Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
18:32:09 (3085503): wrapper (7.7.26015): starting
18:32:09 (3085503): wrapper: running run_atlas (--nthreads 4)
[2026-03-01 18:32:09] Arguments: --nthreads 4
[2026-03-01 18:32:09] Threads: 4
[2026-03-01 18:32:09] Checking for CVMFS
[2026-03-01 18:32:09] No cvmfs_config command found, will try listing directly
[2026-03-01 18:32:09] CVMFS is ok
[2026-03-01 18:32:09] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-01 18:32:09] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-01 18:32:09] Further information can be found at the LHC@home message board.
[2026-03-01 18:32:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-01 18:32:09] Checking for apptainer binary...
[2026-03-01 18:32:09] which: no apptainer in ((null))
[2026-03-01 18:32:09] apptainer is not installed, using version from CVMFS
[2026-03-01 18:32:09] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-01 18:32:09] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot68/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut20.grid.cesnet.cz
[2026-03-01 18:32:09] apptainer works
[2026-03-01 18:32:09] Set ATHENA_PROC_NUMBER=4
[2026-03-01 18:32:09] Set ATHENA_CORE_NUMBER=4
[2026-03-01 18:32:10] Starting ATLAS job with PandaID=7034854587
[2026-03-01 18:32:10] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot68/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-01 19:35:42]  *** The last 200 lines of the pilot log: ***
[2026-03-01 19:35:42]  protocol_id=None
[2026-03-01 19:35:42]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-01 19:35:42]  replicas=None
[2026-03-01 19:35:42]  scope=mc23_13p6TeV
[2026-03-01 19:35:42]  status=None
[2026-03-01 19:35:42]  status_code=0
[2026-03-01 19:35:42]  storage_token=
[2026-03-01 19:35:42]  surl=/var/lib/boinc/var/slot68/slots/0/PanDA_Pilot-7034854587/log.48700922._002375.job.log.tgz.1
[2026-03-01 19:35:42]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/55/86/log.48700922._002375.job.log.tgz.1
[2026-03-01 19:35:42]  workdir=None
[2026-03-01 19:35:42] ]
[2026-03-01 19:35:42] 2026-03-01 18:35:05,610 | INFO     | time since job start (3763s) is within the limit (349056.0s)
[2026-03-01 19:35:42] 2026-03-01 18:35:05,623 | INFO     | transferring file log.48700922._002375.job.log.tgz.1 from /var/lib/boinc/var/slot68/slots/0/PanDA_Pilot-7034854587/log.48700922._002375.job.log.tgz.1 to /var/lib/b
[2026-03-01 19:35:42] 2026-03-01 18:35:05,623 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot68/slots/0/PanDA_Pilot-7034854587/log.48700922._002375.job.log.tgz.1 /var/lib/boinc/var/slot68/slots/0/lo
[2026-03-01 19:35:42] 2026-03-01 18:35:05,642 | INFO     | adding to output.list: log.48700922._002375.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/55/86/log.48700922._002375.job.log.tg
[2026-03-01 19:35:42] 2026-03-01 18:35:05,643 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-01 19:35:42] 2026-03-01 18:35:05,643 | INFO     | summary of transferred files:
[2026-03-01 19:35:42] 2026-03-01 18:35:05,643 | INFO     |  -- lfn=log.48700922._002375.job.log.tgz.1, status_code=0, status=transferred
[2026-03-01 19:35:42] 2026-03-01 18:35:05,643 | INFO     | stage-out finished correctly
[2026-03-01 19:35:42] 2026-03-01 18:35:06,655 | INFO     | monitor loop #274: job 0:7034854587 is in state 'finished'
[2026-03-01 19:35:42] 2026-03-01 18:35:06,658 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-01 19:35:42] 2026-03-01 18:35:06,726 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-01 19:35:42] 2026-03-01 18:35:07,231 | INFO     | PID=3092129 has CPU usage=14.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-03-01 19:35:42] 2026-03-01 18:35:07,232 | INFO     | .. there are 50 such processes running
