Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
06:48:22 (3107): wrapper (7.7.26015): starting
06:48:22 (3107): wrapper: running run_atlas (--nthreads 8)
[2026-03-01 06:48:22] Arguments: --nthreads 8
[2026-03-01 06:48:22] Threads: 8
[2026-03-01 06:48:22] Checking for CVMFS
[2026-03-01 06:48:22] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-01 06:48:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-01 06:48:22] Running cvmfs_config stat atlas.cern.ch
[2026-03-01 06:48:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-01 06:48:23] 2.11.2.0 6077 23923 71444 156768 3 51 16678082 20275201 1 130560 0 4945448 99.960 1226476 29620 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-03-01 06:48:23] CVMFS is ok
[2026-03-01 06:48:23] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-01 06:48:23] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-01 06:48:23] Further information can be found at the LHC@home message board.
[2026-03-01 06:48:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-01 06:48:23] Checking for apptainer binary...
[2026-03-01 06:48:23] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-01 06:48:23] Running /usr/bin/apptainer --version
[2026-03-01 06:48:23] apptainer version 1.3.2-1.el7
[2026-03-01 06:48:23] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-01 06:48:24] c-204-34.aglt2.org
[2026-03-01 06:48:24] apptainer works
[2026-03-01 06:48:24] Set ATHENA_PROC_NUMBER=8
[2026-03-01 06:48:24] Set ATHENA_CORE_NUMBER=8
[2026-03-01 06:48:24] Starting ATLAS job with PandaID=7034617621
[2026-03-01 06:48:24] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-01 10:04:12]  *** The last 200 lines of the pilot log: ***
[2026-03-01 10:04:12] 2026-03-01 15:03:52,875 | INFO     | job 7034617621 has finished - writing final server update
[2026-03-01 10:04:12] 2026-03-01 15:03:52,875 | INFO     | total number of processed events: 400 (read)
[2026-03-01 10:04:12] 2026-03-01 15:03:52,877 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7034617621/memory_monitor_summary.json (trf name=prmon)
[2026-03-01 10:04:12] 2026-03-01 15:03:52,878 | INFO     | extracted standard info from prmon json
[2026-03-01 10:04:12] 2026-03-01 15:03:52,878 | INFO     | extracted standard memory fields from prmon json
[2026-03-01 10:04:12] 2026-03-01 15:03:52,878 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-01 10:04:12] 2026-03-01 15:03:52,878 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-01 10:04:12] 2026-03-01 15:03:52,879 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-01 10:04:12] 2026-03-01 15:03:52,882 | INFO     | fitting pss+swap vs Time
[2026-03-01 10:04:12] 2026-03-01 15:03:52,883 | INFO     | sum of square deviations: 2194675568.0
[2026-03-01 10:04:12] 2026-03-01 15:03:52,884 | INFO     | sum of deviations: 12865615347.0
[2026-03-01 10:04:12] 2026-03-01 15:03:52,884 | INFO     | mean x: 1772371579.5
[2026-03-01 10:04:12] 2026-03-01 15:03:52,884 | INFO     | mean y: 2514398.09375
[2026-03-01 10:04:12] 2026-03-01 15:03:52,884 | INFO     | intersect: -10387472771.892292
[2026-03-01 10:04:12] 2026-03-01 15:03:52,884 | INFO     | chi2: 2.192135349387746
[2026-03-01 10:04:12] 2026-03-01 15:03:52,885 | INFO     | sum of square deviations: 2027639878.0
[2026-03-01 10:04:12] 2026-03-01 15:03:52,886 | INFO     | sum of deviations: 25233217544.0
[2026-03-01 10:04:12] 2026-03-01 15:03:52,886 | INFO     | mean x: 1772371427.0
