Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
12:33:44 (3860678): wrapper (7.7.26015): starting
12:33:44 (3860678): wrapper: running run_atlas (--nthreads 4)
[2026-03-02 12:33:44] Arguments: --nthreads 4
[2026-03-02 12:33:44] Threads: 4
[2026-03-02 12:33:44] Checking for CVMFS
[2026-03-02 12:33:44] No cvmfs_config command found, will try listing directly
[2026-03-02 12:33:44] CVMFS is ok
[2026-03-02 12:33:44] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-02 12:33:44] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-02 12:33:44] Further information can be found at the LHC@home message board.
[2026-03-02 12:33:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-02 12:33:44] Checking for apptainer binary...
[2026-03-02 12:33:44] which: no apptainer in ((null))
[2026-03-02 12:33:44] apptainer is not installed, using version from CVMFS
[2026-03-02 12:33:44] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-02 12:33:44] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot84/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut21.grid.cesnet.cz
[2026-03-02 12:33:44] apptainer works
[2026-03-02 12:33:44] Set ATHENA_PROC_NUMBER=4
[2026-03-02 12:33:44] Set ATHENA_CORE_NUMBER=4
[2026-03-02 12:33:44] Starting ATLAS job with PandaID=7034261184
[2026-03-02 12:33:44] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot84/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-02 13:39:09]  *** The last 200 lines of the pilot log: ***
[2026-03-02 13:39:09]  status=None
[2026-03-02 13:39:09]  status_code=0
[2026-03-02 13:39:09]  storage_token=
[2026-03-02 13:39:09]  surl=/var/lib/boinc/var/slot84/slots/0/PanDA_Pilot-7034261184/log.48700938._001324.job.log.tgz.1
[2026-03-02 13:39:09]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b1/4a/log.48700938._001324.job.log.tgz.1
[2026-03-02 13:39:09]  workdir=None
[2026-03-02 13:39:09] ]
[2026-03-02 13:39:09] 2026-03-02 12:38:09,256 | INFO     | transferring file log.48700938._001324.job.log.tgz.1 from /var/lib/boinc/var/slot84/slots/0/PanDA_Pilot-7034261184/log.48700938._001324.job.log.tgz.1 to /var/lib/b
[2026-03-02 13:39:09] 2026-03-02 12:38:09,256 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot84/slots/0/PanDA_Pilot-7034261184/log.48700938._001324.job.log.tgz.1 /var/lib/boinc/var/slot84/slots/0/lo
[2026-03-02 13:39:09] 2026-03-02 12:38:09,271 | INFO     | adding to output.list: log.48700938._001324.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b1/4a/log.48700938._001324.job.log.tg
[2026-03-02 13:39:09] 2026-03-02 12:38:09,271 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-02 13:39:09] 2026-03-02 12:38:09,271 | INFO     | summary of transferred files:
[2026-03-02 13:39:09] 2026-03-02 12:38:09,271 | INFO     |  -- lfn=log.48700938._001324.job.log.tgz.1, status_code=0, status=transferred
[2026-03-02 13:39:09] 2026-03-02 12:38:09,271 | INFO     | stage-out finished correctly
[2026-03-02 13:39:09] 2026-03-02 12:38:10,765 | INFO     | time since job start (3854s) is within the limit (349056.0s)
[2026-03-02 13:39:09] 2026-03-02 12:38:10,799 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-02 13:39:09] 2026-03-02 12:38:10,846 | INFO     | job 7034261184 has state=finished
[2026-03-02 13:39:09] 2026-03-02 12:38:10,846 | INFO     | preparing for final server update for job 7034261184 in state='finished'
