Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:12:03 (4125506): wrapper (7.7.26015): starting
05:12:03 (4125506): wrapper: running run_atlas (--nthreads 4)
[2026-03-03 05:12:03] Arguments: --nthreads 4
[2026-03-03 05:12:03] Threads: 4
[2026-03-03 05:12:03] Checking for CVMFS
[2026-03-03 05:12:03] No cvmfs_config command found, will try listing directly
[2026-03-03 05:12:03] CVMFS is ok
[2026-03-03 05:12:03] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-03 05:12:03] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-03 05:12:03] Further information can be found at the LHC@home message board.
[2026-03-03 05:12:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-03 05:12:03] Checking for apptainer binary...
[2026-03-03 05:12:03] which: no apptainer in ((null))
[2026-03-03 05:12:03] apptainer is not installed, using version from CVMFS
[2026-03-03 05:12:03] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-03 05:12:03] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot212/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut19.grid.cesnet.cz
[2026-03-03 05:12:03] apptainer works
[2026-03-03 05:12:03] Set ATHENA_PROC_NUMBER=4
[2026-03-03 05:12:03] Set ATHENA_CORE_NUMBER=4
[2026-03-03 05:12:03] Starting ATLAS job with PandaID=7034442026
[2026-03-03 05:12:03] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot212/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-03 06:49:29]  *** The last 200 lines of the pilot log: ***
[2026-03-03 06:49:29]  direct_access_wan=False
[2026-03-03 06:49:29]  domain=
[2026-03-03 06:49:29]  filesize=293282
[2026-03-03 06:49:29]  filetype=log
[2026-03-03 06:49:29]  guid=c969550e-f98d-407d-812d-9cca13184b22
[2026-03-03 06:49:29]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-03-03 06:49:29]  is_altstaged=None
[2026-03-03 06:49:29]  is_tar=False
[2026-03-03 06:49:29]  lfn=log.48838577._002238.job.log.tgz.1
[2026-03-03 06:49:29]  mtime=0
[2026-03-03 06:49:29]  protocol_id=None
[2026-03-03 06:49:29]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-03 06:49:29]  replicas=None
[2026-03-03 06:49:29]  scope=mc23_13p6TeV
[2026-03-03 06:49:29]  status=None
[2026-03-03 06:49:29]  status_code=0
[2026-03-03 06:49:29]  storage_token=
[2026-03-03 06:49:29]  surl=/var/lib/boinc/var/slot212/slots/0/PanDA_Pilot-7034442026/log.48838577._002238.job.log.tgz.1
[2026-03-03 06:49:29]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/03/04/log.48838577._002238.job.log.tgz.1
[2026-03-03 06:49:29]  workdir=None
[2026-03-03 06:49:29] ]
[2026-03-03 06:49:29] 2026-03-03 05:48:53,498 | INFO     | transferring file log.48838577._002238.job.log.tgz.1 from /var/lib/boinc/var/slot212/slots/0/PanDA_Pilot-7034442026/log.48838577._002238.job.log.tgz.1 to /var/lib/
[2026-03-03 06:49:29] 2026-03-03 05:48:53,499 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot212/slots/0/PanDA_Pilot-7034442026/log.48838577._002238.job.log.tgz.1 /var/lib/boinc/var/slot212/slots/0/
[2026-03-03 06:49:29] 2026-03-03 05:48:53,513 | INFO     | adding to output.list: log.48838577._002238.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/03/04/log.48838577._002238.job.log.tg
[2026-03-03 06:49:29] 2026-03-03 05:48:53,513 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-03 06:49:29] 2026-03-03 05:48:53,513 | INFO     | summary of transferred files:
[2026-03-03 06:49:29] 2026-03-03 05:48:53,513 | INFO     |  -- lfn=log.48838577._002238.job.log.tgz.1, status_code=0, status=transferred
[2026-03-03 06:49:29] 2026-03-03 05:48:53,513 | INFO     | stage-out finished correctly
