Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
06:12:02 (80563): wrapper (7.7.26015): starting
06:12:02 (80563): wrapper: running run_atlas (--nthreads 12)
[2026-03-01 06:12:02] Arguments: --nthreads 12
[2026-03-01 06:12:02] Threads: 12
[2026-03-01 06:12:02] Checking for CVMFS
[2026-03-01 06:12:03] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-01 06:12:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-01 06:12:03] Running cvmfs_config stat atlas.cern.ch
[2026-03-01 06:12:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-01 06:12:14] 2.11.5.0 3233586 65631 276728 156771 0 516 33750742 45568001 22282 130560 0 674470925 99.836 356084082 21595 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.164:3129 1
[2026-03-01 06:12:14] CVMFS is ok
[2026-03-01 06:12:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-01 06:12:14] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-01 06:12:14] Further information can be found at the LHC@home message board.
[2026-03-01 06:12:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-01 06:12:14] Checking for apptainer binary...
[2026-03-01 06:12:14] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-01 06:12:14] Running /usr/bin/apptainer --version
[2026-03-01 06:12:14] apptainer version 1.4.1-1.el9
[2026-03-01 06:12:14] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-01 06:12:15] wns0038.triumf.lcg
[2026-03-01 06:12:15] apptainer works
[2026-03-01 06:12:15] Set ATHENA_PROC_NUMBER=12
[2026-03-01 06:12:15] Set ATHENA_CORE_NUMBER=12
[2026-03-01 06:12:16] Starting ATLAS job with PandaID=7035002210
[2026-03-01 06:12:16] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-01 06:19:12]  *** The last 200 lines of the pilot log: ***
[2026-03-01 06:19:12] 2026-03-01 14:18:36,437 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-01 06:19:12] 2026-03-01 14:18:36,437 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-01 06:19:12] 2026-03-01 14:18:36,438 | WARNING  | wrong length of table data, x=[1772374527.0, 1772374588.0], y=[2999.0, 471867.0] (must be same and length>=4)
[2026-03-01 06:19:12] 2026-03-01 14:18:36,438 | INFO     | could have reported an average CPU frequency of 2769 MHz (4 samples)
[2026-03-01 06:19:12] 2026-03-01 14:18:36,438 | INFO     | ..............................
[2026-03-01 06:19:12] 2026-03-01 14:18:36,438 | INFO     | . Timing measurements:
[2026-03-01 06:19:12] 2026-03-01 14:18:36,438 | INFO     | . get job = 0 s
[2026-03-01 06:19:12] 2026-03-01 14:18:36,438 | INFO     | . initial setup = 38 s
[2026-03-01 06:19:12] 2026-03-01 14:18:36,438 | INFO     | . payload setup = 46 s
[2026-03-01 06:19:12] 2026-03-01 14:18:36,438 | INFO     | . stage-in = 0 s
[2026-03-01 06:19:12] 2026-03-01 14:18:36,438 | INFO     | . payload execution = 100 s
[2026-03-01 06:19:12] 2026-03-01 14:18:36,438 | INFO     | . stage-out = 1 s
[2026-03-01 06:19:12] 2026-03-01 14:18:36,438 | INFO     | . log creation = 0 s
[2026-03-01 06:19:12] 2026-03-01 14:18:36,438 | INFO     | ..............................
