Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
18:55:20 (3292933): wrapper (7.7.26015): starting
18:55:20 (3292933): wrapper: running run_atlas (--nthreads 4)
[2026-03-01 18:55:20] Arguments: --nthreads 4
[2026-03-01 18:55:20] Threads: 4
[2026-03-01 18:55:20] Checking for CVMFS
[2026-03-01 18:55:20] No cvmfs_config command found, will try listing directly
[2026-03-01 18:55:20] CVMFS is ok
[2026-03-01 18:55:20] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-01 18:55:20] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-01 18:55:20] Further information can be found at the LHC@home message board.
[2026-03-01 18:55:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-01 18:55:20] Checking for apptainer binary...
[2026-03-01 18:55:20] which: no apptainer in ((null))
[2026-03-01 18:55:20] apptainer is not installed, using version from CVMFS
[2026-03-01 18:55:20] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-01 18:55:20] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot20/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut04.grid.cesnet.cz
[2026-03-01 18:55:20] apptainer works
[2026-03-01 18:55:20] Set ATHENA_PROC_NUMBER=4
[2026-03-01 18:55:20] Set ATHENA_CORE_NUMBER=4
[2026-03-01 18:55:20] Starting ATLAS job with PandaID=7034564311
[2026-03-01 18:55:20] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot20/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-01 21:27:00]  *** The last 200 lines of the pilot log: ***
[2026-03-01 21:27:00] 2026-03-01 20:26:14,706 | INFO     | preparing for final server update for job 7034564311 in state='finished'
[2026-03-01 21:27:00] 2026-03-01 20:26:14,706 | INFO     | reading metadata from: /scratch/boinc/var/slot20/slots/0/PanDA_Pilot-7034564311/jobReport.json
[2026-03-01 21:27:00] 2026-03-01 20:26:14,709 | INFO     | added worker_node to metadata from /scratch/boinc/var/slot20/slots/0/workernode_map.json
[2026-03-01 21:27:00] 2026-03-01 20:26:14,709 | INFO     | this job has now completed (state=finished)
[2026-03-01 21:27:00] 2026-03-01 20:26:14,709 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-01 21:27:00] 2026-03-01 20:26:14,709 | INFO     | log transfer has been attempted: DONE
[2026-03-01 21:27:00] 2026-03-01 20:26:14,709 | INFO     | job 7034564311 has finished - writing final server update
[2026-03-01 21:27:00] 2026-03-01 20:26:14,710 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_1179916/.job.ad'
[2026-03-01 21:27:00] 2026-03-01 20:26:14,710 | INFO     | total number of processed events: 400 (read)
[2026-03-01 21:27:00] 2026-03-01 20:26:14,722 | INFO     | using path: /scratch/boinc/var/slot20/slots/0/PanDA_Pilot-7034564311/memory_monitor_summary.json (trf name=prmon)
[2026-03-01 21:27:00] 2026-03-01 20:26:14,723 | INFO     | extracted standard info from prmon json
[2026-03-01 21:27:00] 2026-03-01 20:26:14,723 | INFO     | extracted standard memory fields from prmon json
[2026-03-01 21:27:00] 2026-03-01 20:26:14,723 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-01 21:27:00] 2026-03-01 20:26:14,723 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-01 21:27:00] 2026-03-01 20:26:14,723 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-01 21:27:00] 2026-03-01 20:26:14,726 | INFO     | fitting pss+swap vs Time
[2026-03-01 21:27:00] 2026-03-01 20:26:14,727 | INFO     | sum of square deviations: 1005179777.0