[2026-03-03 06:49:29] 2026-03-03 05:48:53,562 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-03 06:49:29] 2026-03-03 05:48:53,668 | INFO     | job 7034442026 has state=finished
[2026-03-03 06:49:29] 2026-03-03 05:48:53,668 | INFO     | preparing for final server update for job 7034442026 in state='finished'
[2026-03-03 06:49:29] 2026-03-03 05:48:53,668 | INFO     | reading metadata from: /var/lib/boinc/var/slot212/slots/0/PanDA_Pilot-7034442026/jobReport.json
[2026-03-03 06:49:29] 2026-03-03 05:48:53,670 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot212/slots/0/workernode_map.json
[2026-03-03 06:49:29] 2026-03-03 05:48:53,670 | INFO     | this job has now completed (state=finished)
[2026-03-03 06:49:29] 2026-03-03 05:48:53,670 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-03 06:49:29] 2026-03-03 05:48:53,670 | INFO     | log transfer has been attempted: DONE
[2026-03-03 06:49:29] 2026-03-03 05:48:53,670 | INFO     | job 7034442026 has finished - writing final server update
[2026-03-03 06:49:29] 2026-03-03 05:48:53,671 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_204629/.job.ad'
[2026-03-03 06:49:29] 2026-03-03 05:48:53,671 | INFO     | total number of processed events: 400 (read)
[2026-03-03 06:49:29] 2026-03-03 05:48:53,688 | INFO     | using path: /var/lib/boinc/var/slot212/slots/0/PanDA_Pilot-7034442026/memory_monitor_summary.json (trf name=prmon)
[2026-03-03 06:49:29] 2026-03-03 05:48:53,688 | INFO     | extracted standard info from prmon json
[2026-03-03 06:49:29] 2026-03-03 05:48:53,689 | INFO     | extracted standard memory fields from prmon json
[2026-03-03 06:49:29] 2026-03-03 05:48:53,689 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-03 06:49:29] 2026-03-03 05:48:53,689 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-03 06:49:29] 2026-03-03 05:48:53,689 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-03 06:49:29] 2026-03-03 05:48:53,690 | INFO     | fitting pss+swap vs Time
[2026-03-03 06:49:29] 2026-03-03 05:48:53,690 | INFO     | sum of square deviations: 211285822.0
[2026-03-03 06:49:29] 2026-03-03 05:48:53,691 | INFO     | sum of deviations: 415732934.00000006
[2026-03-03 06:49:29] 2026-03-03 05:48:53,691 | INFO     | mean x: 1772514113.5
[2026-03-03 06:49:29] 2026-03-03 05:48:53,691 | INFO     | mean y: 2363803.227272727
[2026-03-03 06:49:29] 2026-03-03 05:48:53,691 | INFO     | intersect: -3485293276.5826735
[2026-03-03 06:49:29] 2026-03-03 05:48:53,691 | INFO     | chi2: 0.00019948819963075943
[2026-03-03 06:49:29] 2026-03-03 05:48:53,691 | INFO     | current memory leak: 1.97 B/s (using 88 data points, chi2=0.00)
[2026-03-03 06:49:29] 2026-03-03 05:48:53,691 | INFO     | could have reported an average CPU frequency of 3583 MHz (7 samples)
[2026-03-03 06:49:29] 2026-03-03 05:48:53,691 | INFO     | ..............................
[2026-03-03 06:49:29] 2026-03-03 05:48:53,691 | INFO     | . Timing measurements:
[2026-03-03 06:49:29] 2026-03-03 05:48:53,691 | INFO     | . get job = 0 s
[2026-03-03 06:49:29] 2026-03-03 05:48:53,691 | INFO     | . initial setup = 4 s
[2026-03-03 06:49:29] 2026-03-03 05:48:53,691 | INFO     | . payload setup = 4 s
[2026-03-03 06:49:29] 2026-03-03 05:48:53,691 | INFO     | . stage-in = 0 s
[2026-03-03 06:49:29] 2026-03-03 05:48:53,691 | INFO     | . payload execution = 5776 s
[2026-03-03 06:49:29] 2026-03-03 05:48:53,691 | INFO     | . stage-out = 0 s
[2026-03-03 06:49:29] 2026-03-03 05:48:53,691 | INFO     | . log creation = 0 s
[2026-03-03 06:49:29] 2026-03-03 05:48:53,691 | INFO     | ..............................