[2026-03-01 10:04:12] 2026-03-01 15:03:52,886 | INFO     | mean y: 2525441.3636363638
[2026-03-01 10:04:12] 2026-03-01 15:03:52,886 | INFO     | intersect: -22053972002.53834
[2026-03-01 10:04:12] 2026-03-01 15:03:52,887 | INFO     | chi2: 1.4240302615803044
[2026-03-01 10:04:12] 2026-03-01 15:03:52,887 | INFO     | current chi2=1.4240302615803044 (change=35.039126941772544 %)
[2026-03-01 10:04:12] 2026-03-01 15:03:52,887 | INFO     | sum of square deviations: 1869302025.5
[2026-03-01 10:04:12] 2026-03-01 15:03:52,888 | INFO     | sum of deviations: 24498042371.999996
[2026-03-01 10:04:12] 2026-03-01 15:03:52,888 | INFO     | mean x: 1772371274.5
[2026-03-01 10:04:12] 2026-03-01 15:03:52,888 | INFO     | mean y: 2524733.131868132
[2026-03-01 10:04:12] 2026-03-01 15:03:52,888 | INFO     | intersect: -23225196624.52449
[2026-03-01 10:04:12] 2026-03-01 15:03:52,889 | INFO     | chi2: 1.4250305329407367
[2026-03-01 10:04:12] 2026-03-01 15:03:52,889 | INFO     | current chi2=1.4250305329407367 (change=-0.07024228258479526 %)
[2026-03-01 10:04:12] 2026-03-01 15:03:52,889 | INFO     | right removable region: 181
[2026-03-01 10:04:12] 2026-03-01 15:03:52,889 | INFO     | sum of square deviations: 2027639878.0
[2026-03-01 10:04:12] 2026-03-01 15:03:52,890 | INFO     | sum of deviations: -15074392102.0
[2026-03-01 10:04:12] 2026-03-01 15:03:52,890 | INFO     | mean x: 1772371732.0
[2026-03-01 10:04:12] 2026-03-01 15:03:52,891 | INFO     | mean y: 2539589.1818181816
[2026-03-01 10:04:12] 2026-03-01 15:03:52,891 | INFO     | intersect: 13179152817.47465
[2026-03-01 10:04:12] 2026-03-01 15:03:52,891 | INFO     | chi2: 0.8457571703126352
[2026-03-01 10:04:12] 2026-03-01 15:03:52,891 | INFO     | current chi2=0.8457571703126352 (change=61.41856977267158 %)
[2026-03-01 10:04:12] 2026-03-01 15:03:52,891 | INFO     | sum of square deviations: 1869302025.5
[2026-03-01 10:04:12] 2026-03-01 15:03:52,893 | INFO     | sum of deviations: -15022175034.5
[2026-03-01 10:04:12] 2026-03-01 15:03:52,893 | INFO     | mean x: 1772371884.5
[2026-03-01 10:04:12] 2026-03-01 15:03:52,893 | INFO     | mean y: 2539484.7967032967
[2026-03-01 10:04:12] 2026-03-01 15:03:52,893 | INFO     | intersect: 14245759848.324638
[2026-03-01 10:04:12] 2026-03-01 15:03:52,893 | INFO     | chi2: 0.8292921349501279
[2026-03-01 10:04:12] 2026-03-01 15:03:52,893 | INFO     | current chi2=0.8292921349501279 (change=1.946780463761365 %)
[2026-03-01 10:04:12] 2026-03-01 15:03:52,893 | INFO     | left removable region: 20
[2026-03-01 10:04:12] 2026-03-01 15:03:52,894 | INFO     | sum of square deviations: 1294014960.0
[2026-03-01 10:04:12] 2026-03-01 15:03:52,895 | INFO     | sum of deviations: 2468231898.000001
[2026-03-01 10:04:12] 2026-03-01 15:03:52,895 | INFO     | mean x: 1772371854.0
[2026-03-01 10:04:12] 2026-03-01 15:03:52,895 | INFO     | mean y: 2546108.2298136647
[2026-03-01 10:04:12] 2026-03-01 15:03:52,895 | INFO     | intersect: -3378113992.6087427
[2026-03-01 10:04:12] 2026-03-01 15:03:52,895 | INFO     | chi2: 0.00017548541372446576
[2026-03-01 10:04:12] 2026-03-01 15:03:52,895 | INFO     | current memory leak: 1.91 B/s (using 161 data points, chi2=0.00)
[2026-03-01 10:04:12] 2026-03-01 15:03:52,896 | INFO     | could have reported an average CPU frequency of 1779 MHz (10 samples)
[2026-03-01 10:04:12] 2026-03-01 15:03:52,896 | INFO     | ..............................
