Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
04:46:19 (2908): wrapper (7.7.26015): starting
04:46:19 (2908): wrapper: running run_atlas (--nthreads 8)
[2026-03-01 04:46:19] Arguments: --nthreads 8
[2026-03-01 04:46:19] Threads: 8
[2026-03-01 04:46:19] Checking for CVMFS
[2026-03-01 04:46:19] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-01 04:46:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-01 04:46:20] Running cvmfs_config stat atlas.cern.ch
[2026-03-01 04:46:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-01 04:46:20] 2.11.2.0 3869 240032 155344 156764 0 52 13131575 18432000 1833 130560 0 159223068 99.988 8379993 29454 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-03-01 04:46:20] CVMFS is ok
[2026-03-01 04:46:20] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-01 04:46:20] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-01 04:46:20] Further information can be found at the LHC@home message board.
[2026-03-01 04:46:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-01 04:46:20] Checking for apptainer binary...
[2026-03-01 04:46:20] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-01 04:46:20] Running /usr/bin/apptainer --version
[2026-03-01 04:46:20] apptainer version 1.3.2-1.el7
[2026-03-01 04:46:20] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-01 04:46:21] c-206-12.aglt2.org
[2026-03-01 04:46:21] apptainer works
[2026-03-01 04:46:21] Set ATHENA_PROC_NUMBER=8
[2026-03-01 04:46:21] Set ATHENA_CORE_NUMBER=8
[2026-03-01 04:46:21] Starting ATLAS job with PandaID=7034261689
[2026-03-01 04:46:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
06:40:05 (6371): wrapper (7.7.26015): starting
06:40:05 (6371): wrapper: running run_atlas (--nthreads 8)
[2026-03-01 06:40:05] Arguments: --nthreads 8
[2026-03-01 06:40:05] Threads: 8
[2026-03-01 06:40:05] This job has been restarted, cleaning up previous attempt
[2026-03-01 06:40:05] Checking for CVMFS
[2026-03-01 06:40:06] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-01 06:40:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-01 06:40:06] Running cvmfs_config stat atlas.cern.ch
[2026-03-01 06:40:06] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-01 06:40:06] 2.11.2.0 3869 240145 155468 156768 3 188 13165054 18432000 1 130560 0 159376495 99.988 8385631 29454 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-03-01 06:40:06] CVMFS is ok
[2026-03-01 06:40:06] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-01 06:40:06] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-01 06:40:06] Further information can be found at the LHC@home message board.
[2026-03-01 06:40:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-01 06:40:06] Checking for apptainer binary...
[2026-03-01 06:40:06] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-01 06:40:06] Running /usr/bin/apptainer --version
[2026-03-01 06:40:06] apptainer version 1.3.2-1.el7
[2026-03-01 06:40:06] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-01 06:40:07] c-206-12.aglt2.org
[2026-03-01 06:40:07] apptainer works
[2026-03-01 06:40:07] Set ATHENA_PROC_NUMBER=8
[2026-03-01 06:40:07] Set ATHENA_CORE_NUMBER=8
[2026-03-01 06:40:07] Starting ATLAS job with PandaID=7034261689
[2026-03-01 06:40:07] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-01 09:20:41]  *** The last 200 lines of the pilot log: ***
[2026-03-01 09:20:41] 2026-03-01 14:20:08,599 | INFO     | monitor loop #707: job 0:7034261689 is in state 'finished'
[2026-03-01 09:20:41] 2026-03-01 14:20:08,599 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-01 09:20:41] 2026-03-01 14:20:10,292 | INFO     | time since job start (9591s) is within the limit (349056.0s)
