Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
22:30:02 (3507087): wrapper (7.7.26015): starting
22:30:02 (3507087): wrapper: running run_atlas (--nthreads 4)
[2026-03-01 22:30:02] Arguments: --nthreads 4
[2026-03-01 22:30:02] Threads: 4
[2026-03-01 22:30:02] Checking for CVMFS
[2026-03-01 22:30:02] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-01 22:30:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-01 22:30:03] Running cvmfs_config stat atlas.cern.ch
[2026-03-01 22:30:03] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-01 22:30:03] 2.9.2.0 2551655 6001 96568 156783 0 49 28185112 36864001 0 130560 0 2643778 99.983 238636 10162 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-03-01 22:30:03] CVMFS is ok
[2026-03-01 22:30:03] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-01 22:30:03] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-01 22:30:03] Further information can be found at the LHC@home message board.
[2026-03-01 22:30:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-01 22:30:03] Checking for apptainer binary...
[2026-03-01 22:30:03] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-01 22:30:03] Running /usr/bin/apptainer --version
[2026-03-01 22:30:03] apptainer version 1.4.1-1.1
[2026-03-01 22:30:03] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-01 22:30:03] thA332a
[2026-03-01 22:30:03] apptainer works
[2026-03-01 22:30:03] Set ATHENA_PROC_NUMBER=4
[2026-03-01 22:30:03] Set ATHENA_CORE_NUMBER=4
[2026-03-01 22:30:03] Starting ATLAS job with PandaID=7034441699
[2026-03-01 22:30:03] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-01 23:54:44]  *** The last 200 lines of the pilot log: ***
[2026-03-01 23:54:44] 2026-03-01 22:54:14,392 | INFO     | executing command: cat /etc/os-release
[2026-03-01 23:54:44] 2026-03-01 22:54:14,406 | INFO     | cat /etc/os-release:
[2026-03-01 23:54:44] NAME="CentOS Linux"
[2026-03-01 23:54:44] VERSION="7 (Core)"
[2026-03-01 23:54:44] ID="centos"
[2026-03-01 23:54:44] ID_LIKE="rhel fedora"
[2026-03-01 23:54:44] VERSION_ID="7"
[2026-03-01 23:54:44] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-01 23:54:44] ANSI_COLOR="0;31"
[2026-03-01 23:54:44] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-01 23:54:44] HOME_URL="https://www.centos.org/"
[2026-03-01 23:54:44] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-01 23:54:44] 
[2026-03-01 23:54:44] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-01 23:54:44] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-01 23:54:44] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-01 23:54:44] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-01 23:54:44] 
[2026-03-01 23:54:44] 2026-03-01 22:54:14,407 | INFO     | **************************************
[2026-03-01 23:54:44] 2026-03-01 22:54:14,910 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-03-01 23:54:44] 2026-03-01 22:54:14,929 | INFO     | sufficient remaining disk space (331305975808 B)
[2026-03-01 23:54:44] 2026-03-01 22:54:14,929 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-01 23:54:44] 2026-03-01 22:54:14,929 | INFO     | current server update state: UPDATING_FINAL
[2026-03-01 23:54:44] 2026-03-01 22:54:14,929 | INFO     | update_server=False
