Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
00:29:41 (21975): wrapper (7.7.26015): starting
00:29:41 (21975): wrapper: running run_atlas (--nthreads 8)
[2026-03-02 00:29:41] Arguments: --nthreads 8
[2026-03-02 00:29:41] Threads: 8
[2026-03-02 00:29:41] Checking for CVMFS
[2026-03-02 00:29:42] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-02 00:29:43] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-02 00:29:43] Running cvmfs_config stat atlas.cern.ch
[2026-03-02 00:29:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-02 00:29:44] 2.11.2.0 29161 109499 135696 156788 1 54 22017506 25165824 899 130560 155 38773145 99.801 30154514 1094 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-03-02 00:29:44] CVMFS is ok
[2026-03-02 00:29:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-02 00:29:44] Checking for apptainer binary...
[2026-03-02 00:29:44] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-02 00:29:44] Running /usr/bin/apptainer --version
[2026-03-02 00:29:44] apptainer version 1.3.2-1.el7
[2026-03-02 00:29:44] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-02 00:30:06] cg-vwn454.simple-grid.lan
[2026-03-02 00:30:06] apptainer works
[2026-03-02 00:30:06] Set ATHENA_PROC_NUMBER=8
[2026-03-02 00:30:06] Set ATHENA_CORE_NUMBER=8
[2026-03-02 00:30:07] Starting ATLAS job with PandaID=7034641697
[2026-03-02 00:30:07] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-02 03:41:03]  *** The last 200 lines of the pilot log: ***
[2026-03-02 03:41:03] 2026-03-02 02:40:04,665 | INFO     | job 7034641697 has finished - writing final server update
[2026-03-02 03:41:03] 2026-03-02 02:40:04,665 | INFO     | total number of processed events: 400 (read)
[2026-03-02 03:41:03] 2026-03-02 02:40:04,667 | INFO     | using path: /var/lib/boinc/slots/4/PanDA_Pilot-7034641697/memory_monitor_summary.json (trf name=prmon)
[2026-03-02 03:41:03] 2026-03-02 02:40:04,668 | INFO     | extracted standard info from prmon json
[2026-03-02 03:41:03] 2026-03-02 02:40:04,668 | INFO     | extracted standard memory fields from prmon json
[2026-03-02 03:41:03] 2026-03-02 02:40:04,668 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-02 03:41:03] 2026-03-02 02:40:04,668 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-02 03:41:03] 2026-03-02 02:40:04,668 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-02 03:41:03] 2026-03-02 02:40:04,672 | INFO     | fitting pss+swap vs Time
[2026-03-02 03:41:03] 2026-03-02 02:40:04,672 | INFO     | sum of square deviations: 1690450300.0
[2026-03-02 03:41:03] 2026-03-02 02:40:04,674 | INFO     | sum of deviations: 77106454396.0
[2026-03-02 03:41:03] 2026-03-02 02:40:04,674 | INFO     | mean x: 1772413817.5
[2026-03-02 03:41:03] 2026-03-02 02:40:04,674 | INFO     | mean y: 2369953.0454545454
[2026-03-02 03:41:03] 2026-03-02 02:40:04,674 | INFO     | intersect: -80842683693.2546
[2026-03-02 03:41:03] 2026-03-02 02:40:04,674 | INFO     | chi2: 9.05542544290051
[2026-03-02 03:41:03] 2026-03-02 02:40:04,675 | INFO     | sum of square deviations: 1550429070.0
[2026-03-02 03:41:03] 2026-03-02 02:40:04,676 | INFO     | sum of deviations: 86240551574.0
[2026-03-02 03:41:03] 2026-03-02 02:40:04,676 | INFO     | mean x: 1772413665.0
[2026-03-02 03:41:03] 2026-03-02 02:40:04,676 | INFO     | mean y: 2379613.1988304094