[2026-03-02 13:39:09] 2026-03-02 12:38:10,847 | INFO     | reading metadata from: /var/lib/boinc/var/slot84/slots/0/PanDA_Pilot-7034261184/jobReport.json
[2026-03-02 13:39:09] 2026-03-02 12:38:10,848 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot84/slots/0/workernode_map.json
[2026-03-02 13:39:09] 2026-03-02 12:38:10,848 | INFO     | this job has now completed (state=finished)
[2026-03-02 13:39:09] 2026-03-02 12:38:10,848 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-02 13:39:09] 2026-03-02 12:38:10,848 | INFO     | log transfer has been attempted: DONE
[2026-03-02 13:39:09] 2026-03-02 12:38:10,848 | INFO     | job 7034261184 has finished - writing final server update
[2026-03-02 13:39:09] 2026-03-02 12:38:10,849 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_17731/.job.ad'
[2026-03-02 13:39:09] 2026-03-02 12:38:10,849 | INFO     | total number of processed events: 400 (read)
[2026-03-02 13:39:09] 2026-03-02 12:38:10,866 | INFO     | using path: /var/lib/boinc/var/slot84/slots/0/PanDA_Pilot-7034261184/memory_monitor_summary.json (trf name=prmon)
[2026-03-02 13:39:09] 2026-03-02 12:38:10,867 | INFO     | extracted standard info from prmon json
[2026-03-02 13:39:09] 2026-03-02 12:38:10,867 | INFO     | extracted standard memory fields from prmon json
[2026-03-02 13:39:09] 2026-03-02 12:38:10,867 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-02 13:39:09] 2026-03-02 12:38:10,867 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-02 13:39:09] 2026-03-02 12:38:10,867 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-02 13:39:09] 2026-03-02 12:38:10,868 | INFO     | fitting pss+swap vs Time
[2026-03-02 13:39:09] 2026-03-02 12:38:10,868 | INFO     | sum of square deviations: 54438230.0
[2026-03-02 13:39:09] 2026-03-02 12:38:10,868 | INFO     | sum of deviations: 17162624.5
[2026-03-02 13:39:09] 2026-03-02 12:38:10,868 | INFO     | mean x: 1772453239.5
[2026-03-02 13:39:09] 2026-03-02 12:38:10,868 | INFO     | mean y: 2328251.375
[2026-03-02 13:39:09] 2026-03-02 12:38:10,868 | INFO     | intersect: -556469295.7411915
[2026-03-02 13:39:09] 2026-03-02 12:38:10,868 | INFO     | chi2: 3.986257521387345e-05
[2026-03-02 13:39:09] 2026-03-02 12:38:10,868 | INFO     | current memory leak: 0.32 B/s (using 56 data points, chi2=0.00)
[2026-03-02 13:39:09] 2026-03-02 12:38:10,869 | INFO     | could have reported an average CPU frequency of 3595 MHz (6 samples)
[2026-03-02 13:39:09] 2026-03-02 12:38:10,869 | INFO     | ..............................
[2026-03-02 13:39:09] 2026-03-02 12:38:10,869 | INFO     | . Timing measurements:
[2026-03-02 13:39:09] 2026-03-02 12:38:10,869 | INFO     | . get job = 0 s
[2026-03-02 13:39:09] 2026-03-02 12:38:10,869 | INFO     | . initial setup = 5 s
[2026-03-02 13:39:09] 2026-03-02 12:38:10,869 | INFO     | . payload setup = 5 s
[2026-03-02 13:39:09] 2026-03-02 12:38:10,869 | INFO     | . stage-in = 0 s
[2026-03-02 13:39:09] 2026-03-02 12:38:10,869 | INFO     | . payload execution = 3831 s
[2026-03-02 13:39:09] 2026-03-02 12:38:10,869 | INFO     | . stage-out = 0 s
[2026-03-02 13:39:09] 2026-03-02 12:38:10,869 | INFO     | . log creation = 0 s
[2026-03-02 13:39:09] 2026-03-02 12:38:10,869 | INFO     | ..............................
