Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
18:13:48 (1445200): wrapper (7.7.26015): starting
18:13:48 (1445200): wrapper: running run_atlas (--nthreads 4)
[2026-03-01 18:13:48] Arguments: --nthreads 4
[2026-03-01 18:13:48] Threads: 4
[2026-03-01 18:13:48] Checking for CVMFS
[2026-03-01 18:13:48] No cvmfs_config command found, will try listing directly
[2026-03-01 18:13:48] CVMFS is ok
[2026-03-01 18:13:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-01 18:13:48] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-01 18:13:48] Further information can be found at the LHC@home message board.
[2026-03-01 18:13:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-01 18:13:48] Checking for apptainer binary...
[2026-03-01 18:13:48] which: no apptainer in ((null))
[2026-03-01 18:13:48] apptainer is not installed, using version from CVMFS
[2026-03-01 18:13:48] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-01 18:13:49] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot68/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut22.grid.cesnet.cz
[2026-03-01 18:13:49] apptainer works
[2026-03-01 18:13:49] Set ATHENA_PROC_NUMBER=4
[2026-03-01 18:13:49] Set ATHENA_CORE_NUMBER=4
[2026-03-01 18:13:49] Starting ATLAS job with PandaID=7034857137
[2026-03-01 18:13:49] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot68/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-01 19:21:13]  *** The last 200 lines of the pilot log: ***
[2026-03-01 19:21:13]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-03-01 19:21:13]  is_altstaged=None
[2026-03-01 19:21:13]  is_tar=False
[2026-03-01 19:21:13]  lfn=log.48700922._002436.job.log.tgz.1
[2026-03-01 19:21:13]  mtime=0
[2026-03-01 19:21:13]  protocol_id=None
[2026-03-01 19:21:13]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-01 19:21:13]  replicas=None
[2026-03-01 19:21:13]  scope=mc23_13p6TeV
[2026-03-01 19:21:13]  status=None
[2026-03-01 19:21:13]  status_code=0
[2026-03-01 19:21:13]  storage_token=
[2026-03-01 19:21:13]  surl=/var/lib/boinc/var/slot68/slots/0/PanDA_Pilot-7034857137/log.48700922._002436.job.log.tgz.1
[2026-03-01 19:21:13]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c7/55/log.48700922._002436.job.log.tgz.1
[2026-03-01 19:21:13]  workdir=None
[2026-03-01 19:21:13] ]
[2026-03-01 19:21:13] 2026-03-01 18:20:04,248 | INFO     | transferring file log.48700922._002436.job.log.tgz.1 from /var/lib/boinc/var/slot68/slots/0/PanDA_Pilot-7034857137/log.48700922._002436.job.log.tgz.1 to /var/lib/b
[2026-03-01 19:21:13] 2026-03-01 18:20:04,248 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot68/slots/0/PanDA_Pilot-7034857137/log.48700922._002436.job.log.tgz.1 /var/lib/boinc/var/slot68/slots/0/lo
[2026-03-01 19:21:13] 2026-03-01 18:20:04,266 | INFO     | adding to output.list: log.48700922._002436.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c7/55/log.48700922._002436.job.log.tg
[2026-03-01 19:21:13] 2026-03-01 18:20:04,266 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-01 19:21:13] 2026-03-01 18:20:04,266 | INFO     | summary of transferred files:
[2026-03-01 19:21:13] 2026-03-01 18:20:04,266 | INFO     |  -- lfn=log.48700922._002436.job.log.tgz.1, status_code=0, status=transferred
[2026-03-01 19:21:13] 2026-03-01 18:20:04,266 | INFO     | stage-out finished correctly