[2026-03-01 09:20:41] 2026-03-01 14:20:10,325 | INFO     | job 7034261689 has state=finished
[2026-03-01 09:20:41] 2026-03-01 14:20:10,325 | INFO     | preparing for final server update for job 7034261689 in state='finished'
[2026-03-01 09:20:41] 2026-03-01 14:20:10,325 | INFO     | reading metadata from: /tmp/boinchome/slots/0/PanDA_Pilot-7034261689/jobReport.json
[2026-03-01 09:20:41] 2026-03-01 14:20:10,328 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/0/workernode_map.json
[2026-03-01 09:20:41] 2026-03-01 14:20:10,329 | INFO     | this job has now completed (state=finished)
[2026-03-01 09:20:41] 2026-03-01 14:20:10,329 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-01 09:20:41] 2026-03-01 14:20:10,329 | INFO     | log transfer has been attempted: DONE
[2026-03-01 09:20:41] 2026-03-01 14:20:10,329 | INFO     | job 7034261689 has finished - writing final server update
[2026-03-01 09:20:41] 2026-03-01 14:20:10,330 | INFO     | total number of processed events: 400 (read)
[2026-03-01 09:20:41] 2026-03-01 14:20:10,334 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7034261689/memory_monitor_summary.json (trf name=prmon)
[2026-03-01 09:20:41] 2026-03-01 14:20:10,335 | INFO     | extracted standard info from prmon json
[2026-03-01 09:20:41] 2026-03-01 14:20:10,335 | INFO     | extracted standard memory fields from prmon json
[2026-03-01 09:20:41] 2026-03-01 14:20:10,335 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-01 09:20:41] 2026-03-01 14:20:10,336 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-01 09:20:41] 2026-03-01 14:20:10,336 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-01 09:20:41] 2026-03-01 14:20:10,340 | INFO     | fitting pss+swap vs Time
[2026-03-01 09:20:41] 2026-03-01 14:20:10,341 | INFO     | sum of square deviations: 1199940638.0
[2026-03-01 09:20:41] 2026-03-01 14:20:10,342 | INFO     | sum of deviations: 19637052900.000004
[2026-03-01 09:20:41] 2026-03-01 14:20:10,342 | INFO     | mean x: 1772369999.0
[2026-03-01 09:20:41] 2026-03-01 14:20:10,342 | INFO     | mean y: 2494970.719745223
[2026-03-01 09:20:41] 2026-03-01 14:20:10,343 | INFO     | intersect: -29002376042.521122
[2026-03-01 09:20:41] 2026-03-01 14:20:10,343 | INFO     | chi2: 1.2672391178050662
[2026-03-01 09:20:41] 2026-03-01 14:20:10,343 | INFO     | sum of square deviations: 1088905998.0
[2026-03-01 09:20:41] 2026-03-01 14:20:10,345 | INFO     | sum of deviations: 18767691513.999996
[2026-03-01 09:20:41] 2026-03-01 14:20:10,345 | INFO     | mean x: 1772369846.5
[2026-03-01 09:20:41] 2026-03-01 14:20:10,345 | INFO     | mean y: 2493780.3815789474
[2026-03-01 09:20:41] 2026-03-01 14:20:10,345 | INFO     | intersect: -30544946117.022243
[2026-03-01 09:20:41] 2026-03-01 14:20:10,346 | INFO     | chi2: 1.2683674434262349
[2026-03-01 09:20:41] 2026-03-01 14:20:10,346 | INFO     | current chi2=1.2683674434262349 (change=-0.08903809907028758 %)
[2026-03-01 09:20:41] 2026-03-01 14:20:10,346 | INFO     | right removable region: 151
[2026-03-01 09:20:41] 2026-03-01 14:20:10,346 | INFO     | sum of square deviations: 1088905998.0
[2026-03-01 09:20:41] 2026-03-01 14:20:10,347 | INFO     | sum of deviations: -1472892275.0
[2026-03-01 09:20:41] 2026-03-01 14:20:10,348 | INFO     | mean x: 1772370151.5
[2026-03-01 09:20:41] 2026-03-01 14:20:10,348 | INFO     | mean y: 2523500.0
[2026-03-01 09:20:41] 2026-03-01 14:20:10,348 | INFO     | intersect: 2399893254.0280514
[2026-03-01 09:20:41] 2026-03-01 14:20:10,348 | INFO     | chi2: 0.011963880157193903
[2026-03-01 09:20:41] 2026-03-01 14:20:10,349 | INFO     | current chi2=0.011963880157193903 (change=99.05590981298651 %)
