Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:39:28 (6495): wrapper (7.7.26015): starting
21:39:28 (6495): wrapper: running run_atlas (--nthreads 8)
[2026-03-01 21:39:28] Arguments: --nthreads 8
[2026-03-01 21:39:28] Threads: 8
[2026-03-01 21:39:28] Checking for CVMFS
[2026-03-01 21:39:29] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-01 21:39:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-01 21:39:30] Running cvmfs_config stat atlas.cern.ch
[2026-03-01 21:39:32] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-01 21:39:32] 2.11.2.0 18097 109346 134440 156782 3 55 21904461 25165824 899 130560 159 36469308 99.764 32881852 1064 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-03-01 21:39:32] CVMFS is ok
[2026-03-01 21:39:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-01 21:39:32] Checking for apptainer binary...
[2026-03-01 21:39:32] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-01 21:39:32] Running /usr/bin/apptainer --version
[2026-03-01 21:39:32] apptainer version 1.3.2-1.el7
[2026-03-01 21:39:32] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-01 21:39:38] cg-vwn387.simple-grid.lan
[2026-03-01 21:39:38] apptainer works
[2026-03-01 21:39:38] Set ATHENA_PROC_NUMBER=8
[2026-03-01 21:39:38] Set ATHENA_CORE_NUMBER=8
[2026-03-01 21:39:38] Starting ATLAS job with PandaID=7034878377
[2026-03-01 21:39:38] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/16 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-02 02:37:59]  *** The last 200 lines of the pilot log: ***
[2026-03-02 02:37:59] 2026-03-02 01:36:46,709 | INFO     | job 7034878377 has finished - writing final server update
[2026-03-02 02:37:59] 2026-03-02 01:36:46,709 | INFO     | total number of processed events: 400 (read)
[2026-03-02 02:37:59] 2026-03-02 01:36:46,711 | INFO     | using path: /var/lib/boinc/slots/16/PanDA_Pilot-7034878377/memory_monitor_summary.json (trf name=prmon)
[2026-03-02 02:37:59] 2026-03-02 01:36:46,712 | INFO     | extracted standard info from prmon json
[2026-03-02 02:37:59] 2026-03-02 01:36:46,712 | INFO     | extracted standard memory fields from prmon json
[2026-03-02 02:37:59] 2026-03-02 01:36:46,712 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-02 02:37:59] 2026-03-02 01:36:46,713 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-02 02:37:59] 2026-03-02 01:36:46,713 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-02 02:37:59] 2026-03-02 01:36:46,719 | INFO     | fitting pss+swap vs Time
[2026-03-02 02:37:59] 2026-03-02 01:36:46,719 | INFO     | sum of square deviations: 6880054580.0
[2026-03-02 02:37:59] 2026-03-02 01:36:46,722 | INFO     | sum of deviations: 169030340041.00003
[2026-03-02 02:37:59] 2026-03-02 01:36:46,723 | INFO     | mean x: 1772406824.0
[2026-03-02 02:37:59] 2026-03-02 01:36:46,723 | INFO     | mean y: 2436928.213523132
[2026-03-02 02:37:59] 2026-03-02 01:36:46,723 | INFO     | intersect: -43542352530.66732
[2026-03-02 02:37:59] 2026-03-02 01:36:46,723 | INFO     | chi2: 8.631184736097055
[2026-03-02 02:37:59] 2026-03-02 01:36:46,724 | INFO     | sum of square deviations: 6519285025.0
[2026-03-02 02:37:59] 2026-03-02 01:36:46,730 | INFO     | sum of deviations: 185255317864.0
[2026-03-02 02:37:59] 2026-03-02 01:36:46,730 | INFO     | mean x: 1772406671.5