[2026-03-01 19:21:13] 2026-03-01 18:20:04,317 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-01 19:21:13] 2026-03-01 18:20:04,337 | INFO     | time since job start (3963s) is within the limit (349056.0s)
[2026-03-01 19:21:13] 2026-03-01 18:20:05,589 | INFO     | monitor loop #290: job 0:7034857137 is in state 'finished'
[2026-03-01 19:21:13] 2026-03-01 18:20:05,589 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-01 19:21:13] 2026-03-01 18:20:06,351 | INFO     | time since job start (3965s) is within the limit (349056.0s)
[2026-03-01 19:21:13] 2026-03-01 18:20:06,351 | INFO     | 3970s have passed since pilot start - server update state is 'RUNNING'
[2026-03-01 19:21:13] 2026-03-01 18:20:06,982 | INFO     | job 7034857137 has state=finished
[2026-03-01 19:21:13] 2026-03-01 18:20:06,982 | INFO     | preparing for final server update for job 7034857137 in state='finished'
[2026-03-01 19:21:13] 2026-03-01 18:20:06,982 | INFO     | reading metadata from: /var/lib/boinc/var/slot68/slots/0/PanDA_Pilot-7034857137/jobReport.json
[2026-03-01 19:21:13] 2026-03-01 18:20:06,984 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot68/slots/0/workernode_map.json
[2026-03-01 19:21:13] 2026-03-01 18:20:06,984 | INFO     | this job has now completed (state=finished)
[2026-03-01 19:21:13] 2026-03-01 18:20:06,984 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-01 19:21:13] 2026-03-01 18:20:06,984 | INFO     | log transfer has been attempted: DONE
[2026-03-01 19:21:13] 2026-03-01 18:20:06,984 | INFO     | job 7034857137 has finished - writing final server update
[2026-03-01 19:21:13] 2026-03-01 18:20:06,985 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_16212/.job.ad'
[2026-03-01 19:21:13] 2026-03-01 18:20:06,985 | INFO     | total number of processed events: 400 (read)
[2026-03-01 19:21:13] 2026-03-01 18:20:07,005 | INFO     | using path: /var/lib/boinc/var/slot68/slots/0/PanDA_Pilot-7034857137/memory_monitor_summary.json (trf name=prmon)
[2026-03-01 19:21:13] 2026-03-01 18:20:07,006 | INFO     | extracted standard info from prmon json
[2026-03-01 19:21:13] 2026-03-01 18:20:07,006 | INFO     | extracted standard memory fields from prmon json
[2026-03-01 19:21:13] 2026-03-01 18:20:07,006 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-01 19:21:13] 2026-03-01 18:20:07,006 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-01 19:21:13] 2026-03-01 18:20:07,006 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-01 19:21:13] 2026-03-01 18:20:07,007 | INFO     | fitting pss+swap vs Time
[2026-03-01 19:21:13] 2026-03-01 18:20:07,008 | INFO     | sum of square deviations: 60482994.5
[2026-03-01 19:21:13] 2026-03-01 18:20:07,008 | INFO     | sum of deviations: -177718681.0
[2026-03-01 19:21:13] 2026-03-01 18:20:07,008 | INFO     | mean x: 1772387305.5
[2026-03-01 19:21:13] 2026-03-01 18:20:07,008 | INFO     | mean y: 2335150.896551724
[2026-03-01 19:21:13] 2026-03-01 18:20:07,008 | INFO     | intersect: 5210184675.51961
[2026-03-01 19:21:13] 2026-03-01 18:20:07,008 | INFO     | chi2: 0.00020767479040668854
[2026-03-01 19:21:13] 2026-03-01 18:20:07,008 | INFO     | current memory leak: -2.94 B/s (using 58 data points, chi2=0.00)
[2026-03-01 19:21:13] 2026-03-01 18:20:07,008 | INFO     | could have reported an average CPU frequency of 3593 MHz (6 samples)
[2026-03-01 19:21:13] 2026-03-01 18:20:07,008 | INFO     | ..............................