[2026-03-01 19:35:42] 2026-03-01 18:35:07,965 | INFO     | job 7034854587 has state=finished
[2026-03-01 19:35:42] 2026-03-01 18:35:07,965 | INFO     | preparing for final server update for job 7034854587 in state='finished'
[2026-03-01 19:35:42] 2026-03-01 18:35:08,232 | INFO     | time since job start (3766s) is within the limit (349056.0s)
[2026-03-01 19:35:42] 2026-03-01 18:35:08,517 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2026-03-01 19:35:42] 2026-03-01 18:35:08,517 | INFO     | reading metadata from: /var/lib/boinc/var/slot68/slots/0/PanDA_Pilot-7034854587/jobReport.json
[2026-03-01 19:35:42] 2026-03-01 18:35:08,519 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot68/slots/0/workernode_map.json
[2026-03-01 19:35:42] 2026-03-01 18:35:08,519 | INFO     | this job has now completed (state=finished)
[2026-03-01 19:35:42] 2026-03-01 18:35:08,519 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-01 19:35:42] 2026-03-01 18:35:08,519 | INFO     | log transfer has been attempted: DONE
[2026-03-01 19:35:42] 2026-03-01 18:35:08,519 | INFO     | job 7034854587 has finished - writing final server update
[2026-03-01 19:35:42] 2026-03-01 18:35:08,519 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_198507/.job.ad'
[2026-03-01 19:35:42] 2026-03-01 18:35:08,519 | INFO     | total number of processed events: 400 (read)
[2026-03-01 19:35:42] 2026-03-01 18:35:08,537 | INFO     | using path: /var/lib/boinc/var/slot68/slots/0/PanDA_Pilot-7034854587/memory_monitor_summary.json (trf name=prmon)
[2026-03-01 19:35:42] 2026-03-01 18:35:08,538 | INFO     | extracted standard info from prmon json
[2026-03-01 19:35:42] 2026-03-01 18:35:08,538 | INFO     | extracted standard memory fields from prmon json
[2026-03-01 19:35:42] 2026-03-01 18:35:08,538 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-01 19:35:42] 2026-03-01 18:35:08,538 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-01 19:35:42] 2026-03-01 18:35:08,538 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-01 19:35:42] 2026-03-01 18:35:08,539 | INFO     | fitting pss+swap vs Time
[2026-03-01 19:35:42] 2026-03-01 18:35:08,539 | INFO     | sum of square deviations: 51573060.0
[2026-03-01 19:35:42] 2026-03-01 18:35:08,539 | INFO     | sum of deviations: -164076457.99999997
[2026-03-01 19:35:42] 2026-03-01 18:35:08,539 | INFO     | mean x: 1772388314.0
[2026-03-01 19:35:42] 2026-03-01 18:35:08,539 | INFO     | mean y: 2318092.2
[2026-03-01 19:35:42] 2026-03-01 18:35:08,539 | INFO     | intersect: 5641060427.087861
[2026-03-01 19:35:42] 2026-03-01 18:35:08,539 | INFO     | chi2: 0.000267961892479212
[2026-03-01 19:35:42] 2026-03-01 18:35:08,539 | INFO     | current memory leak: -3.18 B/s (using 55 data points, chi2=0.00)
[2026-03-01 19:35:42] 2026-03-01 18:35:08,540 | INFO     | could have reported an average CPU frequency of 3572 MHz (6 samples)
[2026-03-01 19:35:42] 2026-03-01 18:35:08,540 | INFO     | ..............................
[2026-03-01 19:35:42] 2026-03-01 18:35:08,540 | INFO     | . Timing measurements:
[2026-03-01 19:35:42] 2026-03-01 18:35:08,540 | INFO     | . get job = 0 s
[2026-03-01 19:35:42] 2026-03-01 18:35:08,540 | INFO     | . initial setup = 4 s
[2026-03-01 19:35:42] 2026-03-01 18:35:08,540 | INFO     | . payload setup = 5 s
[2026-03-01 19:35:42] 2026-03-01 18:35:08,540 | INFO     | . stage-in = 0 s
[2026-03-01 19:35:42] 2026-03-01 18:35:08,540 | INFO     | . payload execution = 3743 s
[2026-03-01 19:35:42] 2026-03-01 18:35:08,540 | INFO     | . stage-out = 0 s
[2026-03-01 19:35:42] 2026-03-01 18:35:08,540 | INFO     | . log creation = 0 s
[2026-03-01 19:35:42] 2026-03-01 18:35:08,540 | INFO     | ..............................