[2026-03-02 02:37:59] 2026-03-02 01:36:46,730 | INFO     | mean y: 2443666.8913043477
[2026-03-02 02:37:59] 2026-03-02 01:36:46,730 | INFO     | intersect: -50363165453.41353
[2026-03-02 02:37:59] 2026-03-02 01:36:46,731 | INFO     | chi2: 7.853396990324861
[2026-03-02 02:37:59] 2026-03-02 01:36:46,731 | INFO     | current chi2=7.853396990324861 (change=9.01136714777237 %)
[2026-03-02 02:37:59] 2026-03-02 01:36:46,731 | INFO     | right removable region: 275
[2026-03-02 02:37:59] 2026-03-02 01:36:46,732 | INFO     | sum of square deviations: 6519285025.0
[2026-03-02 02:37:59] 2026-03-02 01:36:46,735 | INFO     | sum of deviations: 70480450694.5
[2026-03-02 02:37:59] 2026-03-02 01:36:46,735 | INFO     | mean x: 1772406976.5
[2026-03-02 02:37:59] 2026-03-02 01:36:46,735 | INFO     | mean y: 2478564.7210144927
[2026-03-02 02:37:59] 2026-03-02 01:36:46,735 | INFO     | intersect: -19159138397.68447
[2026-03-02 02:37:59] 2026-03-02 01:36:46,736 | INFO     | chi2: 3.635754709414689
[2026-03-02 02:37:59] 2026-03-02 01:36:46,736 | INFO     | current chi2=3.635754709414689 (change=57.87652772383197 %)
[2026-03-02 02:37:59] 2026-03-02 01:36:46,736 | INFO     | sum of square deviations: 6171352920.0
[2026-03-02 02:37:59] 2026-03-02 01:36:46,739 | INFO     | sum of deviations: -3652662188.000004
[2026-03-02 02:37:59] 2026-03-02 01:36:46,739 | INFO     | mean x: 1772407129.0
[2026-03-02 02:37:59] 2026-03-02 01:36:46,739 | INFO     | mean y: 2511017.6014760146
[2026-03-02 02:37:59] 2026-03-02 01:36:46,739 | INFO     | intersect: 1051552384.3428138
[2026-03-02 02:37:59] 2026-03-02 01:36:46,740 | INFO     | chi2: 0.997796945620351
[2026-03-02 02:37:59] 2026-03-02 01:36:46,740 | INFO     | current chi2=0.997796945620351 (change=72.55598836091492 %)
[2026-03-02 02:37:59] 2026-03-02 01:36:46,741 | INFO     | sum of square deviations: 5836025702.5
[2026-03-02 02:37:59] 2026-03-02 01:36:46,743 | INFO     | sum of deviations: -15355629429.999998
[2026-03-02 02:37:59] 2026-03-02 01:36:46,743 | INFO     | mean x: 1772407281.5
[2026-03-02 02:37:59] 2026-03-02 01:36:46,744 | INFO     | mean y: 2516306.977443609
[2026-03-02 02:37:59] 2026-03-02 01:36:46,744 | INFO     | intersect: 4666037477.230153
[2026-03-02 02:37:59] 2026-03-02 01:36:46,744 | INFO     | chi2: 0.9105665569300011
[2026-03-02 02:37:59] 2026-03-02 01:36:46,744 | INFO     | current chi2=0.9105665569300011 (change=8.742298628316304 %)
[2026-03-02 02:37:59] 2026-03-02 01:36:46,744 | INFO     | left removable region: 30
[2026-03-02 02:37:59] 2026-03-02 01:36:46,745 | INFO     | sum of square deviations: 4560048290.0
[2026-03-02 02:37:59] 2026-03-02 01:36:46,747 | INFO     | sum of deviations: 7985767786.0
[2026-03-02 02:37:59] 2026-03-02 01:36:46,747 | INFO     | mean x: 1772407556.0
[2026-03-02 02:37:59] 2026-03-02 01:36:46,748 | INFO     | mean y: 2522550.7102040816
[2026-03-02 02:37:59] 2026-03-02 01:36:46,748 | INFO     | intersect: -3101399658.931087
[2026-03-02 02:37:59] 2026-03-02 01:36:46,748 | INFO     | chi2: 0.0015231890912160973
[2026-03-02 02:37:59] 2026-03-02 01:36:46,748 | INFO     | current memory leak: 1.75 B/s (using 245 data points, chi2=0.00)
[2026-03-02 02:37:59] 2026-03-02 01:36:46,749 | INFO     | could have reported an average CPU frequency of 1999 MHz (13 samples)
[2026-03-02 02:37:59] 2026-03-02 01:36:46,749 | INFO     | ..............................