[2026-03-01 19:21:13] 2026-03-01 18:20:07,008 | INFO     | . Timing measurements:
[2026-03-01 19:21:13] 2026-03-01 18:20:07,008 | INFO     | . get job = 0 s
[2026-03-01 19:21:13] 2026-03-01 18:20:07,009 | INFO     | . initial setup = 5 s
[2026-03-01 19:21:13] 2026-03-01 18:20:07,009 | INFO     | . payload setup = 5 s
[2026-03-01 19:21:13] 2026-03-01 18:20:07,009 | INFO     | . stage-in = 0 s
[2026-03-01 19:21:13] 2026-03-01 18:20:07,009 | INFO     | . payload execution = 3942 s
[2026-03-01 19:21:13] 2026-03-01 18:20:07,009 | INFO     | . stage-out = 0 s
[2026-03-01 19:21:13] 2026-03-01 18:20:07,009 | INFO     | . log creation = 0 s
[2026-03-01 19:21:13] 2026-03-01 18:20:07,009 | INFO     | ..............................
[2026-03-01 19:21:13] 2026-03-01 18:20:07,060 | INFO     | 
[2026-03-01 19:21:13] 2026-03-01 18:20:07,061 | INFO     | job summary report
[2026-03-01 19:21:13] 2026-03-01 18:20:07,061 | INFO     | --------------------------------------------------
[2026-03-01 19:21:13] 2026-03-01 18:20:07,064 | INFO     | PanDA job id: 7034857137
[2026-03-01 19:21:13] 2026-03-01 18:20:07,064 | INFO     | task id: 48700922
[2026-03-01 19:21:13] 2026-03-01 18:20:07,064 | INFO     | errors: (none)
[2026-03-01 19:21:13] 2026-03-01 18:20:07,064 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-01 19:21:13] 2026-03-01 18:20:07,064 | INFO     | pilot state: finished 
[2026-03-01 19:21:13] 2026-03-01 18:20:07,064 | INFO     | transexitcode: 0
[2026-03-01 19:21:13] 2026-03-01 18:20:07,064 | INFO     | exeerrorcode: 0
[2026-03-01 19:21:13] 2026-03-01 18:20:07,064 | INFO     | exeerrordiag: 
[2026-03-01 19:21:13] 2026-03-01 18:20:07,064 | INFO     | exitcode: 0
[2026-03-01 19:21:13] 2026-03-01 18:20:07,064 | INFO     | exitmsg: OK
[2026-03-01 19:21:13] 2026-03-01 18:20:07,064 | INFO     | cpuconsumptiontime: 15009 s
[2026-03-01 19:21:13] 2026-03-01 18:20:07,064 | INFO     | nevents: 400
[2026-03-01 19:21:13] 2026-03-01 18:20:07,064 | INFO     | neventsw: 0
[2026-03-01 19:21:13] 2026-03-01 18:20:07,064 | INFO     | pid: 1455554
[2026-03-01 19:21:13] 2026-03-01 18:20:07,064 | INFO     | pgrp: 1455554
[2026-03-01 19:21:13] 2026-03-01 18:20:07,064 | INFO     | corecount: 4
[2026-03-01 19:21:13] 2026-03-01 18:20:07,064 | INFO     | event service: False
[2026-03-01 19:21:13] 2026-03-01 18:20:07,064 | INFO     | sizes: {0: 2281789, 1: 2282250, 11: 2282250, 3951: 2308138, 3952: 2317214, 3955: 2317352}
[2026-03-01 19:21:13] 2026-03-01 18:20:07,064 | INFO     | --------------------------------------------------
[2026-03-01 19:21:13] 2026-03-01 18:20:07,064 | INFO     | 
[2026-03-01 19:21:13] 2026-03-01 18:20:07,064 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot68/slots/0
[2026-03-01 19:21:13] 2026-03-01 18:20:07,087 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-01 19:21:13] 2026-03-01 18:20:07,087 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-01 19:21:13] 2026-03-01 18:20:07,087 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-01 19:21:13] 2026-03-01 18:20:07,087 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-01 19:21:13] 2026-03-01 18:20:07,087 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-01 19:21:13] 2026-03-01 18:20:07,087 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-01 19:21:13] 2026-03-01 18:20:07,087 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-01 