[2026-03-01 06:19:12] 2026-03-01 14:18:36,438 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-03-01 06:19:12] 2026-03-01 14:18:36,438 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7035002210/pilotlog.txt
[2026-03-01 06:19:12] 2026-03-01 14:18:36,748 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-03-01 06:19:12] - Log from pilotlog.txt -
[2026-03-01 06:19:12] 2026-03-01 14:18:36,430 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-7035002210/memory_monitor_summary.json (trf name=prmon)
[2026-03-01 06:19:12] 2026-03-01 14:18:36,430 | INFO     | extracted standard info from prmon json
[2026-03-01 06:19:12] 2026-03-01 14:18:36,431 | INFO     | extracted standard memory fields from prmon json
[2026-03-01 06:19:12] 2026-03-01 14:18:36,431 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-01 06:19:12] 2026-03-01 14:18:36,437 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-01 06:19:12] 2026-03-01 14:18:36,437 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-01 06:19:12] 2026-03-01 14:18:36,438 | WARNING  | wrong length of table data, x=[1772374527.0, 1772374588.0], y=[2999.0, 471867.0] (must be same and length>=4)
[2026-03-01 06:19:12] 2026-03-01 14:18:36,438 | INFO     | could have reported an average CPU frequency of 2769 MHz (4 samples)
[2026-03-01 06:19:12] 2026-03-01 14:18:36,438 | INFO     | ..............................
[2026-03-01 06:19:12] 2026-03-01 14:18:36,438 | INFO     | . Timing measurements:
[2026-03-01 06:19:12] 2026-03-01 14:18:36,438 | INFO     | . get job = 0 s
[2026-03-01 06:19:12] 2026-03-01 14:18:36,438 | INFO     | . initial setup = 38 s
[2026-03-01 06:19:12] 2026-03-01 14:18:36,438 | INFO     | . payload setup = 46 s
[2026-03-01 06:19:12] 2026-03-01 14:18:36,438 | INFO     | . stage-in = 0 s
[2026-03-01 06:19:12] 2026-03-01 14:18:36,438 | INFO     | . payload execution = 100 s
[2026-03-01 06:19:12] 2026-03-01 14:18:36,438 | INFO     | . stage-out = 1 s
[2026-03-01 06:19:12] 2026-03-01 14:18:36,438 | INFO     | . log creation = 0 s
[2026-03-01 06:19:12] 2026-03-01 14:18:36,438 | INFO     | ..............................
[2026-03-01 06:19:12] 2026-03-01 14:18:36,438 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-03-01 06:19:12] 2026-03-01 14:18:36,438 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7035002210/pilotlog.txt
[2026-03-01 06:19:12] 2026-03-01 14:18:36,748 | WARNING  | 
[2026-03-01 06:19:12] [begin log extracts]
[2026-03-01 06:19:12] - Log from pilotlog.txt -
[2026-03-01 06:19:12] 2026-03-01 14:18:36,430 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-7035002210/memory_monitor_summary.json (trf name=prmon)
[2026-03-01 06:19:12] 2026-03-01 14:18:36,430 | INFO     | extracted standard info from prmon json
[2026-03-01 06:19:12] 2026-03-01 14:18:36,431 | INFO     | extracted standard memory fields from prmon json
[2026-03-01 06:19:12] 2026-03-01 14:18:36,431 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-01 06:19:12] 2026-03-01 14:18:36,437 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-01 06:19:12] 2026-03-01 14:18:36,437 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-01 06:19:12] 2026-03-01 14:18:36,438 | WARNING  | wrong length of table data, x=[1772374527.0, 1772374588.0], y=[2999.0, 471867.0] (must be same and length>=4)
[2026-03-01 06:19:12] 2026-03-01 14:18:36,438 | INFO     | could have reported an average CPU frequency of 2769 MHz (4 samples)
[2026-03-01 06:19:12] 2026-03-01 14:18:36,438 | INFO     | ..............................
[2026-03-01 06:19:12] 2026-03-01 14:18:36,438 | INFO     | . Timing measurements:
[2026-03-01 06:19:12] 2026-03-01 14:18:36,438 | INFO     | . get job = 0 s
[2026-03-01 06:19:12] 2026-03-01 14:18:36,438 | INFO     | . initial setup = 38 s
[2026-03-01 06:19:12] 2026-03-01 14:18:36,438 | INFO     | . payload setup = 46 s
[2026-03-01 06:19:12] 2026-03-01 14:18:36,438 | INFO     | . stage-in = 0 s
[2026-03-01 06:19:12] 2026-03-01 14:18:36,438 | INFO     | . payload execution = 100 s
[2026-03-01 06:19:12] 2026-03-01 14:18:36,438 | INFO     | . stage-out = 1 s
[2026-03-01 06:19:12] 2026-03-01 14:18:36,438 | INFO     | . log creation = 0 s
[2026-03-01 06:19:12] 2026-03-01 14:18:36,438 | INFO     | ..............................