[2026-03-02 13:39:09] 2026-03-02 12:38:11,261 | INFO     | 
[2026-03-02 13:39:09] 2026-03-02 12:38:11,261 | INFO     | job summary report
[2026-03-02 13:39:09] 2026-03-02 12:38:11,261 | INFO     | --------------------------------------------------
[2026-03-02 13:39:09] 2026-03-02 12:38:11,261 | INFO     | PanDA job id: 7034261184
[2026-03-02 13:39:09] 2026-03-02 12:38:11,261 | INFO     | task id: 48700938
[2026-03-02 13:39:09] 2026-03-02 12:38:11,261 | INFO     | errors: (none)
[2026-03-02 13:39:09] 2026-03-02 12:38:11,261 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-02 13:39:09] 2026-03-02 12:38:11,261 | INFO     | pilot state: finished 
[2026-03-02 13:39:09] 2026-03-02 12:38:11,261 | INFO     | transexitcode: 0
[2026-03-02 13:39:09] 2026-03-02 12:38:11,261 | INFO     | exeerrorcode: 0
[2026-03-02 13:39:09] 2026-03-02 12:38:11,261 | INFO     | exeerrordiag: 
[2026-03-02 13:39:09] 2026-03-02 12:38:11,261 | INFO     | exitcode: 0
[2026-03-02 13:39:09] 2026-03-02 12:38:11,261 | INFO     | exitmsg: OK
[2026-03-02 13:39:09] 2026-03-02 12:38:11,261 | INFO     | cpuconsumptiontime: 14696 s
[2026-03-02 13:39:09] 2026-03-02 12:38:11,261 | INFO     | nevents: 400
[2026-03-02 13:39:09] 2026-03-02 12:38:11,261 | INFO     | neventsw: 0
[2026-03-02 13:39:09] 2026-03-02 12:38:11,261 | INFO     | pid: 3871741
[2026-03-02 13:39:09] 2026-03-02 12:38:11,261 | INFO     | pgrp: 3871741
[2026-03-02 13:39:09] 2026-03-02 12:38:11,261 | INFO     | corecount: 4
[2026-03-02 13:39:09] 2026-03-02 12:38:11,261 | INFO     | event service: False
[2026-03-02 13:39:09] 2026-03-02 12:38:11,261 | INFO     | sizes: {0: 2282203, 11: 2282203, 3839: 2308034, 3841: 2317054, 3843: 2317304}
[2026-03-02 13:39:09] 2026-03-02 12:38:11,261 | INFO     | --------------------------------------------------
[2026-03-02 13:39:09] 2026-03-02 12:38:11,262 | INFO     | 
[2026-03-02 13:39:09] 2026-03-02 12:38:11,262 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot84/slots/0
[2026-03-02 13:39:09] 2026-03-02 12:38:11,282 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-02 13:39:09] 2026-03-02 12:38:11,282 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-02 13:39:09] 2026-03-02 12:38:11,282 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-02 13:39:09] 2026-03-02 12:38:11,282 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-02 13:39:09] 2026-03-02 12:38:11,282 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-02 13:39:09] 2026-03-02 12:38:11,282 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-02 13:39:09] 2026-03-02 12:38:11,282 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-02 13:39:09] 2026-03-02 12:38:11,282 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-02 13:39:09] 2026-03-02 12:38:11,282 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-02 13:39:09] 2026-03-02 12:38:11,282 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-02 13:39:09] 2026-03-02 12:38:11,282 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-02 13:39:09] 2026-03-02 12:38:11,282 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-02 13:39:09] 2026-03-02 12:38:11,282 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-02 13:39:09] 2026-03-02 12:38:11,282 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-02 13:39:09] 2026-03-02 12:38:11,282 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-02 13:39:09] 2026-03-02 12:38:11,282 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-02 13:39:09] 2026-03-02 12:38:11,282 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-02 13:39:09] 2026-03-02 12:38:11,283 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-02 13:39:09] 2026-03-02 12:38:11,283 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-02 13:39:09] 2026-03-02 12:38:11,283 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-02 13:39:09] 2026-03-02 12:38:11,283 | INFO     | job 7034261184 has completed (purged errors)