[2026-03-01 09:20:41] 2026-03-01 14:20:10,349 | INFO     | sum of square deviations: 984941258.0
[2026-03-01 09:20:41] 2026-03-01 14:20:10,350 | INFO     | sum of deviations: -915330863.9999994
[2026-03-01 09:20:41] 2026-03-01 14:20:10,350 | INFO     | mean x: 1772370304.0
[2026-03-01 09:20:41] 2026-03-01 14:20:10,350 | INFO     | mean y: 2522679.258503401
[2026-03-01 09:20:41] 2026-03-01 14:20:10,351 | INFO     | intersect: 1649631304.7845364
[2026-03-01 09:20:41] 2026-03-01 14:20:10,351 | INFO     | chi2: 0.011671973668798366
[2026-03-01 09:20:41] 2026-03-01 14:20:10,351 | INFO     | current chi2=0.011671973668798366 (change=2.4398981313768293 %)
[2026-03-01 09:20:41] 2026-03-01 14:20:10,351 | INFO     | left removable region: 20
[2026-03-01 09:20:41] 2026-03-01 14:20:10,352 | INFO     | sum of square deviations: 697054930.0
[2026-03-01 09:20:41] 2026-03-01 14:20:10,353 | INFO     | sum of deviations: 962377724.0000001
[2026-03-01 09:20:41] 2026-03-01 14:20:10,353 | INFO     | mean x: 1772370426.0
[2026-03-01 09:20:41] 2026-03-01 14:20:10,353 | INFO     | mean y: 2518662.328244275
[2026-03-01 09:20:41] 2026-03-01 14:20:10,353 | INFO     | intersect: -2444476177.3163023
[2026-03-01 09:20:41] 2026-03-01 14:20:10,354 | INFO     | chi2: 0.007511081446320543
[2026-03-01 09:20:41] 2026-03-01 14:20:10,354 | INFO     | current memory leak: 1.38 B/s (using 131 data points, chi2=0.01)
[2026-03-01 09:20:41] 2026-03-01 14:20:10,354 | INFO     | could have reported an average CPU frequency of 2572 MHz (9 samples)
[2026-03-01 09:20:41] 2026-03-01 14:20:10,355 | INFO     | ..............................
[2026-03-01 09:20:41] 2026-03-01 14:20:10,355 | INFO     | . Timing measurements:
[2026-03-01 09:20:41] 2026-03-01 14:20:10,355 | INFO     | . get job = 0 s
[2026-03-01 09:20:41] 2026-03-01 14:20:10,355 | INFO     | . initial setup = 1 s
[2026-03-01 09:20:41] 2026-03-01 14:20:10,355 | INFO     | . payload setup = 6 s
[2026-03-01 09:20:41] 2026-03-01 14:20:10,355 | INFO     | . stage-in = 0 s
[2026-03-01 09:20:41] 2026-03-01 14:20:10,356 | INFO     | . payload execution = 9560 s
[2026-03-01 09:20:41] 2026-03-01 14:20:10,356 | INFO     | . stage-out = 2 s
[2026-03-01 09:20:41] 2026-03-01 14:20:10,356 | INFO     | . log creation = 0 s
[2026-03-01 09:20:41] 2026-03-01 14:20:10,356 | INFO     | ..............................
[2026-03-01 09:20:41] 2026-03-01 14:20:10,479 | INFO     | 
[2026-03-01 09:20:41] 2026-03-01 14:20:10,480 | INFO     | job summary report
[2026-03-01 09:20:41] 2026-03-01 14:20:10,480 | INFO     | --------------------------------------------------
[2026-03-01 09:20:41] 2026-03-01 14:20:10,480 | INFO     | PanDA job id: 7034261689
[2026-03-01 09:20:41] 2026-03-01 14:20:10,480 | INFO     | task id: 48843780
[2026-03-01 09:20:41] 2026-03-01 14:20:10,480 | INFO     | errors: (none)
[2026-03-01 09:20:41] 2026-03-01 14:20:10,480 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-01 09:20:41] 2026-03-01 14:20:10,480 | INFO     | pilot state: finished 
[2026-03-01 09:20:41] 2026-03-01 14:20:10,480 | INFO     | transexitcode: 0
[2026-03-01 09:20:41] 2026-03-01 14:20:10,481 | INFO     | exeerrorcode: 0
[2026-03-01 09:20:41] 2026-03-01 14:20:10,481 | INFO     | exeerrordiag: 
[2026-03-01 09:20:41] 2026-03-01 14:20:10,481 | INFO     | exitcode: 0
[2026-03-01 09:20:41] 2026-03-01 14:20:10,481 | INFO     | exitmsg: OK
[2026-03-01 09:20:41] 2026-03-01 14:20:10,481 | INFO     | cpuconsumptiontime: 73239 s
[2026-03-01 09:20:41] 2026-03-01 14:20:10,481 | INFO     | nevents: 400
[2026-03-01 09:20:41] 2026-03-01 14:20:10,481 | INFO     | neventsw: 0
[2026-03-01 09:20:41] 2026-03-01 14:20:10,481 | INFO     | pid: 24651
[2026-03-01 09:20:41] 2026-03-01 14:20:10,481 | INFO     | pgrp: 24651