[2026-03-03 06:49:29] 2026-03-03 05:48:53,922 | INFO     | 
[2026-03-03 06:49:29] 2026-03-03 05:48:53,923 | INFO     | job summary report
[2026-03-03 06:49:29] 2026-03-03 05:48:53,923 | INFO     | --------------------------------------------------
[2026-03-03 06:49:29] 2026-03-03 05:48:53,923 | INFO     | PanDA job id: 7034442026
[2026-03-03 06:49:29] 2026-03-03 05:48:53,923 | INFO     | task id: 48838577
[2026-03-03 06:49:29] 2026-03-03 05:48:53,923 | INFO     | errors: (none)
[2026-03-03 06:49:29] 2026-03-03 05:48:53,923 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-03 06:49:29] 2026-03-03 05:48:53,923 | INFO     | pilot state: finished 
[2026-03-03 06:49:29] 2026-03-03 05:48:53,923 | INFO     | transexitcode: 0
[2026-03-03 06:49:29] 2026-03-03 05:48:53,923 | INFO     | exeerrorcode: 0
[2026-03-03 06:49:29] 2026-03-03 05:48:53,923 | INFO     | exeerrordiag: 
[2026-03-03 06:49:29] 2026-03-03 05:48:53,923 | INFO     | exitcode: 0
[2026-03-03 06:49:29] 2026-03-03 05:48:53,923 | INFO     | exitmsg: OK
[2026-03-03 06:49:29] 2026-03-03 05:48:53,923 | INFO     | cpuconsumptiontime: 22306 s
[2026-03-03 06:49:29] 2026-03-03 05:48:53,923 | INFO     | nevents: 400
[2026-03-03 06:49:29] 2026-03-03 05:48:53,923 | INFO     | neventsw: 0
[2026-03-03 06:49:29] 2026-03-03 05:48:53,923 | INFO     | pid: 4145976
[2026-03-03 06:49:29] 2026-03-03 05:48:53,923 | INFO     | pgrp: 4145976
[2026-03-03 06:49:29] 2026-03-03 05:48:53,923 | INFO     | corecount: 4
[2026-03-03 06:49:29] 2026-03-03 05:48:53,923 | INFO     | event service: False
[2026-03-03 06:49:29] 2026-03-03 05:48:53,923 | INFO     | sizes: {0: 2282239, 11: 2282239, 5785: 2308914, 5787: 2318130}
[2026-03-03 06:49:29] 2026-03-03 05:48:53,923 | INFO     | --------------------------------------------------
[2026-03-03 06:49:29] 2026-03-03 05:48:53,923 | INFO     | 
[2026-03-03 06:49:29] 2026-03-03 05:48:53,923 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot212/slots/0
[2026-03-03 06:49:29] 2026-03-03 05:48:53,941 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-03 06:49:29] 2026-03-03 05:48:53,941 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-03 06:49:29] 2026-03-03 05:48:53,941 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-03 06:49:29] 2026-03-03 05:48:53,941 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-03 06:49:29] 2026-03-03 05:48:53,941 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-03 06:49:29] 2026-03-03 05:48:53,941 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-03 06:49:29] 2026-03-03 05:48:53,941 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-03 06:49:29] 2026-03-03 05:48:53,941 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-03 06:49:29] 2026-03-03 05:48:53,941 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-03 06:49:29] 2026-03-03 05:48:53,941 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-03 06:49:29] 2026-03-03 05:48:53,941 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-03 06:49:29] 2026-03-03 05:48:53,941 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-03 06:49:29] 2026-03-03 05:48:53,941 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-03 06:49:29] 2026-03-03 05:48:53,941 