[2026-03-01 10:04:12] 2026-03-01 15:03:52,896 | INFO     | . Timing measurements:
[2026-03-01 10:04:12] 2026-03-01 15:03:52,896 | INFO     | . get job = 0 s
[2026-03-01 10:04:12] 2026-03-01 15:03:52,896 | INFO     | . initial setup = 8 s
[2026-03-01 10:04:12] 2026-03-01 15:03:52,897 | INFO     | . payload setup = 8 s
[2026-03-01 10:04:12] 2026-03-01 15:03:52,897 | INFO     | . stage-in = 0 s
[2026-03-01 10:04:12] 2026-03-01 15:03:52,897 | INFO     | . payload execution = 11673 s
[2026-03-01 10:04:12] 2026-03-01 15:03:52,897 | INFO     | . stage-out = 2 s
[2026-03-01 10:04:12] 2026-03-01 15:03:52,897 | INFO     | . log creation = 0 s
[2026-03-01 10:04:12] 2026-03-01 15:03:52,897 | INFO     | ..............................
[2026-03-01 10:04:12] 2026-03-01 15:03:52,980 | INFO     | 
[2026-03-01 10:04:12] 2026-03-01 15:03:52,980 | INFO     | job summary report
[2026-03-01 10:04:12] 2026-03-01 15:03:52,981 | INFO     | --------------------------------------------------
[2026-03-01 10:04:12] 2026-03-01 15:03:52,981 | INFO     | PanDA job id: 7034617621
[2026-03-01 10:04:12] 2026-03-01 15:03:52,981 | INFO     | task id: 48842610
[2026-03-01 10:04:12] 2026-03-01 15:03:52,981 | INFO     | errors: (none)
[2026-03-01 10:04:12] 2026-03-01 15:03:52,981 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-01 10:04:12] 2026-03-01 15:03:52,982 | INFO     | pilot state: finished 
[2026-03-01 10:04:12] 2026-03-01 15:03:52,982 | INFO     | transexitcode: 0
[2026-03-01 10:04:12] 2026-03-01 15:03:52,982 | INFO     | exeerrorcode: 0
[2026-03-01 10:04:12] 2026-03-01 15:03:52,982 | INFO     | exeerrordiag: 
[2026-03-01 10:04:12] 2026-03-01 15:03:52,982 | INFO     | exitcode: 0
[2026-03-01 10:04:12] 2026-03-01 15:03:52,982 | INFO     | exitmsg: OK
[2026-03-01 10:04:12] 2026-03-01 15:03:52,982 | INFO     | cpuconsumptiontime: 88231 s
[2026-03-01 10:04:12] 2026-03-01 15:03:52,983 | INFO     | nevents: 400
[2026-03-01 10:04:12] 2026-03-01 15:03:52,983 | INFO     | neventsw: 0
[2026-03-01 10:04:12] 2026-03-01 15:03:52,983 | INFO     | pid: 11679
[2026-03-01 10:04:12] 2026-03-01 15:03:52,983 | INFO     | pgrp: 11679
[2026-03-01 10:04:12] 2026-03-01 15:03:52,983 | INFO     | corecount: 8
[2026-03-01 10:04:12] 2026-03-01 15:03:52,983 | INFO     | event service: False
[2026-03-01 10:04:12] 2026-03-01 15:03:52,983 | INFO     | sizes: {0: 2281866, 1: 2282327, 11: 2282327, 11685: 2311738, 11689: 2320736, 11692: 2320792, 11693: 2321114}
[2026-03-01 10:04:12] 2026-03-01 15:03:52,983 | INFO     | --------------------------------------------------
[2026-03-01 10:04:12] 2026-03-01 15:03:52,983 | INFO     | 
[2026-03-01 10:04:12] 2026-03-01 15:03:52,984 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-03-01 10:04:12] 2026-03-01 15:03:52,997 | INFO     | time since job start (11704s) is within the limit (349056.0s)
[2026-03-01 10:04:12] 2026-03-01 15:03:53,019 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-01 10:04:12] 2026-03-01 15:03:53,019 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-01 10:04:12] 2026-03-01 15:03:53,019 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-01 10:04:12] 2026-03-01 15:03:53,019 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-01 10:04:12] 2026-03-01 15:03:53,019 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-01 10:04:12] 2026-03-01 15:03:53,019 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-01 10:04:12] 