[2026-03-02 13:39:09] 2026-03-02 12:38:11,283 | INFO     | overall cleanup function is called
[2026-03-02 13:39:09] 2026-03-02 12:38:12,289 | INFO     | --- collectZombieJob: --- 10, [3871741]
[2026-03-02 13:39:09] 2026-03-02 12:38:12,290 | INFO     | zombie collector waiting for pid 3871741
[2026-03-02 13:39:09] 2026-03-02 12:38:12,290 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-02 13:39:09] 2026-03-02 12:38:12,290 | INFO     | collected zombie processes
[2026-03-02 13:39:09] 2026-03-02 12:38:12,290 | INFO     | will attempt to kill all subprocesses of pid=3871741
[2026-03-02 13:39:09] 2026-03-02 12:38:12,801 | INFO     | process IDs to be killed: [3871741] (in reverse order)
[2026-03-02 13:39:09] 2026-03-02 12:38:13,015 | WARNING  | found no corresponding commands to process id(s)
[2026-03-02 13:39:09] 2026-03-02 12:38:13,015 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-02 13:39:09] 2026-03-02 12:38:13,045 | INFO     | did not find any defunct processes belonging to 3871741
[2026-03-02 13:39:09] 2026-03-02 12:38:13,074 | INFO     | did not find any defunct processes belonging to 3871741
[2026-03-02 13:39:09] 2026-03-02 12:38:13,074 | INFO     | ready for new job
[2026-03-02 13:39:09] 2026-03-02 12:38:13,074 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-02 13:39:09] 2026-03-02 12:38:13,076 | INFO     | **************************************
[2026-03-02 13:39:09] 2026-03-02 12:38:13,076 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-02 13:39:09] 2026-03-02 12:38:13,076 | INFO     | **************************************
[2026-03-02 13:39:09] 2026-03-02 12:38:13,076 | INFO     | 
[2026-03-02 13:39:09] 2026-03-02 12:38:13,083 | INFO     | architecture information:
[2026-03-02 13:39:09] 2026-03-02 12:38:13,083 | INFO     | executing command: cat /etc/os-release
[2026-03-02 13:39:09] 2026-03-02 12:38:13,099 | INFO     | cat /etc/os-release:
[2026-03-02 13:39:09] NAME="CentOS Linux"
[2026-03-02 13:39:09] VERSION="7 (Core)"
[2026-03-02 13:39:09] ID="centos"
[2026-03-02 13:39:09] ID_LIKE="rhel fedora"
[2026-03-02 13:39:09] VERSION_ID="7"
[2026-03-02 13:39:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-02 13:39:09] ANSI_COLOR="0;31"
[2026-03-02 13:39:09] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-02 13:39:09] HOME_URL="https://www.centos.org/"
[2026-03-02 13:39:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-02 13:39:09] 
[2026-03-02 13:39:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-02 13:39:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-02 13:39:09] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-02 13:39:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-02 13:39:09] 
[2026-03-02 13:39:09] 2026-03-02 12:38:13,100 | INFO     | **************************************
[2026-03-02 13:39:09] 2026-03-02 12:38:13,602 | INFO     | executing command: df -mP /var/lib/boinc/var/slot84/slots/0
[2026-03-02 13:39:09] 2026-03-02 12:38:13,618 | INFO     | sufficient remaining disk space (20795359232 B)
[2026-03-02 13:39:09] 2026-03-02 12:38:13,618 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-02 13:39:09] 2026-03-02 12:38:13,619 | INFO     | current server update state: UPDATING_FINAL