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-03 06:49:29] 2026-03-03 05:48:53,941 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-03 06:49:29] 2026-03-03 05:48:53,941 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-03 06:49:29] 2026-03-03 05:48:53,941 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-03 06:49:29] 2026-03-03 05:48:53,941 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-03 06:49:29] 2026-03-03 05:48:53,941 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-03 06:49:29] 2026-03-03 05:48:53,941 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-03 06:49:29] 2026-03-03 05:48:53,941 | INFO     | job 7034442026 has completed (purged errors)
[2026-03-03 06:49:29] 2026-03-03 05:48:53,942 | INFO     | overall cleanup function is called
[2026-03-03 06:49:29] 2026-03-03 05:48:54,948 | INFO     | --- collectZombieJob: --- 10, [4145976]
[2026-03-03 06:49:29] 2026-03-03 05:48:54,948 | INFO     | zombie collector waiting for pid 4145976
[2026-03-03 06:49:29] 2026-03-03 05:48:54,948 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-03 06:49:29] 2026-03-03 05:48:54,948 | INFO     | collected zombie processes
[2026-03-03 06:49:29] 2026-03-03 05:48:54,948 | INFO     | will attempt to kill all subprocesses of pid=4145976
[2026-03-03 06:49:29] 2026-03-03 05:48:55,343 | INFO     | process IDs to be killed: [4145976] (in reverse order)
[2026-03-03 06:49:29] 2026-03-03 05:48:55,538 | WARNING  | found no corresponding commands to process id(s)
[2026-03-03 06:49:29] 2026-03-03 05:48:55,538 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-03 06:49:29] 2026-03-03 05:48:55,564 | INFO     | did not find any defunct processes belonging to 4145976
[2026-03-03 06:49:29] 2026-03-03 05:48:55,588 | INFO     | did not find any defunct processes belonging to 4145976
[2026-03-03 06:49:29] 2026-03-03 05:48:55,589 | INFO     | ready for new job
[2026-03-03 06:49:29] 2026-03-03 05:48:55,589 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-03 06:49:29] 2026-03-03 05:48:55,590 | INFO     | **************************************
[2026-03-03 06:49:29] 2026-03-03 05:48:55,590 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-03 06:49:29] 2026-03-03 05:48:55,590 | INFO     | **************************************
[2026-03-03 06:49:29] 2026-03-03 05:48:55,590 | INFO     | 
[2026-03-03 06:49:29] 2026-03-03 05:48:55,596 | INFO     | architecture information:
[2026-03-03 06:49:29] 2026-03-03 05:48:55,596 | INFO     | executing command: cat /etc/os-release
[2026-03-03 06:49:29] 2026-03-03 05:48:55,610 | INFO     | cat /etc/os-release:
[2026-03-03 06:49:29] NAME="CentOS Linux"
[2026-03-03 06:49:29] VERSION="7 (Core)"
[2026-03-03 06:49:29] ID="centos"
[2026-03-03 06:49:29] ID_LIKE="rhel fedora"
[2026-03-03 06:49:29] VERSION_ID="7"
[2026-03-03 06:49:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-03 06:49:29] ANSI_COLOR="0;31"
[2026-03-03 06:49:29] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-03 06:49:29] HOME_URL="https://www.centos.org/"
[2026-03-03 06:49:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-03 06:49:29] 
