Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
03:43:22 (283905): wrapper (7.7.26015): starting
03:43:22 (283905): wrapper: running run_atlas (--nthreads 12)
[2026-03-01 03:43:22] Arguments: --nthreads 12
[2026-03-01 03:43:22] Threads: 12
[2026-03-01 03:43:22] Checking for CVMFS
[2026-03-01 03:43:23] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-01 03:43:24] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-01 03:43:24] Running cvmfs_config stat atlas.cern.ch
[2026-03-01 03:43:24] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-01 03:43:24] 2.11.5.0 4038285 165045 184056 156768 3 551 43303436 45568000 29043 130560 0 1508219851 99.805 869244552 18435 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2026-03-01 03:43:24] CVMFS is ok
[2026-03-01 03:43:24] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-01 03:43:24] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-01 03:43:24] Further information can be found at the LHC@home message board.
[2026-03-01 03:43:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-01 03:43:24] Checking for apptainer binary...
[2026-03-01 03:43:24] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-01 03:43:24] Running /usr/bin/apptainer --version
[2026-03-01 03:43:24] apptainer version 1.4.1-1.el9
[2026-03-01 03:43:24] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-01 03:43:24] wns0061.triumf.lcg
[2026-03-01 03:43:24] apptainer works
[2026-03-01 03:43:24] Set ATHENA_PROC_NUMBER=12
[2026-03-01 03:43:24] Set ATHENA_CORE_NUMBER=12
[2026-03-01 03:43:24] Starting ATLAS job with PandaID=7034641695
[2026-03-01 03:43:24] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-01 03:48:10]  *** The last 200 lines of the pilot log: ***
[2026-03-01 03:48:10] 2026-03-01 11:47:16,369 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-01 03:48:10] 2026-03-01 11:47:16,370 | WARNING  | wrong length of table data, x=[1772365491.0], y=[2164.0] (must be same and length>=4)
[2026-03-01 03:48:10] 2026-03-01 11:47:16,370 | INFO     | could have reported an average CPU frequency of 2800 MHz (4 samples)
[2026-03-01 03:48:10] 2026-03-01 11:47:16,370 | INFO     | ..............................
[2026-03-01 03:48:10] 2026-03-01 11:47:16,370 | INFO     | . Timing measurements:
[2026-03-01 03:48:10] 2026-03-01 11:47:16,370 | INFO     | . get job = 0 s
[2026-03-01 03:48:10] 2026-03-01 11:47:16,370 | INFO     | . initial setup = 19 s
[2026-03-01 03:48:10] 2026-03-01 11:47:16,370 | INFO     | . payload setup = 17 s
[2026-03-01 03:48:10] 2026-03-01 11:47:16,370 | INFO     | . stage-in = 0 s
[2026-03-01 03:48:10] 2026-03-01 11:47:16,370 | INFO     | . payload execution = 39 s
[2026-03-01 03:48:10] 2026-03-01 11:47:16,370 | INFO     | . stage-out = 0 s
[2026-03-01 03:48:10] 2026-03-01 11:47:16,371 | INFO     | . log creation = 0 s
[2026-03-01 03:48:10] 2026-03-01 11:47:16,371 | INFO     | ..............................
[2026-03-01 03:48:10] 2026-03-01 11:47:16,371 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-03-01 03:48:10] 2026-03-01 11:47:16,371 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7034641695/pilotlog.txt
[2026-03-01 03:48:10] 2026-03-01 11:47:16,476 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-03-01 03:48:10] - Log from pilotlog.txt -
[2026-03-01 03:48:10] 2026-03-01 11:47:16,368 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-7034641695/memory_monitor_summary.json (trf name=prmon)
[2026-03-01 03:48:10] 2026-03-01 11:47:16,369 | INFO     | extracted standard info from prmon json
[2026-03-01 03:48:10] 2026-03-01 11:47:16,369 | INFO     | extracted standard memory fields from prmon json
[2026-03-01 03:48:10] 2026-03-01 11:47:16,369 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-01 03:48:10] 2026-03-01 11:47:16,369 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-01 03:48:10] 2026-03-01 11:47:16,369 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-01 03:48:10] 2026-03-01 11:47:16,370 | WARNING  | wrong length of table data, x=[1772365491.0], y=[2164.0] (must be same and length>=4)
[2026-03-01 03:48:10] 2026-03-01 11:47:16,370 | INFO     | could have reported an average CPU frequency of 2800 MHz (4 samples)
[2026-03-01 03:48:10] 2026-03-01 11:47:16,370 | INFO     | ..............................