[2026-03-02 13:39:09] 2026-03-02 12:38:13,619 | INFO     | update_server=False
[2026-03-02 13:39:09] 2026-03-02 12:38:13,619 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-02 13:39:09] 2026-03-02 12:38:13,658 | INFO     | all payload control threads have been joined
[2026-03-02 13:39:09] 2026-03-02 12:38:13,739 | INFO     | all data control threads have been joined
[2026-03-02 13:39:09] 2026-03-02 12:38:14,033 | WARNING  | process 3871741 can no longer be monitored (due to stat problems) - aborting
[2026-03-02 13:39:09] 2026-03-02 12:38:14,362 | INFO     | using path: /var/lib/boinc/var/slot84/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-02 13:39:09] 2026-03-02 12:38:14,363 | INFO     | using path: /var/lib/boinc/var/slot84/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-02 13:39:09] 2026-03-02 12:38:14,363 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-03-02 13:39:09] 2026-03-02 12:38:14,363 | WARNING  | maxPSS not found in memory monitor output
[2026-03-02 13:39:09] 2026-03-02 12:38:14,363 | INFO     | skipping file size check of payload stdout file (/var/lib/boinc/var/slot84/slots/0/PanDA_Pilot-7034261184/payload.stdout) since it has not been created yet
[2026-03-02 13:39:09] 2026-03-02 12:38:14,363 | INFO     | executing command: df -mP /var/lib/boinc/var/slot84/slots/0
[2026-03-02 13:39:09] 2026-03-02 12:38:14,377 | INFO     | sufficient remaining disk space (20792213504 B)
[2026-03-02 13:39:09] 2026-03-02 12:38:14,377 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-03-02 13:39:09] 2026-03-02 12:38:14,378 | INFO     | output file size check: skipping output file /var/lib/boinc/var/slot84/slots/0/PanDA_Pilot-7034261184/HITS.48700938._001324.pool.root.1 since it does not exist
[2026-03-02 13:39:09] 2026-03-02 12:38:14,624 | INFO     | [job] retrieve thread has finished
[2026-03-02 13:39:09] 2026-03-02 12:38:14,650 | INFO     | [payload] execute_payloads thread has finished
[2026-03-02 13:39:09] 2026-03-02 12:38:14,664 | INFO     | [payload] control thread has finished
[2026-03-02 13:39:09] 2026-03-02 12:38:14,744 | INFO     | [data] control thread has finished
[2026-03-02 13:39:09] 2026-03-02 12:38:14,832 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-02 13:39:09] 2026-03-02 12:38:14,896 | INFO     | number of running child processes to parent process 3871741: 1
[2026-03-02 13:39:09] 2026-03-02 12:38:14,896 | INFO     | maximum number of monitored processes: 6
[2026-03-02 13:39:09] 2026-03-02 12:38:14,896 | INFO     | aborting job monitoring since job object (job id=7034261184) has expired
[2026-03-02 13:39:09] 2026-03-02 12:38:14,896 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-02 13:39:09] 2026-03-02 12:38:14,896 | INFO     | will abort loop
[2026-03-02 13:39:09] 2026-03-02 12:38:15,116 | INFO     | [payload] validate_post thread has finished
[2026-03-02 13:39:09] 2026-03-02 12:38:15,141 | INFO     | all job control threads have been joined
[2026-03-02 13:39:09] 2026-03-02 12:38:15,243 | INFO     | [job] validate thread has finished
[2026-03-02 13:39:09] 2026-03-02 12:38:15,245 | INFO     | [payload] failed_post thread has finished
[2026-03-02 13:39:09] 2026-03-02 12:38:15,248 | INFO     | [job] create_data_payload thread has finished
[2026-03-02 13:39:09] 2026-03-02 12:38:15,389 | INFO     | [payload] validate_pre thread has finished
[2026-03-02 13:39:09] 2026-03-02 12:38:15,735 | INFO     | [data] copytool_in thread has finished
[2026-03-02 13:39:09] 2026-03-02 12:38:15,901 | INFO     | [job] job monitor thread has finished