[2026-03-01 09:20:41] 2026-03-01 14:20:10,481 | INFO     | corecount: 8
[2026-03-01 09:20:41] 2026-03-01 14:20:10,482 | INFO     | event service: False
[2026-03-01 09:20:41] 2026-03-01 14:20:10,482 | INFO     | sizes: {0: 2282335, 11: 2282335, 9570: 2310719, 9571: 2310718, 9575: 2319772, 9577: 2319828, 9580: 2320214}
[2026-03-01 09:20:41] 2026-03-01 14:20:10,482 | INFO     | --------------------------------------------------
[2026-03-01 09:20:41] 2026-03-01 14:20:10,482 | INFO     | 
[2026-03-01 09:20:41] 2026-03-01 14:20:10,482 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-03-01 09:20:41] 2026-03-01 14:20:10,499 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-01 09:20:41] 2026-03-01 14:20:10,500 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-01 09:20:41] 2026-03-01 14:20:10,500 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-01 09:20:41] 2026-03-01 14:20:10,500 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-01 09:20:41] 2026-03-01 14:20:10,500 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-01 09:20:41] 2026-03-01 14:20:10,501 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-01 09:20:41] 2026-03-01 14:20:10,501 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-01 09:20:41] 2026-03-01 14:20:10,501 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-01 09:20:41] 2026-03-01 14:20:10,501 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-01 09:20:41] 2026-03-01 14:20:10,501 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-01 09:20:41] 2026-03-01 14:20:10,502 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-01 09:20:41] 2026-03-01 14:20:10,502 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-01 09:20:41] 2026-03-01 14:20:10,502 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-01 09:20:41] 2026-03-01 14:20:10,502 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-01 09:20:41] 2026-03-01 14:20:10,502 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-01 09:20:41] 2026-03-01 14:20:10,502 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-01 09:20:41] 2026-03-01 14:20:10,503 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-01 09:20:41] 2026-03-01 14:20:10,503 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-01 09:20:41] 2026-03-01 14:20:10,503 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-01 09:20:41] 2026-03-01 14:20:10,503 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-01 09:20:41] 2026-03-01 14:20:10,503 | INFO     | job 7034261689 has completed (purged errors)
[2026-03-01 09:20:41] 2026-03-01 14:20:10,504 | INFO     | overall cleanup function is called
[2026-03-01 09:20:41] 2026-03-01 14:20:11,511 | INFO     | --- collectZombieJob: --- 10, [24651]
[2026-03-01 09:20:41] 2026-03-01 14:20:11,512 | INFO     | zombie collector waiting for pid 24651
[2026-03-01 09:20:41] 2026-03-01 14:20:11,512 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-01 09:20:41] 2026-03-01 14:20:11,512 | INFO     | collected zombie processes
[2026-03-01 09:20:41] 2026-03-01 14:20:11,512 | INFO     | will attempt to kill all subprocesses of pid=24651
[2026-03-01 09:20:41] 2026-03-01 14:20:11,677 | INFO     | process IDs to be killed: [24651] (in reverse order)
[2026-03-01 09:20:41] 2026-03-01 14:20:11,728 | WARNING  | found no corresponding commands to process id(s)
[2026-03-01 09:20:41] 2026-03-01 14:20:11,728 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-01 09:20:41] 2026-03-01 14:20:11,731 | INFO     | did not find any defunct processes belonging to 24651
[2026-03-01 09:20:41] 2026-03-01 14:20:11,733 | INFO     | did not find any defunct processes belonging to 24651