[2026-03-01 03:48:10] 2026-03-01 11:47:16,370 | INFO     | . Timing measurements:
[2026-03-01 03:48:10] 2026-03-01 11:47:16,370 | INFO     | . get job = 0 s
[2026-03-01 03:48:10] 2026-03-01 11:47:16,370 | INFO     | . initial setup = 19 s
[2026-03-01 03:48:10] 2026-03-01 11:47:16,370 | INFO     | . payload setup = 17 s
[2026-03-01 03:48:10] 2026-03-01 11:47:16,370 | INFO     | . stage-in = 0 s
[2026-03-01 03:48:10] 2026-03-01 11:47:16,370 | INFO     | . payload execution = 39 s
[2026-03-01 03:48:10] 2026-03-01 11:47:16,370 | INFO     | . stage-out = 0 s
[2026-03-01 03:48:10] 2026-03-01 11:47:16,371 | INFO     | . log creation = 0 s
[2026-03-01 03:48:10] 2026-03-01 11:47:16,371 | INFO     | ..............................
[2026-03-01 03:48:10] 2026-03-01 11:47:16,371 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-03-01 03:48:10] 2026-03-01 11:47:16,371 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7034641695/pilotlog.txt
[2026-03-01 03:48:10] 2026-03-01 11:47:16,476 | WARNING  | 
[2026-03-01 03:48:10] [begin log extracts]
[2026-03-01 03:48:10] - Log from pilotlog.txt -
[2026-03-01 03:48:10] 2026-03-01 11:47:16,368 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-7034641695/memory_monitor_summary.json (trf name=prmon)
[2026-03-01 03:48:10] 2026-03-01 11:47:16,369 | INFO     | extracted standard info from prmon json
[2026-03-01 03:48:10] 2026-03-01 11:47:16,369 | INFO     | extracted standard memory fields from prmon json
[2026-03-01 03:48:10] 2026-03-01 11:47:16,369 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-01 03:48:10] 2026-03-01 11:47:16,369 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-01 03:48:10] 2026-03-01 11:47:16,369 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-01 03:48:10] 2026-03-01 11:47:16,370 | WARNING  | wrong length of table data, x=[1772365491.0], y=[2164.0] (must be same and length>=4)
[2026-03-01 03:48:10] 2026-03-01 11:47:16,370 | INFO     | could have reported an average CPU frequency of 2800 MHz (4 samples)
[2026-03-01 03:48:10] 2026-03-01 11:47:16,370 | INFO     | ..............................
[2026-03-01 03:48:10] 2026-03-01 11:47:16,370 | INFO     | . Timing measurements:
[2026-03-01 03:48:10] 2026-03-01 11:47:16,370 | INFO     | . get job = 0 s
[2026-03-01 03:48:10] 2026-03-01 11:47:16,370 | INFO     | . initial setup = 19 s
[2026-03-01 03:48:10] 2026-03-01 11:47:16,370 | INFO     | . payload setup = 17 s
[2026-03-01 03:48:10] 2026-03-01 11:47:16,370 | INFO     | . stage-in = 0 s
[2026-03-01 03:48:10] 2026-03-01 11:47:16,370 | INFO     | . payload execution = 39 s
[2026-03-01 03:48:10] 2026-03-01 11:47:16,370 | INFO     | . stage-out = 0 s
[2026-03-01 03:48:10] 2026-03-01 11:47:16,371 | INFO     | . log creation = 0 s
[2026-03-01 03:48:10] 2026-03-01 11:47:16,371 | INFO     | ..............................