[2026-03-01 23:54:44] 2026-03-01 22:54:14,929 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-01 23:54:44] 2026-03-01 22:54:14,929 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-01 23:54:44] 2026-03-01 22:54:14,930 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-01 23:54:44] 2026-03-01 22:54:15,269 | INFO     | all payload control threads have been joined
[2026-03-01 23:54:44] 2026-03-01 22:54:15,466 | INFO     | all data control threads have been joined
[2026-03-01 23:54:44] 2026-03-01 22:54:15,907 | INFO     | all job control threads have been joined
[2026-03-01 23:54:44] 2026-03-01 22:54:15,935 | INFO     | [job] retrieve thread has finished
[2026-03-01 23:54:44] 2026-03-01 22:54:15,935 | INFO     | [job] queue monitor thread has finished
[2026-03-01 23:54:44] 2026-03-01 22:54:15,995 | INFO     | [payload] validate_pre thread has finished
[2026-03-01 23:54:44] 2026-03-01 22:54:16,152 | INFO     | [data] copytool_in thread has finished
[2026-03-01 23:54:44] 2026-03-01 22:54:16,178 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-01 23:54:44] 2026-03-01 22:54:16,275 | INFO     | [payload] control thread has finished
[2026-03-01 23:54:44] 2026-03-01 22:54:16,472 | INFO     | [data] control thread has finished
[2026-03-01 23:54:44] 2026-03-01 22:54:16,723 | INFO     | [payload] execute_payloads thread has finished
[2026-03-01 23:54:44] 2026-03-01 22:54:16,913 | INFO     | [job] control thread has finished
[2026-03-01 23:54:44] 2026-03-01 22:54:16,963 | INFO     | [payload] validate_post thread has finished
[2026-03-01 23:54:44] 2026-03-01 22:54:17,262 | INFO     | [payload] failed_post thread has finished
[2026-03-01 23:54:44] 2026-03-01 22:54:17,308 | INFO     | [job] validate thread has finished
[2026-03-01 23:54:44] 2026-03-01 22:54:17,426 | INFO     | [job] create_data_payload thread has finished
[2026-03-01 23:54:44] 2026-03-01 22:54:18,181 | INFO     | [data] copytool_out thread has finished
[2026-03-01 23:54:44] 2026-03-01 22:54:18,937 | INFO     | [data] queue_monitor thread has finished
[2026-03-01 23:54:44] 2026-03-01 22:54:19,670 | WARNING  | process 3515713 can no longer be monitored (due to stat problems) - aborting
[2026-03-01 23:54:44] 2026-03-01 22:54:19,701 | INFO     | using path: /local/data/boinc/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-01 23:54:44] 2026-03-01 22:54:19,702 | INFO     | using path: /local/data/boinc/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-01 23:54:44] 2026-03-01 22:54:19,702 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-03-01 23:54:44] 2026-03-01 22:54:19,702 | WARNING  | maxPSS not found in memory monitor output
[2026-03-01 23:54:44] 2026-03-01 22:54:19,702 | INFO     | skipping file size check of payload stdout file (/local/data/boinc/slots/0/PanDA_Pilot-7034441699/payload.stdout) since it has not been created yet
[2026-03-01 23:54:44] 2026-03-01 22:54:19,702 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-03-01 23:54:44] 2026-03-01 22:54:19,717 | INFO     | sufficient remaining disk space (331305975808 B)
[2026-03-01 23:54:44] 2026-03-01 22:54:19,717 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-03-01 23:54:44] 2026-03-01 22:54:19,717 | INFO     | output file size check: skipping output file /local/data/boinc/slots/0/PanDA_Pilot-7034441699/HITS.48838521._001360.pool.root.1 since it does not exist
[2026-03-01 23:54:44] 2026-03-01 22:54:19,757 | INFO     | number of running child processes to parent process 3515713: 1
[2026-03-01 23:54:44] 2026-03-01 22:54:19,757 | INFO     | maximum number of monitored processes: 6