[2026-03-01 06:19:12] 2026-03-01 14:18:36,438 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-03-01 06:19:12] 2026-03-01 14:18:36,438 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7035002210/pilotlog.txt
[2026-03-01 06:19:12] [end log extracts]
[2026-03-01 06:19:12] 2026-03-01 14:18:36,748 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2026-03-01 06:19:12] 2026-03-01 14:18:36,753 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2026-03-01 06:19:12] 2026-03-01 14:18:36,918 | INFO     | 
[2026-03-01 06:19:12] 2026-03-01 14:18:36,918 | INFO     | job summary report
[2026-03-01 06:19:12] 2026-03-01 14:18:36,918 | INFO     | --------------------------------------------------
[2026-03-01 06:19:12] 2026-03-01 14:18:36,918 | INFO     | PanDA job id: 7035002210
[2026-03-01 06:19:12] 2026-03-01 14:18:36,918 | INFO     | task id: 48844985
[2026-03-01 06:19:12] 2026-03-01 14:18:36,918 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-03-01 06:16:22,752 CRITICAL Transform executor raised TransformValidationExceptio
[2026-03-01 06:19:12] 2026-03-01 14:18:36,918 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-01 06:19:12] 2026-03-01 14:18:36,918 | INFO     | pilot state: failed 
[2026-03-01 06:19:12] 2026-03-01 14:18:36,918 | INFO     | transexitcode: 65
[2026-03-01 06:19:12] 2026-03-01 14:18:36,918 | INFO     | exeerrorcode: 65
[2026-03-01 06:19:12] 2026-03-01 14:18:36,919 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2026-03-01 06:19:12] 2026-03-01 14:18:36,919 | INFO     | exitcode: 65
[2026-03-01 06:19:12] 2026-03-01 14:18:36,919 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2026-03-01 06:19:12] 2026-03-01 14:18:36,919 | INFO     | cpuconsumptiontime: 14 s
[2026-03-01 06:19:12] 2026-03-01 14:18:36,919 | INFO     | nevents: 0
[2026-03-01 06:19:12] 2026-03-01 14:18:36,919 | INFO     | neventsw: 0
[2026-03-01 06:19:12] 2026-03-01 14:18:36,919 | INFO     | pid: 89609
[2026-03-01 06:19:12] 2026-03-01 14:18:36,919 | INFO     | pgrp: 89609
[2026-03-01 06:19:12] 2026-03-01 14:18:36,919 | INFO     | corecount: 12
[2026-03-01 06:19:12] 2026-03-01 14:18:36,919 | INFO     | event service: False
[2026-03-01 06:19:12] 2026-03-01 14:18:36,919 | INFO     | sizes: {0: 2281310, 1: 2281992, 2: 2282453, 13: 2282453, 150: 2305692, 153: 2309984, 157: 2310140, 273: 2310306}
[2026-03-01 06:19:12] 2026-03-01 14:18:36,919 | INFO     | --------------------------------------------------
[2026-03-01 06:19:12] 2026-03-01 14:18:36,919 | INFO     | 
[2026-03-01 06:19:12] 2026-03-01 14:18:36,919 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2026-03-01 06:19:12] 2026-03-01 14:18:37,224 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-01 06:19:12] 2026-03-01 14:18:37,225 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-01 06:19:12] 2026-03-01 14:18:37,225 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-01 06:19:12] 2026-03-01 14:18:37,225 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-01 06:19:12] 2026-03-01 14:18:37,225 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-01 06:19:12] 2026-03-01 14:18:37,225 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-01 06:19:12] 2026-03-01 14:18:37,225 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-01 06:19:12] 2026-03-01 14:18:37,225 