[2026-03-01 03:48:10] 2026-03-01 11:47:16,371 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-03-01 03:48:10] 2026-03-01 11:47:16,371 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7034641695/pilotlog.txt
[2026-03-01 03:48:10] [end log extracts]
[2026-03-01 03:48:10] 2026-03-01 11:47:16,476 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2026-03-01 03:48:10] 2026-03-01 11:47:16,477 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2026-03-01 03:48:10] 2026-03-01 11:47:16,769 | INFO     | 
[2026-03-01 03:48:10] 2026-03-01 11:47:16,770 | INFO     | job summary report
[2026-03-01 03:48:10] 2026-03-01 11:47:16,770 | INFO     | --------------------------------------------------
[2026-03-01 03:48:10] 2026-03-01 11:47:16,770 | INFO     | PanDA job id: 7034641695
[2026-03-01 03:48:10] 2026-03-01 11:47:16,770 | INFO     | task id: 48700922
[2026-03-01 03:48:10] 2026-03-01 11:47:16,770 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-03-01 03:45:09,025 CRITICAL Transform executor raised TransformValidationExceptio
[2026-03-01 03:48:10] 2026-03-01 11:47:16,770 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-01 03:48:10] 2026-03-01 11:47:16,770 | INFO     | pilot state: failed 
[2026-03-01 03:48:10] 2026-03-01 11:47:16,770 | INFO     | transexitcode: 65
[2026-03-01 03:48:10] 2026-03-01 11:47:16,770 | INFO     | exeerrorcode: 65
[2026-03-01 03:48:10] 2026-03-01 11:47:16,770 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2026-03-01 03:48:10] 2026-03-01 11:47:16,770 | INFO     | exitcode: 65
[2026-03-01 03:48:10] 2026-03-01 11:47:16,770 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2026-03-01 03:48:10] 2026-03-01 11:47:16,770 | INFO     | cpuconsumptiontime: 13 s
[2026-03-01 03:48:10] 2026-03-01 11:47:16,770 | INFO     | nevents: 0
[2026-03-01 03:48:10] 2026-03-01 11:47:16,770 | INFO     | neventsw: 0
[2026-03-01 03:48:10] 2026-03-01 11:47:16,770 | INFO     | pid: 292372
[2026-03-01 03:48:10] 2026-03-01 11:47:16,770 | INFO     | pgrp: 292372
[2026-03-01 03:48:10] 2026-03-01 11:47:16,770 | INFO     | corecount: 12
[2026-03-01 03:48:10] 2026-03-01 11:47:16,771 | INFO     | event service: False
[2026-03-01 03:48:10] 2026-03-01 11:47:16,771 | INFO     | sizes: {0: 2281775, 1: 2282236, 12: 2282236, 60: 2305541, 61: 2305517, 62: 2309993, 180: 2310131}
[2026-03-01 03:48:10] 2026-03-01 11:47:16,771 | INFO     | --------------------------------------------------
[2026-03-01 03:48:10] 2026-03-01 11:47:16,771 | INFO     | 
[2026-03-01 03:48:10] 2026-03-01 11:47:16,771 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2026-03-01 03:48:10] 2026-03-01 11:47:16,860 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-01 03:48:10] 2026-03-01 11:47:16,860 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-01 03:48:10] 2026-03-01 11:47:16,860 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-01 03:48:10] 2026-03-01 11:47:16,860 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-01 03:48:10] 2026-03-01 11:47:16,860 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-01 03:48:10] 2026-03-01 11:47:16,860 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-01 03:48:10] 2026-03-01 11:47:16,860 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-01 03:48:10] 2026-03-01 11:47:16,860 