[2026-03-01 23:54:44] 2026-03-01 22:54:19,757 | INFO     | aborting job monitoring since job object (job id=7034441699) has expired
[2026-03-01 23:54:44] 2026-03-01 22:54:19,758 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-01 23:54:44] 2026-03-01 22:54:19,758 | INFO     | will abort loop
[2026-03-01 23:54:44] 2026-03-01 22:54:20,763 | INFO     | [job] job monitor thread has finished
[2026-03-01 23:54:44] 2026-03-01 22:54:21,872 | INFO     | [monitor] cgroup control has ended
[2026-03-01 23:54:44] 2026-03-01 22:54:25,615 | INFO     | job.realtimelogging is not enabled
[2026-03-01 23:54:44] 2026-03-01 22:54:26,621 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-01 23:54:44] 2026-03-01 22:54:27,128 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139705226774336)>', '<ExcThread(monitor, started 139703995062016)>']
[2026-03-01 23:54:44] 2026-03-01 22:54:32,154 | INFO     | all workflow threads have been joined
[2026-03-01 23:54:44] 2026-03-01 22:54:32,154 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-01 23:54:44] 2026-03-01 22:54:32,154 | INFO     | traces error code: 0
[2026-03-01 23:54:44] 2026-03-01 22:54:32,155 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-01 23:54:44] 2026-03-01 22:54:44,556 | INFO     | PID=3511195 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-01 23:54:44] 2026-03-01 22:54:44,556 | INFO     | found 0 job(s) in 20 queues
[2026-03-01 23:54:44] 2026-03-01 22:54:44,556 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-01 23:54:44] 2026-03-01 22:54:44,556 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-01 23:54:44] 2026-03-01 22:54:44,556 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-01 23:54:44] 2026-03-01 22:54:44,556 | INFO     | [monitor] control thread has ended
[2026-03-01 23:54:44] 2026-03-01 22:54:44,632 [wrapper] ==== pilot stdout END ====
[2026-03-01 23:54:44] 2026-03-01 22:54:44,636 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-01 23:54:44] 2026-03-01 22:54:44,640 [wrapper] pilotpid: 3511195
[2026-03-01 23:54:44] 2026-03-01 22:54:44,645 [wrapper] Pilot exit status: 0
[2026-03-01 23:54:44] 2026-03-01 22:54:44,657 [wrapper] pandaids: 7034441699
[2026-03-01 23:54:44] 2026-03-01 22:54:44,679 [wrapper] cleanup supervisor_pilot 3521616 3511196
[2026-03-01 23:54:44] 2026-03-01 22:54:44,684 [wrapper] Test setup, not cleaning
[2026-03-01 23:54:44] 2026-03-01 22:54:44,688 [wrapper] apfmon messages muted
[2026-03-01 23:54:44] 2026-03-01 22:54:44,692 [wrapper] ==== wrapper stdout END ====
[2026-03-01 23:54:44] 2026-03-01 22:54:44,696 [wrapper] ==== wrapper stderr END ====
[2026-03-01 23:54:44]  *** Error codes and diagnostics ***
[2026-03-01 23:54:44]     "exeErrorCode": 0,
[2026-03-01 23:54:44]     "exeErrorDiag": "",
[2026-03-01 23:54:44]     "pilotErrorCode": 0,
[2026-03-01 23:54:44]     "pilotErrorDiag": "",
[2026-03-01 23:54:44]  *** Listing of results directory ***
[2026-03-01 23:54:44] total 474432
[2026-03-01 23:54:44] -rw-r--r-- 1 boinc boinc    584627 Mar  1 06:54 pilot3.tar.gz
[2026-03-01 23:54:44] -rwx------ 1 boinc boinc     36322 Mar  1 06:57 runpilot2-wrapper.sh
[2026-03-01 23:54:44] -rw-r--r-- 1 boinc boinc      5111 Mar  1 06:59 queuedata.json
[2026-03-01 23:54:44] -rw-r--r-- 1 boinc boinc       100 Mar  1 22:30 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-01 23:54:44] -rwxr-xr-x 1 boinc boinc      7986 Mar  1 22:30 run_atlas
[2026-03-01 23:54:44] -rw-r--r-- 1 boinc boinc       105 Mar  1 22:30 job.xml