2026-03-01 15:03:53,020 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-01 10:04:12] 2026-03-01 15:03:53,020 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-01 10:04:12] 2026-03-01 15:03:53,020 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-01 10:04:12] 2026-03-01 15:03:53,020 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-01 10:04:12] 2026-03-01 15:03:53,020 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-01 10:04:12] 2026-03-01 15:03:53,021 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-01 10:04:12] 2026-03-01 15:03:53,021 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-01 10:04:12] 2026-03-01 15:03:53,021 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-01 10:04:12] 2026-03-01 15:03:53,021 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-01 10:04:12] 2026-03-01 15:03:53,021 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-01 10:04:12] 2026-03-01 15:03:53,021 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-01 10:04:12] 2026-03-01 15:03:53,022 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-01 10:04:12] 2026-03-01 15:03:53,022 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-01 10:04:12] 2026-03-01 15:03:53,022 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-01 10:04:12] 2026-03-01 15:03:53,022 | INFO     | job 7034617621 has completed (purged errors)
[2026-03-01 10:04:12] 2026-03-01 15:03:53,023 | INFO     | overall cleanup function is called
[2026-03-01 10:04:12] 2026-03-01 15:03:54,031 | INFO     | --- collectZombieJob: --- 10, [11679]
[2026-03-01 10:04:12] 2026-03-01 15:03:54,031 | INFO     | zombie collector waiting for pid 11679
[2026-03-01 10:04:12] 2026-03-01 15:03:54,031 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-01 10:04:12] 2026-03-01 15:03:54,031 | INFO     | collected zombie processes
[2026-03-01 10:04:12] 2026-03-01 15:03:54,032 | INFO     | will attempt to kill all subprocesses of pid=11679
[2026-03-01 10:04:12] 2026-03-01 15:03:54,115 | INFO     | process IDs to be killed: [11679] (in reverse order)
[2026-03-01 10:04:12] 2026-03-01 15:03:54,175 | WARNING  | found no corresponding commands to process id(s)
[2026-03-01 10:04:12] 2026-03-01 15:03:54,175 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-01 10:04:12] 2026-03-01 15:03:54,179 | INFO     | did not find any defunct processes belonging to 11679
[2026-03-01 10:04:12] 2026-03-01 15:03:54,183 | INFO     | did not find any defunct processes belonging to 11679
[2026-03-01 10:04:12] 2026-03-01 15:03:54,183 | INFO     | ready for new job
[2026-03-01 10:04:12] 2026-03-01 15:03:54,183 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-01 10:04:12] 2026-03-01 15:03:54,185 | INFO     | **************************************
[2026-03-01 10:04:12] 2026-03-01 15:03:54,185 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-01 10:04:12] 2026-03-01 15:03:54,185 | INFO     | **************************************
[2026-03-01 10:04:12] 2026-03-01 15:03:54,185 | INFO     | 
[2026-03-01 10:04:12] 2026-03-01 15:03:54,186 | INFO     | architecture information:
[2026-03-01 10:04:12] 2026-03-01 15:03:54,186 | INFO     | executing command: cat /etc/os-release
[2026-03-01 10:04:12] 2026-03-01 15:03:54,204 | INFO     | cat /etc/os-release:
[2026-03-01 10:04:12] NAME="CentOS Linux"
[2026-03-01 10:04:12] VERSION="7 (Core)"
[2026-03-01 10:04:12] ID="centos"
[2026-03-01 10:04:12] ID_LIKE="rhel fedora"