[2026-03-01 19:35:42] 2026-03-01 18:35:08,865 | INFO     | 
[2026-03-01 19:35:42] 2026-03-01 18:35:08,865 | INFO     | job summary report
[2026-03-01 19:35:42] 2026-03-01 18:35:08,865 | INFO     | --------------------------------------------------
[2026-03-01 19:35:42] 2026-03-01 18:35:08,865 | INFO     | PanDA job id: 7034854587
[2026-03-01 19:35:42] 2026-03-01 18:35:08,865 | INFO     | task id: 48700922
[2026-03-01 19:35:42] 2026-03-01 18:35:08,865 | INFO     | errors: (none)
[2026-03-01 19:35:42] 2026-03-01 18:35:08,865 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-01 19:35:42] 2026-03-01 18:35:08,865 | INFO     | pilot state: finished 
[2026-03-01 19:35:42] 2026-03-01 18:35:08,865 | INFO     | transexitcode: 0
[2026-03-01 19:35:42] 2026-03-01 18:35:08,865 | INFO     | exeerrorcode: 0
[2026-03-01 19:35:42] 2026-03-01 18:35:08,865 | INFO     | exeerrordiag: 
[2026-03-01 19:35:42] 2026-03-01 18:35:08,865 | INFO     | exitcode: 0
[2026-03-01 19:35:42] 2026-03-01 18:35:08,865 | INFO     | exitmsg: OK
[2026-03-01 19:35:42] 2026-03-01 18:35:08,866 | INFO     | cpuconsumptiontime: 14158 s
[2026-03-01 19:35:42] 2026-03-01 18:35:08,866 | INFO     | nevents: 400
[2026-03-01 19:35:42] 2026-03-01 18:35:08,866 | INFO     | neventsw: 0
[2026-03-01 19:35:42] 2026-03-01 18:35:08,866 | INFO     | pid: 3106716
[2026-03-01 19:35:42] 2026-03-01 18:35:08,866 | INFO     | pgrp: 3106716
[2026-03-01 19:35:42] 2026-03-01 18:35:08,866 | INFO     | corecount: 4
[2026-03-01 19:35:42] 2026-03-01 18:35:08,866 | INFO     | event service: False
[2026-03-01 19:35:42] 2026-03-01 18:35:08,866 | INFO     | sizes: {0: 2282220, 11: 2282220, 3752: 2317043, 3753: 2317043, 3755: 2317237}
[2026-03-01 19:35:42] 2026-03-01 18:35:08,866 | INFO     | --------------------------------------------------
[2026-03-01 19:35:42] 2026-03-01 18:35:08,866 | INFO     | 
[2026-03-01 19:35:42] 2026-03-01 18:35:08,866 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot68/slots/0
[2026-03-01 19:35:42] 2026-03-01 18:35:08,895 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-01 19:35:42] 2026-03-01 18:35:08,895 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-01 19:35:42] 2026-03-01 18:35:08,895 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-01 19:35:42] 2026-03-01 18:35:08,895 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-01 19:35:42] 2026-03-01 18:35:08,895 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-01 19:35:42] 2026-03-01 18:35:08,895 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-01 19:35:42] 2026-03-01 18:35:08,895 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-01 19:35:42] 2026-03-01 18:35:08,895 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-01 19:35:42] 2026-03-01 18:35:08,895 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-01 19:35:42] 2026-03-01 18:35:08,895 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-01 19:35:42] 2026-03-01 18:35:08,895 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-01 19:35:42] 2026-03-01 18:35:08,895 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-01 19:35:42] 2026-03-01 18:35:08,895 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-01 19:35:42] 2026-03-01 18:35:08,895 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-01 19:35:42] 