Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
00:48:41 (2553559): wrapper (7.7.26015): starting
00:48:41 (2553559): wrapper: running run_atlas (--nthreads 4)
[2026-03-02 00:48:41] Arguments: --nthreads 4
[2026-03-02 00:48:41] Threads: 4
[2026-03-02 00:48:41] Checking for CVMFS
[2026-03-02 00:48:41] No cvmfs_config command found, will try listing directly
[2026-03-02 00:48:41] CVMFS is ok
[2026-03-02 00:48:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-02 00:48:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-02 00:48:41] Further information can be found at the LHC@home message board.
[2026-03-02 00:48:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-02 00:48:41] Checking for apptainer binary...
[2026-03-02 00:48:41] which: no apptainer in ((null))
[2026-03-02 00:48:41] apptainer is not installed, using version from CVMFS
[2026-03-02 00:48:41] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-02 00:48:41] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot192/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut19.grid.cesnet.cz
[2026-03-02 00:48:41] apptainer works
[2026-03-02 00:48:41] Set ATHENA_PROC_NUMBER=4
[2026-03-02 00:48:41] Set ATHENA_CORE_NUMBER=4
[2026-03-02 00:48:41] Starting ATLAS job with PandaID=7035002687
[2026-03-02 00:48:41] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot192/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-02 04:54:24]  *** The last 200 lines of the pilot log: ***
[2026-03-02 04:54:24] 2026-03-02 03:53:37,309 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-02 04:54:24] 2026-03-02 03:53:37,311 | INFO     | fitting pss+swap vs Time
[2026-03-02 04:54:24] 2026-03-02 03:53:37,312 | INFO     | sum of square deviations: 4340323240.0
[2026-03-02 04:54:24] 2026-03-02 03:53:37,312 | INFO     | sum of deviations: 21662900232.000008
[2026-03-02 04:54:24] 2026-03-02 03:53:37,312 | INFO     | mean x: 1772416275.0
[2026-03-02 04:54:24] 2026-03-02 03:53:37,313 | INFO     | mean y: 2342964.8423236515
[2026-03-02 04:54:24] 2026-03-02 03:53:37,313 | INFO     | intersect: -8843928340.724792
[2026-03-02 04:54:24] 2026-03-02 03:53:37,313 | INFO     | chi2: 1.9270190885102154
[2026-03-02 04:54:24] 2026-03-02 03:53:37,313 | INFO     | sum of square deviations: 4075741535.0
[2026-03-02 04:54:24] 2026-03-02 03:53:37,314 | INFO     | sum of deviations: 36442750021.5
[2026-03-02 04:54:24] 2026-03-02 03:53:37,314 | INFO     | mean x: 1772416122.5
[2026-03-02 04:54:24] 2026-03-02 03:53:37,314 | INFO     | mean y: 2351333.834745763
[2026-03-02 04:54:24] 2026-03-02 03:53:37,314 | INFO     | intersect: -15845493072.310558
[2026-03-02 04:54:24] 2026-03-02 03:53:37,314 | INFO     | chi2: 1.1128640523965023
[2026-03-02 04:54:24] 2026-03-02 03:53:37,314 | INFO     | current chi2=1.1128640523965023 (change=42.24945362337531 %)
[2026-03-02 04:54:24] 2026-03-02 03:53:37,314 | INFO     | sum of square deviations: 3822136780.0
[2026-03-02 04:54:24] 2026-03-02 03:53:37,315 | INFO     | sum of deviations: 35499598491.0
[2026-03-02 04:54:24] 2026-03-02 03:53:37,315 | INFO     | mean x: 1772415970.0
[2026-03-02 04:54:24] 2026-03-02 03:53:37,315 | INFO     | mean y: 2350766.5844155843
[2026-03-02 04:54:24] 2026-03-02 03:53:37,315 | INFO     | intersect: -16459659599.783556