[2026-03-02 03:41:03] 2026-03-02 02:40:04,676 | INFO     | intersect: -98585769335.07576
[2026-03-02 03:41:03] 2026-03-02 02:40:04,677 | INFO     | chi2: 8.403944743523818
[2026-03-02 03:41:03] 2026-03-02 02:40:04,677 | INFO     | current chi2=8.403944743523818 (change=7.194368762513044 %)
[2026-03-02 03:41:03] 2026-03-02 02:40:04,677 | INFO     | right removable region: 170
[2026-03-02 03:41:03] 2026-03-02 02:40:04,677 | INFO     | sum of square deviations: 1550429070.0
[2026-03-02 03:41:03] 2026-03-02 02:40:04,678 | INFO     | sum of deviations: 17523049892.999985
[2026-03-02 03:41:03] 2026-03-02 02:40:04,679 | INFO     | mean x: 1772413970.0
[2026-03-02 03:41:03] 2026-03-02 02:40:04,679 | INFO     | mean y: 2434793.98245614
[2026-03-02 03:41:03] 2026-03-02 02:40:04,679 | INFO     | intersect: -20029502834.32851
[2026-03-02 03:41:03] 2026-03-02 02:40:04,679 | INFO     | chi2: 3.741241740303509
[2026-03-02 03:41:03] 2026-03-02 02:40:04,679 | INFO     | current chi2=3.741241740303509 (change=58.68508040959403 %)
[2026-03-02 03:41:03] 2026-03-02 02:40:04,680 | INFO     | sum of square deviations: 1418361477.5
[2026-03-02 03:41:03] 2026-03-02 02:40:04,681 | INFO     | sum of deviations: -27163080644.0
[2026-03-02 03:41:03] 2026-03-02 02:40:04,681 | INFO     | mean x: 1772414122.5
[2026-03-02 03:41:03] 2026-03-02 02:40:04,681 | INFO     | mean y: 2486296.795180723
[2026-03-02 03:41:03] 2026-03-02 02:40:04,681 | INFO     | intersect: 33946039127.12929
[2026-03-02 03:41:03] 2026-03-02 02:40:04,681 | INFO     | chi2: 1.0114242664724613
[2026-03-02 03:41:03] 2026-03-02 02:40:04,682 | INFO     | current chi2=1.0114242664724613 (change=72.96554628970837 %)
[2026-03-02 03:41:03] 2026-03-02 02:40:04,682 | INFO     | sum of square deviations: 1294014960.0
[2026-03-02 03:41:03] 2026-03-02 02:40:04,686 | INFO     | sum of deviations: -31135372340.0
[2026-03-02 03:41:03] 2026-03-02 02:40:04,686 | INFO     | mean x: 1772414275.0
[2026-03-02 03:41:03] 2026-03-02 02:40:04,686 | INFO     | mean y: 2491045.6273291926
[2026-03-02 03:41:03] 2026-03-02 02:40:04,686 | INFO     | intersect: 42648658283.7991
[2026-03-02 03:41:03] 2026-03-02 02:40:04,687 | INFO     | chi2: 0.9241515335336141
[2026-03-02 03:41:03] 2026-03-02 02:40:04,687 | INFO     | current chi2=0.9241515335336141 (change=8.62869676275692 %)
[2026-03-02 03:41:03] 2026-03-02 02:40:04,687 | INFO     | left removable region: 30
[2026-03-02 03:41:03] 2026-03-02 02:40:04,687 | INFO     | sum of square deviations: 850825255.0
[2026-03-02 03:41:03] 2026-03-02 02:40:04,688 | INFO     | sum of deviations: -3454745522.499999
[2026-03-02 03:41:03] 2026-03-02 02:40:04,688 | INFO     | mean x: 1772414549.5
[2026-03-02 03:41:03] 2026-03-02 02:40:04,688 | INFO     | mean y: 2481140.464285714
[2026-03-02 03:41:03] 2026-03-02 02:40:04,689 | INFO     | intersect: 7199307037.338936
[2026-03-02 03:41:03] 2026-03-02 02:40:04,689 | INFO     | chi2: 0.04881566100326113
[2026-03-02 03:41:03] 2026-03-02 02:40:04,689 | INFO     | current memory leak: -4.06 B/s (using 140 data points, chi2=0.05)
[2026-03-02 03:41:03] 2026-03-02 02:40:04,690 | INFO     | could have reported an average CPU frequency of 2250 MHz (10 samples)
[2026-03-02 03:41:03] 2026-03-02 02:40:04,690 | INFO     | ..............................