19:21:13] 2026-03-01 18:20:07,087 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-01 19:21:13] 2026-03-01 18:20:07,087 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-01 19:21:13] 2026-03-01 18:20:07,087 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-01 19:21:13] 2026-03-01 18:20:07,087 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-01 19:21:13] 2026-03-01 18:20:07,087 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-01 19:21:13] 2026-03-01 18:20:07,087 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-01 19:21:13] 2026-03-01 18:20:07,087 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-01 19:21:13] 2026-03-01 18:20:07,087 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-01 19:21:13] 2026-03-01 18:20:07,087 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-01 19:21:13] 2026-03-01 18:20:07,087 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-01 19:21:13] 2026-03-01 18:20:07,087 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-01 19:21:13] 2026-03-01 18:20:07,087 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-01 19:21:13] 2026-03-01 18:20:07,087 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-01 19:21:13] 2026-03-01 18:20:07,088 | INFO     | job 7034857137 has completed (purged errors)
[2026-03-01 19:21:13] 2026-03-01 18:20:07,088 | INFO     | overall cleanup function is called
[2026-03-01 19:21:13] 2026-03-01 18:20:08,094 | INFO     | --- collectZombieJob: --- 10, [1455554]
[2026-03-01 19:21:13] 2026-03-01 18:20:08,094 | INFO     | zombie collector waiting for pid 1455554
[2026-03-01 19:21:13] 2026-03-01 18:20:08,094 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-01 19:21:13] 2026-03-01 18:20:08,094 | INFO     | collected zombie processes
[2026-03-01 19:21:13] 2026-03-01 18:20:08,094 | INFO     | will attempt to kill all subprocesses of pid=1455554
[2026-03-01 19:21:13] 2026-03-01 18:20:08,558 | INFO     | process IDs to be killed: [1455554] (in reverse order)
[2026-03-01 19:21:13] 2026-03-01 18:20:08,781 | WARNING  | found no corresponding commands to process id(s)
[2026-03-01 19:21:13] 2026-03-01 18:20:08,781 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-01 19:21:13] 2026-03-01 18:20:08,811 | INFO     | did not find any defunct processes belonging to 1455554
[2026-03-01 19:21:13] 2026-03-01 18:20:08,841 | INFO     | did not find any defunct processes belonging to 1455554
[2026-03-01 19:21:13] 2026-03-01 18:20:08,841 | INFO     | ready for new job
[2026-03-01 19:21:13] 2026-03-01 18:20:08,841 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-01 19:21:13] 2026-03-01 18:20:08,842 | INFO     | **************************************
[2026-03-01 19:21:13] 2026-03-01 18:20:08,843 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-01 19:21:13] 2026-03-01 18:20:08,843 | INFO     | **************************************
[2026-03-01 19:21:13] 2026-03-01 18:20:08,843 | INFO     | 
[2026-03-01 19:21:13] 2026-03-01 18:20:08,850 | INFO     | architecture information:
[2026-03-01 19:21:13] 2026-03-01 18:20:08,850 | INFO     | executing command: cat /etc/os-release
[2026-03-01 19:21:13] 2026-03-01 18:20:08,864 | INFO     | cat /etc/os-release:
[2026-03-01 19:21:13] NAME="CentOS Linux"
[2026-03-01 19:21:13] VERSION="7 (Core)"
[2026-03-01 19:21:13] ID="centos"
[2026-03-01 19:21:13] ID_LIKE="rhel fedora"
[2026-03-01 19:21:13] VERSION_ID="7"
[2026-03-01 19:21:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-01 19:21:13] ANSI_COLOR="0;31"
[2026-03-01 19:21:13] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-01 19:21:13] HOME_URL="https://www.centos.org/"
[2026-03-01 19:21:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-01 19:21:13] 
[2026-03-01 19:21:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-01 19:21:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-01 19:21:13] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-01 19:21:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-01 19:21:13] 
[2026-03-01 19:21:13] 2026-03-01 18:20:08,867 | INFO     | **************************************
[2026-03-01 19:21:13] 2026-03-01 18:20:09,370 | INFO     | executing command: df -mP /var/lib/boinc/var/slot68/slots/0
[2026-03-01 19:21:13] 2026-03-01 18:20:09,386 | INFO     | sufficient remaining disk space (34095497216 B)
[2026-03-01 19:21:13] 2026-03-01 18:20:09,386 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-01 19:21:13] 2026-03-01 18:20:09,386 | INFO     | current server update state: UPDATING_FINAL
[2026-03-01 19:21:13] 2026-03-01 18:20:09,386 | INFO     | update_server=False
[2026-03-01 19:21:13] 2026-03-01 18:20:09,386 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-01 19:21:13] 2026-03-01 18:20:09,386 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-01 19:21:13] 2026-03-01 18:20:09,386 | INFO     | aborting loop
[2026-03-01 19:21:13] 2026-03-01 18:20:09,824 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-01 19:21:13] 2026-03-01 18:20:09,925 | INFO     | all data control threads have been joined
[2026-03-01 19:21:13] 2026-03-01 18:20:10,069 | INFO     | all payload control threads have been joined
[2026-03-01 19:21:13] 2026-03-01 18:20:10,374 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-01 19:21:13] 2026-03-01 18:20:10,392 | INFO     | [job] retrieve thread has finished
[2026-03-01 19:21:13] 2026-03-01 18:20:10,392 | INFO     | [job] job monitor thread has finished
[2026-03-01 19:21:13] 2026-03-01 18:20:10,527 | INFO     | all job control threads have been joined
[2026-03-01 19:21:13] 2026-03-01 18:20:10,707 | INFO     | [payload] execute_payloads thread has finished
[2026-03-01 19:21:13] 2026-03-01 18:20:10,912 | INFO     | [job] validate thread has finished
[2026-03-01 19:21:13] 2026-03-01 18:20:10,930 | INFO     | [data] control thread has finished
[2026-03-01 19:21:13] 2026-03-01 18:20:11,075 | INFO     | [payload] control thread has finished
[2026-03-01 19:21:13] 2026-03-01 18:20:11,082 | INFO     | [payload] validate_pre thread has finished
[2026-03-01 19:21:13] 2026-03-01 18:20:11,161 | INFO     | [payload] validate_post thread has finished
[2026-03-01 19:21:13] 2026-03-01 18:20:11,208 | INFO     | [job] create_data_payload thread has finished
[2026-03-01 19:21:13] 2026-03-01 18:20:11,531 | INFO     | [job] control thread has finished
[2026-03-01 19:21:13] 2026-03-01 18:20:11,537 | INFO     | [data] copytool_in thread has finished
[2026-03-01 19:21:13] 2026-03-01 18:20:11,829 | INFO     | [data] copytool_out thread has finished
[2026-03-01 19:21:13] 2026-03-01 18:20:11,944 | INFO     | [payload] failed_post thread has finished
[2026-03-01 19:21:13] 2026-03-01 18:20:12,071 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-01 19:21:13] 2026-03-01 18:20:13,076 | INFO     | [job] queue monitor thread has finished