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-01 06:19:12] 2026-03-01 14:18:37,225 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-01 06:19:12] 2026-03-01 14:18:37,225 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-01 06:19:12] 2026-03-01 14:18:37,225 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-01 06:19:12] 2026-03-01 14:18:37,225 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-01 06:19:12] 2026-03-01 14:18:37,225 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-01 06:19:12] 2026-03-01 14:18:37,225 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-01 06:19:12] 2026-03-01 14:18:37,225 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-01 06:19:12] 2026-03-01 14:18:37,225 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-01 06:19:12] 2026-03-01 14:18:37,225 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-01 06:19:12] 2026-03-01 14:18:37,225 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-01 06:19:12] 2026-03-01 14:18:37,225 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-01 06:19:12] 2026-03-01 14:18:37,225 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-01 06:19:12] 2026-03-01 14:18:37,226 | INFO     | job 7035002210 has completed (purged errors)
[2026-03-01 06:19:12] 2026-03-01 14:18:37,226 | INFO     | overall cleanup function is called
[2026-03-01 06:19:12] 2026-03-01 14:18:38,241 | INFO     | --- collectZombieJob: --- 10, [89609]
[2026-03-01 06:19:12] 2026-03-01 14:18:38,241 | INFO     | zombie collector waiting for pid 89609
[2026-03-01 06:19:12] 2026-03-01 14:18:38,241 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-01 06:19:12] 2026-03-01 14:18:38,241 | INFO     | collected zombie processes
[2026-03-01 06:19:12] 2026-03-01 14:18:38,241 | INFO     | will attempt to kill all subprocesses of pid=89609
[2026-03-01 06:19:12] 2026-03-01 14:18:38,720 | INFO     | process IDs to be killed: [89609] (in reverse order)
[2026-03-01 06:19:12] 2026-03-01 14:18:38,994 | WARNING  | found no corresponding commands to process id(s)
[2026-03-01 06:19:12] 2026-03-01 14:18:38,994 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-01 06:19:12] 2026-03-01 14:18:39,018 | INFO     | did not find any defunct processes belonging to 89609
[2026-03-01 06:19:12] 2026-03-01 14:18:39,044 | INFO     | did not find any defunct processes belonging to 89609
[2026-03-01 06:19:12] 2026-03-01 14:18:39,044 | INFO     | ready for new job
[2026-03-01 06:19:12] 2026-03-01 14:18:39,045 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-01 06:19:12] 2026-03-01 14:18:39,046 | INFO     | **************************************
[2026-03-01 06:19:12] 2026-03-01 14:18:39,046 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-01 06:19:12] 2026-03-01 14:18:39,046 | INFO     | **************************************
[2026-03-01 06:19:12] 2026-03-01 14:18:39,046 | INFO     | 
[2026-03-01 06:19:12] 2026-03-01 14:18:39,057 | INFO     | architecture information:
[2026-03-01 06:19:12] 2026-03-01 14:18:39,057 | INFO     | executing command: cat /etc/os-release
[2026-03-01 06:19:12] 2026-03-01 14:18:39,119 | INFO     | cat /etc/os-release:
[2026-03-01 06:19:12] NAME="CentOS Linux"
[2026-03-01 06:19:12] VERSION="7 (Core)"
[2026-03-01 06:19:12] ID="centos"