[2026-03-01 21:27:00] 2026-03-01 20:26:14,728 | INFO     | sum of deviations: 15838920870.5
[2026-03-01 21:27:00] 2026-03-01 20:26:14,728 | INFO     | mean x: 1772392245.5
[2026-03-01 21:27:00] 2026-03-01 20:26:14,728 | INFO     | mean y: 2287298.2364864866
[2026-03-01 21:27:00] 2026-03-01 20:26:14,728 | INFO     | intersect: -27925831800.763557
[2026-03-01 21:27:00] 2026-03-01 20:26:14,728 | INFO     | chi2: 1.3881421498364335
[2026-03-01 21:27:00] 2026-03-01 20:26:14,729 | INFO     | sum of square deviations: 906703512.0
[2026-03-01 21:27:00] 2026-03-01 20:26:14,729 | INFO     | sum of deviations: 15277812401.000002
[2026-03-01 21:27:00] 2026-03-01 20:26:14,729 | INFO     | mean x: 1772392093.0
[2026-03-01 21:27:00] 2026-03-01 20:26:14,730 | INFO     | mean y: 2286428.965034965
[2026-03-01 21:27:00] 2026-03-01 20:26:14,730 | INFO     | intersect: -29862243198.96228
[2026-03-01 21:27:00] 2026-03-01 20:26:14,730 | INFO     | chi2: 1.3897211647570218
[2026-03-01 21:27:00] 2026-03-01 20:26:14,730 | INFO     | current chi2=1.3897211647570218 (change=-0.11375023233567072 %)
[2026-03-01 21:27:00] 2026-03-01 20:26:14,730 | INFO     | right removable region: 142
[2026-03-01 21:27:00] 2026-03-01 20:26:14,730 | INFO     | sum of square deviations: 906703512.0
[2026-03-01 21:27:00] 2026-03-01 20:26:14,731 | INFO     | sum of deviations: -3263910530.0000005
[2026-03-01 21:27:00] 2026-03-01 20:26:14,731 | INFO     | mean x: 1772392398.0
[2026-03-01 21:27:00] 2026-03-01 20:26:14,731 | INFO     | mean y: 2316375.762237762
[2026-03-01 21:27:00] 2026-03-01 20:26:14,732 | INFO     | intersect: 6382494829.426539
[2026-03-01 21:27:00] 2026-03-01 20:26:14,732 | INFO     | chi2: 0.019333214699455162
[2026-03-01 21:27:00] 2026-03-01 20:26:14,732 | INFO     | current chi2=0.019333214699455162 (change=98.60725973188458 %)
[2026-03-01 21:27:00] 2026-03-01 20:26:14,732 | INFO     | sum of square deviations: 814878534.5
[2026-03-01 21:27:00] 2026-03-01 20:26:14,733 | INFO     | sum of deviations: -1507529721.9999995
[2026-03-01 21:27:00] 2026-03-01 20:26:14,733 | INFO     | mean x: 1772392550.5
[2026-03-01 21:27:00] 2026-03-01 20:26:14,733 | INFO     | mean y: 2313450.695652174
[2026-03-01 21:27:00] 2026-03-01 20:26:14,733 | INFO     | intersect: 3281249311.44894
[2026-03-01 21:27:00] 2026-03-01 20:26:14,734 | INFO     | chi2: 0.014776208309870115
[2026-03-01 21:27:00] 2026-03-01 20:26:14,734 | INFO     | current chi2=0.014776208309870115 (change=23.570867341133237 %)
[2026-03-01 21:27:00] 2026-03-01 20:26:14,734 | INFO     | left removable region: 20
[2026-03-01 21:27:00] 2026-03-01 20:26:14,734 | INFO     | sum of square deviations: 563026370.5
[2026-03-01 21:27:00] 2026-03-01 20:26:14,735 | INFO     | sum of deviations: 1153397180.5000005
[2026-03-01 21:27:00] 2026-03-01 20:26:14,735 | INFO     | mean x: 1772392672.5
[2026-03-01 21:27:00] 2026-03-01 20:26:14,735 | INFO     | mean y: 2308321.8114754097
[2026-03-01 21:27:00] 2026-03-01 20:26:14,735 | INFO     | intersect: -3628556622.1962595
[2026-03-01 21:27:00] 2026-03-01 20:26:14,735 | INFO     | chi2: 0.0003964170067023214
[2026-03-01 21:27:00] 2026-03-01 20:26:14,735 | INFO     | current memory leak: 2.05 B/s (using 122 data points, chi2=0.00)
[2026-03-01 21:27:00] 2026-03-01 20:26:14,736 | INFO     | could have reported an average CPU frequency of 2506 MHz (9 samples)
[2026-03-01 21:27:00] 2026-03-01 20:26:14,736 | INFO     | ..............................