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-01 03:48:10] 2026-03-01 11:47:16,860 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-01 03:48:10] 2026-03-01 11:47:16,860 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-01 03:48:10] 2026-03-01 11:47:16,860 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-01 03:48:10] 2026-03-01 11:47:16,860 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-01 03:48:10] 2026-03-01 11:47:16,860 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-01 03:48:10] 2026-03-01 11:47:16,861 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-01 03:48:10] 2026-03-01 11:47:16,861 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-01 03:48:10] 2026-03-01 11:47:16,861 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-01 03:48:10] 2026-03-01 11:47:16,861 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-01 03:48:10] 2026-03-01 11:47:16,861 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-01 03:48:10] 2026-03-01 11:47:16,861 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-01 03:48:10] 2026-03-01 11:47:16,861 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-01 03:48:10] 2026-03-01 11:47:16,861 | INFO     | job 7034641695 has completed (purged errors)
[2026-03-01 03:48:10] 2026-03-01 11:47:16,861 | INFO     | overall cleanup function is called
[2026-03-01 03:48:10] 2026-03-01 11:47:17,867 | INFO     | --- collectZombieJob: --- 10, [292372]
[2026-03-01 03:48:10] 2026-03-01 11:47:17,868 | INFO     | zombie collector waiting for pid 292372
[2026-03-01 03:48:10] 2026-03-01 11:47:17,868 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-01 03:48:10] 2026-03-01 11:47:17,868 | INFO     | collected zombie processes
[2026-03-01 03:48:10] 2026-03-01 11:47:17,868 | INFO     | will attempt to kill all subprocesses of pid=292372
[2026-03-01 03:48:10] 2026-03-01 11:47:18,285 | INFO     | process IDs to be killed: [292372] (in reverse order)
[2026-03-01 03:48:10] 2026-03-01 11:47:18,573 | WARNING  | found no corresponding commands to process id(s)
[2026-03-01 03:48:10] 2026-03-01 11:47:18,573 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-01 03:48:10] 2026-03-01 11:47:18,583 | INFO     | did not find any defunct processes belonging to 292372
[2026-03-01 03:48:10] 2026-03-01 11:47:18,591 | INFO     | did not find any defunct processes belonging to 292372
[2026-03-01 03:48:10] 2026-03-01 11:47:18,592 | INFO     | ready for new job
[2026-03-01 03:48:10] 2026-03-01 11:47:18,592 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-01 03:48:10] 2026-03-01 11:47:18,593 | INFO     | **************************************
[2026-03-01 03:48:10] 2026-03-01 11:47:18,593 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-01 03:48:10] 2026-03-01 11:47:18,593 | INFO     | **************************************
[2026-03-01 03:48:10] 2026-03-01 11:47:18,593 | INFO     | 
[2026-03-01 03:48:10] 2026-03-01 11:47:18,595 | INFO     | architecture information:
[2026-03-01 03:48:10] 2026-03-01 11:47:18,595 | INFO     | executing command: cat /etc/os-release
[2026-03-01 03:48:10] 2026-03-01 11:47:18,606 | INFO     | cat /etc/os-release:
[2026-03-01 03:48:10] NAME="CentOS Linux"
[2026-03-01 03:48:10] VERSION="7 (Core)"
[2026-03-01 03:48:10] ID="centos"
[2026-03-01 03:48:10] ID_LIKE="rhel fedora"