[2026-03-02 03:41:03] 2026-03-02 02:40:04,690 | INFO     | . Timing measurements:
[2026-03-02 03:41:03] 2026-03-02 02:40:04,690 | INFO     | . get job = 0 s
[2026-03-02 03:41:03] 2026-03-02 02:40:04,690 | INFO     | . initial setup = 121 s
[2026-03-02 03:41:03] 2026-03-02 02:40:04,690 | INFO     | . payload setup = 150 s
[2026-03-02 03:41:03] 2026-03-02 02:40:04,690 | INFO     | . stage-in = 0 s
[2026-03-02 03:41:03] 2026-03-02 02:40:04,690 | INFO     | . payload execution = 10843 s
[2026-03-02 03:41:03] 2026-03-02 02:40:04,690 | INFO     | . stage-out = 3 s
[2026-03-02 03:41:03] 2026-03-02 02:40:04,690 | INFO     | . log creation = 1 s
[2026-03-02 03:41:03] 2026-03-02 02:40:04,690 | INFO     | ..............................
[2026-03-02 03:41:03] 2026-03-02 02:40:05,056 | INFO     | 
[2026-03-02 03:41:03] 2026-03-02 02:40:05,056 | INFO     | job summary report
[2026-03-02 03:41:03] 2026-03-02 02:40:05,056 | INFO     | --------------------------------------------------
[2026-03-02 03:41:03] 2026-03-02 02:40:05,056 | INFO     | PanDA job id: 7034641697
[2026-03-02 03:41:03] 2026-03-02 02:40:05,056 | INFO     | task id: 48700922
[2026-03-02 03:41:03] 2026-03-02 02:40:05,056 | INFO     | errors: (none)
[2026-03-02 03:41:03] 2026-03-02 02:40:05,057 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-02 03:41:03] 2026-03-02 02:40:05,057 | INFO     | pilot state: finished 
[2026-03-02 03:41:03] 2026-03-02 02:40:05,057 | INFO     | transexitcode: 0
[2026-03-02 03:41:03] 2026-03-02 02:40:05,057 | INFO     | exeerrorcode: 0
[2026-03-02 03:41:03] 2026-03-02 02:40:05,057 | INFO     | exeerrordiag: 
[2026-03-02 03:41:03] 2026-03-02 02:40:05,057 | INFO     | exitcode: 0
[2026-03-02 03:41:03] 2026-03-02 02:40:05,057 | INFO     | exitmsg: OK
[2026-03-02 03:41:03] 2026-03-02 02:40:05,057 | INFO     | cpuconsumptiontime: 39656 s
[2026-03-02 03:41:03] 2026-03-02 02:40:05,058 | INFO     | nevents: 400
[2026-03-02 03:41:03] 2026-03-02 02:40:05,058 | INFO     | neventsw: 0
[2026-03-02 03:41:03] 2026-03-02 02:40:05,058 | INFO     | pid: 30414
[2026-03-02 03:41:03] 2026-03-02 02:40:05,058 | INFO     | pgrp: 30414
[2026-03-02 03:41:03] 2026-03-02 02:40:05,058 | INFO     | corecount: 8
[2026-03-02 03:41:03] 2026-03-02 02:40:05,058 | INFO     | event service: False
[2026-03-02 03:41:03] 2026-03-02 02:40:05,058 | INFO     | sizes: {0: 2281778, 1: 2282239, 2: 2282239, 10998: 2311336, 10999: 2311335, 11003: 2320389, 11005: 2320573, 11007: 2320767}
[2026-03-02 03:41:03] 2026-03-02 02:40:05,058 | INFO     | --------------------------------------------------
[2026-03-02 03:41:03] 2026-03-02 02:40:05,058 | INFO     | 
[2026-03-02 03:41:03] 2026-03-02 02:40:05,058 | INFO     | executing command: ls -lF /var/lib/boinc/slots/4
[2026-03-02 03:41:03] 2026-03-02 02:40:05,532 | INFO     | time since job start (11011s) is within the limit (349056.0s)
[2026-03-02 03:41:03] 2026-03-02 02:40:05,609 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-02 03:41:03] 2026-03-02 02:40:05,610 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-02 03:41:03] 2026-03-02 02:40:05,610 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-02 03:41:03] 2026-03-02 02:40:05,610 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-02 03:41:03] 2026-03-02 02:40:05,610 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-02 03:41:03] 2026-03-02 02:40:05,610 