[2026-03-01 10:04:12] VERSION_ID="7"
[2026-03-01 10:04:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-01 10:04:12] ANSI_COLOR="0;31"
[2026-03-01 10:04:12] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-01 10:04:12] HOME_URL="https://www.centos.org/"
[2026-03-01 10:04:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-01 10:04:12] 
[2026-03-01 10:04:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-01 10:04:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-01 10:04:12] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-01 10:04:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-01 10:04:12] 
[2026-03-01 10:04:12] 2026-03-01 15:03:54,204 | INFO     | **************************************
[2026-03-01 10:04:12] 2026-03-01 15:03:54,707 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-03-01 10:04:12] 2026-03-01 15:03:54,727 | INFO     | sufficient remaining disk space (18335399936 B)
[2026-03-01 10:04:12] 2026-03-01 15:03:54,727 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-01 10:04:12] 2026-03-01 15:03:54,727 | INFO     | current server update state: UPDATING_FINAL
[2026-03-01 10:04:12] 2026-03-01 15:03:54,728 | INFO     | update_server=False
[2026-03-01 10:04:12] 2026-03-01 15:03:54,728 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-01 10:04:12] 2026-03-01 15:03:54,728 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-01 10:04:12] 2026-03-01 15:03:54,729 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-03-01 10:04:12] 2026-03-01 15:03:54,729 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-01 10:04:12] 2026-03-01 15:03:54,730 | INFO     | found 0 job(s) in 20 queues
[2026-03-01 10:04:12] 2026-03-01 15:03:54,730 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-01 10:04:12] 2026-03-01 15:03:54,730 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-01 10:04:12] 2026-03-01 15:03:54,845 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-01 10:04:12] 2026-03-01 15:03:54,845 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-01 10:04:12] 2026-03-01 15:03:54,856 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-01 10:04:12] 2026-03-01 15:03:54,856 | INFO     | will abort loop
[2026-03-01 10:04:12] 2026-03-01 15:03:55,316 | INFO     | all job control threads have been joined
[2026-03-01 10:04:12] 2026-03-01 15:03:55,693 | INFO     | all data control threads have been joined
[2026-03-01 10:04:12] 2026-03-01 15:03:55,733 | INFO     | [job] retrieve thread has finished
[2026-03-01 10:04:12] 2026-03-01 15:03:55,734 | INFO     | [job] queue monitor thread has finished
[2026-03-01 10:04:12] 2026-03-01 15:03:55,738 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-01 10:04:12] 2026-03-01 15:03:55,811 | INFO     | all payload control threads have been joined
[2026-03-01 10:04:12] 2026-03-01 15:03:55,862 | INFO     | [job] job monitor thread has finished
[2026-03-01 10:04:12] 2026-03-01 15:03:55,869 | INFO     | [payload] validate_post thread has finished
[2026-03-01 10:04:12] 2026-03-01 15:03:56,322 | INFO     | [job] control thread has finished
[2026-03-01 10:04:12] 2026-03-01 15:03:56,655 | INFO     | [payload] execute_payloads thread has finished
[2026-03-01 10:04:12] 2026-03-01 15:03:56,699 | INFO     | [data] control thread has finished
[2026-03-01 10:04:12] 2026-03-01 15:03:56,732 | INFO     | [data] copytool_out thread has finished