[2026-03-01 06:19:12] ID_LIKE="rhel fedora"
[2026-03-01 06:19:12] VERSION_ID="7"
[2026-03-01 06:19:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-01 06:19:12] ANSI_COLOR="0;31"
[2026-03-01 06:19:12] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-01 06:19:12] HOME_URL="https://www.centos.org/"
[2026-03-01 06:19:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-01 06:19:12] 
[2026-03-01 06:19:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-01 06:19:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-01 06:19:12] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-01 06:19:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-01 06:19:12] 
[2026-03-01 06:19:12] 2026-03-01 14:18:39,119 | INFO     | **************************************
[2026-03-01 06:19:12] 2026-03-01 14:18:39,623 | INFO     | executing command: df -mP /home/boinc/slots/0
[2026-03-01 06:19:12] 2026-03-01 14:18:39,722 | INFO     | sufficient remaining disk space (2170976993280 B)
[2026-03-01 06:19:12] 2026-03-01 14:18:39,723 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-01 06:19:12] 2026-03-01 14:18:39,723 | INFO     | current server update state: UPDATING_FINAL
[2026-03-01 06:19:12] 2026-03-01 14:18:39,723 | INFO     | update_server=False
[2026-03-01 06:19:12] 2026-03-01 14:18:39,723 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-01 06:19:12] 2026-03-01 14:18:39,724 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-01 06:19:12] 2026-03-01 14:18:39,724 | INFO     | aborting loop
[2026-03-01 06:19:12] 2026-03-01 14:18:39,830 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-01 06:19:12] 2026-03-01 14:18:40,729 | INFO     | [job] retrieve thread has finished
[2026-03-01 06:19:12] 2026-03-01 14:18:40,730 | INFO     | [job] job monitor thread has finished
[2026-03-01 06:19:12] 2026-03-01 14:18:40,781 | INFO     | all data control threads have been joined
[2026-03-01 06:19:12] 2026-03-01 14:18:40,836 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-01 06:19:12] 2026-03-01 14:18:41,042 | INFO     | [job] validate thread has finished
[2026-03-01 06:19:12] 2026-03-01 14:18:41,076 | INFO     | [job] create_data_payload thread has finished
[2026-03-01 06:19:12] 2026-03-01 14:18:41,209 | INFO     | all payload control threads have been joined
[2026-03-01 06:19:12] 2026-03-01 14:18:41,234 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-01 06:19:12] 2026-03-01 14:18:41,234 | INFO     | [data] copytool_in thread has finished
[2026-03-01 06:19:12] 2026-03-01 14:18:41,413 | INFO     | all job control threads have been joined
[2026-03-01 06:19:12] 2026-03-01 14:18:41,514 | INFO     | [payload] failed_post thread has finished
[2026-03-01 06:19:12] 2026-03-01 14:18:41,597 | INFO     | [payload] validate_post thread has finished
[2026-03-01 06:19:12] 2026-03-01 14:18:41,628 | INFO     | [payload] validate_pre thread has finished
[2026-03-01 06:19:12] 2026-03-01 14:18:41,689 | INFO     | [payload] execute_payloads thread has finished
[2026-03-01 06:19:12] 2026-03-01 14:18:41,787 | INFO     | [data] control thread has finished
[2026-03-01 06:19:12] 2026-03-01 14:18:41,950 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-01 06:19:12] 2026-03-01 14:18:42,228 | INFO     | [payload] control thread has finished