[2026-03-02 02:37:59] 2026-03-02 01:36:46,749 | INFO     | . Timing measurements:
[2026-03-02 02:37:59] 2026-03-02 01:36:46,750 | INFO     | . get job = 0 s
[2026-03-02 02:37:59] 2026-03-02 01:36:46,750 | INFO     | . initial setup = 124 s
[2026-03-02 02:37:59] 2026-03-02 01:36:46,750 | INFO     | . payload setup = 154 s
[2026-03-02 02:37:59] 2026-03-02 01:36:46,750 | INFO     | . stage-in = 0 s
[2026-03-02 02:37:59] 2026-03-02 01:36:46,750 | INFO     | . payload execution = 17253 s
[2026-03-02 02:37:59] 2026-03-02 01:36:46,750 | INFO     | . stage-out = 4 s
[2026-03-02 02:37:59] 2026-03-02 01:36:46,750 | INFO     | . log creation = 1 s
[2026-03-02 02:37:59] 2026-03-02 01:36:46,750 | INFO     | ..............................
[2026-03-02 02:37:59] 2026-03-02 01:36:47,360 | INFO     | 
[2026-03-02 02:37:59] 2026-03-02 01:36:47,361 | INFO     | job summary report
[2026-03-02 02:37:59] 2026-03-02 01:36:47,361 | INFO     | --------------------------------------------------
[2026-03-02 02:37:59] 2026-03-02 01:36:47,361 | INFO     | PanDA job id: 7034878377
[2026-03-02 02:37:59] 2026-03-02 01:36:47,361 | INFO     | task id: 48838610
[2026-03-02 02:37:59] 2026-03-02 01:36:47,361 | INFO     | errors: (none)
[2026-03-02 02:37:59] 2026-03-02 01:36:47,361 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-02 02:37:59] 2026-03-02 01:36:47,361 | INFO     | pilot state: finished 
[2026-03-02 02:37:59] 2026-03-02 01:36:47,361 | INFO     | transexitcode: 0
[2026-03-02 02:37:59] 2026-03-02 01:36:47,361 | INFO     | exeerrorcode: 0
[2026-03-02 02:37:59] 2026-03-02 01:36:47,362 | INFO     | exeerrordiag: 
[2026-03-02 02:37:59] 2026-03-02 01:36:47,362 | INFO     | exitcode: 0
[2026-03-02 02:37:59] 2026-03-02 01:36:47,362 | INFO     | exitmsg: OK
[2026-03-02 02:37:59] 2026-03-02 01:36:47,362 | INFO     | cpuconsumptiontime: 64766 s
[2026-03-02 02:37:59] 2026-03-02 01:36:47,362 | INFO     | nevents: 400
[2026-03-02 02:37:59] 2026-03-02 01:36:47,362 | INFO     | neventsw: 0
[2026-03-02 02:37:59] 2026-03-02 01:36:47,362 | INFO     | pid: 14901
[2026-03-02 02:37:59] 2026-03-02 01:36:47,362 | INFO     | pgrp: 14901
[2026-03-02 02:37:59] 2026-03-02 01:36:47,362 | INFO     | corecount: 8
[2026-03-02 02:37:59] 2026-03-02 01:36:47,363 | INFO     | event service: False
[2026-03-02 02:37:59] 2026-03-02 01:36:47,363 | INFO     | sizes: {0: 2281149, 1: 2281835, 2: 2282296, 13: 2282296, 17411: 2314402, 17412: 2314401, 17416: 2323641, 17417: 2323779}
[2026-03-02 02:37:59] 2026-03-02 01:36:47,363 | INFO     | --------------------------------------------------
[2026-03-02 02:37:59] 2026-03-02 01:36:47,363 | INFO     | 
[2026-03-02 02:37:59] 2026-03-02 01:36:47,363 | INFO     | executing command: ls -lF /var/lib/boinc/slots/16
[2026-03-02 02:37:59] 2026-03-02 01:36:47,531 | INFO     | time since job start (17431s) is within the limit (349056.0s)
[2026-03-02 02:37:59] 2026-03-02 01:36:47,887 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-02 02:37:59] 2026-03-02 01:36:47,887 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-02 02:37:59] 2026-03-02 01:36:47,887 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-02 02:37:59] 2026-03-02 01:36:47,887 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-02 02:37:59] 2026-03-02 01:36:47,887 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-02 02:37:59] 2026-03-02 01:36:47,887 