[2026-03-02 13:39:09] 2026-03-02 12:38:15,927 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-02 13:39:09] 2026-03-02 12:38:16,147 | INFO     | [job] control thread has finished
[2026-03-02 13:39:09] 2026-03-02 12:38:16,838 | INFO     | [data] copytool_out thread has finished
[2026-03-02 13:39:09] 2026-03-02 12:38:16,852 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-02 13:39:09] 2026-03-02 12:38:16,932 | INFO     | [job] queue monitor thread has finished
[2026-03-02 13:39:09] 2026-03-02 12:38:20,857 | INFO     | [data] queue_monitor thread has finished
[2026-03-02 13:39:09] 2026-03-02 12:38:23,913 | INFO     | job.realtimelogging is not enabled
[2026-03-02 13:39:09] 2026-03-02 12:38:24,918 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-02 13:39:09] 2026-03-02 12:38:44,395 | INFO     | PID=3865227 has CPU usage=7.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-02 13:39:09] 2026-03-02 12:38:44,395 | INFO     | .. there are 46 such processes running
[2026-03-02 13:39:09] 2026-03-02 12:38:44,396 | INFO     | found 0 job(s) in 20 queues
[2026-03-02 13:39:09] 2026-03-02 12:38:44,396 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-02 13:39:09] 2026-03-02 12:38:44,396 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-02 13:39:09] 2026-03-02 12:39:02,589 | INFO     | [monitor] cgroup control has ended
[2026-03-02 13:39:09] 2026-03-02 12:39:03,726 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23368985057088)>', '<ExcThread(monitor, started 23368744314624)>']
[2026-03-02 13:39:09] 2026-03-02 12:39:04,496 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-02 13:39:09] 2026-03-02 12:39:04,496 | INFO     | [monitor] control thread has ended
[2026-03-02 13:39:09] 2026-03-02 12:39:08,752 | INFO     | all workflow threads have been joined
[2026-03-02 13:39:09] 2026-03-02 12:39:08,752 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-02 13:39:09] 2026-03-02 12:39:08,752 | INFO     | traces error code: 0
[2026-03-02 13:39:09] 2026-03-02 12:39:08,752 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-02 13:39:09] 2026-03-02 12:39:08,937 [wrapper] ==== pilot stdout END ====
[2026-03-02 13:39:09] 2026-03-02 12:39:08,941 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-02 13:39:09] 2026-03-02 12:39:08,944 [wrapper] pilotpid: 3865227
[2026-03-02 13:39:09] 2026-03-02 12:39:08,946 [wrapper] Pilot exit status: 0
[2026-03-02 13:39:09] 2026-03-02 12:39:08,958 [wrapper] pandaids: 7034261184
[2026-03-02 13:39:09] 2026-03-02 12:39:09,094 [wrapper] cleanup supervisor_pilot  211193 3865228
[2026-03-02 13:39:09] 2026-03-02 12:39:09,097 [wrapper] Test setup, not cleaning
[2026-03-02 13:39:09] 2026-03-02 12:39:09,099 [wrapper] apfmon messages muted
[2026-03-02 13:39:09] 2026-03-02 12:39:09,102 [wrapper] ==== wrapper stdout END ====
[2026-03-02 13:39:09] 2026-03-02 12:39:09,104 [wrapper] ==== wrapper stderr END ====
[2026-03-02 13:39:09]  *** Error codes and diagnostics ***
[2026-03-02 13:39:09]     "exeErrorCode": 0,
[2026-03-02 13:39:09]     "exeErrorDiag": "",
[2026-03-02 13:39:09]     "pilotErrorCode": 0,
[2026-03-02 13:39:09]     "pilotErrorDiag": "",
[2026-03-02 13:39:09]  *** Listing of results directory ***
[2026-03-02 13:39:09] total 336612
[2026-03-02 13:39:09] -rw-r--r--. 1 boinc boinc    584627 Mar  1 03:30 pilot3.tar.gz
[2026-03-02 13:39:09] -rwx------. 1 boinc boinc     36322 Mar  1 03:32 runpilot2-wrapper.sh
[2026-03-02 13:39:09] -rw-r--r--. 1 boinc boinc      5111 Mar  1 03:33 queuedata.json