[2026-03-01 23:54:44] -rw-r--r-- 2 boinc boinc 272395346 Mar  1 22:30 EVNT.48343683._000055.pool.root.1
[2026-03-01 23:54:44] -rw-r--r-- 2 boinc boinc    597967 Mar  1 22:30 input.tar.gz
[2026-03-01 23:54:44] -rw-r--r-- 2 boinc boinc     15845 Mar  1 22:30 start_atlas.sh
[2026-03-01 23:54:44] drwxrwx--x 2 boinc boinc      4096 Mar  1 22:30 shared
[2026-03-01 23:54:44] -rw-r--r-- 1 boinc boinc         0 Mar  1 22:30 boinc_setup_complete
[2026-03-01 23:54:44] -rw-r--r-- 1 boinc boinc      6370 Mar  1 22:30 init_data.xml
[2026-03-01 23:54:44] -rw-r--r-- 1 boinc boinc         0 Mar  1 22:30 boinc_lockfile
[2026-03-01 23:54:44] -rw-r--r-- 1 boinc boinc      2563 Mar  1 22:30 pandaJob.out
[2026-03-01 23:54:44] -rw------- 1 boinc boinc    998184 Mar  1 22:30 agis_schedconf.cvmfs.json
[2026-03-01 23:54:44] -rw------- 1 boinc boinc   1513015 Mar  1 22:30 agis_ddmendpoints.agis.ALL.json
[2026-03-01 23:54:44] -rw------- 1 boinc boinc       428 Mar  1 22:30 workernode_map.json
[2026-03-01 23:54:44] drwx------ 5 boinc boinc      4096 Mar  1 22:30 pilot3
[2026-03-01 23:54:44] -rw------- 1 boinc boinc 207481010 Mar  1 23:53 HITS.48838521._001360.pool.root.1
[2026-03-01 23:54:44] -rw-r--r-- 1 boinc boinc       529 Mar  1 23:53 boinc_task_state.xml
[2026-03-01 23:54:44] -rw------- 1 boinc boinc      1019 Mar  1 23:54 memory_monitor_summary.json
[2026-03-01 23:54:44] -rw------- 1 boinc boinc    274368 Mar  1 23:54 log.48838521._001360.job.log.tgz.1
[2026-03-01 23:54:44] -rw------- 1 boinc boinc      6314 Mar  1 23:54 heartbeat.json
[2026-03-01 23:54:44] -rw-r--r-- 1 boinc boinc      8192 Mar  1 23:54 boinc_mmap_file
[2026-03-01 23:54:44] -rw-r--r-- 1 boinc boinc        27 Mar  1 23:54 wrapper_checkpoint.txt
[2026-03-01 23:54:44] -rw------- 1 boinc boinc       747 Mar  1 23:54 pilotlog.txt
[2026-03-01 23:54:44] -rw------- 1 boinc boinc        95 Mar  1 23:54 pilot_heartbeat.json
[2026-03-01 23:54:44] -rw------- 1 boinc boinc    737801 Mar  1 23:54 log.48838521._001360.job.log.1
[2026-03-01 23:54:44] -rw------- 1 boinc boinc       357 Mar  1 23:54 output.list
[2026-03-01 23:54:44] -rw-r--r-- 1 boinc boinc       620 Mar  1 23:54 runtime_log
[2026-03-01 23:54:44] -rw------- 1 boinc boinc   1034240 Mar  1 23:54 result.tar.gz
[2026-03-01 23:54:44] -rw-r--r-- 1 boinc boinc      8901 Mar  1 23:54 runtime_log.err
[2026-03-01 23:54:44] -rw------- 1 boinc boinc       658 Mar  1 23:54 XfiKDmMzoG9n9Rq4apOajLDm4fhM0noT9bVooX4SDmNL7KDmWXfc9n.diag
[2026-03-01 23:54:44] -rw-r--r-- 1 boinc boinc     10767 Mar  1 23:54 stderr.txt
[2026-03-01 23:54:44] HITS file was successfully produced:
[2026-03-01 23:54:44] -rw------- 1 boinc boinc 207481010 Mar  1 23:53 shared/HITS.pool.root.1
[2026-03-01 23:54:44]  *** Contents of shared directory: ***
[2026-03-01 23:54:44] total 470252
[2026-03-01 23:54:44] -rw-r--r-- 2 boinc boinc 272395346 Mar  1 22:30 ATLAS.root_0
[2026-03-01 23:54:44] -rw-r--r-- 2 boinc boinc    597967 Mar  1 22:30 input.tar.gz
[2026-03-01 23:54:44] -rw-r--r-- 2 boinc boinc     15845 Mar  1 22:30 start_atlas.sh
[2026-03-01 23:54:44] -rw------- 1 boinc boinc 207481010 Mar  1 23:53 HITS.pool.root.1
[2026-03-01 23:54:44] -rw------- 1 boinc boinc   1034240 Mar  1 23:54 result.tar.gz
23:54:46 (3507087): run_atlas exited; CPU time 19023.608383
23:54:46 (3507087): called boinc_finish(0)

</stderr_txt>
]]>

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