Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
00:29:05 (1124): wrapper (7.7.26015): starting
00:29:05 (1124): wrapper: running run_atlas (--nthreads 8)
[2026-03-02 00:29:05] Arguments: --nthreads 8
[2026-03-02 00:29:05] Threads: 8
[2026-03-02 00:29:05] Checking for CVMFS
[2026-03-02 00:29:06] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-02 00:29:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-02 00:29:07] Running cvmfs_config stat atlas.cern.ch
[2026-03-02 00:29:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-02 00:29:08] 2.11.2.0 10929 109498 135160 156788 2 53 24580035 25165825 899 130560 158 35298191 99.841 20854736 765 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-03-02 00:29:08] CVMFS is ok
[2026-03-02 00:29:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-02 00:29:08] Checking for apptainer binary...
[2026-03-02 00:29:08] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-02 00:29:08] Running /usr/bin/apptainer --version
[2026-03-02 00:29:08] apptainer version 1.3.2-1.el7
[2026-03-02 00:29:08] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-02 00:29:36] cg-vwn424.simple-grid.lan
[2026-03-02 00:29:36] apptainer works
[2026-03-02 00:29:36] Set ATHENA_PROC_NUMBER=8
[2026-03-02 00:29:36] Set ATHENA_CORE_NUMBER=8
[2026-03-02 00:29:36] Starting ATLAS job with PandaID=7034617953
[2026-03-02 00:29:36] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/9 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-02 12:45:36]  *** The last 200 lines of the pilot log: ***
[2026-03-02 12:45:36] 2026-03-02 11:44:57,845 | INFO     | total number of processed events: 400 (read)
[2026-03-02 12:45:36] 2026-03-02 11:44:57,847 | INFO     | using path: /var/lib/boinc/slots/9/PanDA_Pilot-7034617953/memory_monitor_summary.json (trf name=prmon)
[2026-03-02 12:45:36] 2026-03-02 11:44:57,848 | INFO     | extracted standard info from prmon json
[2026-03-02 12:45:36] 2026-03-02 11:44:57,848 | INFO     | extracted standard memory fields from prmon json
[2026-03-02 12:45:36] 2026-03-02 11:44:57,848 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-02 12:45:36] 2026-03-02 11:44:57,848 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-02 12:45:36] 2026-03-02 11:44:57,848 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-02 12:45:36] 2026-03-02 11:44:57,862 | INFO     | fitting pss+swap vs Time
[2026-03-02 12:45:36] 2026-03-02 11:44:57,866 | INFO     | sum of square deviations: 112394784572.0
[2026-03-02 12:45:36] 2026-03-02 11:44:57,881 | INFO     | sum of deviations: 351280978526.0
[2026-03-02 12:45:36] 2026-03-02 11:44:57,881 | INFO     | mean x: 1772430162.0
[2026-03-02 12:45:36] 2026-03-02 11:44:57,881 | INFO     | mean y: 2493116.587657784
[2026-03-02 12:45:36] 2026-03-02 11:44:57,881 | INFO     | intersect: -5537096678.857933
[2026-03-02 12:45:36] 2026-03-02 11:44:57,882 | INFO     | chi2: 8.21161228454654
[2026-03-02 12:45:36] 2026-03-02 11:44:57,884 | INFO     | sum of square deviations: 110046777757.0
[2026-03-02 12:45:36] 2026-03-02 11:44:57,898 | INFO     | sum of deviations: 444272096136.99994
[2026-03-02 12:45:36] 2026-03-02 11:44:57,898 | INFO     | mean x: 1772430009.5
[2026-03-02 12:45:36] 2026-03-02 11:44:57,899 | INFO     | mean y: 2499129.7627118644
[2026-03-02 12:45:36] 2026-03-02 11:44:57,899 | INFO     | intersect: -7153014294.860021