[2026-03-01 03:48:10] VERSION_ID="7"
[2026-03-01 03:48:10] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-01 03:48:10] ANSI_COLOR="0;31"
[2026-03-01 03:48:10] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-01 03:48:10] HOME_URL="https://www.centos.org/"
[2026-03-01 03:48:10] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-01 03:48:10] 
[2026-03-01 03:48:10] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-01 03:48:10] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-01 03:48:10] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-01 03:48:10] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-01 03:48:10] 
[2026-03-01 03:48:10] 2026-03-01 11:47:18,606 | INFO     | **************************************
[2026-03-01 03:48:10] 2026-03-01 11:47:19,109 | INFO     | executing command: df -mP /home/boinc/slots/0
[2026-03-01 03:48:10] 2026-03-01 11:47:19,120 | INFO     | sufficient remaining disk space (2212286693376 B)
[2026-03-01 03:48:10] 2026-03-01 11:47:19,120 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-01 03:48:10] 2026-03-01 11:47:19,121 | INFO     | current server update state: UPDATING_FINAL
[2026-03-01 03:48:10] 2026-03-01 11:47:19,121 | INFO     | update_server=False
[2026-03-01 03:48:10] 2026-03-01 11:47:19,121 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-01 03:48:10] 2026-03-01 11:47:19,121 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-01 03:48:10] 2026-03-01 11:47:19,298 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-01 03:48:10] 2026-03-01 11:47:19,299 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-01 03:48:10] 2026-03-01 11:47:19,299 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-01 03:48:10] 2026-03-01 11:47:19,299 | INFO     | will abort loop
[2026-03-01 03:48:10] 2026-03-01 11:47:19,581 | INFO     | all payload control threads have been joined
[2026-03-01 03:48:10] 2026-03-01 11:47:19,892 | INFO     | all job control threads have been joined
[2026-03-01 03:48:10] 2026-03-01 11:47:19,997 | INFO     | all data control threads have been joined
[2026-03-01 03:48:10] 2026-03-01 11:47:20,119 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-01 03:48:10] 2026-03-01 11:47:20,130 | INFO     | [job] retrieve thread has finished
[2026-03-01 03:48:10] 2026-03-01 11:47:20,147 | INFO     | [data] copytool_in thread has finished
[2026-03-01 03:48:10] 2026-03-01 11:47:20,250 | INFO     | [payload] execute_payloads thread has finished
[2026-03-01 03:48:10] 2026-03-01 11:47:20,304 | INFO     | [job] job monitor thread has finished
[2026-03-01 03:48:10] 2026-03-01 11:47:20,566 | INFO     | [payload] validate_post thread has finished
[2026-03-01 03:48:10] 2026-03-01 11:47:20,590 | INFO     | [payload] control thread has finished
[2026-03-01 03:48:10] 2026-03-01 11:47:20,686 | INFO     | [job] validate thread has finished
[2026-03-01 03:48:10] 2026-03-01 11:47:20,755 | INFO     | [job] create_data_payload thread has finished
[2026-03-01 03:48:10] 2026-03-01 11:47:20,899 | INFO     | [job] control thread has finished
[2026-03-01 03:48:10] 2026-03-01 11:47:21,002 | INFO     | [data] control thread has finished
[2026-03-01 03:48:10] 2026-03-01 11:47:21,160 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-01 03:48:10] 2026-03-01 11:47:21,233 | INFO     | [payload] failed_post thread has finished