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-02 03:41:03] 2026-03-02 02:40:05,610 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-02 03:41:03] 2026-03-02 02:40:05,610 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-02 03:41:03] 2026-03-02 02:40:05,610 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-02 03:41:03] 2026-03-02 02:40:05,611 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-02 03:41:03] 2026-03-02 02:40:05,611 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-02 03:41:03] 2026-03-02 02:40:05,611 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-02 03:41:03] 2026-03-02 02:40:05,611 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-02 03:41:03] 2026-03-02 02:40:05,611 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-02 03:41:03] 2026-03-02 02:40:05,611 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-02 03:41:03] 2026-03-02 02:40:05,611 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-02 03:41:03] 2026-03-02 02:40:05,611 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-02 03:41:03] 2026-03-02 02:40:05,611 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-02 03:41:03] 2026-03-02 02:40:05,611 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-02 03:41:03] 2026-03-02 02:40:05,612 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-02 03:41:03] 2026-03-02 02:40:05,612 | INFO     | job 7034641697 has completed (purged errors)
[2026-03-02 03:41:03] 2026-03-02 02:40:05,612 | INFO     | overall cleanup function is called
[2026-03-02 03:41:03] 2026-03-02 02:40:06,621 | INFO     | --- collectZombieJob: --- 10, [30414]
[2026-03-02 03:41:03] 2026-03-02 02:40:06,621 | INFO     | zombie collector waiting for pid 30414
[2026-03-02 03:41:03] 2026-03-02 02:40:06,621 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-02 03:41:03] 2026-03-02 02:40:06,621 | INFO     | collected zombie processes
[2026-03-02 03:41:03] 2026-03-02 02:40:06,621 | INFO     | will attempt to kill all subprocesses of pid=30414
[2026-03-02 03:41:03] 2026-03-02 02:40:06,690 | INFO     | process IDs to be killed: [30414] (in reverse order)
[2026-03-02 03:41:03] 2026-03-02 02:40:07,534 | WARNING  | found no corresponding commands to process id(s)
[2026-03-02 03:41:03] 2026-03-02 02:40:07,535 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-02 03:41:03] 2026-03-02 02:40:07,537 | INFO     | did not find any defunct processes belonging to 30414
[2026-03-02 03:41:03] 2026-03-02 02:40:07,538 | INFO     | did not find any defunct processes belonging to 30414
[2026-03-02 03:41:03] 2026-03-02 02:40:07,538 | INFO     | ready for new job
[2026-03-02 03:41:03] 2026-03-02 02:40:07,539 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-02 03:41:03] 2026-03-02 02:40:07,541 | INFO     | **************************************
[2026-03-02 03:41:03] 2026-03-02 02:40:07,541 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-02 03:41:03] 2026-03-02 02:40:07,541 | INFO     | **************************************
[2026-03-02 03:41:03] 2026-03-02 02:40:07,541 | INFO     | 
[2026-03-02 03:41:03] 2026-03-02 02:40:07,547 | INFO     | pilot is running in a VM
[2026-03-02 03:41:03] 2026-03-02 02:40:07,547 | INFO     | architecture information:
[2026-03-02 03:41:03] 2026-03-02 02:40:07,556 | INFO     | executing command: cat /etc/os-release
[2026-03-02 03:41:03] 2026-03-02 02:40:07,885 | INFO     | cat /etc/os-release:
[2026-03-02 03:41:03] NAME="CentOS Linux"
[2026-03-02 03:41:03] VERSION="7 (Core)"
[2026-03-02 03:41:03] ID="centos"
[2026-03-02 03:41:03] ID_LIKE="rhel fedora"
[2026-03-02 03:41:03] VERSION_ID="7"
[2026-03-02 03:41:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-02 03:41:03] ANSI_COLOR="0;31"
[2026-03-02 03:41:03] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-02 03:41:03] HOME_URL="https://www.centos.org/"
[2026-03-02 03:41:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-02 03:41:03] 
[2026-03-02 03:41:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-02 03:41:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-02 03:41:03] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-02 03:41:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-02 03:41:03] 
[2026-03-02 03:41:03] 2026-03-02 02:40:07,885 | INFO     | **************************************
[2026-03-02 03:41:03] 2026-03-02 02:40:08,389 | INFO     | executing command: df -mP /var/lib/boinc/slots/4
[2026-03-02 03:41:03] 2026-03-02 02:40:08,675 | INFO     | sufficient remaining disk space (497460183040 B)
[2026-03-02 03:41:03] 2026-03-02 02:40:08,675 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-02 03:41:03] 2026-03-02 02:40:08,675 | INFO     | current server update state: UPDATING_FINAL
[2026-03-02 03:41:03] 2026-03-02 02:40:08,675 | INFO     | update_server=False
[2026-03-02 03:41:03] 2026-03-02 02:40:08,675 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-02 03:41:03] 2026-03-02 02:40:08,680 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-02 03:41:03] 2026-03-02 02:40:08,830 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-02 03:41:03] 2026-03-02 02:40:08,877 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-02 03:41:03] 2026-03-02 02:40:08,877 | INFO     | aborting loop
[2026-03-02 03:41:03] 2026-03-02 02:40:09,171 | INFO     | all payload control threads have been joined
[2026-03-02 03:41:03] 2026-03-02 02:40:09,522 | INFO     | all job control threads have been joined
[2026-03-02 03:41:03] 2026-03-02 02:40:09,682 | INFO     | [job] retrieve thread has finished
[2026-03-02 03:41:03] 2026-03-02 02:40:09,697 | INFO     | all data control threads have been joined
[2026-03-02 03:41:03] 2026-03-02 02:40:09,827 | INFO     | [payload] validate_pre thread has finished
[2026-03-02 03:41:03] 2026-03-02 02:40:09,837 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-02 03:41:03] 2026-03-02 02:40:09,883 | INFO     | [job] job monitor thread has finished
[2026-03-02 03:41:03] 2026-03-02 02:40:09,920 | INFO     | [payload] validate_post thread has finished
[2026-03-02 03:41:03] 2026-03-02 02:40:10,177 | INFO     | [payload] control thread has finished
[2026-03-02 03:41:03] 2026-03-02 02:40:10,281 | INFO     | [payload] execute_payloads thread has finished
[2026-03-02 03:41:03] 2026-03-02 02:40:10,374 | INFO     | [payload] failed_post thread has finished
[2026-03-02 03:41:03] 2026-03-02 02:40:10,528 | INFO     | [job] control thread has finished
[2026-03-02 03:41:03] 2026-03-02 02:40:10,551 | INFO     | [job] create_data_payload thread has finished
[2026-03-02 03:41:03] 2026-03-02 02:40:10,569 | INFO     | [data] copytool_in thread has finished
[2026-03-02 03:41:03] 2026-03-02 02:40:10,657 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-02 03:41:03] 2026-03-02 02:40:10,703 | INFO     | [data] control thread has finished