[2026-03-02 12:45:36] 2026-03-02 11:44:57,900 | INFO     | chi2: 6.696936988460291
[2026-03-02 12:45:36] 2026-03-02 11:44:57,900 | INFO     | current chi2=6.696936988460291 (change=18.44552864407299 %)
[2026-03-02 12:45:36] 2026-03-02 11:44:57,900 | INFO     | right removable region: 707
[2026-03-02 12:45:36] 2026-03-02 11:44:57,901 | INFO     | sum of square deviations: 110046777757.0
[2026-03-02 12:45:36] 2026-03-02 11:44:57,917 | INFO     | time since job start (43746s) is within the limit (349056.0s)
[2026-03-02 12:45:36] 2026-03-02 11:44:57,923 | INFO     | sum of deviations: 99122200252.49985
[2026-03-02 12:45:36] 2026-03-02 11:44:57,923 | INFO     | mean x: 1772430314.5
[2026-03-02 12:45:36] 2026-03-02 11:44:57,923 | INFO     | mean y: 2509489.213276836
[2026-03-02 12:45:36] 2026-03-02 11:44:57,924 | INFO     | intersect: -1593967901.1144462
[2026-03-02 12:45:36] 2026-03-02 11:44:57,925 | INFO     | chi2: 3.6865012174290346
[2026-03-02 12:45:36] 2026-03-02 11:44:57,925 | INFO     | current chi2=3.6865012174290346 (change=55.10624357695658 %)
[2026-03-02 12:45:36] 2026-03-02 11:44:57,926 | INFO     | sum of square deviations: 107731701792.0
[2026-03-02 12:45:36] 2026-03-02 11:44:57,950 | INFO     | sum of deviations: -60299630208.0
[2026-03-02 12:45:36] 2026-03-02 11:44:57,950 | INFO     | mean x: 1772430467.0
[2026-03-02 12:45:36] 2026-03-02 11:44:57,950 | INFO     | mean y: 2519977.509246088
[2026-03-02 12:45:36] 2026-03-02 11:44:57,950 | INFO     | intersect: 994585450.8259339
[2026-03-02 12:45:36] 2026-03-02 11:44:57,951 | INFO     | chi2: 1.7397088872983253
[2026-03-02 12:45:36] 2026-03-02 11:44:57,952 | INFO     | current chi2=1.7397088872983253 (change=52.808671835687115 %)
[2026-03-02 12:45:36] 2026-03-02 11:44:57,953 | INFO     | sum of square deviations: 105449324114.5
[2026-03-02 12:45:36] 2026-03-02 11:44:57,967 | INFO     | sum of deviations: -80523716821.5
[2026-03-02 12:45:36] 2026-03-02 11:44:57,967 | INFO     | mean x: 1772430619.5
[2026-03-02 12:45:36] 2026-03-02 11:44:57,968 | INFO     | mean y: 2521326.004297994
[2026-03-02 12:45:36] 2026-03-02 11:44:57,968 | INFO     | intersect: 1355993266.0937505
[2026-03-02 12:45:36] 2026-03-02 11:44:57,969 | INFO     | chi2: 1.701147628945186
[2026-03-02 12:45:36] 2026-03-02 11:44:57,969 | INFO     | current chi2=1.701147628945186 (change=2.216535113125907 %)
[2026-03-02 12:45:36] 2026-03-02 11:44:57,969 | INFO     | left removable region: 30
[2026-03-02 12:45:36] 2026-03-02 11:44:57,970 | INFO     | sum of square deviations: 96215154698.0
[2026-03-02 12:45:36] 2026-03-02 11:44:57,984 | INFO     | sum of deviations: 54555119419.99999
[2026-03-02 12:45:36] 2026-03-02 11:44:57,984 | INFO     | mean x: 1772430894.0
[2026-03-02 12:45:36] 2026-03-02 11:44:57,984 | INFO     | mean y: 2524753.2023633677
[2026-03-02 12:45:36] 2026-03-02 11:44:57,984 | INFO     | intersect: -1002464319.3545955
[2026-03-02 12:45:36] 2026-03-02 11:44:57,985 | INFO     | chi2: 0.05355788183691411
[2026-03-02 12:45:36] 2026-03-02 11:44:57,986 | INFO     | current memory leak: 0.57 B/s (using 677 data points, chi2=0.05)
[2026-03-02 12:45:36] 2026-03-02 11:44:57,987 | INFO     | could have reported an average CPU frequency of 1999 MHz (28 samples)
[2026-03-02 12:45:36] 2026-03-02 11:44:57,987 | INFO     | ..............................
