 15:55:02,133 [wrapper] Test setup, not cleaning
[2026-03-01 16:55:02] 2026-03-01 15:55:02,135 [wrapper] apfmon messages muted
[2026-03-01 16:55:02] 2026-03-01 15:55:02,136 [wrapper] ==== wrapper stdout END ====
[2026-03-01 16:55:02] 2026-03-01 15:55:02,137 [wrapper] ==== wrapper stderr END ====
[2026-03-01 16:55:02]  *** Error codes and diagnostics ***
[2026-03-01 16:55:02]     "exeErrorCode": 0,
[2026-03-01 16:55:02]     "exeErrorDiag": "",
[2026-03-01 16:55:02]     "pilotErrorCode": 0,
[2026-03-01 16:55:02]     "pilotErrorDiag": "",
[2026-03-01 16:55:02]  *** Listing of results directory ***
[2026-03-01 16:55:02] total 483584
[2026-03-01 16:55:02] -rw------- 1 mf493845 unix-user    584627 Feb 25 14:22 pilot3.tar.gz
[2026-03-01 16:55:02] -rwx------ 1 mf493845 unix-user     36322 Feb 25 14:26 runpilot2-wrapper.sh
[2026-03-01 16:55:02] -rw------- 1 mf493845 unix-user      5111 Feb 25 14:26 queuedata.json
[2026-03-01 16:55:02] -rw------- 1 mf493845 unix-user       100 Mar  1 14:45 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-01 16:55:02] -rwxr-xr-x 1 mf493845 unix-user      7986 Mar  1 14:45 run_atlas
[2026-03-01 16:55:02] -rw------- 1 mf493845 unix-user       105 Mar  1 14:45 job.xml
[2026-03-01 16:55:02] -rw-r--r-- 2 mf493845 unix-user     15845 Mar  1 15:56 start_atlas.sh
[2026-03-01 16:55:02] drwxrwx--x 2 mf493845 unix-user       100 Mar  1 15:56 shared
[2026-03-01 16:55:02] -rw-r--r-- 2 mf493845 unix-user    597966 Mar  1 15:56 input.tar.gz
[2026-03-01 16:55:02] -rw------- 1 mf493845 unix-user      6390 Mar  1 15:56 init_data.xml
[2026-03-01 16:55:02] -rw-r--r-- 2 mf493845 unix-user 279181218 Mar  1 15:56 EVNT.48220229._000035.pool.root.1
[2026-03-01 16:55:02] -rw------- 1 mf493845 unix-user         0 Mar  1 15:56 boinc_setup_complete
[2026-03-01 16:55:02] -rw------- 1 mf493845 unix-user      8192 Mar  1 15:56 boinc_mmap_file
[2026-03-01 16:55:02] -rw------- 1 mf493845 unix-user         0 Mar  1 15:56 boinc_lockfile
[2026-03-01 16:55:02] -rw------- 1 mf493845 unix-user      2562 Mar  1 15:56 pandaJob.out
[2026-03-01 16:55:02] -rw------- 1 mf493845 unix-user    998184 Mar  1 15:56 agis_schedconf.cvmfs.json
[2026-03-01 16:55:02] -rw------- 1 mf493845 unix-user   1513015 Mar  1 15:56 agis_ddmendpoints.agis.ALL.json
[2026-03-01 16:55:02] -rw------- 1 mf493845 unix-user       415 Mar  1 15:56 workernode_map.json
[2026-03-01 16:55:02] drwx------ 5 mf493845 unix-user       440 Mar  1 15:56 pilot3
[2026-03-01 16:55:02] -rw------- 1 mf493845 unix-user 210462478 Mar  1 16:53 HITS.48838591._000851.pool.root.1
[2026-03-01 16:55:02] -rw------- 1 mf493845 unix-user      1019 Mar  1 16:54 memory_monitor_summary.json
[2026-03-01 16:55:02] -rw------- 1 mf493845 unix-user    291897 Mar  1 16:54 log.48838591._000851.job.log.tgz.1
[2026-03-01 16:55:02] -rw------- 1 mf493845 unix-user      6303 Mar  1 16:54 heartbeat.json
[2026-03-01 16:55:02] -rw------- 1 mf493845 unix-user        95 Mar  1 16:54 pilot_heartbeat.json
[2026-03-01 16:55:02] -rw------- 1 mf493845 unix-user      4903 Mar  1 16:55 pilotlog.txt
[2026-03-01 16:55:02] -rw------- 1 mf493845 unix-user    531689 Mar  1 16:55 log.48838591._000851.job.log.1
[2026-03-01 16:55:02] -rw------- 1 mf493845 unix-user       357 Mar  1 16:55 output.list
[2026-03-01 16:55:02] -rw------- 1 mf493845 unix-user       620 Mar  1 16:55 runtime_log
[2026-03-01 16:55:02] -rw------- 1 mf493845 unix-user    839680 Mar  1 16:55 result.tar.gz
[2026-03-01 16:55:02] -rw------- 1 mf493845 unix-user      9219 Mar  1 16:55 runtime_log.err
[2026-03-01 16:55:02] -rw------- 1 mf493845 unix-user       643 Mar  1 16:55 5E1MDmB5TF9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmKvzKDm8X2VFo.diag
[2026-03-01 16:55:02] -rw------- 1 mf493845 unix-user     21981 Mar  1 16:55 stderr.txt
[2026-03-01 16:55:02] HITS file was successfully produced:
[2026-03-01 16:55:02] -rw------- 1 mf493845 unix-user 210462478 Mar  1 16:53 shared/HITS.pool.root.1
[2026-03-01 16:55:02]  *** Contents of shared directory: ***
[2026-03-01 16:55:02] total 479592
[2026-03-01 16:55:02] -rw-r--r-- 2 mf493845 unix-user     15845 Mar  1 15:56 start_atlas.sh
[2026-03-01 16:55:02] -rw-r--r-- 2 mf493845 unix-user    597966 Mar  1 15:56 input.tar.gz
[2026-03-01 16:55:02] -rw-r--r-- 2 mf493845 unix-user 279181218 Mar  1 15:56 ATLAS.root_0
[2026-03-01 16:55:02] -rw------- 1 mf493845 unix-user 210462478 Mar  1 16:53 HITS.pool.root.1
[2026-03-01 16:55:02] -rw------- 1 mf493845 unix-user    839680 Mar  1 16:55 result.tar.gz
16:55:04 (10418): run_atlas exited; CPU time 22876.280088
16:55:04 (10418): called boinc_finish(0)

</stderr_txt>
]]>

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