[2026-03-01 09:20:41] 2026-03-01 14:20:11,733 | INFO     | ready for new job
[2026-03-01 09:20:41] 2026-03-01 14:20:11,733 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-01 09:20:41] 2026-03-01 14:20:11,735 | INFO     | **************************************
[2026-03-01 09:20:41] 2026-03-01 14:20:11,735 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-01 09:20:41] 2026-03-01 14:20:11,735 | INFO     | **************************************
[2026-03-01 09:20:41] 2026-03-01 14:20:11,735 | INFO     | 
[2026-03-01 09:20:41] 2026-03-01 14:20:11,736 | INFO     | architecture information:
[2026-03-01 09:20:41] 2026-03-01 14:20:11,736 | INFO     | executing command: cat /etc/os-release
[2026-03-01 09:20:41] 2026-03-01 14:20:11,747 | INFO     | cat /etc/os-release:
[2026-03-01 09:20:41] NAME="CentOS Linux"
[2026-03-01 09:20:41] VERSION="7 (Core)"
[2026-03-01 09:20:41] ID="centos"
[2026-03-01 09:20:41] ID_LIKE="rhel fedora"
[2026-03-01 09:20:41] VERSION_ID="7"
[2026-03-01 09:20:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-01 09:20:41] ANSI_COLOR="0;31"
[2026-03-01 09:20:41] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-01 09:20:41] HOME_URL="https://www.centos.org/"
[2026-03-01 09:20:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-01 09:20:41] 
[2026-03-01 09:20:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-01 09:20:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-01 09:20:41] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-01 09:20:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-01 09:20:41] 
[2026-03-01 09:20:41] 2026-03-01 14:20:11,747 | INFO     | **************************************
[2026-03-01 09:20:41] 2026-03-01 14:20:12,251 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-03-01 09:20:41] 2026-03-01 14:20:12,291 | INFO     | sufficient remaining disk space (28143779840 B)
[2026-03-01 09:20:41] 2026-03-01 14:20:12,291 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-01 09:20:41] 2026-03-01 14:20:12,292 | INFO     | current server update state: UPDATING_FINAL
[2026-03-01 09:20:41] 2026-03-01 14:20:12,292 | INFO     | update_server=False
[2026-03-01 09:20:41] 2026-03-01 14:20:12,292 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-01 09:20:41] 2026-03-01 14:20:12,292 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-01 09:20:41] 2026-03-01 14:20:12,293 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-01 09:20:41] 2026-03-01 14:20:12,293 | INFO     | aborting loop
[2026-03-01 09:20:41] 2026-03-01 14:20:12,293 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-01 09:20:41] 2026-03-01 14:20:12,293 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-03-01 09:20:41] 2026-03-01 14:20:12,294 | INFO     | found 0 job(s) in 20 queues
[2026-03-01 09:20:41] 2026-03-01 14:20:12,294 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-01 09:20:41] 2026-03-01 14:20:12,294 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-01 09:20:41] 2026-03-01 14:20:13,071 | INFO     | all data control threads have been joined
[2026-03-01 09:20:41] 2026-03-01 14:20:13,294 | INFO     | [job] job monitor thread has finished
[2026-03-01 09:20:41] 2026-03-01 14:20:13,298 | INFO     | [job] retrieve thread has finished
[2026-03-01 09:20:41] 2026-03-01 14:20:13,299 | INFO     | [job] queue monitor thread has finished
[2026-03-01 09:20:41] 2026-03-01 14:20:13,461 | INFO     | [payload] validate_pre thread has finished
[2026-03-01 09:20:41] 2026-03-01 14:20:13,465 | INFO     | [job] create_data_payload thread has finished
[2026-03-01 09:20:41] 2026-03-01 14:20:13,487 | INFO     | [job] validate thread has finished
[2026-03-01 09:20:41] 2026-03-01 14:20:13,489 | INFO     | all payload control threads have been joined