[2026-03-01 19:21:13] 2026-03-01 18:20:14,379 | INFO     | [data] queue_monitor thread has finished
[2026-03-01 19:21:13] 2026-03-01 18:20:20,278 | INFO     | job.realtimelogging is not enabled
[2026-03-01 19:21:13] 2026-03-01 18:20:21,283 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-01 19:21:13] 2026-03-01 18:20:39,980 | INFO     | PID=1449733 has CPU usage=6.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-01 19:21:13] 2026-03-01 18:20:39,981 | INFO     | .. there are 49 such processes running
[2026-03-01 19:21:13] 2026-03-01 18:20:39,981 | INFO     | found 0 job(s) in 20 queues
[2026-03-01 19:21:13] 2026-03-01 18:20:39,981 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-01 19:21:13] 2026-03-01 18:20:39,981 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-01 19:21:13] 2026-03-01 18:21:07,670 | INFO     | [monitor] cgroup control has ended
[2026-03-01 19:21:13] 2026-03-01 18:21:07,812 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22953029576512)>', '<ExcThread(monitor, started 22952788895488)>']
[2026-03-01 19:21:13] 2026-03-01 18:21:08,121 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-01 19:21:13] 2026-03-01 18:21:08,122 | INFO     | [monitor] control thread has ended
[2026-03-01 19:21:13] 2026-03-01 18:21:12,836 | INFO     | all workflow threads have been joined
[2026-03-01 19:21:13] 2026-03-01 18:21:12,837 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-01 19:21:13] 2026-03-01 18:21:12,837 | INFO     | traces error code: 0
[2026-03-01 19:21:13] 2026-03-01 18:21:12,837 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-01 19:21:13] 2026-03-01 18:21:12,955 [wrapper] ==== pilot stdout END ====
[2026-03-01 19:21:13] 2026-03-01 18:21:12,957 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-01 19:21:13] 2026-03-01 18:21:12,960 [wrapper] pilotpid: 1449733
[2026-03-01 19:21:13] 2026-03-01 18:21:12,962 [wrapper] Pilot exit status: 0
[2026-03-01 19:21:13] 2026-03-01 18:21:12,972 [wrapper] pandaids: 7034857137
[2026-03-01 19:21:13] 2026-03-01 18:21:13,101 [wrapper] cleanup supervisor_pilot 2025240 1449734
[2026-03-01 19:21:13] 2026-03-01 18:21:13,104 [wrapper] Test setup, not cleaning
[2026-03-01 19:21:13] 2026-03-01 18:21:13,105 [wrapper] apfmon messages muted
[2026-03-01 19:21:13] 2026-03-01 18:21:13,108 [wrapper] ==== wrapper stdout END ====
[2026-03-01 19:21:13] 2026-03-01 18:21:13,110 [wrapper] ==== wrapper stderr END ====
[2026-03-01 19:21:13]  *** Error codes and diagnostics ***
[2026-03-01 19:21:13]     "exeErrorCode": 0,
[2026-03-01 19:21:13]     "exeErrorDiag": "",
[2026-03-01 19:21:13]     "pilotErrorCode": 0,
[2026-03-01 19:21:13]     "pilotErrorDiag": "",
[2026-03-01 19:21:13]  *** Listing of results directory ***
[2026-03-01 19:21:13] total 335908
[2026-03-01 19:21:13] -rw-r--r--. 1 boinc boinc    584627 Mar  1 11:14 pilot3.tar.gz
[2026-03-01 19:21:13] -rwx------. 1 boinc boinc     36322 Mar  1 11:17 runpilot2-wrapper.sh
[2026-03-01 19:21:13] -rw-r--r--. 1 boinc boinc      5111 Mar  1 11:19 queuedata.json
[2026-03-01 19:21:13] -rw-r--r--. 1 boinc boinc       100 Mar  1 18:13 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-01 19:21:13] -rwxr-xr-x. 1 boinc boinc      7986 Mar  1 18:13 run_atlas
[2026-03-01 19:21:13] -rw-r--r--. 1 boinc boinc       105 Mar  1 18:13 job.xml
[2026-03-01 19:21:13] -rw-r--r--. 1 boinc boinc      6702 Mar  1 18:13 init_data.xml
[2026-03-01 19:21:13] -rw-r--r--. 2 boinc boinc 188127162 Mar  1 18:13 EVNT.48700920._000097.pool.root.1
[2026-03-01 19:21:13] -rw-r--r--. 2 boinc boinc     15845 Mar  1 18:13 start_atlas.sh
[2026-03-01 19:21:13] drwxrwx--x. 2 boinc boinc      4096 Mar  1 18:13 shared
[2026-03-01 19:21:13] -rw-r--r--. 2 boinc boinc    597935 Mar  1 18:13 input.tar.gz
[2026-03-01 19:21:13] -rw-r--r--. 1 boinc boinc         0 Mar  1 18:13 boinc_lockfile
[2026-03-01 19:21:13] -rw-r--r--. 1 boinc boinc      2516 Mar  1 18:13 pandaJob.out
[2026-03-01 19:21:13] -rw-------. 1 boinc boinc    998184 Mar  1 18:13 agis_schedconf.cvmfs.json
[2026-03-01 19:21:13] -rw-------. 1 boinc boinc   1513015 Mar  1 18:13 agis_ddmendpoints.agis.ALL.json
[2026-03-01 19:21:13] -rw-------. 1 boinc boinc       444 Mar  1 18:14 workernode_map.json
[2026-03-01 19:21:13] drwx------. 5 boinc boinc      4096 Mar  1 18:14 pilot3
[2026-03-01 19:21:13] -rw-------. 1 boinc boinc 150210731 Mar  1 19:19 HITS.48700922._002436.pool.root.1
[2026-03-01 19:21:13] -rw-------. 1 boinc boinc      1029 Mar  1 19:20 memory_monitor_summary.json
[2026-03-01 19:21:13] -rw-r--r--. 1 boinc boinc       530 Mar  1 19:20 boinc_task_state.xml
[2026-03-01 19:21:13] -rw-------. 1 boinc boinc    257920 Mar  1 19:20 log.48700922._002436.job.log.tgz.1
[2026-03-01 19:21:13] -rw-------. 1 boinc boinc      6341 Mar  1 19:20 heartbeat.json
[2026-03-01 19:21:13] -rw-------. 1 boinc boinc        95 Mar  1 19:20 pilot_heartbeat.json
[2026-03-01 19:21:13] -rw-r--r--. 1 boinc boinc      8192 Mar  1 19:21 boinc_mmap_file
[2026-03-01 19:21:13] -rw-r--r--. 1 boinc boinc        27 Mar  1 19:21 wrapper_checkpoint.txt
[2026-03-01 19:21:13] -rw-------. 1 boinc boinc      4901 Mar  1 19:21 pilotlog.txt
[2026-03-01 19:21:13] -rw-------. 1 boinc boinc    591899 Mar  1 19:21 log.48700922._002436.job.log.1
[2026-03-01 19:21:13] -rw-------. 1 boinc boinc       357 Mar  1 19:21 output.list
[2026-03-01 19:21:13] -rw-r--r--. 1 boinc boinc       620 Mar  1 19:21 runtime_log
[2026-03-01 19:21:13] -rw-------. 1 boinc boinc    870400 Mar  1 19:21 result.tar.gz
[2026-03-01 19:21:13] -rw-r--r--. 1 boinc boinc      9204 Mar  1 19:21 runtime_log.err
[2026-03-01 19:21:13] -rw-------. 1 boinc boinc       662 Mar  1 19:21 k98MDmn2sG9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmAk9KDmx2ZkXn.diag
[2026-03-01 19:21:13] -rw-r--r--. 1 boinc boinc     21284 Mar  1 19:21 stderr.txt
[2026-03-01 19:21:13] HITS file was successfully produced:
[2026-03-01 19:21:13] -rw-------. 1 boinc boinc 150210731 Mar  1 19:19 shared/HITS.pool.root.1
[2026-03-01 19:21:13]  *** Contents of shared directory: ***
[2026-03-01 19:21:13] total 331872
[2026-03-01 19:21:13] -rw-r--r--. 2 boinc boinc 188127162 Mar  1 18:13 ATLAS.root_0
[2026-03-01 19:21:13] -rw-r--r--. 2 boinc boinc     15845 Mar  1 18:13 start_atlas.sh
[2026-03-01 19:21:13] -rw-r--r--. 2 boinc boinc    597935 Mar  1 18:13 input.tar.gz
[2026-03-01 19:21:13] -rw-------. 1 boinc boinc 150210731 Mar  1 19:19 HITS.pool.root.1
[2026-03-01 19:21:13] -rw-------. 1 boinc boinc    870400 Mar  1 19:21 result.tar.gz
19:21:14 (1445200): run_atlas exited; CPU time 15192.436775
19:21:14 (1445200): called boinc_finish(0)

</stderr_txt>
]]>

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