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-02 02:37:59] 2026-03-02 01:36:47,888 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-02 02:37:59] 2026-03-02 01:36:47,888 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-02 02:37:59] 2026-03-02 01:36:47,888 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-02 02:37:59] 2026-03-02 01:36:47,888 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-02 02:37:59] 2026-03-02 01:36:47,888 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-02 02:37:59] 2026-03-02 01:36:47,888 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-02 02:37:59] 2026-03-02 01:36:47,888 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-02 02:37:59] 2026-03-02 01:36:47,888 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-02 02:37:59] 2026-03-02 01:36:47,889 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-02 02:37:59] 2026-03-02 01:36:47,889 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-02 02:37:59] 2026-03-02 01:36:47,889 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-02 02:37:59] 2026-03-02 01:36:47,889 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-02 02:37:59] 2026-03-02 01:36:47,889 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-02 02:37:59] 2026-03-02 01:36:47,889 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-02 02:37:59] 2026-03-02 01:36:47,889 | INFO     | job 7034878377 has completed (purged errors)
[2026-03-02 02:37:59] 2026-03-02 01:36:47,889 | INFO     | overall cleanup function is called
[2026-03-02 02:37:59] 2026-03-02 01:36:48,903 | INFO     | --- collectZombieJob: --- 10, [14901]
[2026-03-02 02:37:59] 2026-03-02 01:36:48,904 | INFO     | zombie collector waiting for pid 14901
[2026-03-02 02:37:59] 2026-03-02 01:36:48,904 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-02 02:37:59] 2026-03-02 01:36:48,904 | INFO     | collected zombie processes
[2026-03-02 02:37:59] 2026-03-02 01:36:48,904 | INFO     | will attempt to kill all subprocesses of pid=14901
[2026-03-02 02:37:59] 2026-03-02 01:36:49,012 | INFO     | process IDs to be killed: [14901] (in reverse order)
[2026-03-02 02:37:59] 2026-03-02 01:36:50,011 | WARNING  | found no corresponding commands to process id(s)
[2026-03-02 02:37:59] 2026-03-02 01:36:50,011 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-02 02:37:59] 2026-03-02 01:36:50,013 | INFO     | did not find any defunct processes belonging to 14901
[2026-03-02 02:37:59] 2026-03-02 01:36:50,015 | INFO     | did not find any defunct processes belonging to 14901
[2026-03-02 02:37:59] 2026-03-02 01:36:50,015 | INFO     | ready for new job
[2026-03-02 02:37:59] 2026-03-02 01:36:50,015 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-02 02:37:59] 2026-03-02 01:36:50,018 | INFO     | **************************************
[2026-03-02 02:37:59] 2026-03-02 01:36:50,018 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-02 02:37:59] 2026-03-02 01:36:50,018 | INFO     | **************************************
[2026-03-02 02:37:59] 2026-03-02 01:36:50,018 | INFO     | 
[2026-03-02 02:37:59] 2026-03-02 01:36:50,019 | INFO     | pilot is running in a VM
[2026-03-02 02:37:59] 2026-03-02 01:36:50,019 | INFO     | architecture information:
[2026-03-02 02:37:59] 2026-03-02 01:36:50,031 | INFO     | executing command: cat /etc/os-release
[2026-03-02 02:37:59] 2026-03-02 01:36:50,281 | INFO     | cat /etc/os-release:
[2026-03-02 02:37:59] NAME="CentOS Linux"
[2026-03-02 02:37:59] VERSION="7 (Core)"
[2026-03-02 02:37:59] ID="centos"
[2026-03-02 02:37:59] ID_LIKE="rhel fedora"
[2026-03-02 02:37:59] VERSION_ID="7"
[2026-03-02 02:37:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-02 02:37:59] ANSI_COLOR="0;31"
[2026-03-02 02:37:59] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-02 02:37:59] HOME_URL="https://www.centos.org/"
[2026-03-02 02:37:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-02 02:37:59] 
[2026-03-02 02:37:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-02 02:37:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-02 02:37:59] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-02 02:37:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-02 02:37:59] 
[2026-03-02 02:37:59] 2026-03-02 01:36:50,282 | INFO     | **************************************
[2026-03-02 02:37:59] 2026-03-02 01:36:50,785 | INFO     | executing command: df -mP /var/lib/boinc/slots/16
[2026-03-02 02:37:59] 2026-03-02 01:36:51,035 | INFO     | sufficient remaining disk space (497252564992 B)
[2026-03-02 02:37:59] 2026-03-02 01:36:51,036 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-02 02:37:59] 2026-03-02 01:36:51,036 | INFO     | current server update state: UPDATING_FINAL
[2026-03-02 02:37:59] 2026-03-02 01:36:51,036 | INFO     | update_server=False
[2026-03-02 02:37:59] 2026-03-02 01:36:51,036 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-02 02:37:59] 2026-03-02 01:36:51,042 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-02 02:37:59] 2026-03-02 01:36:51,043 | INFO     | aborting loop
[2026-03-02 02:37:59] 2026-03-02 01:36:51,377 | INFO     | all job control threads have been joined
[2026-03-02 02:37:59] 2026-03-02 01:36:51,627 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-02 02:37:59] 2026-03-02 01:36:51,723 | INFO     | all data control threads have been joined
[2026-03-02 02:37:59] 2026-03-02 01:36:51,944 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-02 02:37:59] 2026-03-02 01:36:52,042 | INFO     | [job] retrieve thread has finished
[2026-03-02 02:37:59] 2026-03-02 01:36:52,048 | INFO     | [job] job monitor thread has finished
[2026-03-02 02:37:59] 2026-03-02 01:36:52,066 | INFO     | all payload control threads have been joined
[2026-03-02 02:37:59] 2026-03-02 01:36:52,115 | INFO     | [payload] validate_post thread has finished
[2026-03-02 02:37:59] 2026-03-02 01:36:52,207 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-02 02:37:59] 2026-03-02 01:36:52,317 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-02 02:37:59] 2026-03-02 01:36:52,362 | INFO     | [job] validate thread has finished
[2026-03-02 02:37:59] 2026-03-02 01:36:52,383 | INFO     | [job] control thread has finished
[2026-03-02 02:37:59] 2026-03-02 01:36:52,729 | INFO     | [data] control thread has finished
[2026-03-02 02:37:59] 2026-03-02 01:36:52,763 | INFO     | [job] create_data_payload thread has finished
[2026-03-02 02:37:59] 2026-03-02 01:36:52,834 | INFO     | [payload] validate_pre thread has finished
[2026-03-02 02:37:59] 2026-03-02 01:36:52,840 | INFO     | [payload] execute_payloads thread has finished
[2026-03-02 02:37:59] 2026-03-02 01:36:52,950 | INFO     | [job] queue monitor thread has finished
[2026-03-02 02:37:59] 2026-03-02 01:36:53,072 | INFO     | [payload] control thread has finished