2026-03-01 18:35:08,895 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-01 19:35:42] 2026-03-01 18:35:08,895 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-01 19:35:42] 2026-03-01 18:35:08,895 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-01 19:35:42] 2026-03-01 18:35:08,895 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-01 19:35:42] 2026-03-01 18:35:08,895 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-01 19:35:42] 2026-03-01 18:35:08,896 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-01 19:35:42] 2026-03-01 18:35:08,896 | INFO     | job 7034854587 has completed (purged errors)
[2026-03-01 19:35:42] 2026-03-01 18:35:08,896 | INFO     | overall cleanup function is called
[2026-03-01 19:35:42] 2026-03-01 18:35:09,902 | INFO     | --- collectZombieJob: --- 10, [3106716]
[2026-03-01 19:35:42] 2026-03-01 18:35:09,902 | INFO     | zombie collector waiting for pid 3106716
[2026-03-01 19:35:42] 2026-03-01 18:35:09,902 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-01 19:35:42] 2026-03-01 18:35:09,902 | INFO     | collected zombie processes
[2026-03-01 19:35:42] 2026-03-01 18:35:09,902 | INFO     | will attempt to kill all subprocesses of pid=3106716
[2026-03-01 19:35:42] 2026-03-01 18:35:10,408 | INFO     | process IDs to be killed: [3106716] (in reverse order)
[2026-03-01 19:35:42] 2026-03-01 18:35:10,656 | WARNING  | found no corresponding commands to process id(s)
[2026-03-01 19:35:42] 2026-03-01 18:35:10,657 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-01 19:35:42] 2026-03-01 18:35:10,688 | INFO     | did not find any defunct processes belonging to 3106716
[2026-03-01 19:35:42] 2026-03-01 18:35:10,719 | INFO     | did not find any defunct processes belonging to 3106716
[2026-03-01 19:35:42] 2026-03-01 18:35:10,719 | INFO     | ready for new job
[2026-03-01 19:35:42] 2026-03-01 18:35:10,719 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-01 19:35:42] 2026-03-01 18:35:10,721 | INFO     | **************************************
[2026-03-01 19:35:42] 2026-03-01 18:35:10,721 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-01 19:35:42] 2026-03-01 18:35:10,721 | INFO     | **************************************
[2026-03-01 19:35:42] 2026-03-01 18:35:10,721 | INFO     | 
[2026-03-01 19:35:42] 2026-03-01 18:35:10,728 | INFO     | architecture information:
[2026-03-01 19:35:42] 2026-03-01 18:35:10,728 | INFO     | executing command: cat /etc/os-release
[2026-03-01 19:35:42] 2026-03-01 18:35:10,743 | INFO     | cat /etc/os-release:
[2026-03-01 19:35:42] NAME="CentOS Linux"
[2026-03-01 19:35:42] VERSION="7 (Core)"
[2026-03-01 19:35:42] ID="centos"
[2026-03-01 19:35:42] ID_LIKE="rhel fedora"
[2026-03-01 19:35:42] VERSION_ID="7"
[2026-03-01 19:35:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-01 19:35:42] ANSI_COLOR="0;31"
[2026-03-01 19:35:42] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-01 19:35:42] HOME_URL="https://www.centos.org/"
[2026-03-01 19:35:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-01 19:35:42] 
[2026-03-01 19:35:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-01 19:35:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-01 19:35:42] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-01 19:35:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-01 19:35:42] 