[2026-03-02 12:45:36] 2026-03-02 11:44:57,987 | INFO     | . Timing measurements:
[2026-03-02 12:45:36] 2026-03-02 11:44:57,987 | INFO     | . get job = 0 s
[2026-03-02 12:45:36] 2026-03-02 11:44:57,987 | INFO     | . initial setup = 121 s
[2026-03-02 12:45:36] 2026-03-02 11:44:57,987 | INFO     | . payload setup = 154 s
[2026-03-02 12:45:36] 2026-03-02 11:44:57,987 | INFO     | . stage-in = 0 s
[2026-03-02 12:45:36] 2026-03-02 11:44:57,988 | INFO     | . payload execution = 43575 s
[2026-03-02 12:45:36] 2026-03-02 11:44:57,988 | INFO     | . stage-out = 5 s
[2026-03-02 12:45:36] 2026-03-02 11:44:57,988 | INFO     | . log creation = 2 s
[2026-03-02 12:45:36] 2026-03-02 11:44:57,988 | INFO     | ..............................
[2026-03-02 12:45:36] 2026-03-02 11:44:58,106 | INFO     | 
[2026-03-02 12:45:36] 2026-03-02 11:44:58,107 | INFO     | job summary report
[2026-03-02 12:45:36] 2026-03-02 11:44:58,107 | INFO     | --------------------------------------------------
[2026-03-02 12:45:36] 2026-03-02 11:44:58,107 | INFO     | PanDA job id: 7034617953
[2026-03-02 12:45:36] 2026-03-02 11:44:58,107 | INFO     | task id: 48843914
[2026-03-02 12:45:36] 2026-03-02 11:44:58,107 | INFO     | errors: (none)
[2026-03-02 12:45:36] 2026-03-02 11:44:58,107 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-02 12:45:36] 2026-03-02 11:44:58,107 | INFO     | pilot state: finished 
[2026-03-02 12:45:36] 2026-03-02 11:44:58,107 | INFO     | transexitcode: 0
[2026-03-02 12:45:36] 2026-03-02 11:44:58,107 | INFO     | exeerrorcode: 0
[2026-03-02 12:45:36] 2026-03-02 11:44:58,108 | INFO     | exeerrordiag: 
[2026-03-02 12:45:36] 2026-03-02 11:44:58,108 | INFO     | exitcode: 0
[2026-03-02 12:45:36] 2026-03-02 11:44:58,108 | INFO     | exitmsg: OK
[2026-03-02 12:45:36] 2026-03-02 11:44:58,108 | INFO     | cpuconsumptiontime: 170310 s
[2026-03-02 12:45:36] 2026-03-02 11:44:58,108 | INFO     | nevents: 400
[2026-03-02 12:45:36] 2026-03-02 11:44:58,108 | INFO     | neventsw: 0
[2026-03-02 12:45:36] 2026-03-02 11:44:58,108 | INFO     | pid: 9611
[2026-03-02 12:45:36] 2026-03-02 11:44:58,108 | INFO     | pgrp: 9611
[2026-03-02 12:45:36] 2026-03-02 11:44:58,108 | INFO     | corecount: 8
[2026-03-02 12:45:36] 2026-03-02 11:44:58,109 | INFO     | event service: False
[2026-03-02 12:45:36] 2026-03-02 11:44:58,109 | INFO     | sizes: {0: 2281904, 1: 2282365, 2: 2282365, 43733: 2326678, 43734: 2326677, 43739: 2335731, 43742: 2335915, 43744: 2336109}
[2026-03-02 12:45:36] 2026-03-02 11:44:58,109 | INFO     | --------------------------------------------------
[2026-03-02 12:45:36] 2026-03-02 11:44:58,109 | INFO     | 
[2026-03-02 12:45:36] 2026-03-02 11:44:58,109 | INFO     | executing command: ls -lF /var/lib/boinc/slots/9
[2026-03-02 12:45:36] 2026-03-02 11:44:58,634 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-02 12:45:36] 2026-03-02 11:44:58,634 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-02 12:45:36] 2026-03-02 11:44:58,635 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-02 12:45:36] 2026-03-02 11:44:58,635 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-02 12:45:36] 2026-03-02 11:44:58,635 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-02 12:45:36] 2026-03-02 11:44:58,635 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-02 12:45:36] 2026-03-02 11:44:58,635 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-02 