[2026-03-01 06:19:12] 2026-03-01 14:18:42,419 | INFO     | [job] control thread has finished
[2026-03-01 06:19:12] 2026-03-01 14:18:42,843 | INFO     | [data] copytool_out thread has finished
[2026-03-01 06:19:12] 2026-03-01 14:18:42,956 | INFO     | [job] queue monitor thread has finished
[2026-03-01 06:19:12] 2026-03-01 14:18:43,839 | INFO     | [data] queue_monitor thread has finished
[2026-03-01 06:19:12] 2026-03-01 14:18:50,512 | INFO     | [monitor] cgroup control has ended
[2026-03-01 06:19:12] 2026-03-01 14:18:51,242 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140291640751936)>', '<ExcThread(monitor, started 140290794968832)>']
[2026-03-01 06:19:12] 2026-03-01 14:18:56,268 | INFO     | all workflow threads have been joined
[2026-03-01 06:19:12] 2026-03-01 14:18:56,268 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-01 06:19:12] 2026-03-01 14:18:56,268 | INFO     | traces error code: 0
[2026-03-01 06:19:12] 2026-03-01 14:18:56,268 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-01 06:19:12] 2026-03-01 14:19:10,032 | INFO     | PID=84750 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-01 06:19:12] 2026-03-01 14:19:10,032 | INFO     | .. there are 35 such processes running
[2026-03-01 06:19:12] 2026-03-01 14:19:10,032 | INFO     | found 0 job(s) in 20 queues
[2026-03-01 06:19:12] 2026-03-01 14:19:10,032 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-01 06:19:12] 2026-03-01 14:19:10,032 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-01 06:19:12] 2026-03-01 14:19:10,032 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-01 06:19:12] 2026-03-01 14:19:10,032 | CRITICAL | thread 'MainThread' is not alive
[2026-03-01 06:19:12] 2026-03-01 14:19:10,032 | INFO     | [monitor] control thread has ended
[2026-03-01 06:19:12] 2026-03-01 14:19:10,622 [wrapper] ==== pilot stdout END ====
[2026-03-01 06:19:12] 2026-03-01 14:19:10,653 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-01 06:19:12] 2026-03-01 14:19:10,679 [wrapper] pilotpid: 84750
[2026-03-01 06:19:12] 2026-03-01 14:19:10,707 [wrapper] Pilot exit status: 0
[2026-03-01 06:19:12] 2026-03-01 14:19:10,868 [wrapper] pandaids: 7035002210
[2026-03-01 06:19:12] 2026-03-01 14:19:11,425 [wrapper] cleanup supervisor_pilot   84759 84751
[2026-03-01 06:19:12] 2026-03-01 14:19:11,478 [wrapper] Test setup, not cleaning
[2026-03-01 06:19:12] 2026-03-01 14:19:11,527 [wrapper] apfmon messages muted
[2026-03-01 06:19:12] 2026-03-01 14:19:11,587 [wrapper] ==== wrapper stdout END ====
[2026-03-01 06:19:12] 2026-03-01 14:19:11,653 [wrapper] ==== wrapper stderr END ====
[2026-03-01 06:19:12]  *** Error codes and diagnostics ***
[2026-03-01 06:19:12]     "exeErrorCode": 65,
[2026-03-01 06:19:12]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2026-03-01 06:19:12]     "pilotErrorCode": 1305,
[2026-03-01 06:19:12]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2026-03-01 06:19:12]  *** Listing of results directory ***
[2026-03-01 06:19:12] total 317736
[2026-03-01 06:19:12] -rwx------. 1 boinc boinc     36322 Mar  1 04:02 runpilot2-wrapper.sh
[2026-03-01 06:19:12] -rw-r--r--. 1 boinc boinc    584627 Mar  1 04:02 pilot3.tar.gz
[2026-03-01 06:19:12] -rw-r--r--. 1 boinc boinc      5111 Mar  1 04:03 queuedata.json