[2026-03-02 04:54:24] 2026-03-02 03:53:37,315 | INFO     | chi2: 1.1130015499137493
[2026-03-02 04:54:24] 2026-03-02 03:53:37,315 | INFO     | current chi2=1.1130015499137493 (change=-0.012355284273125254 %)
[2026-03-02 04:54:24] 2026-03-02 03:53:37,315 | INFO     | right removable region: 230
[2026-03-02 04:54:24] 2026-03-02 03:53:37,316 | INFO     | sum of square deviations: 4075741535.0
[2026-03-02 04:54:24] 2026-03-02 03:53:37,317 | INFO     | sum of deviations: -4850561003.5
[2026-03-02 04:54:24] 2026-03-02 03:53:37,317 | INFO     | mean x: 1772416427.5
[2026-03-02 04:54:24] 2026-03-02 03:53:37,317 | INFO     | mean y: 2358082.834745763
[2026-03-02 04:54:24] 2026-03-02 03:53:37,317 | INFO     | intersect: 2111720006.6384554
[2026-03-02 04:54:24] 2026-03-02 03:53:37,317 | INFO     | chi2: 0.8309077998546445
[2026-03-02 04:54:24] 2026-03-02 03:53:37,317 | INFO     | current chi2=0.8309077998546445 (change=56.88118478904006 %)
[2026-03-02 04:54:24] 2026-03-02 03:53:37,317 | INFO     | sum of square deviations: 3822136780.0
[2026-03-02 04:54:24] 2026-03-02 03:53:37,318 | INFO     | sum of deviations: -6616517561.000001
[2026-03-02 04:54:24] 2026-03-02 03:53:37,318 | INFO     | mean x: 1772416580.0
[2026-03-02 04:54:24] 2026-03-02 03:53:37,318 | INFO     | mean y: 2359140.974025974
[2026-03-02 04:54:24] 2026-03-02 03:53:37,318 | INFO     | intersect: 3070597171.6856227
[2026-03-02 04:54:24] 2026-03-02 03:53:37,318 | INFO     | chi2: 0.8292039845603529
[2026-03-02 04:54:24] 2026-03-02 03:53:37,318 | INFO     | current chi2=0.8292039845603529 (change=0.2050546756920071 %)
[2026-03-02 04:54:24] 2026-03-02 03:53:37,318 | INFO     | left removable region: 20
[2026-03-02 04:54:24] 2026-03-02 03:53:37,318 | INFO     | sum of square deviations: 2871616632.5
[2026-03-02 04:54:24] 2026-03-02 03:53:37,319 | INFO     | sum of deviations: 5530352293.000001
[2026-03-02 04:54:24] 2026-03-02 03:53:37,319 | INFO     | mean x: 1772416549.5
[2026-03-02 04:54:24] 2026-03-02 03:53:37,319 | INFO     | mean y: 2369545.9142857143
[2026-03-02 04:54:24] 2026-03-02 03:53:37,319 | INFO     | intersect: -3411069357.364693
[2026-03-02 04:54:24] 2026-03-02 03:53:37,319 | INFO     | chi2: 0.0004915303426832059
[2026-03-02 04:54:24] 2026-03-02 03:53:37,319 | INFO     | current memory leak: 1.93 B/s (using 210 data points, chi2=0.00)
[2026-03-02 04:54:24] 2026-03-02 03:53:37,320 | INFO     | could have reported an average CPU frequency of 3569 MHz (12 samples)
[2026-03-02 04:54:24] 2026-03-02 03:53:37,320 | INFO     | ..............................
[2026-03-02 04:54:24] 2026-03-02 03:53:37,320 | INFO     | . Timing measurements:
[2026-03-02 04:54:24] 2026-03-02 03:53:37,320 | INFO     | . get job = 0 s
[2026-03-02 04:54:24] 2026-03-02 03:53:37,320 | INFO     | . initial setup = 5 s
[2026-03-02 04:54:24] 2026-03-02 03:53:37,320 | INFO     | . payload setup = 5 s
[2026-03-02 04:54:24] 2026-03-02 03:53:37,320 | INFO     | . stage-in = 0 s
[2026-03-02 04:54:24] 2026-03-02 03:53:37,320 | INFO     | . payload execution = 14659 s
[2026-03-02 04:54:24] 2026-03-02 03:53:37,320 | INFO     | . stage-out = 0 s
[2026-03-02 04:54:24] 2026-03-02 03:53:37,320 | INFO     | . log creation = 0 s
[2026-03-02 04:54:24] 2026-03-02 03:53:37,320 | INFO     | ..............................
[2026-03-02 04:54:24] 2026-03-02 03:53:37,411 | INFO     | 
[2026-03-02 04:54:24] 2026-03-02 03:53:37,411 | INFO     | job summary report
[2026-03-02 04:54:24] 2026-03-02 03:53:37,411 | INFO     | --------------------------------------------------
[2026-03-02 04:54:24] 2026-03-02 03:53:37,411 | INFO     | PanDA job id: 7035002687
[2026-03-02 04:54:24] 2026-03-02 03:53:37,411 | INFO     | task id: 48845071
[2026-03-02 04:54:24] 2026-03-02 03:53:37,411 | INFO     | errors: (none)
[2026-03-02 04:54:24] 2026-03-02 03:53:37,411 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-02 04:54:24] 2026-03-02 03:53:37,411 | INFO     | pilot state: finished 
[2026-03-02 04:54:24] 2026-03-02 03:53:37,411 | INFO     | transexitcode: 0
[2026-03-02 04:54:24] 2026-03-02 03:53:37,411 | INFO     | exeerrorcode: 0
[2026-03-02 04:54:24] 2026-03-02 03:53:37,411 | INFO     | exeerrordiag: 
[2026-03-02 04:54:24] 2026-03-02 03:53:37,411 | INFO     | exitcode: 0
[2026-03-02 04:54:24] 2026-03-02 03:53:37,411 | INFO     | exitmsg: OK
[2026-03-02 04:54:24] 2026-03-02 03:53:37,414 | INFO     | cpuconsumptiontime: 56852 s
[2026-03-02 04:54:24] 2026-03-02 03:53:37,414 | INFO     | nevents: 400
[2026-03-02 04:54:24] 2026-03-02 03:53:37,414 | INFO     | neventsw: 0
[2026-03-02 04:54:24] 2026-03-02 03:53:37,414 | INFO     | pid: 2574193
[2026-03-02 04:54:24] 2026-03-02 03:53:37,415 | INFO     | pgrp: 2574193
[2026-03-02 04:54:24] 2026-03-02 03:53:37,415 | INFO     | corecount: 4
[2026-03-02 04:54:24] 2026-03-02 03:53:37,415 | INFO     | event service: False
[2026-03-02 04:54:24] 2026-03-02 03:53:37,415 | INFO     | sizes: {0: 2281925, 1: 2282442, 11: 2282442, 14668: 2313348, 14670: 2322426, 14672: 2322564}
[2026-03-02 04:54:24] 2026-03-02 03:53:37,415 | INFO     | --------------------------------------------------
[2026-03-02 04:54:24] 2026-03-02 03:53:37,415 | INFO     | 
[2026-03-02 04:54:24] 2026-03-02 03:53:37,415 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot192/slots/0
[2026-03-02 04:54:24] 2026-03-02 03:53:37,432 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-02 04:54:24] 2026-03-02 03:53:37,432 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-02 04:54:24] 2026-03-02 03:53:37,432 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-02 04:54:24] 2026-03-02 03:53:37,432 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-02 04:54:24] 2026-03-02 03:53:37,432 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-02 04:54:24] 2026-03-02 03:53:37,432 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-02 04:54:24] 2026-03-02 03:53:37,432 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-02 04:54:24] 2026-03-02 03:53:37,432 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-02 04:54:24] 2026-03-02 03:53:37,432 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-02 04:54:24] 2026-03-02 03:53:37,432 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-02 04:54:24] 2026-03-02 03:53:37,432 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-02 04:54:24] 2026-03-02 03:53:37,432 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-02 04:54:24] 2026-03-02 03:53:37,432 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-02 04:54:24] 2026-03-02 03:53:37,432 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-02 04:54:24] 2026-03-02 03:53:37,432 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-02 04:54:24] 2026-03-02 03:53:37,432 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-02 04:54:24] 2026-03-02 03:53:37,432 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-02 04:54:24] 2026-03-02 03:53:37,432 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-02 04:54:24] 2026-03-02 03:53:37,432 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-02 04:54:24] 2026-03-02 03:53:37,433 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-02 04:54:24] 2026-03-02 03:53:37,433 | INFO     | job 7035002687 has completed (purged errors)
[2026-03-02 04:54:24] 2026-03-02 03:53:37,433 | INFO     | overall cleanup function is called
[2026-03-02 04:54:24] 2026-03-02 03:53:38,440 | INFO     | --- collectZombieJob: --- 10, [2574193]
[2026-03-02 04:54:24] 2026-03-02 03:53:38,440 | INFO     | zombie collector waiting for pid 2574193
[2026-03-02 04:54:24] 2026-03-02 03:53:38,440 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-02 04:54:24] 2026-03-02 03:53:38,440 | INFO     | collected zombie processes
[2026-03-02 04:54:24] 2026-03-02 03:53:38,440 | INFO     | will attempt to kill all subprocesses of pid=2574193
[2026-03-02 04:54:24] 2026-03-02 03:53:38,914 | INFO     | process IDs to be killed: [2574193] (in reverse order)
[2026-03-02 04:54:24] 2026-03-02 03:53:39,127 | WARNING  | found no corresponding commands to process id(s)
[2026-03-02 04:54:24] 2026-03-02 03:53:39,127 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-02 04:54:24] 2026-03-02 03:53:39,156 | INFO     | did not find any defunct processes belonging to 2574193
[2026-03-02 04:54:24] 2026-03-02 03:53:39,184 | INFO     | did not find any defunct processes belonging to 2574193
[2026-03-02 04:54:24] 2026-03-02 03:53:39,184 | INFO     | ready for new job
[2026-03-02 04:54:24] 2026-03-02 03:53:39,184 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-02 04:54:24] 2026-03-02 03:53:39,186 | INFO     | **************************************
[2026-03-02 04:54:24] 2026-03-02 03:53:39,186 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-02 04:54:24] 2026-03-02 03:53:39,186 | INFO     | **************************************
[2026-03-02 04:54:24] 2026-03-02 03:53:39,186 | INFO     | 
[2026-03-02 04:54:24] 2026-03-02 03:53:39,192 | INFO     | architecture information:
[2026-03-02 04:54:24] 2026-03-02 03:53:39,192 | INFO     | executing command: cat /etc/os-release
[2026-03-02 04:54:24] 2026-03-02 03:53:39,210 | INFO     | cat /etc/os-release:
[2026-03-02 04:54:24] NAME="CentOS Linux"
[2026-03-02 04:54:24] VERSION="7 (Core)"
[2026-03-02 04:54:24] ID="centos"
[2026-03-02 04:54:24] ID_LIKE="rhel fedora"
[2026-03-02 04:54:24] VERSION_ID="7"
[2026-03-02 04:54:24] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-02 04:54:24] ANSI_COLOR="0;31"
[2026-03-02 04:54:24] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-02 04:54:24] HOME_URL="https://www.centos.org/"
[2026-03-02 04:54:24] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-02 04:54:24] 
[2026-03-02 04:54:24] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-02 04:54:24] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-02 04:54:24] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-02 04:54:24] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-02 04:54:24] 
[2026-03-02 04:54:24] 2026-03-02 03:53:39,210 | INFO     | **************************************
[2026-03-02 04:54:24] 2026-03-02 03:53:39,709 | WARNING  | process 2574193 can no longer be monitored (due to stat problems) - aborting