12:45:36] 2026-03-02 11:44:58,635 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-02 12:45:36] 2026-03-02 11:44:58,635 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-02 12:45:36] 2026-03-02 11:44:58,635 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-02 12:45:36] 2026-03-02 11:44:58,636 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-02 12:45:36] 2026-03-02 11:44:58,636 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-02 12:45:36] 2026-03-02 11:44:58,636 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-02 12:45:36] 2026-03-02 11:44:58,636 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-02 12:45:36] 2026-03-02 11:44:58,636 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-02 12:45:36] 2026-03-02 11:44:58,636 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-02 12:45:36] 2026-03-02 11:44:58,636 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-02 12:45:36] 2026-03-02 11:44:58,636 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-02 12:45:36] 2026-03-02 11:44:58,636 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-02 12:45:36] 2026-03-02 11:44:58,637 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-02 12:45:36] 2026-03-02 11:44:58,637 | INFO     | job 7034617953 has completed (purged errors)
[2026-03-02 12:45:36] 2026-03-02 11:44:58,637 | INFO     | overall cleanup function is called
[2026-03-02 12:45:36] 2026-03-02 11:44:59,646 | INFO     | --- collectZombieJob: --- 10, [9611]
[2026-03-02 12:45:36] 2026-03-02 11:44:59,647 | INFO     | zombie collector waiting for pid 9611
[2026-03-02 12:45:36] 2026-03-02 11:44:59,647 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-02 12:45:36] 2026-03-02 11:44:59,647 | INFO     | collected zombie processes
[2026-03-02 12:45:36] 2026-03-02 11:44:59,647 | INFO     | will attempt to kill all subprocesses of pid=9611
[2026-03-02 12:45:36] 2026-03-02 11:44:59,737 | INFO     | process IDs to be killed: [9611] (in reverse order)
[2026-03-02 12:45:36] 2026-03-02 11:45:00,530 | WARNING  | found no corresponding commands to process id(s)
[2026-03-02 12:45:36] 2026-03-02 11:45:00,530 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-02 12:45:36] 2026-03-02 11:45:00,533 | INFO     | did not find any defunct processes belonging to 9611
[2026-03-02 12:45:36] 2026-03-02 11:45:00,534 | INFO     | did not find any defunct processes belonging to 9611
[2026-03-02 12:45:36] 2026-03-02 11:45:00,535 | INFO     | ready for new job
[2026-03-02 12:45:36] 2026-03-02 11:45:00,535 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-02 12:45:36] 2026-03-02 11:45:00,543 | INFO     | **************************************
[2026-03-02 12:45:36] 2026-03-02 11:45:00,544 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-02 12:45:36] 2026-03-02 11:45:00,544 | INFO     | **************************************
[2026-03-02 12:45:36] 2026-03-02 11:45:00,544 | INFO     | 
[2026-03-02 12:45:36] 2026-03-02 11:45:00,545 | INFO     | pilot is running in a VM
[2026-03-02 12:45:36] 2026-03-02 11:45:00,545 | INFO     | architecture information:
[2026-03-02 12:45:36] 2026-03-02 11:45:00,559 | INFO     | executing command: cat /etc/os-release
[2026-03-02 12:45:36] 2026-03-02 11:45:00,900 | INFO     | cat /etc/os-release:
[2026-03-02 12:45:36] NAME="CentOS Linux"
[2026-03-02 12:45:36] VERSION="7 (Core)"