[2026-03-02 02:37:59] 2026-03-02 01:36:53,146 | INFO     | [payload] failed_post thread has finished
[2026-03-02 02:37:59] 2026-03-02 01:36:53,447 | INFO     | [data] copytool_in thread has finished
[2026-03-02 02:37:59] 2026-03-02 01:36:53,634 | INFO     | [data] copytool_out thread has finished
[2026-03-02 02:37:59] 2026-03-02 01:36:56,326 | INFO     | [data] queue_monitor thread has finished
[2026-03-02 02:37:59] 2026-03-02 01:37:20,655 | INFO     | PID=10472 has CPU usage=3.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-02 02:37:59] 2026-03-02 01:37:20,656 | INFO     | .. there are 2 such processes running
[2026-03-02 02:37:59] 2026-03-02 01:37:20,657 | INFO     | found 0 job(s) in 20 queues
[2026-03-02 02:37:59] 2026-03-02 01:37:20,657 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-02 02:37:59] 2026-03-02 01:37:20,657 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-02 02:37:59] 2026-03-02 01:37:46,074 | INFO     | [monitor] cgroup control has ended
[2026-03-02 02:37:59] 2026-03-02 01:37:47,949 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140419949569856)>', '<ExcThread(monitor, started 140419350374144)>']
[2026-03-02 02:37:59] 2026-03-02 01:37:48,825 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-02 02:37:59] 2026-03-02 01:37:48,826 | INFO     | [monitor] control thread has ended
[2026-03-02 02:37:59] 2026-03-02 01:37:52,975 | INFO     | all workflow threads have been joined
[2026-03-02 02:37:59] 2026-03-02 01:37:52,976 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-02 02:37:59] 2026-03-02 01:37:52,976 | INFO     | traces error code: 0
[2026-03-02 02:37:59] 2026-03-02 01:37:52,976 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-02 02:37:59] 2026-03-02 01:37:53,457 [wrapper] ==== pilot stdout END ====
[2026-03-02 02:37:59] 2026-03-02 01:37:53,553 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-02 02:37:59] 2026-03-02 01:37:53,648 [wrapper] pilotpid: 10472
[2026-03-02 02:37:59] 2026-03-02 01:37:53,746 [wrapper] Pilot exit status: 0
[2026-03-02 02:37:59] 2026-03-02 01:37:54,302 [wrapper] pandaids: 7034878377
[2026-03-02 02:37:59] 2026-03-02 01:37:55,759 [wrapper] cleanup supervisor_pilot 21452 10473
[2026-03-02 02:37:59] 2026-03-02 01:37:55,916 [wrapper] Test setup, not cleaning
[2026-03-02 02:37:59] 2026-03-02 01:37:55,978 [wrapper] apfmon messages muted
[2026-03-02 02:37:59] 2026-03-02 01:37:56,084 [wrapper] ==== wrapper stdout END ====
[2026-03-02 02:37:59] 2026-03-02 01:37:56,201 [wrapper] ==== wrapper stderr END ====
[2026-03-02 02:37:59]  *** Error codes and diagnostics ***
[2026-03-02 02:37:59]     "exeErrorCode": 0,
[2026-03-02 02:37:59]     "exeErrorDiag": "",
[2026-03-02 02:37:59]     "pilotErrorCode": 0,
[2026-03-02 02:37:59]     "pilotErrorDiag": "",
[2026-03-02 02:37:59]  *** Listing of results directory ***
[2026-03-02 02:37:59] total 473036
[2026-03-02 02:37:59] -rw-r--r--. 1 boinc boinc    584627 Mar  1 11:58 pilot3.tar.gz
[2026-03-02 02:37:59] -rwx------. 1 boinc boinc     36322 Mar  1 12:07 runpilot2-wrapper.sh
[2026-03-02 02:37:59] -rw-r--r--. 1 boinc boinc      5111 Mar  1 12:07 queuedata.json
[2026-03-02 02:37:59] -rw-r--r--. 1 boinc boinc       100 Mar  1 21:39 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-02 02:37:59] -rwxr-xr-x. 1 boinc boinc      7986 Mar  1 21:39 run_atlas