[2026-03-01 03:48:10] 2026-03-01 11:47:21,482 | INFO     | [payload] validate_pre thread has finished
[2026-03-01 03:48:10] 2026-03-01 11:47:21,740 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-01 03:48:10] 2026-03-01 11:47:22,135 | INFO     | [data] copytool_out thread has finished
[2026-03-01 03:48:10] 2026-03-01 11:47:22,749 | INFO     | [job] queue monitor thread has finished
[2026-03-01 03:48:10] 2026-03-01 11:47:23,139 | INFO     | [data] queue_monitor thread has finished
[2026-03-01 03:48:10] 2026-03-01 11:47:50,111 | INFO     | PID=287620 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-01 03:48:10] 2026-03-01 11:47:50,112 | INFO     | .. there are 48 such processes running
[2026-03-01 03:48:10] 2026-03-01 11:47:50,112 | INFO     | found 0 job(s) in 20 queues
[2026-03-01 03:48:10] 2026-03-01 11:47:50,112 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-01 03:48:10] 2026-03-01 11:47:50,112 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-01 03:48:10] 2026-03-01 11:48:04,723 | INFO     | [monitor] cgroup control has ended
[2026-03-01 03:48:10] 2026-03-01 11:48:05,275 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139857118394176)>', '<ExcThread(monitor, started 139856701265664)>']
[2026-03-01 03:48:10] 2026-03-01 11:48:06,208 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-01 03:48:10] 2026-03-01 11:48:06,209 | INFO     | [monitor] control thread has ended
[2026-03-01 03:48:10] 2026-03-01 11:48:10,301 | INFO     | all workflow threads have been joined
[2026-03-01 03:48:10] 2026-03-01 11:48:10,302 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-01 03:48:10] 2026-03-01 11:48:10,302 | INFO     | traces error code: 0
[2026-03-01 03:48:10] 2026-03-01 11:48:10,302 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-01 03:48:10] 2026-03-01 11:48:10,562 [wrapper] ==== pilot stdout END ====
[2026-03-01 03:48:10] 2026-03-01 11:48:10,564 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-01 03:48:10] 2026-03-01 11:48:10,566 [wrapper] pilotpid: 287620
[2026-03-01 03:48:10] 2026-03-01 11:48:10,567 [wrapper] Pilot exit status: 0
[2026-03-01 03:48:10] 2026-03-01 11:48:10,576 [wrapper] pandaids: 7034641695
[2026-03-01 03:48:10] 2026-03-01 11:48:10,628 [wrapper] cleanup supervisor_pilot  287626 287621
[2026-03-01 03:48:10] 2026-03-01 11:48:10,630 [wrapper] Test setup, not cleaning
[2026-03-01 03:48:10] 2026-03-01 11:48:10,632 [wrapper] apfmon messages muted
[2026-03-01 03:48:10] 2026-03-01 11:48:10,633 [wrapper] ==== wrapper stdout END ====
[2026-03-01 03:48:10] 2026-03-01 11:48:10,635 [wrapper] ==== wrapper stderr END ====
[2026-03-01 03:48:10]  *** Error codes and diagnostics ***
[2026-03-01 03:48:10]     "exeErrorCode": 65,
[2026-03-01 03:48:10]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2026-03-01 03:48:10]     "pilotErrorCode": 1305,
[2026-03-01 03:48:10]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2026-03-01 03:48:10]  *** Listing of results directory ***
[2026-03-01 03:48:10] total 191236
[2026-03-01 03:48:10] -rw-r--r--. 1 boinc boinc    584627 Mar  1 01:10 pilot3.tar.gz
[2026-03-01 03:48:10] -rwx------. 1 boinc boinc     36322 Mar  1 01:21 runpilot2-wrapper.sh
[2026-03-01 03:48:10] -rw-r--r--. 1 boinc boinc      5111 Mar  1 01:23 queuedata.json