[2026-03-02 12:45:36] ID="centos"
[2026-03-02 12:45:36] ID_LIKE="rhel fedora"
[2026-03-02 12:45:36] VERSION_ID="7"
[2026-03-02 12:45:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-02 12:45:36] ANSI_COLOR="0;31"
[2026-03-02 12:45:36] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-02 12:45:36] HOME_URL="https://www.centos.org/"
[2026-03-02 12:45:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-02 12:45:36] 
[2026-03-02 12:45:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-02 12:45:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-02 12:45:36] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-02 12:45:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-02 12:45:36] 
[2026-03-02 12:45:36] 2026-03-02 11:45:00,900 | INFO     | **************************************
[2026-03-02 12:45:36] 2026-03-02 11:45:01,404 | INFO     | executing command: df -mP /var/lib/boinc/slots/9
[2026-03-02 12:45:36] 2026-03-02 11:45:01,681 | INFO     | sufficient remaining disk space (495743664128 B)
[2026-03-02 12:45:36] 2026-03-02 11:45:01,682 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-02 12:45:36] 2026-03-02 11:45:01,682 | INFO     | current server update state: UPDATING_FINAL
[2026-03-02 12:45:36] 2026-03-02 11:45:01,682 | INFO     | update_server=False
[2026-03-02 12:45:36] 2026-03-02 11:45:01,682 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-02 12:45:36] 2026-03-02 11:45:01,684 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-02 12:45:36] 2026-03-02 11:45:01,908 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-02 12:45:36] 2026-03-02 11:45:01,909 | INFO     | aborting loop
[2026-03-02 12:45:36] 2026-03-02 11:45:02,191 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-02 12:45:36] 2026-03-02 11:45:02,623 | INFO     | all data control threads have been joined
[2026-03-02 12:45:36] 2026-03-02 11:45:02,688 | INFO     | [job] retrieve thread has finished
[2026-03-02 12:45:36] 2026-03-02 11:45:02,824 | INFO     | all payload control threads have been joined
[2026-03-02 12:45:36] 2026-03-02 11:45:02,852 | INFO     | all job control threads have been joined
[2026-03-02 12:45:36] 2026-03-02 11:45:02,914 | INFO     | [job] job monitor thread has finished
[2026-03-02 12:45:36] 2026-03-02 11:45:03,122 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-02 12:45:36] 2026-03-02 11:45:03,252 | INFO     | [job] validate thread has finished
[2026-03-02 12:45:36] 2026-03-02 11:45:03,480 | INFO     | [payload] failed_post thread has finished
[2026-03-02 12:45:36] 2026-03-02 11:45:03,491 | INFO     | [payload] validate_post thread has finished
[2026-03-02 12:45:36] 2026-03-02 11:45:03,526 | INFO     | [payload] validate_pre thread has finished
[2026-03-02 12:45:36] 2026-03-02 11:45:03,629 | INFO     | [data] control thread has finished
[2026-03-02 12:45:36] 2026-03-02 11:45:03,643 | INFO     | [job] create_data_payload thread has finished
[2026-03-02 12:45:36] 2026-03-02 11:45:03,691 | INFO     | [data] copytool_out thread has finished
[2026-03-02 12:45:36] 2026-03-02 11:45:03,729 | INFO     | [data] copytool_in thread has finished
[2026-03-02 12:45:36] 2026-03-02 11:45:03,830 | INFO     | [payload] control thread has finished
[2026-03-02 12:45:36] 2026-03-02 11:45:03,858 | INFO     | [job] control thread has finished
[2026-03-02 12:45:36] 2026-03-02 11:45:03,860 | INFO     | [payload] execute_payloads thread has finished
[2026-03-02 12:45:36] 2026-03-02 11:45:04,074 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-02 12:45:36] 2026-03-02 11:45:04,128 | INFO     | [job] queue monitor thread has finished
[2026-03-02 12:45:36] 2026-03-02 11:45:06,199 | INFO     | [data] queue_monitor thread has finished
[2026-03-02 12:45:36] 2026-03-02 11:45:06,918 | INFO     | [monitor] cgroup control has ended
[2026-03-02 12:45:36] 2026-03-02 11:45:07,878 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139817256462144)>', '<ExcThread(monitor, started 139816217868032)>']
[2026-03-02 12:45:36] 2026-03-02 11:45:12,904 | INFO     | all workflow threads have been joined
[2026-03-02 12:45:36] 2026-03-02 11:45:12,905 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-02 12:45:36] 2026-03-02 11:45:12,905 | INFO     | traces error code: 0
[2026-03-02 12:45:36] 2026-03-02 11:45:12,905 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-02 12:45:36] 2026-03-02 11:45:31,085 | INFO     | PID=5146 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-03-02 12:45:36] 2026-03-02 11:45:31,086 | INFO     | .. there are 2 such processes running
[2026-03-02 12:45:36] 2026-03-02 11:45:31,086 | INFO     | found 0 job(s) in 20 queues
[2026-03-02 12:45:36] 2026-03-02 11:45:31,086 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-02 12:45:36] 2026-03-02 11:45:31,086 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-02 12:45:36] 2026-03-02 11:45:31,086 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-02 12:45:36] 2026-03-02 11:45:31,087 | CRITICAL | thread 'MainThread' is not alive
[2026-03-02 12:45:36] 2026-03-02 11:45:31,087 | INFO     | [monitor] control thread has ended
[2026-03-02 12:45:36] 2026-03-02 11:45:31,566 [wrapper] ==== pilot stdout END ====
[2026-03-02 12:45:36] 2026-03-02 11:45:31,670 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-02 12:45:36] 2026-03-02 11:45:31,763 [wrapper] pilotpid: 5146
[2026-03-02 12:45:36] 2026-03-02 11:45:31,855 [wrapper] Pilot exit status: 0
[2026-03-02 12:45:36] 2026-03-02 11:45:32,294 [wrapper] pandaids: 7034617953
[2026-03-02 12:45:36] 2026-03-02 11:45:33,475 [wrapper] cleanup supervisor_pilot 18871 5147
[2026-03-02 12:45:36] 2026-03-02 11:45:33,581 [wrapper] Test setup, not cleaning
[2026-03-02 12:45:36] 2026-03-02 11:45:33,656 [wrapper] apfmon messages muted
[2026-03-02 12:45:36] 2026-03-02 11:45:33,751 [wrapper] ==== wrapper stdout END ====
[2026-03-02 12:45:36] 2026-03-02 11:45:33,877 [wrapper] ==== wrapper stderr END ====
[2026-03-02 12:45:36]  *** Error codes and diagnostics ***
[2026-03-02 12:45:36]     "exeErrorCode": 0,
[2026-03-02 12:45:36]     "exeErrorDiag": "",
[2026-03-02 12:45:36]     "pilotErrorCode": 0,
[2026-03-02 12:45:36]     "pilotErrorDiag": "",
[2026-03-02 12:45:36]  *** Listing of results directory ***
[2026-03-02 12:45:36] total 517872
[2026-03-02 12:45:36] -rw-r--r--. 1 boinc boinc    584627 Mar  1 10:10 pilot3.tar.gz
[2026-03-02 12:45:36] -rwx------. 1 boinc boinc     36322 Mar  1 10:18 runpilot2-wrapper.sh
[2026-03-02 12:45:36] -rw-r--r--. 1 boinc boinc      5111 Mar  1 10:18 queuedata.json
[2026-03-02 12:45:36] -rw-r--r--. 1 boinc boinc       100 Mar  2 00:29 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-02 12:45:36] -rwxr-xr-x. 1 boinc boinc      7986 Mar  2 00:29 run_atlas
[2026-03-02 12:45:36] -rw-r--r--. 1 boinc boinc       105 Mar  2 00:29 job.xml
[2026-03-02 12:45:36] -rw-r--r--. 2 boinc boinc 249853279 Mar  2 00:29 EVNT.48452077._000002.pool.root.1
[2026-03-02 12:45:36] -rw-r--r--. 1 boinc boinc      6390 Mar  2 00:29 init_data.xml
[2026-03-02 12:45:36] -rw-r--r--. 2 boinc boinc     15845 Mar  2 00:29 start_atlas.sh
[2026-03-02 12:45:36] drwxrwx--x. 2 boinc boinc        68 Mar  2 00:29 shared
[2026-03-02 12:45:36] -rw-r--r--. 2 boinc boinc    597963 Mar  2 00:29 input.tar.gz
[2026-03-02 12:45:36] -rw-r--r--. 1 boinc boinc         0 Mar  2 00:29 boinc_lockfile
[2026-03-02 12:45:36] -rw-r--r--. 1 boinc boinc      2611 Mar  2 00:29 pandaJob.out
[2026-03-02 12:45:36] -rw-------. 1 boinc boinc       415 Mar  2 00:35 workernode_map.json
[2026-03-02 12:45:36] -rw-------. 1 boinc boinc    998184 Mar  2 00:35 agis_schedconf.cvmfs.json
[2026-03-02 12:45:36] drwx------. 5 boinc boinc      4096 Mar  2 00:35 pilot3
[2026-03-02 12:45:36] -rw-------. 1 boinc boinc 262708808 Mar  2 12:43 HITS.48843914._000045.pool.root.1
[2026-03-02 12:45:36] -rw-r--r--. 1 boinc boinc       532 Mar  2 12:43 boinc_task_state.xml
[2026-03-02 12:45:36] -rw-------. 1 boinc boinc        95 Mar  2 12:44 pilot_heartbeat.json
[2026-03-02 12:45:36] -rw-------. 1 boinc boinc      1025 Mar  2 12:44 memory_monitor_summary.json
[2026-03-02 12:45:36] -rw-------. 1 boinc boinc   1513015 Mar  2 12:44 agis_ddmendpoints.agis.ALL.json
[2026-03-02 12:45:36] -rw-------. 1 boinc boinc    873257 Mar  2 12:44 log.48843914._000045.job.log.tgz.1
[2026-03-02 12:45:36] -rw-------. 1 boinc boinc      6312 Mar  2 12:44 heartbeat.json
[2026-03-02 12:45:36] -rw-r--r--. 1 boinc boinc      8192 Mar  2 12:45 boinc_mmap_file
[2026-03-02 12:45:36] -rw-r--r--. 1 boinc boinc        29 Mar  2 12:45 wrapper_checkpoint.txt
[2026-03-02 12:45:36] -rw-------. 1 boinc boinc       889 Mar  2 12:45 pilotlog.txt
[2026-03-02 12:45:36] -rw-------. 1 boinc boinc   6040283 Mar  2 12:45 log.48843914._000045.job.log.1
[2026-03-02 12:45:36] -rw-------. 1 boinc boinc       357 Mar  2 12:45 output.list
[2026-03-02 12:45:36] -rw-r--r--. 1 boinc boinc       620 Mar  2 12:45 runtime_log
[2026-03-02 12:45:36] -rw-------. 1 boinc boinc   6932480 Mar  2 12:45 result.tar.gz
[2026-03-02 12:45:36] -rw-------. 1 boinc boinc       658 Mar  2 12:45 uScMDml7rG9n9Rq4apOajLDm4fhM0noT9bVooX4SDmGj7KDm9uxhPo.diag
[2026-03-02 12:45:36] -rw-r--r--. 1 boinc boinc      8816 Mar  2 12:45 runtime_log.err
[2026-03-02 12:45:36] -rw-r--r--. 1 boinc boinc     20703 Mar  2 12:45 stderr.txt
[2026-03-02 12:45:36] HITS file was successfully produced:
[2026-03-02 12:45:36] -rw-------. 1 boinc boinc 262708808 Mar  2 12:43 shared/HITS.pool.root.1
[2026-03-02 12:45:36]  *** Contents of shared directory: ***
[2026-03-02 12:45:36] total 507924
[2026-03-02 12:45:36] -rw-r--r--. 2 boinc boinc 249853279 Mar  2 00:29 ATLAS.root_0
[2026-03-02 12:45:36] -rw-r--r--. 2 boinc boinc     15845 Mar  2 00:29 start_atlas.sh
[2026-03-02 12:45:36] -rw-r--r--. 2 boinc boinc    597963 Mar  2 00:29 input.tar.gz
[2026-03-02 12:45:36] -rw-------. 1 boinc boinc 262708808 Mar  2 12:43 HITS.pool.root.1
[2026-03-02 12:45:36] -rw-------. 1 boinc boinc   6932480 Mar  2 12:45 result.tar.gz
12:45:37 (1124): run_atlas exited; CPU time 170822.792650
12:45:37 (1124): called boinc_finish(0)

</stderr_txt>
]]>

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