[2026-03-02 04:54:24] 2026-03-02 03:53:39,713 | INFO     | executing command: df -mP /var/lib/boinc/var/slot192/slots/0
[2026-03-02 04:54:24] 2026-03-02 03:53:39,729 | INFO     | sufficient remaining disk space (21082669056 B)
[2026-03-02 04:54:24] 2026-03-02 03:53:39,729 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-02 04:54:24] 2026-03-02 03:53:39,729 | INFO     | current server update state: UPDATING_FINAL
[2026-03-02 04:54:24] 2026-03-02 03:53:39,729 | INFO     | update_server=False
[2026-03-02 04:54:24] 2026-03-02 03:53:39,729 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-02 04:54:24] 2026-03-02 03:53:40,060 | INFO     | using path: /var/lib/boinc/var/slot192/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-02 04:54:24] 2026-03-02 03:53:40,061 | INFO     | reaping zombies for max 20 seconds
[2026-03-02 04:54:24] 2026-03-02 03:53:40,074 | INFO     | checking for looping job (in state=finished)
[2026-03-02 04:54:24] 2026-03-02 03:53:40,074 | INFO     | using looping job limit: 7200 s
[2026-03-02 04:54:24] 2026-03-02 03:53:40,550 | INFO     | number of running child processes to parent process 2574193: 1
[2026-03-02 04:54:24] 2026-03-02 03:53:40,551 | INFO     | maximum number of monitored processes: 6
[2026-03-02 04:54:24] 2026-03-02 03:53:40,551 | INFO     | aborting job monitoring since job object (job id=7035002687) has expired
[2026-03-02 04:54:24] 2026-03-02 03:53:40,551 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-02 04:54:24] 2026-03-02 03:53:40,551 | INFO     | will abort loop
[2026-03-02 04:54:24] 2026-03-02 03:53:40,734 | INFO     | [job] retrieve thread has finished
[2026-03-02 04:54:24] 2026-03-02 03:53:40,757 | INFO     | [payload] validate_post thread has finished
[2026-03-02 04:54:24] 2026-03-02 03:53:40,770 | INFO     | all data control threads have been joined
[2026-03-02 04:54:24] 2026-03-02 03:53:40,785 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-02 04:54:24] 2026-03-02 03:53:41,112 | INFO     | [data] copytool_in thread has finished
[2026-03-02 04:54:24] 2026-03-02 03:53:41,164 | INFO     | [payload] failed_post thread has finished
[2026-03-02 04:54:24] 2026-03-02 03:53:41,199 | INFO     | all payload control threads have been joined
[2026-03-02 04:54:24] 2026-03-02 03:53:41,407 | INFO     | all job control threads have been joined
[2026-03-02 04:54:24] 2026-03-02 03:53:41,556 | INFO     | [job] job monitor thread has finished
[2026-03-02 04:54:24] 2026-03-02 03:53:41,759 | INFO     | [payload] execute_payloads thread has finished
[2026-03-02 04:54:24] 2026-03-02 03:53:41,775 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-02 04:54:24] 2026-03-02 03:53:41,776 | INFO     | [data] control thread has finished
[2026-03-02 04:54:24] 2026-03-02 03:53:41,780 | INFO     | [job] create_data_payload thread has finished
[2026-03-02 04:54:24] 2026-03-02 03:53:41,789 | INFO     | [job] validate thread has finished
[2026-03-02 04:54:24] 2026-03-02 03:53:42,108 | INFO     | [payload] validate_pre thread has finished
[2026-03-02 04:54:24] 2026-03-02 03:53:42,204 | INFO     | [payload] control thread has finished
[2026-03-02 04:54:24] 2026-03-02 03:53:42,377 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-02 04:54:24] 2026-03-02 03:53:42,412 | INFO     | [job] control thread has finished