[2026-03-01 21:27:00] 2026-03-01 20:26:14,736 | INFO     | . Timing measurements:
[2026-03-01 21:27:00] 2026-03-01 20:26:14,736 | INFO     | . get job = 0 s
[2026-03-01 21:27:00] 2026-03-01 20:26:14,736 | INFO     | . initial setup = 6 s
[2026-03-01 21:27:00] 2026-03-01 20:26:14,736 | INFO     | . payload setup = 6 s
[2026-03-01 21:27:00] 2026-03-01 20:26:14,736 | INFO     | . stage-in = 0 s
[2026-03-01 21:27:00] 2026-03-01 20:26:14,737 | INFO     | . payload execution = 9012 s
[2026-03-01 21:27:00] 2026-03-01 20:26:14,737 | INFO     | . stage-out = 0 s
[2026-03-01 21:27:00] 2026-03-01 20:26:14,737 | INFO     | . log creation = 0 s
[2026-03-01 21:27:00] 2026-03-01 20:26:14,737 | INFO     | ..............................
[2026-03-01 21:27:00] 2026-03-01 20:26:14,829 | INFO     | 
[2026-03-01 21:27:00] 2026-03-01 20:26:14,829 | INFO     | job summary report
[2026-03-01 21:27:00] 2026-03-01 20:26:14,829 | INFO     | --------------------------------------------------
[2026-03-01 21:27:00] 2026-03-01 20:26:14,829 | INFO     | PanDA job id: 7034564311
[2026-03-01 21:27:00] 2026-03-01 20:26:14,829 | INFO     | task id: 48700930
[2026-03-01 21:27:00] 2026-03-01 20:26:14,829 | INFO     | errors: (none)
[2026-03-01 21:27:00] 2026-03-01 20:26:14,829 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-01 21:27:00] 2026-03-01 20:26:14,829 | INFO     | pilot state: finished 
[2026-03-01 21:27:00] 2026-03-01 20:26:14,829 | INFO     | transexitcode: 0
[2026-03-01 21:27:00] 2026-03-01 20:26:14,829 | INFO     | exeerrorcode: 0
[2026-03-01 21:27:00] 2026-03-01 20:26:14,829 | INFO     | exeerrordiag: 
[2026-03-01 21:27:00] 2026-03-01 20:26:14,829 | INFO     | exitcode: 0
[2026-03-01 21:27:00] 2026-03-01 20:26:14,829 | INFO     | exitmsg: OK
[2026-03-01 21:27:00] 2026-03-01 20:26:14,829 | INFO     | cpuconsumptiontime: 34523 s
[2026-03-01 21:27:00] 2026-03-01 20:26:14,829 | INFO     | nevents: 400
[2026-03-01 21:27:00] 2026-03-01 20:26:14,829 | INFO     | neventsw: 0
[2026-03-01 21:27:00] 2026-03-01 20:26:14,829 | INFO     | pid: 3302586
[2026-03-01 21:27:00] 2026-03-01 20:26:14,830 | INFO     | pgrp: 3302586
[2026-03-01 21:27:00] 2026-03-01 20:26:14,830 | INFO     | corecount: 4
[2026-03-01 21:27:00] 2026-03-01 20:26:14,830 | INFO     | event service: False
[2026-03-01 21:27:00] 2026-03-01 20:26:14,830 | INFO     | sizes: {0: 2281787, 1: 2282248, 11: 2282248, 9023: 2310186, 9024: 2319262, 9025: 2319464}
[2026-03-01 21:27:00] 2026-03-01 20:26:14,830 | INFO     | --------------------------------------------------
[2026-03-01 21:27:00] 2026-03-01 20:26:14,830 | INFO     | 
[2026-03-01 21:27:00] 2026-03-01 20:26:14,830 | INFO     | executing command: ls -lF /scratch/boinc/var/slot20/slots/0
[2026-03-01 21:27:00] 2026-03-01 20:26:14,851 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-01 21:27:00] 2026-03-01 20:26:14,851 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-01 21:27:00] 2026-03-01 20:26:14,851 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-01 21:27:00] 2026-03-01 20:26:14,851 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-01 21:27:00] 2026-03-01 20:26:14,851 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-01 21:27:00] 2026-03-01 20:26:14,851 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-01 21:27:00] 2026-03-01 20:26:14,852 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-01 