[2026-03-01 09:20:41] 2026-03-01 14:20:13,640 | INFO     | [payload] failed_post thread has finished
[2026-03-01 09:20:41] 2026-03-01 14:20:13,749 | INFO     | all job control threads have been joined
[2026-03-01 09:20:41] 2026-03-01 14:20:13,907 | INFO     | [data] copytool_in thread has finished
[2026-03-01 09:20:41] 2026-03-01 14:20:14,076 | INFO     | [data] control thread has finished
[2026-03-01 09:20:41] 2026-03-01 14:20:14,238 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-01 09:20:41] 2026-03-01 14:20:14,301 | INFO     | [data] copytool_out thread has finished
[2026-03-01 09:20:41] 2026-03-01 14:20:14,359 | INFO     | [payload] validate_post thread has finished
[2026-03-01 09:20:41] 2026-03-01 14:20:14,364 | INFO     | [payload] execute_payloads thread has finished
[2026-03-01 09:20:41] 2026-03-01 14:20:14,495 | INFO     | [payload] control thread has finished
[2026-03-01 09:20:41] 2026-03-01 14:20:14,755 | INFO     | [job] control thread has finished
[2026-03-01 09:20:41] 2026-03-01 14:20:14,755 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-01 09:20:41] 2026-03-01 14:20:18,244 | INFO     | [data] queue_monitor thread has finished
[2026-03-01 09:20:41] 2026-03-01 14:20:34,298 | INFO     | [monitor] cgroup control has ended
[2026-03-01 09:20:41] 2026-03-01 14:20:36,398 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140213390952256)>', '<ExcThread(monitor, started 140212285990656)>']
[2026-03-01 09:20:41] 2026-03-01 14:20:36,415 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-01 09:20:41] 2026-03-01 14:20:36,416 | INFO     | [monitor] control thread has ended
[2026-03-01 09:20:41] 2026-03-01 14:20:41,401 | INFO     | all workflow threads have been joined
[2026-03-01 09:20:41] 2026-03-01 14:20:41,402 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-01 09:20:41] 2026-03-01 14:20:41,402 | INFO     | traces error code: 0
[2026-03-01 09:20:41] 2026-03-01 14:20:41,402 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-01 09:20:41] 2026-03-01 14:20:41,510 [wrapper] ==== pilot stdout END ====
[2026-03-01 09:20:41] 2026-03-01 14:20:41,512 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-01 09:20:41] 2026-03-01 14:20:41,515 [wrapper] pilotpid: 17478
[2026-03-01 09:20:41] 2026-03-01 14:20:41,517 [wrapper] Pilot exit status: 0
[2026-03-01 09:20:41] 2026-03-01 14:20:41,526 [wrapper] pandaids: 7034261689 7034261689
[2026-03-01 09:20:41] 2026-03-01 14:20:41,557 [wrapper] cleanup supervisor_pilot  5338 17480
[2026-03-01 09:20:41] 2026-03-01 14:20:41,559 [wrapper] Test setup, not cleaning
[2026-03-01 09:20:41] 2026-03-01 14:20:41,561 [wrapper] apfmon messages muted
[2026-03-01 09:20:41] 2026-03-01 14:20:41,563 [wrapper] ==== wrapper stdout END ====
[2026-03-01 09:20:41] 2026-03-01 14:20:41,565 [wrapper] ==== wrapper stderr END ====
[2026-03-01 09:20:41]  *** Error codes and diagnostics ***
[2026-03-01 09:20:41]     "exeErrorCode": 0,
[2026-03-01 09:20:41]     "exeErrorDiag": "",
[2026-03-01 09:20:41]     "pilotErrorCode": 0,
[2026-03-01 09:20:41]     "pilotErrorDiag": "",
[2026-03-01 09:20:41]  *** Listing of results directory ***
[2026-03-01 09:20:41] total 661536
[2026-03-01 09:20:41] drwx------ 5 boincer umatlas      4096 Feb  2 10:00 pilot3
[2026-03-01 09:20:41] -rw-r--r-- 1 boincer umatlas    584627 Feb 28 21:30 pilot3.tar.gz
[2026-03-01 09:20:41] -rwx------ 1 boincer umatlas     36322 Feb 28 21:35 runpilot2-wrapper.sh
[2026-03-01 09:20:41] -rw-r--r-- 1 boincer umatlas      5111 Feb 28 21:35 queuedata.json
[2026-03-01 09:20:41] -rw-r--r-- 1 boincer umatlas       100 Mar  1 04:46 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-01 09:20:41] -rwxr-xr-x 1 boincer umatlas      7986 Mar  1 04:46 run_atlas