[2026-03-03 06:49:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-03 06:49:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-03 06:49:29] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-03 06:49:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-03 06:49:29] 
[2026-03-03 06:49:29] 2026-03-03 05:48:55,611 | INFO     | **************************************
[2026-03-03 06:49:29] 2026-03-03 05:48:56,114 | INFO     | executing command: df -mP /var/lib/boinc/var/slot212/slots/0
[2026-03-03 06:49:29] 2026-03-03 05:48:56,127 | INFO     | sufficient remaining disk space (20862468096 B)
[2026-03-03 06:49:29] 2026-03-03 05:48:56,128 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-03 06:49:29] 2026-03-03 05:48:56,128 | INFO     | current server update state: UPDATING_FINAL
[2026-03-03 06:49:29] 2026-03-03 05:48:56,128 | INFO     | update_server=False
[2026-03-03 06:49:29] 2026-03-03 05:48:56,128 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-03 06:49:29] 2026-03-03 05:48:56,128 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-03 06:49:29] 2026-03-03 05:48:56,128 | INFO     | aborting loop
[2026-03-03 06:49:29] 2026-03-03 05:48:56,567 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-03 06:49:29] 2026-03-03 05:48:56,828 | INFO     | all data control threads have been joined
[2026-03-03 06:49:29] 2026-03-03 05:48:56,847 | INFO     | all job control threads have been joined
[2026-03-03 06:49:29] 2026-03-03 05:48:57,133 | INFO     | [job] retrieve thread has finished
[2026-03-03 06:49:29] 2026-03-03 05:48:57,134 | INFO     | [job] job monitor thread has finished
[2026-03-03 06:49:29] 2026-03-03 05:48:57,205 | INFO     | all payload control threads have been joined
[2026-03-03 06:49:29] 2026-03-03 05:48:57,296 | INFO     | [payload] validate_post thread has finished
[2026-03-03 06:49:29] 2026-03-03 05:48:57,829 | INFO     | [data] control thread has finished
[2026-03-03 06:49:29] 2026-03-03 05:48:57,852 | INFO     | [job] control thread has finished
[2026-03-03 06:49:29] 2026-03-03 05:48:57,895 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-03 06:49:29] 2026-03-03 05:48:57,926 | INFO     | [payload] failed_post thread has finished
[2026-03-03 06:49:29] 2026-03-03 05:48:57,973 | INFO     | [job] validate thread has finished
[2026-03-03 06:49:29] 2026-03-03 05:48:58,088 | INFO     | [job] create_data_payload thread has finished
[2026-03-03 06:49:29] 2026-03-03 05:48:58,141 | INFO     | [payload] validate_pre thread has finished
[2026-03-03 06:49:29] 2026-03-03 05:48:58,210 | INFO     | [payload] control thread has finished
[2026-03-03 06:49:29] 2026-03-03 05:48:58,431 | INFO     | [data] copytool_in thread has finished
[2026-03-03 06:49:29] 2026-03-03 05:48:58,463 | INFO     | [payload] execute_payloads thread has finished
[2026-03-03 06:49:29] 2026-03-03 05:48:58,573 | INFO     | [data] copytool_out thread has finished
[2026-03-03 06:49:29] 2026-03-03 05:48:58,750 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-03 06:49:29] 2026-03-03 05:48:59,621 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-03 06:49:29] 2026-03-03 05:48:59,755 | INFO     | [job] queue monitor thread has finished
[2026-03-03 06:49:29] 2026-03-03 05:49:03,626 | INFO     | [data] queue_monitor thread has finished