21:27:00] 2026-03-01 20:26:14,852 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-01 21:27:00] 2026-03-01 20:26:14,852 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-01 21:27:00] 2026-03-01 20:26:14,852 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-01 21:27:00] 2026-03-01 20:26:14,852 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-01 21:27:00] 2026-03-01 20:26:14,852 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-01 21:27:00] 2026-03-01 20:26:14,852 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-01 21:27:00] 2026-03-01 20:26:14,852 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-01 21:27:00] 2026-03-01 20:26:14,852 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-01 21:27:00] 2026-03-01 20:26:14,852 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-01 21:27:00] 2026-03-01 20:26:14,852 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-01 21:27:00] 2026-03-01 20:26:14,853 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-01 21:27:00] 2026-03-01 20:26:14,853 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-01 21:27:00] 2026-03-01 20:26:14,853 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-01 21:27:00] 2026-03-01 20:26:14,853 | INFO     | job 7034564311 has completed (purged errors)
[2026-03-01 21:27:00] 2026-03-01 20:26:14,853 | INFO     | overall cleanup function is called
[2026-03-01 21:27:00] 2026-03-01 20:26:15,860 | INFO     | --- collectZombieJob: --- 10, [3302586]
[2026-03-01 21:27:00] 2026-03-01 20:26:15,861 | INFO     | zombie collector waiting for pid 3302586
[2026-03-01 21:27:00] 2026-03-01 20:26:15,861 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-01 21:27:00] 2026-03-01 20:26:15,861 | INFO     | collected zombie processes
[2026-03-01 21:27:00] 2026-03-01 20:26:15,861 | INFO     | will attempt to kill all subprocesses of pid=3302586
[2026-03-01 21:27:00] 2026-03-01 20:26:15,900 | INFO     | PID=3297805 has CPU usage=15.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-03-01 21:27:00] 2026-03-01 20:26:15,900 | INFO     | .. there are 12 such processes running
[2026-03-01 21:27:00] 2026-03-01 20:26:16,253 | INFO     | process IDs to be killed: [3302586] (in reverse order)
[2026-03-01 21:27:00] 2026-03-01 20:26:16,392 | WARNING  | found no corresponding commands to process id(s)
[2026-03-01 21:27:00] 2026-03-01 20:26:16,392 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-01 21:27:00] 2026-03-01 20:26:16,404 | INFO     | did not find any defunct processes belonging to 3302586
[2026-03-01 21:27:00] 2026-03-01 20:26:16,416 | INFO     | did not find any defunct processes belonging to 3302586
[2026-03-01 21:27:00] 2026-03-01 20:26:16,416 | INFO     | ready for new job
[2026-03-01 21:27:00] 2026-03-01 20:26:16,416 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-01 21:27:00] 2026-03-01 20:26:16,418 | INFO     | **************************************
[2026-03-01 21:27:00] 2026-03-01 20:26:16,419 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-01 21:27:00] 2026-03-01 20:26:16,419 | INFO     | **************************************
[2026-03-01 21:27:00] 2026-03-01 20:26:16,419 | INFO     | 
[2026-03-01 21:27:00] 2026-03-01 20:26:16,423 | INFO     | architecture information:
[2026-03-01 21:27:00] 2026-03-01 20:26:16,423 | INFO     | executing command: cat /etc/os-release
[2026-03-01 21:27:00] 2026-03-01 20:26:16,441 | INFO     | cat /etc/os-release:
[2026-03-01 21:27:00] NAME="CentOS Linux"
[2026-03-01 21:27:00] VERSION="7 (Core)"
[2026-03-01 21:27:00] ID="centos"
[2026-03-01 21:27:00] ID_LIKE="rhel fedora"
[2026-03-01 21:27:00] VERSION_ID="7"
[2026-03-01 21:27:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-01 21:27:00] ANSI_COLOR="0;31"
[2026-03-01 21:27:00] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-01 21:27:00] HOME_URL="https://www.centos.org/"
[2026-03-01 21:27:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-01 21:27:00] 
[2026-03-01 21:27:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-01 21:27:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-01 21:27:00] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-01 21:27:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-01 21:27:00] 
[2026-03-01 21:27:00] 2026-03-01 20:26:16,442 | INFO     | **************************************
[2026-03-01 21:27:00] 2026-03-01 20:26:16,945 | INFO     | executing command: df -mP /scratch/boinc/var/slot20/slots/0
[2026-03-01 21:27:00] 2026-03-01 20:26:16,963 | INFO     | sufficient remaining disk space (675800940544 B)
[2026-03-01 21:27:00] 2026-03-01 20:26:16,964 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-01 21:27:00] 2026-03-01 20:26:16,964 | INFO     | current server update state: UPDATING_FINAL
[2026-03-01 21:27:00] 2026-03-01 20:26:16,964 | INFO     | update_server=False
[2026-03-01 21:27:00] 2026-03-01 20:26:16,964 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-01 21:27:00] 2026-03-01 20:26:16,965 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-01 21:27:00] 2026-03-01 20:26:16,965 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-01 21:27:00] 2026-03-01 20:26:16,966 | INFO     | aborting loop
[2026-03-01 21:27:00] 2026-03-01 20:26:16,989 | INFO     | all payload control threads have been joined
[2026-03-01 21:27:00] 2026-03-01 20:26:17,176 | INFO     | all data control threads have been joined
[2026-03-01 21:27:00] 2026-03-01 20:26:17,613 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-01 21:27:00] 2026-03-01 20:26:17,970 | INFO     | [job] retrieve thread has finished
[2026-03-01 21:27:00] 2026-03-01 20:26:17,970 | INFO     | [job] job monitor thread has finished
[2026-03-01 21:27:00] 2026-03-01 20:26:17,995 | INFO     | [payload] control thread has finished
[2026-03-01 21:27:00] 2026-03-01 20:26:18,181 | INFO     | [data] control thread has finished
[2026-03-01 21:27:00] 2026-03-01 20:26:18,384 | INFO     | all job control threads have been joined
[2026-03-01 21:27:00] 2026-03-01 20:26:18,439 | INFO     | [payload] failed_post thread has finished
[2026-03-01 21:27:00] 2026-03-01 20:26:18,469 | INFO     | [job] validate thread has finished
[2026-03-01 21:27:00] 2026-03-01 20:26:18,745 | INFO     | [payload] execute_payloads thread has finished
[2026-03-01 21:27:00] 2026-03-01 20:26:18,870 | INFO     | [job] create_data_payload thread has finished
[2026-03-01 21:27:00] 2026-03-01 20:26:19,103 | INFO     | [payload] validate_pre thread has finished
[2026-03-01 21:27:00] 2026-03-01 20:26:19,152 | INFO     | [payload] validate_post thread has finished
[2026-03-01 21:27:00] 2026-03-01 20:26:19,211 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-01 21:27:00] 2026-03-01 20:26:19,227 | INFO     | [data] copytool_in thread has finished
[2026-03-01 21:27:00] 2026-03-01 20:26:19,389 | INFO     | [job] control thread has finished
[2026-03-01 21:27:00] 2026-03-01 20:26:19,619 | INFO     | [data] copytool_out thread has finished
[2026-03-01 21:27:00] 2026-03-01 20:26:19,839 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-01 21:27:00] 2026-03-01 20:26:20,845 | INFO     | [job] queue monitor thread has finished
[2026-03-01 21:27:00] 2026-03-01 20:26:20,970 | INFO     | [data] queue_monitor thread has finished
[2026-03-01 21:27:00] 2026-03-01 20:26:48,435 | INFO     | PID=3297805 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-01 21:27:00] 2026-03-01 20:26:48,436 | INFO     | .. there are 12 such processes running
[2026-03-01 21:27:00] 2026-03-01 20:26:48,436 | INFO     | found 0 job(s) in 20 queues
[2026-03-01 21:27:00] 2026-03-01 20:26:48,436 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-01 21:27:00] 2026-03-01 20:26:48,436 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-01 21:27:00] 2026-03-01 20:26:53,468 | INFO     | [monitor] cgroup control has ended
[2026-03-01 21:27:00] 2026-03-01 20:26:55,321 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23335936014144)>', '<ExcThread(monitor, started 23335620552448)>']
[2026-03-01 21:27:00] 2026-03-01 20:26:55,470 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-01 21:27:00] 2026-03-01 20:26:55,471 | INFO     | [monitor] control thread has ended
[2026-03-01 21:27:00] 2026-03-01 20:27:00,346 | INFO     | all workflow threads have been joined
[2026-03-01 21:27:00] 2026-03-01 20:27:00,347 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-01 21:27:00] 2026-03-01 20:27:00,347 | INFO     | traces error code: 0
[2026-03-01 21:27:00] 2026-03-01 20:27:00,347 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-01 21:27:00] 2026-03-01 20:27:00,503 [wrapper] ==== pilot stdout END ====
[2026-03-01 21:27:00] 2026-03-01 20:27:00,506 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-01 21:27:00] 2026-03-01 20:27:00,510 [wrapper] pilotpid: 3297805
[2026-03-01 21:27:00] 2026-03-01 20:27:00,513 [wrapper] Pilot exit status: 0
[2026-03-01 21:27:00] 2026-03-01 20:27:00,524 [wrapper] pandaids: 7034564311
[2026-03-01 21:27:00] 2026-03-01 20:27:00,602 [wrapper] cleanup supervisor_pilot 3471992 3297806
[2026-03-01 21:27:00] 2026-03-01 20:27:00,605 [wrapper] Test setup, not cleaning
[2026-03-01 21:27:00] 2026-03-01 20:27:00,608 [wrapper] apfmon messages muted
[2026-03-01 21:27:00] 2026-03-01 20:27:00,611 [wrapper] ==== wrapper stdout END ====
[2026-03-01 21:27:00] 2026-03-01 20:27:00,613 [wrapper] ==== wrapper stderr END ====
[2026-03-01 21:27:00]  *** Error codes and diagnostics ***
[2026-03-01 21:27:00]     "exeErrorCode": 0,
[2026-03-01 21:27:00]     "exeErrorDiag": "",
[2026-03-01 21:27:00]     "pilotErrorCode": 0,
[2026-03-01 21:27:00]     "pilotErrorDiag": "",
[2026-03-01 21:27:00]  *** Listing of results directory ***
[2026-03-01 21:27:00] total 337416
[2026-03-01 21:27:00] -rw-r--r-- 1 boinc boinc    584627 Mar  1 08:27 pilot3.tar.gz
[2026-03-01 21:27:00] -rw-r--r-- 1 boinc boinc      5111 Mar  1 08:28 queuedata.json
[2026-03-01 21:27:00] -rwx------ 1 boinc boinc     36322 Mar  1 08:28 runpilot2-wrapper.sh
[2026-03-01 21:27:00] -rw-r--r-- 1 boinc boinc       100 Mar  1 18:55 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-01 21:27:00] -rwxr-xr-x 1 boinc boinc      7986 Mar  1 18:55 run_atlas