[2026-03-02 04:54:24] 2026-03-02 03:53:42,790 | INFO     | [data] copytool_out thread has finished
[2026-03-02 04:54:24] 2026-03-02 03:53:43,382 | INFO     | [job] queue monitor thread has finished
[2026-03-02 04:54:24] 2026-03-02 03:53:45,780 | INFO     | [data] queue_monitor thread has finished
[2026-03-02 04:54:24] 2026-03-02 03:53:50,401 | INFO     | job.realtimelogging is not enabled
[2026-03-02 04:54:24] 2026-03-02 03:53:51,406 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-02 04:54:24] 2026-03-02 03:54:09,585 | INFO     | PID=2559586 has CPU usage=8.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-02 04:54:24] 2026-03-02 03:54:09,585 | INFO     | .. there are 44 such processes running
[2026-03-02 04:54:24] 2026-03-02 03:54:09,585 | INFO     | found 0 job(s) in 20 queues
[2026-03-02 04:54:24] 2026-03-02 03:54:09,585 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-02 04:54:24] 2026-03-02 03:54:09,585 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-02 04:54:24] 2026-03-02 03:54:18,486 | INFO     | [monitor] cgroup control has ended
[2026-03-02 04:54:24] 2026-03-02 03:54:19,153 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22588090382144)>', '<ExcThread(monitor, started 22587844589312)>']
[2026-03-02 04:54:24] 2026-03-02 03:54:19,635 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-02 04:54:24] 2026-03-02 03:54:19,635 | INFO     | [monitor] control thread has ended
[2026-03-02 04:54:24] 2026-03-02 03:54:24,178 | INFO     | all workflow threads have been joined
[2026-03-02 04:54:24] 2026-03-02 03:54:24,178 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-02 04:54:24] 2026-03-02 03:54:24,178 | INFO     | traces error code: 0
[2026-03-02 04:54:24] 2026-03-02 03:54:24,179 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-02 04:54:24] 2026-03-02 03:54:24,368 [wrapper] ==== pilot stdout END ====
[2026-03-02 04:54:24] 2026-03-02 03:54:24,371 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-02 04:54:24] 2026-03-02 03:54:24,373 [wrapper] pilotpid: 2559586
[2026-03-02 04:54:24] 2026-03-02 03:54:24,375 [wrapper] Pilot exit status: 0
[2026-03-02 04:54:24] 2026-03-02 03:54:24,382 [wrapper] pandaids: 7035002687
[2026-03-02 04:54:24] 2026-03-02 03:54:24,514 [wrapper] cleanup supervisor_pilot  436518 2559587
[2026-03-02 04:54:24] 2026-03-02 03:54:24,517 [wrapper] Test setup, not cleaning
[2026-03-02 04:54:24] 2026-03-02 03:54:24,519 [wrapper] apfmon messages muted
[2026-03-02 04:54:24] 2026-03-02 03:54:24,521 [wrapper] ==== wrapper stdout END ====
[2026-03-02 04:54:24] 2026-03-02 03:54:24,523 [wrapper] ==== wrapper stderr END ====
[2026-03-02 04:54:24]  *** Error codes and diagnostics ***
[2026-03-02 04:54:24]     "exeErrorCode": 0,
[2026-03-02 04:54:24]     "exeErrorDiag": "",
[2026-03-02 04:54:24]     "pilotErrorCode": 0,
[2026-03-02 04:54:24]     "pilotErrorDiag": "",
[2026-03-02 04:54:24]  *** Listing of results directory ***
[2026-03-02 04:54:24] total 644832
[2026-03-02 04:54:24] -rw-r--r--. 1 boinc boinc    584627 Mar  1 13:02 pilot3.tar.gz
[2026-03-02 04:54:24] -rwx------. 1 boinc boinc     36322 Mar  1 13:02 runpilot2-wrapper.sh
[2026-03-02 04:54:24] -rw-r--r--. 1 boinc boinc      5111 Mar  1 13:03 queuedata.json
[2026-03-02 04:54:24] -rw-r--r--. 1 boinc boinc       100 Mar  2 00:48 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-02 04:54:24] -rwxr-xr-x. 1 boinc boinc      7986 Mar  2 00:48 run_atlas