[2026-03-03 06:49:29] 2026-03-03 05:49:23,910 | INFO     | [monitor] cgroup control has ended
[2026-03-03 06:49:29] 2026-03-03 05:49:24,241 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23070757214016)>', '<ExcThread(monitor, started 23070512514816)>']
[2026-03-03 06:49:29] 2026-03-03 05:49:24,376 | INFO     | 5803s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2026-03-03 06:49:29] 2026-03-03 05:49:25,880 | INFO     | PID=4133958 has CPU usage=7.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-03 06:49:29] 2026-03-03 05:49:25,880 | INFO     | .. there are 46 such processes running
[2026-03-03 06:49:29] 2026-03-03 05:49:25,881 | INFO     | found 0 job(s) in 20 queues
[2026-03-03 06:49:29] 2026-03-03 05:49:25,881 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-03 06:49:29] 2026-03-03 05:49:25,881 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-03 06:49:29] 2026-03-03 05:49:25,881 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-03 06:49:29] 2026-03-03 05:49:25,881 | INFO     | [monitor] control thread has ended
[2026-03-03 06:49:29] 2026-03-03 05:49:29,266 | INFO     | all workflow threads have been joined
[2026-03-03 06:49:29] 2026-03-03 05:49:29,266 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-03 06:49:29] 2026-03-03 05:49:29,266 | INFO     | traces error code: 0
[2026-03-03 06:49:29] 2026-03-03 05:49:29,266 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-03 06:49:29] 2026-03-03 05:49:29,456 [wrapper] ==== pilot stdout END ====
[2026-03-03 06:49:29] 2026-03-03 05:49:29,458 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-03 06:49:29] 2026-03-03 05:49:29,460 [wrapper] pilotpid: 4133958
[2026-03-03 06:49:29] 2026-03-03 05:49:29,462 [wrapper] Pilot exit status: 0
[2026-03-03 06:49:29] 2026-03-03 05:49:29,470 [wrapper] pandaids: 7034442026
[2026-03-03 06:49:29] 2026-03-03 05:49:29,582 [wrapper] cleanup supervisor_pilot  726537 4133959
[2026-03-03 06:49:29] 2026-03-03 05:49:29,585 [wrapper] Test setup, not cleaning
[2026-03-03 06:49:29] 2026-03-03 05:49:29,587 [wrapper] apfmon messages muted
[2026-03-03 06:49:29] 2026-03-03 05:49:29,589 [wrapper] ==== wrapper stdout END ====
[2026-03-03 06:49:29] 2026-03-03 05:49:29,591 [wrapper] ==== wrapper stderr END ====
[2026-03-03 06:49:29]  *** Error codes and diagnostics ***
[2026-03-03 06:49:29]     "exeErrorCode": 0,
[2026-03-03 06:49:29]     "exeErrorDiag": "",
[2026-03-03 06:49:29]     "pilotErrorCode": 0,
[2026-03-03 06:49:29]     "pilotErrorDiag": "",
[2026-03-03 06:49:29]  *** Listing of results directory ***
[2026-03-03 06:49:29] total 517320
[2026-03-03 06:49:29] -rw-r--r--. 1 boinc boinc    584627 Mar  1 06:54 pilot3.tar.gz
[2026-03-03 06:49:29] -rwx------. 1 boinc boinc     36322 Mar  1 06:57 runpilot2-wrapper.sh
[2026-03-03 06:49:29] -rw-r--r--. 1 boinc boinc      5111 Mar  1 06:59 queuedata.json
[2026-03-03 06:49:29] -rw-r--r--. 1 boinc boinc       100 Mar  3 05:11 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-03 06:49:29] -rwxr-xr-x. 1 boinc boinc      7986 Mar  3 05:11 run_atlas
[2026-03-03 06:49:29] -rw-r--r--. 1 boinc boinc       105 Mar  3 05:11 job.xml
[2026-03-03 06:49:29] -rw-r--r--. 2 boinc boinc 290572469 Mar  3 05:12 EVNT.48220197._000064.pool.root.1