[2026-03-01 21:27:00] -rw-r--r-- 1 boinc boinc       105 Mar  1 18:55 job.xml
[2026-03-01 21:27:00] -rw-r--r-- 2 boinc boinc 191841185 Mar  1 18:55 EVNT.48700928._000033.pool.root.1
[2026-03-01 21:27:00] -rw-r--r-- 1 boinc boinc      6638 Mar  1 18:55 init_data.xml
[2026-03-01 21:27:00] -rw-r--r-- 2 boinc boinc     15845 Mar  1 18:55 start_atlas.sh
[2026-03-01 21:27:00] drwxrwx--x 2 boinc boinc      4096 Mar  1 18:55 shared
[2026-03-01 21:27:00] -rw-r--r-- 2 boinc boinc    597945 Mar  1 18:55 input.tar.gz
[2026-03-01 21:27:00] -rw-r--r-- 1 boinc boinc         0 Mar  1 18:55 boinc_lockfile
[2026-03-01 21:27:00] -rw-r--r-- 1 boinc boinc      2516 Mar  1 18:55 pandaJob.out
[2026-03-01 21:27:00] -rw------- 1 boinc boinc    998184 Mar  1 18:55 agis_schedconf.cvmfs.json
[2026-03-01 21:27:00] -rw------- 1 boinc boinc   1513015 Mar  1 18:55 agis_ddmendpoints.agis.ALL.json
[2026-03-01 21:27:00] -rw------- 1 boinc boinc       452 Mar  1 18:55 workernode_map.json
[2026-03-01 21:27:00] drwx------ 5 boinc boinc      4096 Mar  1 18:55 pilot3
[2026-03-01 21:27:00] -rw------- 1 boinc boinc 146515020 Mar  1 21:25 HITS.48700930._000817.pool.root.1
[2026-03-01 21:27:00] -rw-r--r-- 1 boinc boinc       529 Mar  1 21:25 boinc_task_state.xml
[2026-03-01 21:27:00] -rw------- 1 boinc boinc        95 Mar  1 21:25 pilot_heartbeat.json
[2026-03-01 21:27:00] -rw------- 1 boinc boinc      1045 Mar  1 21:26 memory_monitor_summary.json
[2026-03-01 21:27:00] -rw------- 1 boinc boinc    325006 Mar  1 21:26 log.48700930._000817.job.log.tgz.1
[2026-03-01 21:27:00] -rw------- 1 boinc boinc      6393 Mar  1 21:26 heartbeat.json
[2026-03-01 21:27:00] -rw-r--r-- 1 boinc boinc      8192 Mar  1 21:26 boinc_mmap_file
[2026-03-01 21:27:00] -rw-r--r-- 1 boinc boinc        27 Mar  1 21:26 wrapper_checkpoint.txt
[2026-03-01 21:27:00] -rw------- 1 boinc boinc      4830 Mar  1 21:27 pilotlog.txt
[2026-03-01 21:27:00] -rw------- 1 boinc boinc   1290055 Mar  1 21:27 log.48700930._000817.job.log.1
[2026-03-01 21:27:00] -rw------- 1 boinc boinc       357 Mar  1 21:27 output.list
[2026-03-01 21:27:00] -rw-r--r-- 1 boinc boinc       620 Mar  1 21:27 runtime_log
[2026-03-01 21:27:00] -rw------- 1 boinc boinc   1628160 Mar  1 21:27 result.tar.gz
[2026-03-01 21:27:00] -rw-r--r-- 1 boinc boinc      9204 Mar  1 21:27 runtime_log.err
[2026-03-01 21:27:00] -rw------- 1 boinc boinc       663 Mar  1 21:27 LO0KDm2OqG9n9Rq4apOajLDm4fhM0noT9bVooX4SDmTR7KDmeBkBrm.diag
[2026-03-01 21:27:00] -rw-r--r-- 1 boinc boinc     21232 Mar  1 21:27 stderr.txt
[2026-03-01 21:27:00] HITS file was successfully produced:
[2026-03-01 21:27:00] -rw------- 1 boinc boinc 146515020 Mar  1 21:25 shared/HITS.pool.root.1
[2026-03-01 21:27:00]  *** Contents of shared directory: ***
[2026-03-01 21:27:00] total 332632
[2026-03-01 21:27:00] -rw-r--r-- 2 boinc boinc 191841185 Mar  1 18:55 ATLAS.root_0
[2026-03-01 21:27:00] -rw-r--r-- 2 boinc boinc     15845 Mar  1 18:55 start_atlas.sh
[2026-03-01 21:27:00] -rw-r--r-- 2 boinc boinc    597945 Mar  1 18:55 input.tar.gz
[2026-03-01 21:27:00] -rw------- 1 boinc boinc 146515020 Mar  1 21:25 HITS.pool.root.1
[2026-03-01 21:27:00] -rw------- 1 boinc boinc   1628160 Mar  1 21:27 result.tar.gz
21:27:02 (3292933): run_atlas exited; CPU time 34886.080947
21:27:02 (3292933): called boinc_finish(0)

</stderr_txt>
]]>

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