[2026-03-01 06:19:12] -rw-r--r--. 1 boinc boinc       100 Mar  1 06:12 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-01 06:19:12] -rwxr-xr-x. 1 boinc boinc      7986 Mar  1 06:12 run_atlas
[2026-03-01 06:19:12] -rw-r--r--. 1 boinc boinc       105 Mar  1 06:12 job.xml
[2026-03-01 06:19:12] -rw-r--r--. 2 boinc boinc    597983 Mar  1 06:12 input.tar.gz
[2026-03-01 06:19:12] -rw-r--r--. 1 boinc boinc      6594 Mar  1 06:12 init_data.xml
[2026-03-01 06:19:12] -rw-r--r--. 2 boinc boinc 321207217 Mar  1 06:12 EVNT.48449408._000001.pool.root.1
[2026-03-01 06:19:12] -rw-r--r--. 2 boinc boinc     15845 Mar  1 06:12 start_atlas.sh
[2026-03-01 06:19:12] drwxrwx--x. 2 boinc boinc      4096 Mar  1 06:12 shared
[2026-03-01 06:19:12] -rw-r--r--. 1 boinc boinc         0 Mar  1 06:12 boinc_lockfile
[2026-03-01 06:19:12] -rw-r--r--. 1 boinc boinc      2675 Mar  1 06:12 pandaJob.out
[2026-03-01 06:19:12] -rw-------. 1 boinc boinc    998184 Mar  1 06:13 agis_schedconf.cvmfs.json
[2026-03-01 06:19:12] -rw-------. 1 boinc boinc   1513015 Mar  1 06:13 agis_ddmendpoints.agis.ALL.json
[2026-03-01 06:19:12] -rw-------. 1 boinc boinc       445 Mar  1 06:13 workernode_map.json
[2026-03-01 06:19:12] drwx------. 5 boinc boinc      4096 Mar  1 06:13 pilot3
[2026-03-01 06:19:12] -rw-r--r--. 1 boinc boinc       524 Mar  1 06:16 boinc_task_state.xml
[2026-03-01 06:19:12] -rw-------. 1 boinc boinc       988 Mar  1 06:16 memory_monitor_summary.json
[2026-03-01 06:19:12] -rw-------. 1 boinc boinc     22548 Mar  1 06:16 log.48844985._000018.job.log.tgz.1
[2026-03-01 06:19:12] -rw-------. 1 boinc boinc        95 Mar  1 06:18 pilot_heartbeat.json
[2026-03-01 06:19:12] -rw-------. 1 boinc boinc      7014 Mar  1 06:18 heartbeat.json
[2026-03-01 06:19:12] -rw-r--r--. 1 boinc boinc      8192 Mar  1 06:19 boinc_mmap_file
[2026-03-01 06:19:12] -rw-r--r--. 1 boinc boinc        23 Mar  1 06:19 wrapper_checkpoint.txt
[2026-03-01 06:19:12] -rw-------. 1 boinc boinc       891 Mar  1 06:19 pilotlog.txt
[2026-03-01 06:19:12] -rw-------. 1 boinc boinc     95411 Mar  1 06:19 log.48844985._000018.job.log.1
[2026-03-01 06:19:12] -rw-------. 1 boinc boinc       188 Mar  1 06:19 output.list
[2026-03-01 06:19:12] -rw-r--r--. 1 boinc boinc       620 Mar  1 06:19 runtime_log
[2026-03-01 06:19:12] -rw-------. 1 boinc boinc    133120 Mar  1 06:19 result.tar.gz
[2026-03-01 06:19:12] -rw-r--r--. 1 boinc boinc      8635 Mar  1 06:19 runtime_log.err
[2026-03-01 06:19:12] -rw-------. 1 boinc boinc       644 Mar  1 06:19 i5NMDmhguG9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmL59KDmTKn5Ao.diag
[2026-03-01 06:19:12] -rw-r--r--. 1 boinc boinc     21779 Mar  1 06:19 stderr.txt
[2026-03-01 06:19:12] No HITS result produced
[2026-03-01 06:19:12]  *** Contents of shared directory: ***
[2026-03-01 06:19:12] total 314416
[2026-03-01 06:19:12] -rw-r--r--. 2 boinc boinc    597983 Mar  1 06:12 input.tar.gz
[2026-03-01 06:19:12] -rw-r--r--. 2 boinc boinc 321207217 Mar  1 06:12 ATLAS.root_0
[2026-03-01 06:19:12] -rw-r--r--. 2 boinc boinc     15845 Mar  1 06:12 start_atlas.sh
[2026-03-01 06:19:12] -rw-------. 1 boinc boinc    133120 Mar  1 06:19 result.tar.gz
06:19:14 (80563): run_atlas exited; CPU time 26.467167
06:19:14 (80563): called boinc_finish(0)

</stderr_txt>
]]>

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