[2026-03-01 09:20:41] -rw-r--r-- 1 boincer umatlas       105 Mar  1 04:46 job.xml
[2026-03-01 09:20:41] -rw-r--r-- 3 boincer umatlas 252508605 Mar  1 04:46 EVNT.48451780._000003.pool.root.1
[2026-03-01 09:20:41] -rw-r--r-- 3 boincer umatlas 252508605 Mar  1 04:46 ATLAS.root_0
[2026-03-01 09:20:41] -rw-r--r-- 2 boincer umatlas     15845 Mar  1 04:46 start_atlas.sh
[2026-03-01 09:20:41] drwxrwx--x 2 boincer umatlas      4096 Mar  1 04:46 shared
[2026-03-01 09:20:41] -rw-r--r-- 2 boincer umatlas    597952 Mar  1 04:46 input.tar.gz
[2026-03-01 09:20:41] -rw-r--r-- 1 boincer umatlas         0 Mar  1 04:46 boinc_lockfile
[2026-03-01 09:20:41] -rw-r--r-- 1 boincer umatlas      2609 Mar  1 06:40 pandaJob.out
[2026-03-01 09:20:41] -rw------- 1 boincer umatlas        57 Mar  1 06:40 setup.sh.local
[2026-03-01 09:20:41] -rw------- 1 boincer umatlas    998184 Mar  1 06:40 agis_schedconf.cvmfs.json
[2026-03-01 09:20:41] -rw------- 1 boincer umatlas       434 Mar  1 06:40 workernode_map.json
[2026-03-01 09:20:41] -rw------- 1 boincer umatlas 164950534 Mar  1 09:19 HITS.48843780._000065.pool.root.1
[2026-03-01 09:20:41] -rw------- 1 boincer umatlas        95 Mar  1 09:19 pilot_heartbeat.json
[2026-03-01 09:20:41] -rw-r--r-- 1 boincer umatlas       531 Mar  1 09:19 boinc_task_state.xml
[2026-03-01 09:20:41] -rw------- 1 boincer umatlas      1051 Mar  1 09:19 memory_monitor_summary.json
[2026-03-01 09:20:41] -rw-r--r-- 1 boincer umatlas      5952 Mar  1 09:20 init_data.xml
[2026-03-01 09:20:41] -rw------- 1 boincer umatlas   1513015 Mar  1 09:20 agis_ddmendpoints.agis.ALL.json
[2026-03-01 09:20:41] -rw------- 1 boincer umatlas    398628 Mar  1 09:20 log.48843780._000065.job.log.tgz.1
[2026-03-01 09:20:41] -rw------- 1 boincer umatlas      6397 Mar  1 09:20 heartbeat.json
[2026-03-01 09:20:41] -rw-r--r-- 1 boincer umatlas      8192 Mar  1 09:20 boinc_mmap_file
[2026-03-01 09:20:41] -rw-r--r-- 1 boincer umatlas        29 Mar  1 09:20 wrapper_checkpoint.txt
[2026-03-01 09:20:41] -rw------- 1 boincer umatlas      4548 Mar  1 09:20 pilotlog.txt
[2026-03-01 09:20:41] -rw------- 1 boincer umatlas   1355856 Mar  1 09:20 log.48843780._000065.job.log.1
[2026-03-01 09:20:41] -rw------- 1 boincer umatlas       357 Mar  1 09:20 output.list
[2026-03-01 09:20:41] -rw-r--r-- 1 boincer umatlas       620 Mar  1 09:20 runtime_log
[2026-03-01 09:20:41] -rw------- 1 boincer umatlas   1771520 Mar  1 09:20 result.tar.gz
[2026-03-01 09:20:41] -rw-r--r-- 1 boincer umatlas      9426 Mar  1 09:20 runtime_log.err
[2026-03-01 09:20:41] -rw------- 1 boincer umatlas       782 Mar  1 09:20 Jk1LDmSplG9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDm8n8KDmzd5r3m.diag
[2026-03-01 09:20:41] -rw-r--r-- 1 boincer umatlas     23353 Mar  1 09:20 stderr.txt
[2026-03-01 09:20:41] HITS file was successfully produced:
[2026-03-01 09:20:41] -rw------- 1 boincer umatlas 164950534 Mar  1 09:19 shared/HITS.pool.root.1
[2026-03-01 09:20:41]  *** Contents of shared directory: ***
[2026-03-01 09:20:41] total 410016
[2026-03-01 09:20:41] -rw-r--r-- 3 boincer umatlas 252508605 Mar  1 04:46 ATLAS.root_0
[2026-03-01 09:20:41] -rw-r--r-- 2 boincer umatlas     15845 Mar  1 04:46 start_atlas.sh
[2026-03-01 09:20:41] -rw-r--r-- 2 boincer umatlas    597952 Mar  1 04:46 input.tar.gz
[2026-03-01 09:20:41] -rw------- 1 boincer umatlas 164950534 Mar  1 09:19 HITS.pool.root.1
[2026-03-01 09:20:41] -rw------- 1 boincer umatlas   1771520 Mar  1 09:20 result.tar.gz
09:20:43 (6371): run_atlas exited; CPU time 73361.921954
09:20:43 (6371): called boinc_finish(0)

</stderr_txt>
]]>

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