[2026-03-02 04:54:24] -rw-r--r--. 1 boinc boinc       105 Mar  2 00:48 job.xml
[2026-03-02 04:54:24] -rw-r--r--. 1 boinc boinc      6706 Mar  2 00:48 init_data.xml
[2026-03-02 04:54:24] -rw-r--r--. 2 boinc boinc 307718518 Mar  2 00:48 EVNT.48449521._000002.pool.root.1
[2026-03-02 04:54:24] -rw-r--r--. 2 boinc boinc     15845 Mar  2 00:48 start_atlas.sh
[2026-03-02 04:54:24] drwxrwx--x. 2 boinc boinc      4096 Mar  2 00:48 shared
[2026-03-02 04:54:24] -rw-r--r--. 2 boinc boinc    597986 Mar  2 00:48 input.tar.gz
[2026-03-02 04:54:24] -rw-r--r--. 1 boinc boinc         0 Mar  2 00:48 boinc_lockfile
[2026-03-02 04:54:24] -rw-r--r--. 1 boinc boinc      2676 Mar  2 00:48 pandaJob.out
[2026-03-02 04:54:24] -rw-------. 1 boinc boinc    998184 Mar  2 00:48 agis_schedconf.cvmfs.json
[2026-03-02 04:54:24] -rw-------. 1 boinc boinc       445 Mar  2 00:48 workernode_map.json
[2026-03-02 04:54:24] drwx------. 5 boinc boinc      4096 Mar  2 00:48 pilot3
[2026-03-02 04:54:24] -rw-------. 1 boinc boinc 343738164 Mar  2 04:52 HITS.48845071._000030.pool.root.1
[2026-03-02 04:54:24] -rw-------. 1 boinc boinc        95 Mar  2 04:53 pilot_heartbeat.json
[2026-03-02 04:54:24] -rw-r--r--. 1 boinc boinc       530 Mar  2 04:53 boinc_task_state.xml
[2026-03-02 04:54:24] -rw-------. 1 boinc boinc      1033 Mar  2 04:53 memory_monitor_summary.json
[2026-03-02 04:54:24] -rw-------. 1 boinc boinc   1513015 Mar  2 04:53 agis_ddmendpoints.agis.ALL.json
[2026-03-02 04:54:24] -rw-------. 1 boinc boinc    403777 Mar  2 04:53 log.48845071._000030.job.log.tgz.1
[2026-03-02 04:54:24] -rw-------. 1 boinc boinc      6348 Mar  2 04:53 heartbeat.json
[2026-03-02 04:54:24] -rw-r--r--. 1 boinc boinc      8192 Mar  2 04:54 boinc_mmap_file
[2026-03-02 04:54:24] -rw-r--r--. 1 boinc boinc        28 Mar  2 04:54 wrapper_checkpoint.txt
[2026-03-02 04:54:24] -rw-------. 1 boinc boinc      5658 Mar  2 04:54 pilotlog.txt
[2026-03-02 04:54:24] -rw-------. 1 boinc boinc   2059722 Mar  2 04:54 log.48845071._000030.job.log.1
[2026-03-02 04:54:24] -rw-------. 1 boinc boinc       357 Mar  2 04:54 output.list
[2026-03-02 04:54:24] -rw-r--r--. 1 boinc boinc       620 Mar  2 04:54 runtime_log
[2026-03-02 04:54:24] -rw-------. 1 boinc boinc   2478080 Mar  2 04:54 result.tar.gz
[2026-03-02 04:54:24] -rw-r--r--. 1 boinc boinc      9222 Mar  2 04:54 runtime_log.err
[2026-03-02 04:54:24] -rw-------. 1 boinc boinc       665 Mar  2 04:54 N1rKDmoguG9n9Rq4apOajLDm4fhM0noT9bVooX4SDmwJ8KDmzXxJwm.diag
[2026-03-02 04:54:24] -rw-r--r--. 1 boinc boinc     20836 Mar  2 04:54 stderr.txt
[2026-03-02 04:54:24] HITS file was successfully produced:
[2026-03-02 04:54:24] -rw-------. 1 boinc boinc 343738164 Mar  2 04:52 shared/HITS.pool.root.1
[2026-03-02 04:54:24]  *** Contents of shared directory: ***
[2026-03-02 04:54:24] total 639220
[2026-03-02 04:54:24] -rw-r--r--. 2 boinc boinc 307718518 Mar  2 00:48 ATLAS.root_0
[2026-03-02 04:54:24] -rw-r--r--. 2 boinc boinc     15845 Mar  2 00:48 start_atlas.sh
[2026-03-02 04:54:24] -rw-r--r--. 2 boinc boinc    597986 Mar  2 00:48 input.tar.gz
[2026-03-02 04:54:24] -rw-------. 1 boinc boinc 343738164 Mar  2 04:52 HITS.pool.root.1
[2026-03-02 04:54:24] -rw-------. 1 boinc boinc   2478080 Mar  2 04:54 result.tar.gz
04:54:26 (2553559): run_atlas exited; CPU time 57576.541369
04:54:26 (2553559): called boinc_finish(0)

</stderr_txt>
]]>

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