[2026-03-03 06:49:29] -rw-r--r--. 2 boinc boinc     15845 Mar  3 05:12 start_atlas.sh
[2026-03-03 06:49:29] drwxrwx--x. 2 boinc boinc      4096 Mar  3 05:12 shared
[2026-03-03 06:49:29] -rw-r--r--. 2 boinc boinc    597976 Mar  3 05:12 input.tar.gz
[2026-03-03 06:49:29] -rw-r--r--. 1 boinc boinc      6708 Mar  3 05:12 init_data.xml
[2026-03-03 06:49:29] -rw-r--r--. 1 boinc boinc         0 Mar  3 05:12 boinc_lockfile
[2026-03-03 06:49:29] -rw-r--r--. 1 boinc boinc      2566 Mar  3 05:12 pandaJob.out
[2026-03-03 06:49:29] -rw-------. 1 boinc boinc    997730 Mar  3 05:12 agis_schedconf.cvmfs.json
[2026-03-03 06:49:29] -rw-------. 1 boinc boinc   1512931 Mar  3 05:12 agis_ddmendpoints.agis.ALL.json
[2026-03-03 06:49:29] -rw-------. 1 boinc boinc       444 Mar  3 05:12 workernode_map.json
[2026-03-03 06:49:29] drwx------. 5 boinc boinc      4096 Mar  3 05:12 pilot3
[2026-03-03 06:49:29] -rw-------. 1 boinc boinc 232959677 Mar  3 06:48 HITS.48838577._002238.pool.root.1
[2026-03-03 06:49:29] -rw-r--r--. 1 boinc boinc       529 Mar  3 06:48 boinc_task_state.xml
[2026-03-03 06:49:29] -rw-------. 1 boinc boinc      1030 Mar  3 06:48 memory_monitor_summary.json
[2026-03-03 06:49:29] -rw-------. 1 boinc boinc    293282 Mar  3 06:48 log.48838577._002238.job.log.tgz.1
[2026-03-03 06:49:29] -rw-------. 1 boinc boinc      6354 Mar  3 06:48 heartbeat.json
[2026-03-03 06:49:29] -rw-r--r--. 1 boinc boinc      8192 Mar  3 06:49 boinc_mmap_file
[2026-03-03 06:49:29] -rw-r--r--. 1 boinc boinc        27 Mar  3 06:49 wrapper_checkpoint.txt
[2026-03-03 06:49:29] -rw-------. 1 boinc boinc        95 Mar  3 06:49 pilot_heartbeat.json
[2026-03-03 06:49:29] -rw-------. 1 boinc boinc      4945 Mar  3 06:49 pilotlog.txt
[2026-03-03 06:49:29] -rw-------. 1 boinc boinc    843826 Mar  3 06:49 log.48838577._002238.job.log.1
[2026-03-03 06:49:29] -rw-------. 1 boinc boinc       357 Mar  3 06:49 output.list
[2026-03-03 06:49:29] -rw-r--r--. 1 boinc boinc       620 Mar  3 06:49 runtime_log
[2026-03-03 06:49:29] -rw-------. 1 boinc boinc   1157120 Mar  3 06:49 result.tar.gz
[2026-03-03 06:49:29] -rw-r--r--. 1 boinc boinc      9221 Mar  3 06:49 runtime_log.err
[2026-03-03 06:49:29] -rw-------. 1 boinc boinc       662 Mar  3 06:49 rmQMDmUzoG9n9Rq4apOajLDm4fhM0noT9bVooX4SDm6M7KDmWVp7tm.diag
[2026-03-03 06:49:29] -rw-r--r--. 1 boinc boinc     20275 Mar  3 06:49 stderr.txt
[2026-03-03 06:49:29] HITS file was successfully produced:
[2026-03-03 06:49:29] -rw-------. 1 boinc boinc 232959677 Mar  3 06:48 shared/HITS.pool.root.1
[2026-03-03 06:49:29]  *** Contents of shared directory: ***
[2026-03-03 06:49:29] total 513004
[2026-03-03 06:49:29] -rw-r--r--. 2 boinc boinc 290572469 Mar  3 05:12 ATLAS.root_0
[2026-03-03 06:49:29] -rw-r--r--. 2 boinc boinc     15845 Mar  3 05:12 start_atlas.sh
[2026-03-03 06:49:29] -rw-r--r--. 2 boinc boinc    597976 Mar  3 05:12 input.tar.gz
[2026-03-03 06:49:29] -rw-------. 1 boinc boinc 232959677 Mar  3 06:48 HITS.pool.root.1
[2026-03-03 06:49:29] -rw-------. 1 boinc boinc   1157120 Mar  3 06:49 result.tar.gz
06:49:31 (4125506): run_atlas exited; CPU time 22562.235586
06:49:31 (4125506): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN