Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:54:53 (2475860): wrapper (7.7.26015): starting
16:54:53 (2475860): wrapper: running run_atlas (--nthreads 4)
[2026-03-01 16:54:53] Arguments: --nthreads 4
[2026-03-01 16:54:53] Threads: 4
[2026-03-01 16:54:53] Checking for CVMFS
[2026-03-01 16:54:53] No cvmfs_config command found, will try listing directly
[2026-03-01 16:54:53] CVMFS is ok
[2026-03-01 16:54:53] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-01 16:54:53] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-01 16:54:53] Further information can be found at the LHC@home message board.
[2026-03-01 16:54:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-01 16:54:53] Checking for apptainer binary...
[2026-03-01 16:54:53] which: no apptainer in ((null))
[2026-03-01 16:54:53] apptainer is not installed, using version from CVMFS
[2026-03-01 16:54:53] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-01 16:54:53] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot24/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut06.grid.cesnet.cz
[2026-03-01 16:54:53] apptainer works
[2026-03-01 16:54:53] Set ATHENA_PROC_NUMBER=4
[2026-03-01 16:54:53] Set ATHENA_CORE_NUMBER=4
[2026-03-01 16:54:53] Starting ATLAS job with PandaID=7034262453
[2026-03-01 16:54:53] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot24/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-01 19:31:35]  *** The last 200 lines of the pilot log: ***
[2026-03-01 19:31:35] 2026-03-01 18:30:46,984 | INFO     | intersect: 2388784757.7005067
[2026-03-01 19:31:35] 2026-03-01 18:30:46,984 | INFO     | chi2: 0.010311784085369943
[2026-03-01 19:31:35] 2026-03-01 18:30:46,984 | INFO     | current chi2=0.010311784085369943 (change=99.21773044112571 %)
[2026-03-01 19:31:35] 2026-03-01 18:30:46,984 | INFO     | sum of square deviations: 906703512.0
[2026-03-01 19:31:35] 2026-03-01 18:30:46,985 | INFO     | sum of deviations: 50344275.99999985
[2026-03-01 19:31:35] 2026-03-01 18:30:46,985 | INFO     | mean x: 1772385480.0
[2026-03-01 19:31:35] 2026-03-01 18:30:46,985 | INFO     | mean y: 2325031.867132867
[2026-03-01 19:31:35] 2026-03-01 18:30:46,985 | INFO     | intersect: -96085818.65079498
[2026-03-01 19:31:35] 2026-03-01 18:30:46,985 | INFO     | chi2: 0.0069424013030432805
[2026-03-01 19:31:35] 2026-03-01 18:30:46,986 | INFO     | current chi2=0.0069424013030432805 (change=32.675071107307645 %)
[2026-03-01 19:31:35] 2026-03-01 18:30:46,986 | INFO     | sum of square deviations: 814878534.5
[2026-03-01 19:31:35] 2026-03-01 18:30:46,986 | INFO     | sum of deviations: 1312439308.5
[2026-03-01 19:31:35] 2026-03-01 18:30:46,987 | INFO     | mean x: 1772385632.5
[2026-03-01 19:31:35] 2026-03-01 18:30:46,987 | INFO     | mean y: 2322932.427536232
[2026-03-01 19:31:35] 2026-03-01 18:30:46,987 | INFO     | intersect: -2852272538.4679303
[2026-03-01 19:31:35] 2026-03-01 18:30:46,987 | INFO     | chi2: 0.0033436832371020113
[2026-03-01 19:31:35] 2026-03-01 18:30:46,987 | INFO     | current chi2=0.0033436832371020113 (change=51.836791174312125 %)
[2026-03-01 19:31:35] 2026-03-01 18:30:46,987 | INFO     | sum of square deviations: 729472282.0
[2026-03-01 19:31:35] 2026-03-01 18:30:46,988 | INFO     | sum of deviations: 1968179762.0
[2026-03-01 19:31:35] 2026-03-01 18:30:46,988 | INFO     | mean x: 1772385785.0
[2026-03-01 19:31:35] 2026-03-01 18:30:46,988 | INFO     | mean y: 2321788.3759398498
[2026-03-01 19:31:35] 2026-03-01 18:30:46,988 | INFO     | intersect: -4779729454.104967
[2026-03-01 19:31:35] 2026-03-01 18:30:46,989 | INFO     | chi2: 0.00028320453888337684
[2026-03-01 19:31:35] 2026-03-01 18:30:46,989 | INFO     | current chi2=0.00028320453888337684 (change=91.5301624346201 %)
[2026-03-01 19:31:35] 2026-03-01 18:30:46,989 | INFO     | sum of square deviations: 650252192.0
[2026-03-01 19:31:35] 2026-03-01 18:30:46,990 | INFO     | sum of deviations: 1612838780.0
[2026-03-01 19:31:35] 2026-03-01 18:30:46,990 | INFO     | mean x: 1772385937.5
[2026-03-01 19:31:35] 2026-03-01 18:30:46,990 | INFO     | mean y: 2322471.65625
[2026-03-01 19:31:35] 2026-03-01 18:30:46,990 | INFO     | intersect: -4393776162.528217
[2026-03-01 19:31:35] 2026-03-01 18:30:46,990 | INFO     | chi2: 0.00022894319363625192
[2026-03-01 19:31:35] 2026-03-01 18:30:46,990 | INFO     | current chi2=0.00022894319363625192 (change=19.159772460239292 %)
[2026-03-01 19:31:35] 2026-03-01 18:30:46,990 | INFO     | left removable region: 50
[2026-03-01 19:31:35] 2026-03-01 18:30:46,990 | INFO     | sum of square deviations: 282974608.0
[2026-03-01 19:31:35] 2026-03-01 18:30:46,991 | INFO     | sum of deviations: 418179278.0
[2026-03-01 19:31:35] 2026-03-01 18:30:46,991 | INFO     | mean x: 1772386517.0
[2026-03-01 19:31:35] 2026-03-01 18:30:46,991 | INFO     | mean y: 2325029.711340206
[2026-03-01 19:31:35] 2026-03-01 18:30:46,991 | INFO     | intersect: -2616904021.454956
[2026-03-01 19:31:35] 2026-03-01 18:30:46,991 | INFO     | chi2: 2.8696295794428557e-05
[2026-03-01 19:31:35] 2026-03-01 18:30:46,992 | INFO     | current memory leak: 1.48 B/s (using 97 data points, chi2=0.00)
[2026-03-01 19:31:35] 2026-03-01 18:30:46,992 | INFO     | could have reported an average CPU frequency of 2541 MHz (9 samples)
[2026-03-01 19:31:35] 2026-03-01 18:30:46,992 | INFO     | ..............................
[2026-03-01 19:31:35] 2026-03-01 18:30:46,992 | INFO     | . Timing measurements:
[2026-03-01 19:31:35] 2026-03-01 18:30:46,992 | INFO     | . get job = 0 s
[2026-03-01 19:31:35] 2026-03-01 18:30:46,992 | INFO     | . initial setup = 6 s
[2026-03-01 19:31:35] 2026-03-01 18:30:46,992 | INFO     | . payload setup = 6 s
[2026-03-01 19:31:35] 2026-03-01 18:30:46,992 | INFO     | . stage-in = 0 s
[2026-03-01 19:31:35] 2026-03-01 18:30:46,993 | INFO     | . payload execution = 9308 s
[2026-03-01 19:31:35] 2026-03-01 18:30:46,993 | INFO     | . stage-out = 0 s
[2026-03-01 19:31:35] 2026-03-01 18:30:46,993 | INFO     | . log creation = 0 s
[2026-03-01 19:31:35] 2026-03-01 18:30:46,993 | INFO     | ..............................
[2026-03-01 19:31:35] 2026-03-01 18:30:47,079 | INFO     | 
[2026-03-01 19:31:35] 2026-03-01 18:30:47,079 | INFO     | job summary report
[2026-03-01 19:31:35] 2026-03-01 18:30:47,079 | INFO     | --------------------------------------------------
[2026-03-01 19:31:35] 2026-03-01 18:30:47,079 | INFO     | PanDA job id: 7034262453
[2026-03-01 19:31:35] 2026-03-01 18:30:47,079 | INFO     | task id: 48700938
[2026-03-01 19:31:35] 2026-03-01 18:30:47,079 | INFO     | errors: (none)
[2026-03-01 19:31:35] 2026-03-01 18:30:47,079 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-01 19:31:35] 2026-03-01 18:30:47,079 | INFO     | pilot state: finished 
[2026-03-01 19:31:35] 2026-03-01 18:30:47,079 | INFO     | transexitcode: 0
[2026-03-01 19:31:35] 2026-03-01 18:30:47,079 | INFO     | exeerrorcode: 0
[2026-03-01 19:31:35] 2026-03-01 18:30:47,080 | INFO     | exeerrordiag: 
[2026-03-01 19:31:35] 2026-03-01 18:30:47,080 | INFO     | exitcode: 0
[2026-03-01 19:31:35] 2026-03-01 18:30:47,080 | INFO     | exitmsg: OK
[2026-03-01 19:31:35] 2026-03-01 18:30:47,080 | INFO     | cpuconsumptiontime: 34804 s
[2026-03-01 19:31:35] 2026-03-01 18:30:47,080 | INFO     | nevents: 400
[2026-03-01 19:31:35] 2026-03-01 18:30:47,080 | INFO     | neventsw: 0
[2026-03-01 19:31:35] 2026-03-01 18:30:47,080 | INFO     | pid: 2484941
[2026-03-01 19:31:35] 2026-03-01 18:30:47,080 | INFO     | pgrp: 2484941
[2026-03-01 19:31:35] 2026-03-01 18:30:47,080 | INFO     | corecount: 4
[2026-03-01 19:31:35] 2026-03-01 18:30:47,080 | INFO     | event service: False
[2026-03-01 19:31:35] 2026-03-01 18:30:47,080 | INFO     | sizes: {0: 2281770, 1: 2282231, 12: 2282231, 9318: 2310520, 9320: 2319540, 9321: 2319982}
[2026-03-01 19:31:35] 2026-03-01 18:30:47,080 | INFO     | --------------------------------------------------
[2026-03-01 19:31:35] 2026-03-01 18:30:47,080 | INFO     | 
[2026-03-01 19:31:35] 2026-03-01 18:30:47,081 | INFO     | executing command: ls -lF /scratch/boinc/var/slot24/slots/0
[2026-03-01 19:31:35] 2026-03-01 18:30:47,086 | INFO     | time since job start (9333s) is within the limit (349056.0s)
[2026-03-01 19:31:35] 2026-03-01 18:30:47,100 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-01 19:31:35] 2026-03-01 18:30:47,100 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-01 19:31:35] 2026-03-01 18:30:47,100 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-01 19:31:35] 2026-03-01 18:30:47,100 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-01 19:31:35] 2026-03-01 18:30:47,100 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-01 19:31:35] 2026-03-01 18:30:47,100 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-01 19:31:35] 2026-03-01 18:30:47,101 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-01 19:31:35] 2026-03-01 18:30:47,101 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-01 19:31:35] 2026-03-01 18:30:47,101 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-01 19:31:35] 2026-03-01 18:30:47,101 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-01 19:31:35] 2026-03-01 18:30:47,101 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-01 19:31:35] 2026-03-01 18:30:47,101 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-01 19:31:35] 2026-03-01 18:30:47,101 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-01 19:31:35] 2026-03-01 18:30:47,101 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-01 19:31:35] 2026-03-01 18:30:47,101 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-01 19:31:35] 2026-03-01 18:30:47,101 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-01 19:31:35] 2026-03-01 18:30:47,101 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-01 19:31:35] 2026-03-01 18:30:47,101 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-01 19:31:35] 2026-03-01 18:30:47,101 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-01 19:31:35] 2026-03-01 18:30:47,102 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-01 19:31:35] 2026-03-01 18:30:47,102 | INFO     | job 7034262453 has completed (purged errors)
[2026-03-01 19:31:35] 2026-03-01 18:30:47,102 | INFO     | overall cleanup function is called
[2026-03-01 19:31:35] 2026-03-01 18:30:48,109 | INFO     | --- collectZombieJob: --- 10, [2484941]
[2026-03-01 19:31:35] 2026-03-01 18:30:48,109 | INFO     | zombie collector waiting for pid 2484941
[2026-03-01 19:31:35] 2026-03-01 18:30:48,109 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-01 19:31:35] 2026-03-01 18:30:48,109 | INFO     | collected zombie processes
[2026-03-01 19:31:35] 2026-03-01 18:30:48,109 | INFO     | will attempt to kill all subprocesses of pid=2484941
[2026-03-01 19:31:35] 2026-03-01 18:30:48,446 | INFO     | process IDs to be killed: [2484941] (in reverse order)
[2026-03-01 19:31:35] 2026-03-01 18:30:48,556 | WARNING  | found no corresponding commands to process id(s)
[2026-03-01 19:31:35] 2026-03-01 18:30:48,557 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-01 19:31:35] 2026-03-01 18:30:48,569 | INFO     | did not find any defunct processes belonging to 2484941
[2026-03-01 19:31:35] 2026-03-01 18:30:48,582 | INFO     | did not find any defunct processes belonging to 2484941
[2026-03-01 19:31:35] 2026-03-01 18:30:48,582 | INFO     | ready for new job
[2026-03-01 19:31:35] 2026-03-01 18:30:48,582 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-01 19:31:35] 2026-03-01 18:30:48,584 | INFO     | **************************************
[2026-03-01 19:31:35] 2026-03-01 18:30:48,584 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-01 19:31:35] 2026-03-01 18:30:48,584 | INFO     | **************************************
[2026-03-01 19:31:35] 2026-03-01 18:30:48,584 | INFO     | 
[2026-03-01 19:31:35] 2026-03-01 18:30:48,588 | INFO     | architecture information:
[2026-03-01 19:31:35] 2026-03-01 18:30:48,588 | INFO     | executing command: cat /etc/os-release
[2026-03-01 19:31:35] 2026-03-01 18:30:48,603 | INFO     | cat /etc/os-release:
[2026-03-01 19:31:35] NAME="CentOS Linux"
[2026-03-01 19:31:35] VERSION="7 (Core)"
[2026-03-01 19:31:35] ID="centos"
[2026-03-01 19:31:35] ID_LIKE="rhel fedora"
[2026-03-01 19:31:35] VERSION_ID="7"
[2026-03-01 19:31:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-01 19:31:35] ANSI_COLOR="0;31"
[2026-03-01 19:31:35] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-01 19:31:35] HOME_URL="https://www.centos.org/"
[2026-03-01 19:31:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-01 19:31:35] 
[2026-03-01 19:31:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-01 19:31:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-01 19:31:35] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-01 19:31:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-01 19:31:35] 
[2026-03-01 19:31:35] 2026-03-01 18:30:48,603 | INFO     | **************************************
[2026-03-01 19:31:35] 2026-03-01 18:30:49,106 | INFO     | executing command: df -mP /scratch/boinc/var/slot24/slots/0
[2026-03-01 19:31:35] 2026-03-01 18:30:49,122 | INFO     | sufficient remaining disk space (677977784320 B)
[2026-03-01 19:31:35] 2026-03-01 18:30:49,122 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-01 19:31:35] 2026-03-01 18:30:49,122 | INFO     | current server update state: UPDATING_FINAL
[2026-03-01 19:31:35] 2026-03-01 18:30:49,122 | INFO     | update_server=False
[2026-03-01 19:31:35] 2026-03-01 18:30:49,122 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-01 19:31:35] 2026-03-01 18:30:49,123 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-01 19:31:35] 2026-03-01 18:30:49,123 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-01 19:31:35] 2026-03-01 18:30:49,623 | WARNING  | process 2484941 can no longer be monitored (due to stat problems) - aborting
[2026-03-01 19:31:35] 2026-03-01 18:30:49,872 | INFO     | using path: /scratch/boinc/var/slot24/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-01 19:31:35] 2026-03-01 18:30:49,873 | INFO     | using path: /scratch/boinc/var/slot24/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-01 19:31:35] 2026-03-01 18:30:49,873 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-03-01 19:31:35] 2026-03-01 18:30:49,873 | WARNING  | maxPSS not found in memory monitor output
[2026-03-01 19:31:35] 2026-03-01 18:30:49,874 | INFO     | skipping file size check of payload stdout file (/scratch/boinc/var/slot24/slots/0/PanDA_Pilot-7034262453/payload.stdout) since it has not been created yet
[2026-03-01 19:31:35] 2026-03-01 18:30:49,874 | INFO     | executing command: df -mP /scratch/boinc/var/slot24/slots/0
[2026-03-01 19:31:35] 2026-03-01 18:30:49,888 | INFO     | sufficient remaining disk space (677977784320 B)
[2026-03-01 19:31:35] 2026-03-01 18:30:49,888 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-03-01 19:31:35] 2026-03-01 18:30:49,889 | INFO     | output file size check: skipping output file /scratch/boinc/var/slot24/slots/0/PanDA_Pilot-7034262453/HITS.48700938._001620.pool.root.1 since it does not exist
[2026-03-01 19:31:35] 2026-03-01 18:30:50,119 | INFO     | all data control threads have been joined
[2026-03-01 19:31:35] 2026-03-01 18:30:50,127 | INFO     | [job] retrieve thread has finished
[2026-03-01 19:31:35] 2026-03-01 18:30:50,232 | INFO     | number of running child processes to parent process 2484941: 1
[2026-03-01 19:31:35] 2026-03-01 18:30:50,232 | INFO     | maximum number of monitored processes: 6
[2026-03-01 19:31:35] 2026-03-01 18:30:50,232 | INFO     | aborting job monitoring since job object (job id=7034262453) has expired
[2026-03-01 19:31:35] 2026-03-01 18:30:50,233 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-01 19:31:35] 2026-03-01 18:30:50,233 | INFO     | will abort loop
[2026-03-01 19:31:35] 2026-03-01 18:30:50,341 | INFO     | all job control threads have been joined
[2026-03-01 19:31:35] 2026-03-01 18:30:50,415 | INFO     | all payload control threads have been joined
[2026-03-01 19:31:35] 2026-03-01 18:30:50,482 | INFO     | job.realtimelogging is not enabled
[2026-03-01 19:31:35] 2026-03-01 18:30:50,739 | INFO     | [job] validate thread has finished
[2026-03-01 19:31:35] 2026-03-01 18:30:50,864 | INFO     | [payload] failed_post thread has finished
[2026-03-01 19:31:35] 2026-03-01 18:30:51,076 | INFO     | [payload] execute_payloads thread has finished
[2026-03-01 19:31:35] 2026-03-01 18:30:51,122 | INFO     | [payload] validate_pre thread has finished
[2026-03-01 19:31:35] 2026-03-01 18:30:51,124 | INFO     | [data] control thread has finished
[2026-03-01 19:31:35] 2026-03-01 18:30:51,128 | INFO     | [data] copytool_out thread has finished
[2026-03-01 19:31:35] 2026-03-01 18:30:51,181 | INFO     | [data] copytool_in thread has finished
[2026-03-01 19:31:35] 2026-03-01 18:30:51,237 | INFO     | [job] job monitor thread has finished
[2026-03-01 19:31:35] 2026-03-01 18:30:51,346 | INFO     | [job] control thread has finished
[2026-03-01 19:31:35] 2026-03-01 18:30:51,351 | INFO     | [job] create_data_payload thread has finished
[2026-03-01 19:31:35] 2026-03-01 18:30:51,420 | INFO     | [payload] control thread has finished
[2026-03-01 19:31:35] 2026-03-01 18:30:51,487 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-01 19:31:35] 2026-03-01 18:30:51,543 | INFO     | [payload] validate_post thread has finished
[2026-03-01 19:31:35] 2026-03-01 18:30:52,089 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-01 19:31:35] 2026-03-01 18:30:53,094 | INFO     | [job] queue monitor thread has finished
[2026-03-01 19:31:35] 2026-03-01 18:30:53,128 | INFO     | [data] queue_monitor thread has finished
[2026-03-01 19:31:35] 2026-03-01 18:31:20,582 | INFO     | PID=2480213 has CPU usage=7.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-01 19:31:35] 2026-03-01 18:31:20,582 | INFO     | .. there are 13 such processes running
[2026-03-01 19:31:35] 2026-03-01 18:31:20,583 | INFO     | found 0 job(s) in 20 queues
[2026-03-01 19:31:35] 2026-03-01 18:31:20,583 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-01 19:31:35] 2026-03-01 18:31:20,584 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-01 19:31:35] 2026-03-01 18:31:29,564 | INFO     | [monitor] cgroup control has ended
[2026-03-01 19:31:35] 2026-03-01 18:31:29,965 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23142450276160)>', '<ExcThread(monitor, started 23142205753088)>']
[2026-03-01 19:31:35] 2026-03-01 18:31:30,633 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-01 19:31:35] 2026-03-01 18:31:30,633 | INFO     | [monitor] control thread has ended
[2026-03-01 19:31:35] 2026-03-01 18:31:34,990 | INFO     | all workflow threads have been joined
[2026-03-01 19:31:35] 2026-03-01 18:31:34,990 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-01 19:31:35] 2026-03-01 18:31:34,990 | INFO     | traces error code: 0
[2026-03-01 19:31:35] 2026-03-01 18:31:34,991 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-01 19:31:35] 2026-03-01 18:31:35,114 [wrapper] ==== pilot stdout END ====
[2026-03-01 19:31:35] 2026-03-01 18:31:35,116 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-01 19:31:35] 2026-03-01 18:31:35,119 [wrapper] pilotpid: 2480213
[2026-03-01 19:31:35] 2026-03-01 18:31:35,121 [wrapper] Pilot exit status: 0
[2026-03-01 19:31:35] 2026-03-01 18:31:35,131 [wrapper] pandaids: 7034262453
[2026-03-01 19:31:35] 2026-03-01 18:31:35,199 [wrapper] cleanup supervisor_pilot 2647979 2480214
[2026-03-01 19:31:35] 2026-03-01 18:31:35,202 [wrapper] Test setup, not cleaning
[2026-03-01 19:31:35] 2026-03-01 18:31:35,204 [wrapper] apfmon messages muted
[2026-03-01 19:31:35] 2026-03-01 18:31:35,207 [wrapper] ==== wrapper stdout END ====
[2026-03-01 19:31:35] 2026-03-01 18:31:35,209 [wrapper] ==== wrapper stderr END ====
[2026-03-01 19:31:35]  *** Error codes and diagnostics ***
[2026-03-01 19:31:35]     "exeErrorCode": 0,
[2026-03-01 19:31:35]     "exeErrorDiag": "",
[2026-03-01 19:31:35]     "pilotErrorCode": 0,
[2026-03-01 19:31:35]     "pilotErrorDiag": "",
[2026-03-01 19:31:35]  *** Listing of results directory ***
[2026-03-01 19:31:35] total 337920
[2026-03-01 19:31:35] -rw-r--r-- 1 boinc boinc    584627 Mar  1 05:23 pilot3.tar.gz
[2026-03-01 19:31:35] -rwx------ 1 boinc boinc     36322 Mar  1 05:23 runpilot2-wrapper.sh
[2026-03-01 19:31:35] -rw-r--r-- 1 boinc boinc      5111 Mar  1 05:24 queuedata.json
[2026-03-01 19:31:35] -rw-r--r-- 1 boinc boinc       100 Mar  1 16:54 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-01 19:31:35] -rwxr-xr-x 1 boinc boinc      7986 Mar  1 16:54 run_atlas
[2026-03-01 19:31:35] -rw-r--r-- 1 boinc boinc       105 Mar  1 16:54 job.xml
[2026-03-01 19:31:35] -rw-r--r-- 2 boinc boinc 190415910 Mar  1 16:54 EVNT.48700936._000078.pool.root.1
[2026-03-01 19:31:35] -rw-r--r-- 1 boinc boinc      6637 Mar  1 16:54 init_data.xml
[2026-03-01 19:31:35] -rw-r--r-- 2 boinc boinc     15845 Mar  1 16:54 start_atlas.sh
[2026-03-01 19:31:35] drwxrwx--x 2 boinc boinc      4096 Mar  1 16:54 shared
[2026-03-01 19:31:35] -rw-r--r-- 2 boinc boinc    597936 Mar  1 16:54 input.tar.gz
[2026-03-01 19:31:35] -rw-r--r-- 1 boinc boinc         0 Mar  1 16:54 boinc_lockfile
[2026-03-01 19:31:35] -rw-r--r-- 1 boinc boinc      2499 Mar  1 16:54 pandaJob.out
[2026-03-01 19:31:35] -rw------- 1 boinc boinc    998184 Mar  1 16:55 agis_schedconf.cvmfs.json
[2026-03-01 19:31:35] -rw------- 1 boinc boinc   1513015 Mar  1 16:55 agis_ddmendpoints.agis.ALL.json
[2026-03-01 19:31:35] -rw------- 1 boinc boinc       452 Mar  1 16:55 workernode_map.json
[2026-03-01 19:31:35] drwx------ 5 boinc boinc      4096 Mar  1 16:55 pilot3
[2026-03-01 19:31:35] -rw------- 1 boinc boinc 148334819 Mar  1 19:30 HITS.48700938._001620.pool.root.1
[2026-03-01 19:31:35] -rw-r--r-- 1 boinc boinc       529 Mar  1 19:30 boinc_task_state.xml
[2026-03-01 19:31:35] -rw------- 1 boinc boinc      1032 Mar  1 19:30 memory_monitor_summary.json
[2026-03-01 19:31:35] -rw------- 1 boinc boinc    344511 Mar  1 19:30 log.48700938._001620.job.log.tgz.1
[2026-03-01 19:31:35] -rw------- 1 boinc boinc      6397 Mar  1 19:30 heartbeat.json
[2026-03-01 19:31:35] -rw-r--r-- 1 boinc boinc      8192 Mar  1 19:31 boinc_mmap_file
[2026-03-01 19:31:35] -rw-r--r-- 1 boinc boinc        27 Mar  1 19:31 wrapper_checkpoint.txt
[2026-03-01 19:31:35] -rw------- 1 boinc boinc        95 Mar  1 19:31 pilot_heartbeat.json
[2026-03-01 19:31:35] -rw------- 1 boinc boinc      6443 Mar  1 19:31 pilotlog.txt
[2026-03-01 19:31:35] -rw------- 1 boinc boinc   1329848 Mar  1 19:31 log.48700938._001620.job.log.1
[2026-03-01 19:31:35] -rw------- 1 boinc boinc       357 Mar  1 19:31 output.list
[2026-03-01 19:31:35] -rw-r--r-- 1 boinc boinc       620 Mar  1 19:31 runtime_log
[2026-03-01 19:31:35] -rw------- 1 boinc boinc   1689600 Mar  1 19:31 result.tar.gz
[2026-03-01 19:31:35] -rw-r--r-- 1 boinc boinc      9204 Mar  1 19:31 runtime_log.err
[2026-03-01 19:31:35] -rw------- 1 boinc boinc       662 Mar  1 19:31 ifLLDmLWnG9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmnq8KDmtBTern.diag
[2026-03-01 19:31:35] -rw-r--r-- 1 boinc boinc     21338 Mar  1 19:31 stderr.txt
[2026-03-01 19:31:35] HITS file was successfully produced:
[2026-03-01 19:31:35] -rw------- 1 boinc boinc 148334819 Mar  1 19:30 shared/HITS.pool.root.1
[2026-03-01 19:31:35]  *** Contents of shared directory: ***
[2026-03-01 19:31:35] total 333076
[2026-03-01 19:31:35] -rw-r--r-- 2 boinc boinc 190415910 Mar  1 16:54 ATLAS.root_0
[2026-03-01 19:31:35] -rw-r--r-- 2 boinc boinc     15845 Mar  1 16:54 start_atlas.sh
[2026-03-01 19:31:35] -rw-r--r-- 2 boinc boinc    597936 Mar  1 16:54 input.tar.gz
[2026-03-01 19:31:35] -rw------- 1 boinc boinc 148334819 Mar  1 19:30 HITS.pool.root.1
[2026-03-01 19:31:35] -rw------- 1 boinc boinc   1689600 Mar  1 19:31 result.tar.gz
19:31:36 (2475860): run_atlas exited; CPU time 35131.584781
19:31:36 (2475860): called boinc_finish(0)

</stderr_txt>
]]>

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