[2026-03-02 02:37:59] -rw-r--r--. 1 boinc boinc       105 Mar  1 21:39 job.xml
[2026-03-02 02:37:59] -rw-r--r--. 1 boinc boinc      6392 Mar  1 21:39 init_data.xml
[2026-03-02 02:37:59] -rw-r--r--. 2 boinc boinc 272417521 Mar  1 21:39 EVNT.48343779._000079.pool.root.1
[2026-03-02 02:37:59] -rw-r--r--. 2 boinc boinc     15845 Mar  1 21:39 start_atlas.sh
[2026-03-02 02:37:59] drwxrwx--x. 2 boinc boinc        68 Mar  1 21:39 shared
[2026-03-02 02:37:59] -rw-r--r--. 2 boinc boinc    597974 Mar  1 21:39 input.tar.gz
[2026-03-02 02:37:59] -rw-r--r--. 1 boinc boinc         0 Mar  1 21:39 boinc_lockfile
[2026-03-02 02:37:59] -rw-r--r--. 1 boinc boinc      2578 Mar  1 21:39 pandaJob.out
[2026-03-02 02:37:59] -rw-------. 1 boinc boinc       415 Mar  1 21:46 workernode_map.json
[2026-03-02 02:37:59] -rw-------. 1 boinc boinc    998184 Mar  1 21:46 agis_schedconf.cvmfs.json
[2026-03-02 02:37:59] drwx------. 5 boinc boinc      4096 Mar  1 21:46 pilot3
[2026-03-02 02:37:59] -rw-------. 1 boinc boinc 202123640 Mar  2 02:35 HITS.48838610._002015.pool.root.1
[2026-03-02 02:37:59] -rw-r--r--. 1 boinc boinc       531 Mar  2 02:35 boinc_task_state.xml
[2026-03-02 02:37:59] -rw-------. 1 boinc boinc      1011 Mar  2 02:36 memory_monitor_summary.json
[2026-03-02 02:37:59] -rw-------. 1 boinc boinc   1513015 Mar  2 02:36 agis_ddmendpoints.agis.ALL.json
[2026-03-02 02:37:59] -rw-------. 1 boinc boinc    516138 Mar  2 02:36 log.48838610._002015.job.log.tgz.1
[2026-03-02 02:37:59] -rw-------. 1 boinc boinc      6315 Mar  2 02:36 heartbeat.json
[2026-03-02 02:37:59] -rw-------. 1 boinc boinc        95 Mar  2 02:37 pilot_heartbeat.json
[2026-03-02 02:37:59] -rw-r--r--. 1 boinc boinc      8192 Mar  2 02:37 boinc_mmap_file
[2026-03-02 02:37:59] -rw-r--r--. 1 boinc boinc        28 Mar  2 02:37 wrapper_checkpoint.txt
[2026-03-02 02:37:59] -rw-------. 1 boinc boinc      4881 Mar  2 02:37 pilotlog.txt
[2026-03-02 02:37:59] -rw-------. 1 boinc boinc   2450207 Mar  2 02:37 log.48838610._002015.job.log.1
[2026-03-02 02:37:59] -rw-------. 1 boinc boinc       357 Mar  2 02:37 output.list
[2026-03-02 02:37:59] -rw-r--r--. 1 boinc boinc       620 Mar  2 02:37 runtime_log
[2026-03-02 02:37:59] -rw-------. 1 boinc boinc   2979840 Mar  2 02:37 result.tar.gz
[2026-03-02 02:37:59] -rw-r--r--. 1 boinc boinc      8832 Mar  2 02:37 runtime_log.err
[2026-03-02 02:37:59] -rw-------. 1 boinc boinc       655 Mar  2 02:37 kkYNDmiotG9n9Rq4apOajLDm4fhM0noT9bVooX4SDm857KDmX6QOum.diag
[2026-03-02 02:37:59] -rw-r--r--. 1 boinc boinc     20727 Mar  2 02:37 stderr.txt
[2026-03-02 02:37:59] HITS file was successfully produced:
[2026-03-02 02:37:59] -rw-------. 1 boinc boinc 202123640 Mar  2 02:35 shared/HITS.pool.root.1
[2026-03-02 02:37:59]  *** Contents of shared directory: ***
[2026-03-02 02:37:59] total 466936
[2026-03-02 02:37:59] -rw-r--r--. 2 boinc boinc 272417521 Mar  1 21:39 ATLAS.root_0
[2026-03-02 02:37:59] -rw-r--r--. 2 boinc boinc     15845 Mar  1 21:39 start_atlas.sh
[2026-03-02 02:37:59] -rw-r--r--. 2 boinc boinc    597974 Mar  1 21:39 input.tar.gz
[2026-03-02 02:37:59] -rw-------. 1 boinc boinc 202123640 Mar  2 02:35 HITS.pool.root.1
[2026-03-02 02:37:59] -rw-------. 1 boinc boinc   2979840 Mar  2 02:37 result.tar.gz
02:38:01 (6495): run_atlas exited; CPU time 64956.906587
02:38:01 (6495): called boinc_finish(0)

</stderr_txt>
]]>

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