[2026-03-02 13:39:09] -rw-r--r--. 1 boinc boinc       100 Mar  2 12:33 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-02 13:39:09] -rwxr-xr-x. 1 boinc boinc      7986 Mar  2 12:33 run_atlas
[2026-03-02 13:39:09] -rw-r--r--. 1 boinc boinc       105 Mar  2 12:33 job.xml
[2026-03-02 13:39:09] -rw-r--r--. 1 boinc boinc      6703 Mar  2 12:33 init_data.xml
[2026-03-02 13:39:09] -rw-r--r--. 2 boinc boinc 189577441 Mar  2 12:33 EVNT.48700936._000066.pool.root.1
[2026-03-02 13:39:09] drwxrwx--x. 2 boinc boinc      4096 Mar  2 12:33 shared
[2026-03-02 13:39:09] -rw-r--r--. 2 boinc boinc    597932 Mar  2 12:33 input.tar.gz
[2026-03-02 13:39:09] -rw-r--r--. 2 boinc boinc     15845 Mar  2 12:33 start_atlas.sh
[2026-03-02 13:39:09] -rw-r--r--. 1 boinc boinc         0 Mar  2 12:33 boinc_lockfile
[2026-03-02 13:39:09] -rw-r--r--. 1 boinc boinc      2499 Mar  2 12:33 pandaJob.out
[2026-03-02 13:39:09] -rw-------. 1 boinc boinc    998151 Mar  2 12:33 agis_schedconf.cvmfs.json
[2026-03-02 13:39:09] -rw-------. 1 boinc boinc   1513015 Mar  2 12:33 agis_ddmendpoints.agis.ALL.json
[2026-03-02 13:39:09] -rw-------. 1 boinc boinc       441 Mar  2 12:33 workernode_map.json
[2026-03-02 13:39:09] drwx------. 5 boinc boinc      4096 Mar  2 12:33 pilot3
[2026-03-02 13:39:09] -rw-------. 1 boinc boinc 149497743 Mar  2 13:37 HITS.48700938._001324.pool.root.1
[2026-03-02 13:39:09] -rw-r--r--. 1 boinc boinc       529 Mar  2 13:37 boinc_task_state.xml
[2026-03-02 13:39:09] -rw-------. 1 boinc boinc      1028 Mar  2 13:38 memory_monitor_summary.json
[2026-03-02 13:39:09] -rw-------. 1 boinc boinc    269384 Mar  2 13:38 log.48700938._001324.job.log.tgz.1
[2026-03-02 13:39:09] -rw-------. 1 boinc boinc      6338 Mar  2 13:38 heartbeat.json
[2026-03-02 13:39:09] -rw-------. 1 boinc boinc        95 Mar  2 13:38 pilot_heartbeat.json
[2026-03-02 13:39:09] -rw-r--r--. 1 boinc boinc      8192 Mar  2 13:39 boinc_mmap_file
[2026-03-02 13:39:09] -rw-r--r--. 1 boinc boinc        27 Mar  2 13:39 wrapper_checkpoint.txt
[2026-03-02 13:39:09] -rw-------. 1 boinc boinc      6441 Mar  2 13:39 pilotlog.txt
[2026-03-02 13:39:09] -rw-------. 1 boinc boinc    577089 Mar  2 13:39 log.48700938._001324.job.log.1
[2026-03-02 13:39:09] -rw-------. 1 boinc boinc       357 Mar  2 13:39 output.list
[2026-03-02 13:39:09] -rw-r--r--. 1 boinc boinc       620 Mar  2 13:39 runtime_log
[2026-03-02 13:39:09] -rw-------. 1 boinc boinc    860160 Mar  2 13:39 result.tar.gz
[2026-03-02 13:39:09] -rw-r--r--. 1 boinc boinc      9204 Mar  2 13:39 runtime_log.err
[2026-03-02 13:39:09] -rw-------. 1 boinc boinc       661 Mar  2 13:39 g0ELDmPmlG9n9Rq4apOajLDm4fhM0noT9bVooX4SDmCu6KDmwyxQvm.diag
[2026-03-02 13:39:09] -rw-r--r--. 1 boinc boinc     22067 Mar  2 13:39 stderr.txt
[2026-03-02 13:39:09] HITS file was successfully produced:
[2026-03-02 13:39:09] -rw-------. 1 boinc boinc 149497743 Mar  2 13:37 shared/HITS.pool.root.1
[2026-03-02 13:39:09]  *** Contents of shared directory: ***
[2026-03-02 13:39:09] total 332580
[2026-03-02 13:39:09] -rw-r--r--. 2 boinc boinc 189577441 Mar  2 12:33 ATLAS.root_0
[2026-03-02 13:39:09] -rw-r--r--. 2 boinc boinc    597932 Mar  2 12:33 input.tar.gz
[2026-03-02 13:39:09] -rw-r--r--. 2 boinc boinc     15845 Mar  2 12:33 start_atlas.sh
[2026-03-02 13:39:09] -rw-------. 1 boinc boinc 149497743 Mar  2 13:37 HITS.pool.root.1
[2026-03-02 13:39:09] -rw-------. 1 boinc boinc    860160 Mar  2 13:39 result.tar.gz
13:39:11 (3860678): run_atlas exited; CPU time 14859.904631
13:39:11 (3860678): called boinc_finish(0)

</stderr_txt>
]]>

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