[2026-03-02 03:41:03] 2026-03-02 02:40:10,831 | INFO     | [job] validate thread has finished
[2026-03-02 03:41:03] 2026-03-02 02:40:10,837 | INFO     | [data] copytool_out thread has finished
[2026-03-02 03:41:03] 2026-03-02 02:40:10,843 | INFO     | [job] queue monitor thread has finished
[2026-03-02 03:41:03] 2026-03-02 02:40:12,689 | INFO     | [data] queue_monitor thread has finished
[2026-03-02 03:41:03] 2026-03-02 02:40:38,638 | INFO     | PID=25948 has CPU usage=3.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-02 03:41:03] 2026-03-02 02:40:38,638 | INFO     | .. there are 2 such processes running
[2026-03-02 03:41:03] 2026-03-02 02:40:38,640 | INFO     | found 0 job(s) in 20 queues
[2026-03-02 03:41:03] 2026-03-02 02:40:38,640 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-02 03:41:03] 2026-03-02 02:40:38,640 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-02 03:41:03] 2026-03-02 02:40:52,647 | INFO     | [monitor] cgroup control has ended
[2026-03-02 03:41:03] 2026-03-02 02:40:53,877 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140112050100032)>', '<ExcThread(monitor, started 140111597516544)>']
[2026-03-02 03:41:03] 2026-03-02 02:40:54,736 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-02 03:41:03] 2026-03-02 02:40:54,736 | INFO     | [monitor] control thread has ended
[2026-03-02 03:41:03] 2026-03-02 02:40:58,903 | INFO     | all workflow threads have been joined
[2026-03-02 03:41:03] 2026-03-02 02:40:58,903 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-02 03:41:03] 2026-03-02 02:40:58,903 | INFO     | traces error code: 0
[2026-03-02 03:41:03] 2026-03-02 02:40:58,903 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-02 03:41:03] 2026-03-02 02:40:59,325 [wrapper] ==== pilot stdout END ====
[2026-03-02 03:41:03] 2026-03-02 02:40:59,419 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-02 03:41:03] 2026-03-02 02:40:59,522 [wrapper] pilotpid: 25948
[2026-03-02 03:41:03] 2026-03-02 02:40:59,639 [wrapper] Pilot exit status: 0
[2026-03-02 03:41:03] 2026-03-02 02:41:00,096 [wrapper] pandaids: 7034641697
[2026-03-02 03:41:03] 2026-03-02 02:41:01,006 [wrapper] cleanup supervisor_pilot  3831 25949
[2026-03-02 03:41:03] 2026-03-02 02:41:01,118 [wrapper] Test setup, not cleaning
[2026-03-02 03:41:03] 2026-03-02 02:41:01,229 [wrapper] apfmon messages muted
[2026-03-02 03:41:03] 2026-03-02 02:41:01,338 [wrapper] ==== wrapper stdout END ====
[2026-03-02 03:41:03] 2026-03-02 02:41:01,433 [wrapper] ==== wrapper stderr END ====
[2026-03-02 03:41:03]  *** Error codes and diagnostics ***
[2026-03-02 03:41:03]     "exeErrorCode": 0,
[2026-03-02 03:41:03]     "exeErrorDiag": "",
[2026-03-02 03:41:03]     "pilotErrorCode": 0,
[2026-03-02 03:41:03]     "pilotErrorDiag": "",
[2026-03-02 03:41:03]  *** Listing of results directory ***
[2026-03-02 03:41:03] total 334412
[2026-03-02 03:41:03] -rw-r--r--. 1 boinc boinc    584627 Mar  1 10:10 pilot3.tar.gz
[2026-03-02 03:41:03] -rwx------. 1 boinc boinc     36322 Mar  1 10:21 runpilot2-wrapper.sh
[2026-03-02 03:41:03] -rw-r--r--. 1 boinc boinc      5111 Mar  1 10:23 queuedata.json
[2026-03-02 03:41:03] -rw-r--r--. 1 boinc boinc       100 Mar  2 00:29 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-02 03:41:03] -rwxr-xr-x. 1 boinc boinc      7986 Mar  2 00:29 run_atlas