[2026-03-01 10:04:12] 2026-03-01 15:03:56,764 | INFO     | [payload] validate_pre thread has finished
[2026-03-01 10:04:12] 2026-03-01 15:03:56,767 | INFO     | [job] create_data_payload thread has finished
[2026-03-01 10:04:12] 2026-03-01 15:03:56,777 | INFO     | [job] validate thread has finished
[2026-03-01 10:04:12] 2026-03-01 15:03:56,816 | INFO     | [payload] control thread has finished
[2026-03-01 10:04:12] 2026-03-01 15:03:56,836 | INFO     | [data] copytool_in thread has finished
[2026-03-01 10:04:12] 2026-03-01 15:03:56,909 | INFO     | [payload] failed_post thread has finished
[2026-03-01 10:04:12] 2026-03-01 15:03:58,204 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-01 10:04:12] 2026-03-01 15:04:02,205 | INFO     | [data] queue_monitor thread has finished
[2026-03-01 10:04:12] 2026-03-01 15:04:07,307 | INFO     | [monitor] cgroup control has ended
[2026-03-01 10:04:12] 2026-03-01 15:04:07,413 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139793242953536)>', '<ExcThread(monitor, started 139792553584384)>']
[2026-03-01 10:04:12] 2026-03-01 15:04:07,794 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-01 10:04:12] 2026-03-01 15:04:07,794 | INFO     | [monitor] control thread has ended
[2026-03-01 10:04:12] 2026-03-01 15:04:12,438 | INFO     | all workflow threads have been joined
[2026-03-01 10:04:12] 2026-03-01 15:04:12,439 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-01 10:04:12] 2026-03-01 15:04:12,439 | INFO     | traces error code: 0
[2026-03-01 10:04:12] 2026-03-01 15:04:12,440 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-01 10:04:12] 2026-03-01 15:04:12,559 [wrapper] ==== pilot stdout END ====
[2026-03-01 10:04:12] 2026-03-01 15:04:12,563 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-01 10:04:12] 2026-03-01 15:04:12,568 [wrapper] pilotpid: 7226
[2026-03-01 10:04:12] 2026-03-01 15:04:12,572 [wrapper] Pilot exit status: 0
[2026-03-01 10:04:12] 2026-03-01 15:04:12,589 [wrapper] pandaids: 7034617621
[2026-03-01 10:04:12] 2026-03-01 15:04:12,633 [wrapper] cleanup supervisor_pilot  1196 7227
[2026-03-01 10:04:12] 2026-03-01 15:04:12,637 [wrapper] Test setup, not cleaning
[2026-03-01 10:04:12] 2026-03-01 15:04:12,642 [wrapper] apfmon messages muted
[2026-03-01 10:04:12] 2026-03-01 15:04:12,647 [wrapper] ==== wrapper stdout END ====
[2026-03-01 10:04:12] 2026-03-01 15:04:12,651 [wrapper] ==== wrapper stderr END ====
[2026-03-01 10:04:12]  *** Error codes and diagnostics ***
[2026-03-01 10:04:12]     "exeErrorCode": 0,
[2026-03-01 10:04:12]     "exeErrorDiag": "",
[2026-03-01 10:04:12]     "pilotErrorCode": 0,
[2026-03-01 10:04:12]     "pilotErrorDiag": "",
[2026-03-01 10:04:12]  *** Listing of results directory ***
[2026-03-01 10:04:12] total 532956
[2026-03-01 10:04:12] -rw-r--r-- 1 boincer umatlas    584627 Mar  1 04:10 pilot3.tar.gz
[2026-03-01 10:04:12] -rwx------ 1 boincer umatlas     36322 Mar  1 04:18 runpilot2-wrapper.sh
[2026-03-01 10:04:12] -rw-r--r-- 1 boincer umatlas      5111 Mar  1 04:18 queuedata.json
[2026-03-01 10:04:12] -rw-r--r-- 1 boincer umatlas       100 Mar  1 06:48 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-01 10:04:12] -rwxr-xr-x 1 boincer umatlas      7986 Mar  1 06:48 run_atlas
[2026-03-01 10:04:12] -rw-r--r-- 1 boincer umatlas       105 Mar  1 06:48 job.xml
[2026-03-01 10:04:12] -rw-r--r-- 2 boincer umatlas 289036624 Mar  1 06:48 EVNT.48448779._000002.pool.root.1
[2026-03-01 10:04:12] -rw-r--r-- 2 boincer umatlas     15845 Mar  1 06:48 start_atlas.sh
[2026-03-01 10:04:12] drwxrwx--x 2 boincer umatlas      4096 Mar  1 06:48 shared
[2026-03-01 10:04:12] -rw-r--r-- 2 boincer umatlas    597984 Mar  1 06:48 input.tar.gz
[2026-03-01 10:04:12] -rw-r--r-- 1 boincer umatlas         0 Mar  1 06:48 boinc_lockfile
[2026-03-01 10:04:12] -rw-r--r-- 1 boincer umatlas      2623 Mar  1 06:48 pandaJob.out
[2026-03-01 10:04:12] -rw------- 1 boincer umatlas        57 Mar  1 06:48 setup.sh.local
[2026-03-01 10:04:12] -rw------- 1 boincer umatlas    998184 Mar  1 06:48 agis_schedconf.cvmfs.json
[2026-03-01 10:04:12] -rw------- 1 boincer umatlas       431 Mar  1 06:48 workernode_map.json
[2026-03-01 10:04:12] drwx------ 5 boincer umatlas      4096 Mar  1 06:48 pilot3
[2026-03-01 10:04:12] -rw-r--r-- 1 boincer umatlas      5911 Mar  1 10:00 init_data.xml
[2026-03-01 10:04:12] -rw------- 1 boincer umatlas 248642282 Mar  1 10:03 HITS.48842610._000081.pool.root.1
[2026-03-01 10:04:12] -rw-r--r-- 1 boincer umatlas       530 Mar  1 10:03 boinc_task_state.xml
[2026-03-01 10:04:12] -rw------- 1 boincer umatlas        95 Mar  1 10:03 pilot_heartbeat.json
[2026-03-01 10:04:12] -rw------- 1 boincer umatlas      1050 Mar  1 10:03 memory_monitor_summary.json
[2026-03-01 10:04:12] -rw------- 1 boincer umatlas   1513015 Mar  1 10:03 agis_ddmendpoints.agis.ALL.json
[2026-03-01 10:04:12] -rw------- 1 boincer umatlas    434973 Mar  1 10:03 log.48842610._000081.job.log.tgz.1
[2026-03-01 10:04:12] -rw-r--r-- 1 boincer umatlas      8192 Mar  1 10:03 boinc_mmap_file
[2026-03-01 10:04:12] -rw-r--r-- 1 boincer umatlas        28 Mar  1 10:03 wrapper_checkpoint.txt
[2026-03-01 10:04:12] -rw------- 1 boincer umatlas      6390 Mar  1 10:03 heartbeat.json
[2026-03-01 10:04:12] -rw------- 1 boincer umatlas      4734 Mar  1 10:04 pilotlog.txt
[2026-03-01 10:04:12] -rw------- 1 boincer umatlas   1631312 Mar  1 10:04 log.48842610._000081.job.log.1
[2026-03-01 10:04:12] -rw------- 1 boincer umatlas       357 Mar  1 10:04 output.list
[2026-03-01 10:04:12] -rw-r--r-- 1 boincer umatlas       620 Mar  1 10:04 runtime_log
[2026-03-01 10:04:12] -rw------- 1 boincer umatlas   2088960 Mar  1 10:04 result.tar.gz
[2026-03-01 10:04:12] -rw------- 1 boincer umatlas       662 Mar  1 10:04 vIfKDmd7rG9n9Rq4apOajLDm4fhM0noT9bVooX4SDmRi7KDmwkISJo.diag
[2026-03-01 10:04:12] -rw-r--r-- 1 boincer umatlas      9342 Mar  1 10:04 runtime_log.err
[2026-03-01 10:04:12] -rw-r--r-- 1 boincer umatlas     20967 Mar  1 10:04 stderr.txt
[2026-03-01 10:04:12] HITS file was successfully produced:
[2026-03-01 10:04:12] -rw------- 1 boincer umatlas 248642282 Mar  1 10:03 shared/HITS.pool.root.1
[2026-03-01 10:04:12]  *** Contents of shared directory: ***
[2026-03-01 10:04:12] total 527724
[2026-03-01 10:04:12] -rw-r--r-- 2 boincer umatlas 289036624 Mar  1 06:48 ATLAS.root_0
[2026-03-01 10:04:12] -rw-r--r-- 2 boincer umatlas     15845 Mar  1 06:48 start_atlas.sh
[2026-03-01 10:04:12] -rw-r--r-- 2 boincer umatlas    597984 Mar  1 06:48 input.tar.gz
[2026-03-01 10:04:12] -rw------- 1 boincer umatlas 248642282 Mar  1 10:03 HITS.pool.root.1
[2026-03-01 10:04:12] -rw------- 1 boincer umatlas   2088960 Mar  1 10:04 result.tar.gz
10:04:14 (3107): run_atlas exited; CPU time 88177.966962
10:04:14 (3107): called boinc_finish(0)

</stderr_txt>
]]>

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