[2026-03-01 19:35:42] 2026-03-01 18:35:10,743 | INFO     | **************************************
[2026-03-01 19:35:42] 2026-03-01 18:35:11,246 | INFO     | executing command: df -mP /var/lib/boinc/var/slot68/slots/0
[2026-03-01 19:35:42] 2026-03-01 18:35:11,261 | INFO     | sufficient remaining disk space (21279801344 B)
[2026-03-01 19:35:42] 2026-03-01 18:35:11,262 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-01 19:35:42] 2026-03-01 18:35:11,262 | INFO     | current server update state: UPDATING_FINAL
[2026-03-01 19:35:42] 2026-03-01 18:35:11,262 | INFO     | update_server=False
[2026-03-01 19:35:42] 2026-03-01 18:35:11,262 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-01 19:35:42] 2026-03-01 18:35:11,262 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-01 19:35:42] 2026-03-01 18:35:11,436 | INFO     | all job control threads have been joined
[2026-03-01 19:35:42] 2026-03-01 18:35:11,669 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-01 19:35:42] 2026-03-01 18:35:11,669 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-01 19:35:42] 2026-03-01 18:35:11,669 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-01 19:35:42] 2026-03-01 18:35:11,669 | INFO     | will abort loop
[2026-03-01 19:35:42] 2026-03-01 18:35:11,937 | INFO     | all data control threads have been joined
[2026-03-01 19:35:42] 2026-03-01 18:35:12,008 | INFO     | all payload control threads have been joined
[2026-03-01 19:35:42] 2026-03-01 18:35:12,267 | INFO     | [job] retrieve thread has finished
[2026-03-01 19:35:42] 2026-03-01 18:35:12,441 | INFO     | [job] control thread has finished
[2026-03-01 19:35:42] 2026-03-01 18:35:12,523 | INFO     | [job] validate thread has finished
[2026-03-01 19:35:42] 2026-03-01 18:35:12,537 | INFO     | [payload] validate_post thread has finished
[2026-03-01 19:35:42] 2026-03-01 18:35:12,674 | INFO     | [job] job monitor thread has finished
[2026-03-01 19:35:42] 2026-03-01 18:35:12,754 | INFO     | [job] create_data_payload thread has finished
[2026-03-01 19:35:42] 2026-03-01 18:35:12,783 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-01 19:35:42] 2026-03-01 18:35:12,942 | INFO     | [data] control thread has finished
[2026-03-01 19:35:42] 2026-03-01 18:35:13,013 | INFO     | [payload] control thread has finished
[2026-03-01 19:35:42] 2026-03-01 18:35:13,074 | INFO     | [payload] validate_pre thread has finished
[2026-03-01 19:35:42] 2026-03-01 18:35:13,251 | INFO     | [data] copytool_in thread has finished
[2026-03-01 19:35:42] 2026-03-01 18:35:13,268 | INFO     | [data] copytool_out thread has finished
[2026-03-01 19:35:42] 2026-03-01 18:35:13,312 | INFO     | [payload] failed_post thread has finished
[2026-03-01 19:35:42] 2026-03-01 18:35:13,596 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-01 19:35:42] 2026-03-01 18:35:13,628 | INFO     | [payload] execute_payloads thread has finished
[2026-03-01 19:35:42] 2026-03-01 18:35:14,601 | INFO     | [job] queue monitor thread has finished
[2026-03-01 19:35:42] 2026-03-01 18:35:16,790 | INFO     | [data] queue_monitor thread has finished
[2026-03-01 19:35:42] 2026-03-01 18:35:22,049 | INFO     | job.realtimelogging is not enabled