[2026-03-02 03:41:03] -rw-r--r--. 1 boinc boinc       105 Mar  2 00:29 job.xml
[2026-03-02 03:41:03] -rw-r--r--. 1 boinc boinc      6390 Mar  2 00:29 init_data.xml
[2026-03-02 03:41:03] -rw-r--r--. 2 boinc boinc 191692203 Mar  2 00:29 EVNT.48700920._000084.pool.root.1
[2026-03-02 03:41:03] -rw-r--r--. 2 boinc boinc     15845 Mar  2 00:29 start_atlas.sh
[2026-03-02 03:41:03] drwxrwx--x. 2 boinc boinc        68 Mar  2 00:29 shared
[2026-03-02 03:41:03] -rw-r--r--. 2 boinc boinc    597928 Mar  2 00:29 input.tar.gz
[2026-03-02 03:41:03] -rw-r--r--. 1 boinc boinc         0 Mar  2 00:29 boinc_lockfile
[2026-03-02 03:41:03] -rw-r--r--. 1 boinc boinc      2516 Mar  2 00:30 pandaJob.out
[2026-03-02 03:41:03] -rw-------. 1 boinc boinc       413 Mar  2 00:36 workernode_map.json
[2026-03-02 03:41:03] -rw-------. 1 boinc boinc    998184 Mar  2 00:36 agis_schedconf.cvmfs.json
[2026-03-02 03:41:03] drwx------. 5 boinc boinc      4096 Mar  2 00:36 pilot3
[2026-03-02 03:41:03] -rw-------. 1 boinc boinc 142854800 Mar  2 03:38 HITS.48700922._002115.pool.root.1
[2026-03-02 03:41:03] -rw-r--r--. 1 boinc boinc       530 Mar  2 03:38 boinc_task_state.xml
[2026-03-02 03:41:03] -rw-------. 1 boinc boinc      1023 Mar  2 03:39 memory_monitor_summary.json
[2026-03-02 03:41:03] -rw-------. 1 boinc boinc   1513015 Mar  2 03:39 agis_ddmendpoints.agis.ALL.json
[2026-03-02 03:41:03] -rw-------. 1 boinc boinc    429396 Mar  2 03:39 log.48700922._002115.job.log.tgz.1
[2026-03-02 03:41:03] -rw-------. 1 boinc boinc      6310 Mar  2 03:40 heartbeat.json
[2026-03-02 03:41:03] -rw-------. 1 boinc boinc        95 Mar  2 03:40 pilot_heartbeat.json
[2026-03-02 03:41:03] -rw-r--r--. 1 boinc boinc      8192 Mar  2 03:40 boinc_mmap_file
[2026-03-02 03:41:03] -rw-r--r--. 1 boinc boinc        28 Mar  2 03:40 wrapper_checkpoint.txt
[2026-03-02 03:41:03] -rw-------. 1 boinc boinc      4880 Mar  2 03:40 pilotlog.txt
[2026-03-02 03:41:03] -rw-------. 1 boinc boinc   1561568 Mar  2 03:41 log.48700922._002115.job.log.1
[2026-03-02 03:41:03] -rw-------. 1 boinc boinc       357 Mar  2 03:41 output.list
[2026-03-02 03:41:03] -rw-r--r--. 1 boinc boinc       620 Mar  2 03:41 runtime_log
[2026-03-02 03:41:03] -rw-------. 1 boinc boinc   2007040 Mar  2 03:41 result.tar.gz
[2026-03-02 03:41:03] -rw-r--r--. 1 boinc boinc      8816 Mar  2 03:41 runtime_log.err
[2026-03-02 03:41:03] -rw-------. 1 boinc boinc       654 Mar  2 03:41 fqCODmSAsG9n9Rq4apOajLDm4fhM0noT9bVooX4SDmNn7KDmQmZIVo.diag
[2026-03-02 03:41:03] -rw-r--r--. 1 boinc boinc     20657 Mar  2 03:41 stderr.txt
[2026-03-02 03:41:03] HITS file was successfully produced:
[2026-03-02 03:41:03] -rw-------. 1 boinc boinc 142854800 Mar  2 03:38 shared/HITS.pool.root.1
[2026-03-02 03:41:03]  *** Contents of shared directory: ***
[2026-03-02 03:41:03] total 329268
[2026-03-02 03:41:03] -rw-r--r--. 2 boinc boinc 191692203 Mar  2 00:29 ATLAS.root_0
[2026-03-02 03:41:03] -rw-r--r--. 2 boinc boinc     15845 Mar  2 00:29 start_atlas.sh
[2026-03-02 03:41:03] -rw-r--r--. 2 boinc boinc    597928 Mar  2 00:29 input.tar.gz
[2026-03-02 03:41:03] -rw-------. 1 boinc boinc 142854800 Mar  2 03:38 HITS.pool.root.1
[2026-03-02 03:41:03] -rw-------. 1 boinc boinc   2007040 Mar  2 03:41 result.tar.gz
03:41:05 (21975): run_atlas exited; CPU time 39766.250960
03:41:05 (21975): called boinc_finish(0)

</stderr_txt>
]]>

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