[2026-03-01 03:48:10] -rw-r--r--. 1 boinc boinc       100 Mar  1 03:43 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-01 03:48:10] -rwxr-xr-x. 1 boinc boinc      7986 Mar  1 03:43 run_atlas
[2026-03-01 03:48:10] -rw-r--r--. 1 boinc boinc       105 Mar  1 03:43 job.xml
[2026-03-01 03:48:10] -rw-r--r--. 2 boinc boinc 191692203 Mar  1 03:43 EVNT.48700920._000084.pool.root.1
[2026-03-01 03:48:10] -rw-r--r--. 2 boinc boinc    597931 Mar  1 03:43 input.tar.gz
[2026-03-01 03:48:10] -rw-r--r--. 1 boinc boinc      6594 Mar  1 03:43 init_data.xml
[2026-03-01 03:48:10] -rw-r--r--. 2 boinc boinc     15845 Mar  1 03:43 start_atlas.sh
[2026-03-01 03:48:10] drwxrwx--x. 2 boinc boinc      4096 Mar  1 03:43 shared
[2026-03-01 03:48:10] -rw-r--r--. 1 boinc boinc         0 Mar  1 03:43 boinc_lockfile
[2026-03-01 03:48:10] -rw-r--r--. 1 boinc boinc      2516 Mar  1 03:43 pandaJob.out
[2026-03-01 03:48:10] -rw-------. 1 boinc boinc    998184 Mar  1 03:43 agis_schedconf.cvmfs.json
[2026-03-01 03:48:10] -rw-------. 1 boinc boinc   1513015 Mar  1 03:43 agis_ddmendpoints.agis.ALL.json
[2026-03-01 03:48:10] -rw-------. 1 boinc boinc       438 Mar  1 03:44 workernode_map.json
[2026-03-01 03:48:10] drwx------. 5 boinc boinc      4096 Mar  1 03:44 pilot3
[2026-03-01 03:48:10] -rw-------. 1 boinc boinc       952 Mar  1 03:45 memory_monitor_summary.json
[2026-03-01 03:48:10] -rw-------. 1 boinc boinc     21292 Mar  1 03:45 log.48700922._002113.job.log.tgz.1
[2026-03-01 03:48:10] -rw-------. 1 boinc boinc      7029 Mar  1 03:47 heartbeat.json
[2026-03-01 03:48:10] -rw-------. 1 boinc boinc        95 Mar  1 03:47 pilot_heartbeat.json
[2026-03-01 03:48:10] -rw-r--r--. 1 boinc boinc       523 Mar  1 03:47 boinc_task_state.xml
[2026-03-01 03:48:10] -rw-r--r--. 1 boinc boinc        22 Mar  1 03:48 wrapper_checkpoint.txt
[2026-03-01 03:48:10] -rw-r--r--. 1 boinc boinc      8192 Mar  1 03:48 boinc_mmap_file
[2026-03-01 03:48:10] -rw-------. 1 boinc boinc      5004 Mar  1 03:48 pilotlog.txt
[2026-03-01 03:48:10] -rw-------. 1 boinc boinc     84744 Mar  1 03:48 log.48700922._002113.job.log.1
[2026-03-01 03:48:10] -rw-------. 1 boinc boinc       188 Mar  1 03:48 output.list
[2026-03-01 03:48:10] -rw-r--r--. 1 boinc boinc       620 Mar  1 03:48 runtime_log
[2026-03-01 03:48:10] -rw-------. 1 boinc boinc    122880 Mar  1 03:48 result.tar.gz
[2026-03-01 03:48:10] -rw-------. 1 boinc boinc       643 Mar  1 03:48 X28NDmSAsG9n9Rq4apOajLDm4fhM0noT9bVooX4SDmLn7KDmUrUiWn.diag
[2026-03-01 03:48:10] -rw-r--r--. 1 boinc boinc      8635 Mar  1 03:48 runtime_log.err
[2026-03-01 03:48:10] -rw-r--r--. 1 boinc boinc     21800 Mar  1 03:48 stderr.txt
[2026-03-01 03:48:10] No HITS result produced
[2026-03-01 03:48:10]  *** Contents of shared directory: ***
[2026-03-01 03:48:10] total 187924
[2026-03-01 03:48:10] -rw-r--r--. 2 boinc boinc 191692203 Mar  1 03:43 ATLAS.root_0
[2026-03-01 03:48:10] -rw-r--r--. 2 boinc boinc    597931 Mar  1 03:43 input.tar.gz
[2026-03-01 03:48:10] -rw-r--r--. 2 boinc boinc     15845 Mar  1 03:43 start_atlas.sh
[2026-03-01 03:48:10] -rw-------. 1 boinc boinc    122880 Mar  1 03:48 result.tar.gz
03:48:12 (283905): run_atlas exited; CPU time 20.042087
03:48:12 (283905): called boinc_finish(0)

</stderr_txt>
]]>

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