[2026-03-01 19:35:42] 2026-03-01 18:35:23,054 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-01 19:35:42] 2026-03-01 18:35:27,845 | INFO     | [monitor] cgroup control has ended
[2026-03-01 19:35:42] 2026-03-01 18:35:29,626 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23037457659712)>', '<ExcThread(monitor, started 23037222340352)>']
[2026-03-01 19:35:42] 2026-03-01 18:35:34,651 | INFO     | all workflow threads have been joined
[2026-03-01 19:35:42] 2026-03-01 18:35:34,651 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-01 19:35:42] 2026-03-01 18:35:34,651 | INFO     | traces error code: 0
[2026-03-01 19:35:42] 2026-03-01 18:35:34,651 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-01 19:35:42] 2026-03-01 18:35:41,858 | INFO     | PID=3092129 has CPU usage=3.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-01 19:35:42] 2026-03-01 18:35:41,858 | INFO     | .. there are 50 such processes running
[2026-03-01 19:35:42] 2026-03-01 18:35:41,859 | INFO     | found 0 job(s) in 20 queues
[2026-03-01 19:35:42] 2026-03-01 18:35:41,859 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-01 19:35:42] 2026-03-01 18:35:41,859 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-01 19:35:42] 2026-03-01 18:35:41,859 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-01 19:35:42] 2026-03-01 18:35:41,860 | CRITICAL | thread 'MainThread' is not alive
[2026-03-01 19:35:42] 2026-03-01 18:35:41,860 | INFO     | [monitor] control thread has ended
[2026-03-01 19:35:42] 2026-03-01 18:35:42,062 [wrapper] ==== pilot stdout END ====
[2026-03-01 19:35:42] 2026-03-01 18:35:42,064 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-01 19:35:42] 2026-03-01 18:35:42,066 [wrapper] pilotpid: 3092129
[2026-03-01 19:35:42] 2026-03-01 18:35:42,068 [wrapper] Pilot exit status: 0
[2026-03-01 19:35:42] 2026-03-01 18:35:42,076 [wrapper] pandaids: 7034854587
[2026-03-01 19:35:42] 2026-03-01 18:35:42,201 [wrapper] cleanup supervisor_pilot 3615514 3092130
[2026-03-01 19:35:42] 2026-03-01 18:35:42,203 [wrapper] Test setup, not cleaning
[2026-03-01 19:35:42] 2026-03-01 18:35:42,206 [wrapper] apfmon messages muted
[2026-03-01 19:35:42] 2026-03-01 18:35:42,208 [wrapper] ==== wrapper stdout END ====
[2026-03-01 19:35:42] 2026-03-01 18:35:42,210 [wrapper] ==== wrapper stderr END ====
[2026-03-01 19:35:42]  *** Error codes and diagnostics ***
[2026-03-01 19:35:42]     "exeErrorCode": 0,
[2026-03-01 19:35:42]     "exeErrorDiag": "",
[2026-03-01 19:35:42]     "pilotErrorCode": 0,
[2026-03-01 19:35:42]     "pilotErrorDiag": "",
[2026-03-01 19:35:42]  *** Listing of results directory ***
[2026-03-01 19:35:42] total 324896
[2026-03-01 19:35:42] -rw-r--r--. 1 boinc boinc    584627 Mar  1 11:14 pilot3.tar.gz
[2026-03-01 19:35:42] -rwx------. 1 boinc boinc     36322 Mar  1 11:14 runpilot2-wrapper.sh
[2026-03-01 19:35:42] -rw-r--r--. 1 boinc boinc      5111 Mar  1 11:15 queuedata.json
[2026-03-01 19:35:42] -rw-r--r--. 1 boinc boinc       100 Mar  1 18:32 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-01 19:35:42] -rwxr-xr-x. 1 boinc boinc      7986 Mar  1 18:32 run_atlas
[2026-03-01 19:35:42] -rw-r--r--. 1 boinc boinc       105 Mar  1 18:32 job.xml
[2026-03-01 19:35:42] -rw-r--r--. 1 boinc boinc      6701 Mar  1 18:32 init_data.xml
[2026-03-01 19:35:42] -rw-r--r--. 2 boinc boinc 189109731 Mar  1 18:32 EVNT.48700920._000095.pool.root.1
[2026-03-01 19:35:42] -rw-r--r--. 2 boinc boinc     15845 Mar  1 18:32 start_atlas.sh
[2026-03-01 19:35:42] drwxrwx--x. 2 boinc boinc      4096 Mar  1 18:32 shared
[2026-03-01 19:35:42] -rw-r--r--. 2 boinc boinc    597924 Mar  1 18:32 input.tar.gz
[2026-03-01 19:35:42] -rw-r--r--. 1 boinc boinc         0 Mar  1 18:32 boinc_lockfile
[2026-03-01 19:35:42] -rw-r--r--. 1 boinc boinc      2515 Mar  1 18:32 pandaJob.out
[2026-03-01 19:35:42] -rw-------. 1 boinc boinc    998184 Mar  1 18:32 agis_schedconf.cvmfs.json
[2026-03-01 19:35:42] -rw-------. 1 boinc boinc   1513015 Mar  1 18:32 agis_ddmendpoints.agis.ALL.json
[2026-03-01 19:35:42] -rw-------. 1 boinc boinc       444 Mar  1 18:32 workernode_map.json
[2026-03-01 19:35:42] drwx------. 5 boinc boinc      4096 Mar  1 18:32 pilot3
[2026-03-01 19:35:42] -rw-------. 1 boinc boinc 138051707 Mar  1 19:34 HITS.48700922._002375.pool.root.1
[2026-03-01 19:35:42] -rw-r--r--. 1 boinc boinc       529 Mar  1 19:34 boinc_task_state.xml
[2026-03-01 19:35:42] -rw-------. 1 boinc boinc      1055 Mar  1 19:35 memory_monitor_summary.json
[2026-03-01 19:35:42] -rw-------. 1 boinc boinc    240265 Mar  1 19:35 log.48700922._002375.job.log.tgz.1
[2026-03-01 19:35:42] -rw-------. 1 boinc boinc      6340 Mar  1 19:35 heartbeat.json
[2026-03-01 19:35:42] -rw-r--r--. 1 boinc boinc        27 Mar  1 19:35 wrapper_checkpoint.txt
[2026-03-01 19:35:42] -rw-------. 1 boinc boinc       893 Mar  1 19:35 pilotlog.txt
[2026-03-01 19:35:42] -rw-------. 1 boinc boinc        95 Mar  1 19:35 pilot_heartbeat.json
[2026-03-01 19:35:42] -rw-------. 1 boinc boinc    565060 Mar  1 19:35 log.48700922._002375.job.log.1
[2026-03-01 19:35:42] -rw-------. 1 boinc boinc       357 Mar  1 19:35 output.list
[2026-03-01 19:35:42] -rw-r--r--. 1 boinc boinc       620 Mar  1 19:35 runtime_log
[2026-03-01 19:35:42] -rw-------. 1 boinc boinc    819200 Mar  1 19:35 result.tar.gz
[2026-03-01 19:35:42] -rw-r--r--. 1 boinc boinc      8192 Mar  1 19:35 boinc_mmap_file
[2026-03-01 19:35:42] -rw-r--r--. 1 boinc boinc      9204 Mar  1 19:35 runtime_log.err
[2026-03-01 19:35:42] -rw-------. 1 boinc boinc       661 Mar  1 19:35 ezOLDmszsG9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmYd9KDmi53Ikm.diag
[2026-03-01 19:35:42] -rw-r--r--. 1 boinc boinc     21659 Mar  1 19:35 stderr.txt
[2026-03-01 19:35:42] HITS file was successfully produced:
[2026-03-01 19:35:42] -rw-------. 1 boinc boinc 138051707 Mar  1 19:34 shared/HITS.pool.root.1
[2026-03-01 19:35:42]  *** Contents of shared directory: ***
[2026-03-01 19:35:42] total 320908
[2026-03-01 19:35:42] -rw-r--r--. 2 boinc boinc 189109731 Mar  1 18:32 ATLAS.root_0
[2026-03-01 19:35:42] -rw-r--r--. 2 boinc boinc     15845 Mar  1 18:32 start_atlas.sh
[2026-03-01 19:35:42] -rw-r--r--. 2 boinc boinc    597924 Mar  1 18:32 input.tar.gz
[2026-03-01 19:35:42] -rw-------. 1 boinc boinc 138051707 Mar  1 19:34 HITS.pool.root.1
[2026-03-01 19:35:42] -rw-------. 1 boinc boinc    819200 Mar  1 19:35 result.tar.gz
19:35:43 (3085503): run_atlas exited; CPU time 14324.267532
19:35:43 (3085503): called boinc_finish(0)

</stderr_txt>
]]>

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